Strain Data

A big image opens when the thumbnail is clicked.(nies-0708.jpg)

Strain number		NIES-708
Phylum		Cryptophyta
Class		Cryptophyceae
Scientific name		Chroomonas nordstedtii Hansgirg
Synonym
Former name
Common name
Locality (Date of collection)		Hokkaido University, Sapporo, Hokkaido, Japan (1987-09-24)
Latitude / Longitude
Habitat (Isolation source)		Freshwater (Pond water)
History		< Erata, Mayumi
Isolator (Date of isolation)		Erata, Mayumi (1987-09-25)
Identified by		Erata, Mayumi
State of strain		Subculture; Unialgal; Clonal; Non-axenic
Culture condition (Preculture condition)		Medium: AF-6 Temperature: 15 C Light intensity: 9-10 µmol photons/m²/sec, L/D cycle: 10L:14D Duration: 1 M
Gene information		18S rRNA ( AB240962 HG328378 HG328386 ) , 28S rRNA ( HE820916 ) , Nuclear actin ( AB126023 )
Cell size (min - max)		- 12 μm
Organization		Unicellular; Flagellate
Characteristics
Other strain no.		Other strain no. : #00324
Remarks
Movie

Reference
Cunningham, B. R., Greenwold, M. J., Lachenmyer, E. M., Heidenreich, K, M., Davis, A. C., Dudycha, J. L., Richardson, T. L. 2019 Light capture and pigment diversity in marine and freshwater cryptophytes. J. Phycol., 55, 552-564. Strain(s): 697, 698, 701, 702, 708 PubMed: 30468692 DOI: 10.1111/jpy.12816 Hoef-Emden, K. 2018 Revision of the genus Chroomonas HANSGIRG: The benefits of DNA-containing specimens. Protist, 169, 662-681. Keywords: Chroomonas; novel species; phylogeny; ancient DNA; revision; Cryptophyceae Strain(s): 708, 712, 1004 PubMed: 30125802 DOI: 10.1016/j.protis.2018.04.005 Mitani, E., Nakayama, F., Matsuwaki, I., Ichi, I., Kawabata, A., Kawachi, M., Kato, M. 2017 Fatty acid composition profiles of 235 strains of three microalgal divisions within the NIES Microbial Culture Collection. Microb. Resour. Syst., 33, 19-29. Keywords: Cryptophyta; docosahexaenoic acid; eicosapentaenoic acid; fatty acid; Haptophyta; Heterokontophyta; microalgae Strain(s): 1, 8, 9, 14, 15, 17, 71, 115, 223, 225, 233, 234, 265, 274, 275, 276, 277, 278, 279, 280, 281, 282, 284, 293, 323, 324, 330, 333, 344, 345, 346, 347, 348, 350, 353, 372, 377, 388, 391, 395, 407, 408, 409, 413, 414, 417, 461, 462, 466, 487, 534, 548, 553, 556, 557, 558, 559, 560, 562, 587, 588, 589, 590, 603, 605, 622, 623, 695, 696, 697, 698, 699, 700, 701, 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714, 715, 716, 741, 765, 766, 767, 805, 837, 997, 1001, 1002, 1003, 1004, 1005, 1006, 1007, 1009, 1011, 1016, 1017, 1044, 1045, 1046, 1047, 1302, 1303, 1324, 1327, 1330, 1339, 1340, 1349, 1353, 1370, 1375, 1376, 1379, 1383, 1384, 1385, 1386, 1387, 1391, 1392, 1393, 1395, 1398, 1399, 1400, 1401, 1699, 1700, 1730, 1813, 1815, 1816, 1826, 1827, 1831, 1862, 1863, 1864, 1865, 1874, 1963, 1964, 1965, 1974, 1975, 1976, 2142, 2143, 2144, 2145, 2147, 2148, 2300, 2331, 2332, 2351, 2363, 2364, 2365, 2369, 2370, 2376, 2506, 2533, 2534, 2535, 2536, 2537, 2590, 2633, 2668, 2689, 2690, 2691, 2693, 2694, 2696, 2697, 2707, 2716, 2717, 2718, 2720, 2722, 2723, 2725, 2726, 2729, 2730, 2731, 2732, 2770, 2771, 2772, 2773, 2839, 2840, 2841, 2842, 2843, 2844, 2859, 2872, 2878, 2890, 2899, 3391, 3689, 3690, 3691 Hoef-Emden, K. 2014 Osmotolerance in the Cryptophyceae: Jacks-of-all-trades in the Chroomonas clade. Protist, 165, 123-143. Keywords: Chroomonas; contractile vacuole; cryptomonads; floridoside; osmolarity; osmoregulation; osmotolerance; phylogeny Strain(s): 708, 712, 713, 714, 1004 PubMed: 24568876 DOI: 10.1016/j.protis.2014.01.001 Hoef-Emden, K. 2012 Pitfalls of establishing DNA barcoding systems in protists: the cryptophyceae as a test case. PLoS One, 7, e43652 (article ID). Strain(s): 274, 706, 708, 711, 712, 713, 714, 1004, 1370 PubMed: 22970104 DOI: 10.1371/journal.pone.0043652 Tanifuji, G., Onodera, N., Hara, Y. 2010 Nucleomorph genome diversity and its phylogenetic implications in cryptomonad algae. Phycol. Res., 58, 230-237. Keywords: cryptomonads; endosymbiosis; evolution; genome reduction; nucleomorph; phylogeny Strain(s): 274, 277, 280, 697, 699, 701, 702, 704, 708, 712, 715, 765 DOI: 10.1111/j.1440-1835.2010.00580.x Tanifuji, G., Erata, M., Ishida, K-I., Onodera, N., Hara, Y. 2006 Diversity of secondary endosymbiont-derived actin-coding genes in cryptomonads and their evolutionary implications. J. Plant Res., 119, 205-215. Keywords: Cryptomonads; Nucleomorph; Symbiotic gene reorganization; Symbiont actin gene Strain(s): 697, 700, 701, 702, 708, 712, 765 PubMed: 16570126 DOI: 10.1007/s10265-006-0263-5 Erata, M. & Chihara, M. 1991 Cryptomonads of Japan (2) three species of Chroomonas. J. Jpn. Bot., 66, 7-11. Strain(s): 706, 707, 708, 709, 710, 712, 713, 714, 727

Reference

Cunningham, B. R., Greenwold, M. J., Lachenmyer, E. M., Heidenreich, K, M., Davis, A. C., Dudycha, J. L., Richardson, T. L. 2019 Light capture and pigment diversity in marine and freshwater cryptophytes. J. Phycol., 55, 552-564.
Strain(s): 697, 698, 701, 702, 708
PubMed: 30468692
DOI: 10.1111/jpy.12816

Hoef-Emden, K. 2018 Revision of the genus Chroomonas HANSGIRG: The benefits of DNA-containing specimens. Protist, 169, 662-681.
Keywords: Chroomonas; novel species; phylogeny; ancient DNA; revision; Cryptophyceae
Strain(s): 708, 712, 1004
PubMed: 30125802
DOI: 10.1016/j.protis.2018.04.005

Mitani, E., Nakayama, F., Matsuwaki, I., Ichi, I., Kawabata, A., Kawachi, M., Kato, M. 2017 Fatty acid composition profiles of 235 strains of three microalgal divisions within the NIES Microbial Culture Collection. Microb. Resour. Syst., 33, 19-29.
Keywords: Cryptophyta; docosahexaenoic acid; eicosapentaenoic acid; fatty acid; Haptophyta; Heterokontophyta; microalgae
Strain(s): 1, 8, 9, 14, 15, 17, 71, 115, 223, 225, 233, 234, 265, 274, 275, 276, 277, 278, 279, 280, 281, 282, 284, 293, 323, 324, 330, 333, 344, 345, 346, 347, 348, 350, 353, 372, 377, 388, 391, 395, 407, 408, 409, 413, 414, 417, 461, 462, 466, 487, 534, 548, 553, 556, 557, 558, 559, 560, 562, 587, 588, 589, 590, 603, 605, 622, 623, 695, 696, 697, 698, 699, 700, 701, 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714, 715, 716, 741, 765, 766, 767, 805, 837, 997, 1001, 1002, 1003, 1004, 1005, 1006, 1007, 1009, 1011, 1016, 1017, 1044, 1045, 1046, 1047, 1302, 1303, 1324, 1327, 1330, 1339, 1340, 1349, 1353, 1370, 1375, 1376, 1379, 1383, 1384, 1385, 1386, 1387, 1391, 1392, 1393, 1395, 1398, 1399, 1400, 1401, 1699, 1700, 1730, 1813, 1815, 1816, 1826, 1827, 1831, 1862, 1863, 1864, 1865, 1874, 1963, 1964, 1965, 1974, 1975, 1976, 2142, 2143, 2144, 2145, 2147, 2148, 2300, 2331, 2332, 2351, 2363, 2364, 2365, 2369, 2370, 2376, 2506, 2533, 2534, 2535, 2536, 2537, 2590, 2633, 2668, 2689, 2690, 2691, 2693, 2694, 2696, 2697, 2707, 2716, 2717, 2718, 2720, 2722, 2723, 2725, 2726, 2729, 2730, 2731, 2732, 2770, 2771, 2772, 2773, 2839, 2840, 2841, 2842, 2843, 2844, 2859, 2872, 2878, 2890, 2899, 3391, 3689, 3690, 3691

Hoef-Emden, K. 2014 Osmotolerance in the Cryptophyceae: Jacks-of-all-trades in the Chroomonas clade. Protist, 165, 123-143.
Keywords: Chroomonas; contractile vacuole; cryptomonads; floridoside; osmolarity; osmoregulation; osmotolerance; phylogeny
Strain(s): 708, 712, 713, 714, 1004
PubMed: 24568876
DOI: 10.1016/j.protis.2014.01.001

Hoef-Emden, K. 2012 Pitfalls of establishing DNA barcoding systems in protists: the cryptophyceae as a test case. PLoS One, 7, e43652 (article ID).
Strain(s): 274, 706, 708, 711, 712, 713, 714, 1004, 1370
PubMed: 22970104
DOI: 10.1371/journal.pone.0043652

Tanifuji, G., Onodera, N., Hara, Y. 2010 Nucleomorph genome diversity and its phylogenetic implications in cryptomonad algae. Phycol. Res., 58, 230-237.
Keywords: cryptomonads; endosymbiosis; evolution; genome reduction; nucleomorph; phylogeny
Strain(s): 274, 277, 280, 697, 699, 701, 702, 704, 708, 712, 715, 765
DOI: 10.1111/j.1440-1835.2010.00580.x

Tanifuji, G., Erata, M., Ishida, K-I., Onodera, N., Hara, Y. 2006 Diversity of secondary endosymbiont-derived actin-coding genes in cryptomonads and their evolutionary implications. J. Plant Res., 119, 205-215.
Keywords: Cryptomonads; Nucleomorph; Symbiotic gene reorganization; Symbiont actin gene
Strain(s): 697, 700, 701, 702, 708, 712, 765
PubMed: 16570126
DOI: 10.1007/s10265-006-0263-5

Erata, M. & Chihara, M. 1991 Cryptomonads of Japan (2) three species of Chroomonas. J. Jpn. Bot., 66, 7-11.
Strain(s): 706, 707, 708, 709, 710, 712, 713, 714, 727

Unauthorized copying and replication of text, images, and tables in our homepage, are prohibited.