Strain Data

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Strain number		NIES-764
Phylum		Glaucophyta
Class		Glaucophyceae
Scientific name		Cyanophora sudae Tos.Takah. & Nozaki
Synonym
Former name		Cyanophora tetracyanea Korshikov
Common name
Locality (Date of collection)		Yoshino Park, Mitsukaido, Ibaraki, Japan (1987-01-17)
Latitude / Longitude		36.075731 / 140.001211
Habitat (Isolation source)		Freshwater (Soil)
History		< Suda, Shoichiro
Isolator (Date of isolation)		Suda, Shoichiro (1991-08-24)
Identified by		Takahashi, Toshiyuki
State of strain		Subculture; Unialgal; Clonal; Axenic[2018 Dec]
Culture condition (Preculture condition)		Medium: CSi Temperature: 20 C Light intensity: 6 µmol photons/m²/sec, L/D cycle: 10L:14D Duration: 2 M
Gene information		Plastid DNA ( MG601102 ) , Mitochondrial DNA ( MT919637 ) , 16S rRNA ( LN735196 ) , 18S rRNA ( KF631375 ) , 18S-ITS1-5.8S-ITS2 ( KF631373 ) , ITS1-5.8S-ITS2 ( AB973925 ) , CO1 ( KF631391 ) , cob ( KF631341 ) , psbA ( KF631321 ) , psaB ( AB973453 ) , rbcL ( KF631392 )
Cell size (min - max)		- 15 μm
Organization
Characteristics		Authentic strain (Takahashi et al. 2014) ; Genome decoded strain (Reyes-Prieto et al, 2018;（ Russell et al. 2021)
Other strain no.		Other strain no. : S118
Remarks		Axenic
Movie

Reference
Russell, S., Jackson, C., Reyes-Prieto, A. 2021 High sequence divergence but limited architectural rearrangements in organelle genomes of Cyanophora (Glaucophyta) species. J. Eukaryot. Microbiol., 68, e12831 (article ID). Keywords: Archaeplastida; genomic distance; glauco-phytes; mitochondria; organelle genomics; plastid; substitution rates Strain(s): 763, 764 PubMed: 33142007 DOI: 10.1111/jeu.12831 Sumiya, N. 2021 Coordination mechanism of cell and cyanelle division in the glaucophyte alga Cyanophora sudae. Protoplasma, 259, 855–867. Keywords: Cyanelle division; Glaucophyte; Cell cycle; Cyanophora Strain(s): 764 PubMed: 34553240 DOI: 10.1007/s00709-021-01704-3 Reyes-Prieto, A., Russell, S., Figueroa-Martinez, F., Jackson, C. 2018 Chapter Four - Comparative Plastid Genomics of Glaucophytes. In Plastid Genome Evolution - Advances in Botanical Research, Eds. by Chaw, S.-M., Jansen, R. K., Academic press 85, pp. 95-127. Keywords: Glaucophyta; Cyanophora; Glaucocystis; Archaeplastida; Plastid; Plastid genome; HGT Strain(s): 763, 764 DOI: 10.1016/bs.abr.2017.11.012 Price, D. C., Steiner, J. M., Yoon, H. S., Bhattacharya, D., Löffelhardt, W. 2017 Glaucophyta In Handbook of the protists, 2nd ed. , Eds. by Archibald, J. M., Simpson, A. G. B., Slamovits, C. H., Springer, pp. 1-65. Keywords: Archaeplastida; Cyanophora paradoxa; Muroplasts; Single primary endosymbiotic event; Phylogenomics; Carbon-concentrating mechanism; Eukaryotic peptidoglycan; Phycobilisomes Strain(s): 547, 763, 764, 966, 1369, 1961, 2141, 3645 DOI: 10.1007/978-3-319-32669-6_42-1 Decelle, J., Romac, S., Stern, R. F., Bendif, E., Zingone, A., Audic, S., Guiry, M. D., Guillou, L., Tessier, D., Le Gall, F., Gourvil, P., Dos Santos, A. L., Probert, I., Vaulot, D., de Vargas, C., Christen, R. 2015 PhytoREF: a reference database of the plastidial 16S rRNAgene of photosynthetic eukaryotes with curated taxonomy. Mol. Ecol. Resour., 15, 1435-1445. Keywords: high-throughput sequencing; metabarcoding; photosynthesis; phytoplankton; plastidial 16S rRNA gene; protists Strain(s): 763, 764, 2565 PubMed: 25740460 DOI: 10.1111/1755-0998.12401 Chong, J., Jackson, C., Kim, J. I., Yoon, H. S., Reyes-Prieto, A. 2014 Molecular markers from different genomic compartments reveal cryptic diversity within glaucophyte species. Mol. Phylogenet. Evol., 76, 181-188. Keywords: Glaucophyta; Cyanophora; Glaucocystis; Cryptic species diversity; Archaeplastida Strain(s): 763, 764, 966, 1369, 1961 PubMed: 24680917 DOI: 10.1016/j.ympev.2014.03.019 Takahashi, T., Sato, M., Toyooka, K., Matsuzaki, R., Kawafune, K., Kawamura, M., Okuda,K., Nozaki, H. 2014 Five Cyanophora (Cyanophorales, Glaucophyta) species delineated based on morphological and molecular data. J. Phycol., 50, 1058-1069. Keywords: Cyanophora; field-emission scanning electron microscopy; freeze-fracture method; Glaucophyta; molecular phylogeny; morphology; new species; secondary structure of nuclear rDNA ITS-2; taxonomy; ultrastructure Strain(s): 547, 763, 764, 3645 PubMed: 26988787 DOI: 10.1111/jpy.12236 Hamana, K. & Niitsu, M. 2006 Cellular polyamines of lower eukaryotes belonging to the phyla Glaucophyta, Rhodophyta, Cryptophyta, Haptophyta and Percolozoa. J. Gen. Appl. Microbiol., 52, 235-240. Keywords: Cryptophyta; Glaucophyta; Haptophyta; Perclozoa; polyamine; Rhodophyta Strain(s): 8, 274, 276, 277, 282, 353, 388, 699, 706, 715, 741, 763, 764, 1016, 1017, 1032, 1036, 1332, 1441, 1456, 1457, 1462, 1463, 1467, 1473, 3377 PubMed: 17116972 DOI: 10.2323/jgam.52.235

Reference

Russell, S., Jackson, C., Reyes-Prieto, A. 2021 High sequence divergence but limited architectural rearrangements in organelle genomes of Cyanophora (Glaucophyta) species. J. Eukaryot. Microbiol., 68, e12831 (article ID).
Keywords: Archaeplastida; genomic distance; glauco-phytes; mitochondria; organelle genomics; plastid; substitution rates
Strain(s): 763, 764
PubMed: 33142007
DOI: 10.1111/jeu.12831

Sumiya, N. 2021 Coordination mechanism of cell and cyanelle division in the glaucophyte alga Cyanophora sudae. Protoplasma, 259, 855–867.
Keywords: Cyanelle division; Glaucophyte; Cell cycle; Cyanophora
Strain(s): 764
PubMed: 34553240
DOI: 10.1007/s00709-021-01704-3

Reyes-Prieto, A., Russell, S., Figueroa-Martinez, F., Jackson, C. 2018 Chapter Four - Comparative Plastid Genomics of Glaucophytes. In Plastid Genome Evolution - Advances in Botanical Research, Eds. by Chaw, S.-M., Jansen, R. K., Academic press 85, pp. 95-127.
Keywords: Glaucophyta; Cyanophora; Glaucocystis; Archaeplastida; Plastid; Plastid genome; HGT
Strain(s): 763, 764
DOI: 10.1016/bs.abr.2017.11.012

Price, D. C., Steiner, J. M., Yoon, H. S., Bhattacharya, D., Löffelhardt, W. 2017 Glaucophyta In Handbook of the protists, 2nd ed. , Eds. by Archibald, J. M., Simpson, A. G. B., Slamovits, C. H., Springer, pp. 1-65.
Keywords: Archaeplastida; Cyanophora paradoxa; Muroplasts; Single primary endosymbiotic event; Phylogenomics; Carbon-concentrating mechanism; Eukaryotic peptidoglycan; Phycobilisomes
Strain(s): 547, 763, 764, 966, 1369, 1961, 2141, 3645
DOI: 10.1007/978-3-319-32669-6_42-1

Decelle, J., Romac, S., Stern, R. F., Bendif, E., Zingone, A., Audic, S., Guiry, M. D., Guillou, L., Tessier, D., Le Gall, F., Gourvil, P., Dos Santos, A. L., Probert, I., Vaulot, D., de Vargas, C., Christen, R. 2015 PhytoREF: a reference database of the plastidial 16S rRNAgene of photosynthetic eukaryotes with curated taxonomy. Mol. Ecol. Resour., 15, 1435-1445.
Keywords: high-throughput sequencing; metabarcoding; photosynthesis; phytoplankton; plastidial 16S rRNA gene; protists
Strain(s): 763, 764, 2565
PubMed: 25740460
DOI: 10.1111/1755-0998.12401

Chong, J., Jackson, C., Kim, J. I., Yoon, H. S., Reyes-Prieto, A. 2014 Molecular markers from different genomic compartments reveal cryptic diversity within glaucophyte species. Mol. Phylogenet. Evol., 76, 181-188.
Keywords: Glaucophyta; Cyanophora; Glaucocystis; Cryptic species diversity; Archaeplastida
Strain(s): 763, 764, 966, 1369, 1961
PubMed: 24680917
DOI: 10.1016/j.ympev.2014.03.019

Takahashi, T., Sato, M., Toyooka, K., Matsuzaki, R., Kawafune, K., Kawamura, M., Okuda,K., Nozaki, H. 2014 Five Cyanophora (Cyanophorales, Glaucophyta) species delineated based on morphological and molecular data. J. Phycol., 50, 1058-1069.
Keywords: Cyanophora; field-emission scanning electron microscopy; freeze-fracture method; Glaucophyta; molecular phylogeny; morphology; new species; secondary structure of nuclear rDNA ITS-2; taxonomy; ultrastructure
Strain(s): 547, 763, 764, 3645
PubMed: 26988787
DOI: 10.1111/jpy.12236

Hamana, K. & Niitsu, M. 2006 Cellular polyamines of lower eukaryotes belonging to the phyla Glaucophyta, Rhodophyta, Cryptophyta, Haptophyta and Percolozoa. J. Gen. Appl. Microbiol., 52, 235-240.
Keywords: Cryptophyta; Glaucophyta; Haptophyta; Perclozoa; polyamine; Rhodophyta
Strain(s): 8, 274, 276, 277, 282, 353, 388, 699, 706, 715, 741, 763, 764, 1016, 1017, 1032, 1036, 1332, 1441, 1456, 1457, 1462, 1463, 1467, 1473, 3377
PubMed: 17116972
DOI: 10.2323/jgam.52.235

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