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Strain Data
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| Strain number | NIES-653 | |||
|---|---|---|---|---|
| Phylum | Chlorophyta | |||
| Class | Chlorophyceae | |||
| Scientific name | Gonium quadratum Pringsheim ex Nozaki | |||
| Synonym | Gonium quadratum E.G.Pringsheim 1959 | |||
| Former name | ||||
| Common name | Green alga | |||
| Locality (Date of collection) | Itahari, Nepal (1989-10-**) | |||
| Latitude / Longitude | ||||
| Habitat (Isolation source) | Freshwater (Paddy soil) | |||
| History | < Nozaki, Hisayoshi | |||
| Isolator (Date of isolation) | Nozaki, Hisayoshi (1990-04-23) | |||
| Identified by | Nozaki, Hisayoshi | |||
| State of strain | Subculture; Unialgal; Clonal; Axenic[2018 Mar] | |||
|
Culture condition (Preculture condition) |
Medium:
AF-6
Temperature: 20 C Light intensity: 9-14 µmol photons/m2/sec, L/D cycle: 10L:14D Duration: 2 M |
|||
| Gene information | atpB ( AB014019 ) , rbcL ( D63438 ) , psaA ( AB044243 ) , psaB ( AB044464 ) , psbC ( AB044522 AB044523 ) | |||
| Cell size (min - max) | ||||
| Organization | Colonial; Flagellate | |||
| Characteristics | Phototaxis ; Heterothallic ; Isogamous ; Mating type (+) ; Crosses with NIES-652 ; F1 strains (NIES-647, 648, 649, 650) | |||
| Other strain no. | Other strain no. : 90-423-2 | |||
| Remarks | Axenic | |||
| Movie | ||||
| Reference |
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Yamagishi, S., Yamamoto, K., Takahashi, K., Kawai-Toyooka, H., Suzuki, S., Matsuzaki, R., Yamaguchi, H., Kawachi, M., Higashiyama, T., Nozaki, H.
2024
Evolutionary analysis of MID homologs during the transition from homothallic species to heterothallic species in Volvox sect. Volvox (Chlorophyceae).
Phycol. Res.,
72,
46-55.
Keywords: male gamete; mating system; minus dominance gene (MID); molecular evolution; sex; sperm packet; volvocine green algae Strain(s): 289, 456, 460, 541, 544, 545, 569, 572, 574, 582, 652, 653, 654, 732, 851, 852, 857, 872, 891, 892, 1362, 1363, 1708, 1710, 1859, 2457, 2569, 2735, 2736, 2740, 3382, 3383, 3780, 3782, 3786, 3874, 3984, 3986, 3988, 4021, 4025, 4336, 4432, 4535, 4536, 4537 DOI: 10.1111/pre.12538 Nozaki, H., Mori, F., Tanaka, Y., Matsuzaki, R., Yamaguchi, H., Kawachi, M. 2022 Cryopreservation of vegetative cells and zygotes of the multicellular volvocine green alga Gonium pectorale. BMC Microbiol., 22, 103 (article ID). Strain(s): 288, 290, 468, 469, 569, 570, 645, 646, 652, 653, 654, 655, 737, 851, 852, 885, 2261, 2263, 4121, 4499, 4500, 4501, 4502 PubMed: 35421922 DOI: 10.1186/s12866-022-02519-9 Lindsey, C. R., Rosenzweing, F., Herron, M. D. 2021 Phylotranscriptomics points to multiple independent origins of multicellularity and cellular differentiation in the volvocine algae. BMC Biol., 19, 182 (article ID). Keywords: Phylotranscriptomics; Volvocine algae; Green algae; Phylogeny; Multicellularity Strain(s): 418, 456, 458, 460, 541, 543, 544, 564, 566, 568, 572, 582, 653, 654, 717, 719, 720, 722, 725, 728, 730, 732, 736, 737, 851, 856, 863, 867, 868, 878, 882, 890, 893, 895, 1362, 1363, 2569, 2863, 3383, 4126, 4127, 4128 DOI: 10.1101/2021.03.16.435725 Hanschen, E. R., Herron, M. D., Wiens, J. J., Nozaki, H., Michod, R. E. 2018 Repeated evolution and reversibilityof self-fertilization in the volvocinegreen algae. Evolution, 72, 386-398. Keywords: Haploid; phylogenetics; self-fertilization; sex; sexual reproduction; volvocine green algae Strain(s): 289, 418, 456, 458, 460, 541, 543, 544, 545, 564, 566, 568, 569, 571, 572, 574, 578, 582, 653, 732, 851, 856, 857, 872, 875, 876, 877, 878, 880, 882, 883, 891, 892, 1038, 1362, 1711, 1713, 2457, 2569, 2738, 3382, 3388, 3780, 3782 PubMed: 29134623 DOI: 10.1111/evo.13394 Hanschen, E. R., Herron, M. D., Wiens, J. J., Nozaki, H., Michod, R. E. 2018 Multicellularity drives the evolution of sexual traits. Am. Nat., 192, E93-E10. Keywords: sex; volvocine green algae; multicellularity; ancestral state; reconstruction; anisogamy; sexual dimorphism Strain(s): 289, 418, 421, 456, 458, 460, 522, 541, 543, 544, 545, 564, 566, 568, 569, 571, 572, 574, 578, 582, 653, 732, 751, 851, 856, 857, 872, 875, 876, 877, 878, 880, 882, 883, 891, 892, 1038, 1362, 1711, 1713, 2457, 2569, 2738, 3382, 3388, 3780, 3782 PubMed: 30125231 DOI: 10.1086/698301 Hanschen, E. R., Davison, D. R., Ferris, P. J., Michod, R. E. 2018 On the rediscovery of Volvox perglobator (Volvocales, Chlorophyceae) and the evolution of outcrossing from self-fertilization. Evol. Ecol. Res., 19, 299-318. Keywords: homothallism; phylogenetics; reversion; self-fertilization; sexual reproduction; volvocine green algae Strain(s): 289, 421, 456, 458, 460, 474, 522, 541, 543, 544, 545, 564, 566, 568, 569, 571, 572, 574, 578, 582, 653, 732, 751, 851, 856, 872, 876, 877, 878, 880, 882, 1038, 1122, 1140, 1148, 1156, 1157, 1362, 1708, 1711, 1713, 1859, 2457, 2569, 2738, 3382, 3388, 3780, 3782, 3986, 4145, 4258, 4259, 4260 Hamaji, T., Ferris, J. P., Nishii, I., Nishimura, Y., Nozaki, H. 2013 Distribution of the sex-determining geneMID and molecular correspondence of mating types within the isogamous genus Gonium (Volvocales, Chlorophyta). PLoS One, 8, e64385 (article ID). Strain(s): 652, 653, 654, 655, 851, 852, 1038, 1039, 1708, 1710, 1711, 2455, 2457 PubMed: 23696888 DOI: 10.1371/journal.pone.0064385 Yamada, T., Nakada, T., Miyaji, K., Nozaki, H. 2006 Morphology and molecular phylogeny of Gonium multicoccum (Volvocales, Chlorophyceae) newly found in Japan. J. Jpn. Bot., 81, 139-147. Keywords: Chlorophyceae; Gonium multicoccum; ITS2; rbcL; Volvocales Strain(s): 289, 569, 572, 653, 654, 851, 857, 1038, 1707, 1708, 1709, 1711, 1713 Mori, F., Erata, M., Watanabe, M. M. 2002 Cryopreservation of cyanobacteria and green algae in the NIES-Collection. Microbiol. Cult. Coll., 18, 45-55. Keywords: cryopreservation; cyanobacteria; green algae; FDA staining method; NIES-Collection Strain(s): 19, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 44, 45, 46, 50, 51, 52, 53, 54, 55, 56, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 73, 74, 75, 76, 77, 78, 79, 80, 81, 87, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 119, 120, 122, 123, 125, 127, 128, 129, 130, 131, 132, 133, 134, 135, 137, 138, 139, 144, 147, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 162, 163, 164, 165, 166, 167, 168, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 185, 186, 187, 188, 189, 191, 192, 193, 194, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 224, 226, 227, 228, 229, 230, 231, 232, 241, 242, 243, 244, 245, 246, 248, 257, 259, 261, 263, 266, 267, 268, 287, 288, 289, 290, 294, 295, 297, 298, 299, 300, 301, 302, 303, 305, 306, 308, 309, 310, 312, 313, 329, 334, 337, 338, 339, 340, 341, 342, 349, 351, 359, 360, 361, 362, 375, 378, 379, 380, 382, 384, 385, 390, 394, 396, 397, 398, 415, 416, 418, 419, 421, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 436, 437, 438, 439, 440, 446, 447, 448, 449, 450, 451, 452, 453, 454, 455, 456, 457, 458, 459, 460, 464, 468, 469, 474, 478, 479, 480, 481, 503, 504, 505, 506, 507, 509, 510, 512, 514, 515, 522, 523, 524, 527, 528, 529, 530, 531, 532, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545, 546, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 592, 593, 594, 595, 596, 597, 598, 604, 610, 628, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649, 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 672, 685, 686, 687, 688, 689, 690, 691, 692, 693, 694, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727, 728, 729 Nozaki, H., Onishi, K., Morita, E. 2002 Differences in pyrenoid morphology are correlated with differences in the rbcL genes of members of the Chloromonas lineage (Volvocales, Chlorophyceae). J. Mol. Evol., 55, 414-430. Keywords: ATP synthase β-subunit (atpB) gene; Chloromonas; gene evolution; large subunit of Rubisco (rbcL) gene; morphological evolution; P700 chlorophyll a-apoprotein A2 (psaB) gene; pyrenoid; Volvocales Strain(s): 96, 123, 144, 213, 418, 421, 425, 428, 432, 439, 446, 447, 456, 474, 522, 564, 566, 567, 569, 571, 574, 582, 653, 732, 851, 858, 861, 875, 882, 883, 968 PubMed: 12355262 DOI: 10.1007/s00239-002-2338-9 Nozaki, H., Misawa, K., Kajita, T., Kato, M., Nohara, S., Watanabe, M. M. 2000 Origin and evolution of the colonial Volvocales (Chlorophyceae) as inferred from multiple, chloroplast gene sequences. Mol. Phylogenet. Evol., 17, 256-268. Strain(s): 418, 456, 460, 474, 541, 545, 564, 566, 569, 571, 572, 574, 577, 582, 653, 654, 666, 720, 721, 722, 724, 725, 727, 728, 730, 731, 732, 734, 735, 736, 737, 851, 854, 872, 882, 884, 886, 887, 888, 889, 890, 893, 895, 896, 898 PubMed: 11083939 DOI: 10.1006/mpev.2000.0831 Nozaki, H., Ohta, N., Takano, H., Watanabe, M. M. 1999 Reexamination of phylogenetic relationships within the colonial Volvocales (Chlorophyta): an analysis of atpB and rbcL gene sequences. J. Phycol., 35, 104-112. Keywords: atpB gene; Chlorophyta; Gonium; molecular phylogeny; rbcL gene; Volvocaceae; volvocine series; Volvox Strain(s): 418, 456, 460, 541, 564, 566, 568, 569, 571, 572, 574, 577, 582, 653, 654, 666, 720, 721, 722, 724, 725, 727, 728, 730, 731, 732, 734, 735, 736, 737, 851, 852, 858, 861, 882, 884, 895 DOI: 10.1046/j.1529-8817.1999.3510104.x Nozaki, H., Ito, M., Sano, R., Uchida, H., Watanabe, M. M., Kuroiwa, T. 1995 Phylogenetic relationships within the colonial Volvocales (Chlorophyta) inferred from rbcL gene sequence data. J. Phycol., 31, 970-979. Keywords: Chlorophyta; Goniaceae; large subunit of ribulose-1,5-bisphosphate carboxylase / oxygenase (rbcL) gene; molecular phylogeny; Tetrabaenaceae; Volvocaceae Strain(s): 418, 421, 456, 460, 541, 564, 566, 569, 571, 572, 574, 577, 653, 725, 731, 732, 734, 735, 737, 895 DOI: 10.1111/j.0022-3646.1995.00970.x Nozaki, H., Kuroiwa, H., Kuroiwa, T. 1994 Light and electron microscopic characterization of two types of pyrenoids in Gonium (Goniaceae, Chlorophyta). J. Phycol., 30, 279-290. Keywords: Chlorophyta; electron microscopy; Goniaceae; Gonium pectorale; Gonium quadratum; immunogold electron microscopy; pyrenoid; ribulose-1,5-bisphosphate carboxylase / oxygenase (RuBisCO) taxonomy; thylakoid lamellae Strain(s): 468, 653 DOI: 10.1111/j.0022-3646.1994.00279.x Nozaki, H. 1993 Asexual and sexual reproduction in Gonium quadratum (Chlorophyta) with a discussion of phylogenetic relationships within the Goniaceae. J. Phycol., 29, 369-376. Keywords: asexual reproduction; Chlorophyta; Goniaceae; Gonium quadratum; mating papilla; phylogeny; sexual reproduction; zygote germination Strain(s): 651, 652, 653 DOI: 10.1111/j.0022-3646.1993.00369.x |
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