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Strain Data
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| Strain number | NIES-571 | |||
|---|---|---|---|---|
| Phylum | Chlorophyta | |||
| Class | Chlorophyceae | |||
| Scientific name | Tetrabaena socialis (Dujardin) Nozaki & Ito var. socialis | |||
| Synonym | Cryptomonas socialis Dujardin; Gonium sociale (Dujardin) Warming 1876; Tetrabaena dujardinii E.Fromentel 1874; Tetragonium lacustre West & G.S.West 1896 | |||
| Former name | ||||
| Common name | Green alga | |||
| Locality (Date of collection) | Kohoku-ku, Yokohama, Kanagawa, Japan (1982-08-24) | |||
| Latitude / Longitude | 35.528007 / 139.622842 | |||
| Habitat (Isolation source) | Freshwater (Pond sediment) | |||
| History | < Nozaki, Hisayoshi | |||
| Isolator (Date of isolation) | Nozaki, Hisayoshi (1982-10-28) | |||
| Identified by | Nozaki, Hisayoshi | |||
| State of strain | Cryopreservation; Unialgal; Clonal; Non-axenic[2018 Feb] | |||
|
Culture condition (Preculture condition) |
Medium:
AF-6
Temperature: 20 C Light intensity: 3-5 µmol photons/m2/sec, L/D cycle: 10L:14D Duration: 3 M |
|||
| Gene information | Whole-genome ( PRJNA393411 ) , 18S rRNA ( AB278626 LC086361 ) , atpB ( AB014014 ) , psaA ( AB044415 ) , psaB ( AB044466 ) , rbcL ( D63443 ) , psbC ( AB044525 ) | |||
| Cell size (min - max) | 7 - 12 μm | |||
| Organization | ||||
| Characteristics | Phototaxis ; Homothallic ; Isogamous ; Genome decoded strain (Featherston et al. 2017) | |||
| Other strain no. | Other strain no. : 21028-4 | |||
| Remarks | Cryopreserved | |||
| Movie | ||||
| Reference |
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Tanno, A., Tokutsu, R., Arakaki, Y., Ueki, N., Minagawa, J., Yoshimura, K., Hisabori, T., Nozaki, H., Wakabayashi, K.
2021
The four-celled Volvocales green alga Tetrabaena socialis exhibits weak photobehavior and high-photoprotection ability.
PLoS One,
16,
e0259138 (article ID).
Strain(s): 571 PubMed: 34699573 DOI: 10.1371/journal.pone.0259138 Yamashita, S. & Nozaki, H. 2019 Embryogenesis of flattened colonies implies the innovation required for the evolution of spheroidal colonies in volvocine green algae. BMC Evol. Biol., 19, 120 (article ID). Keywords: Multicellularity; Body plan; Embryogenesis; Volvocine green algae; Gonium; Tetrabaena Strain(s): 571, 4327 PubMed: 31185890 DOI: 10.1186/s12862-019-1452-x Widyaningrum, D., Iida, D., Tanabe, Y., Hayashi, Y., Kurniasih, S. D., Ohama, T. 2019 Acutely induced cell mortality in the unicellular green alga Chlamydomonas reinhardtii (Chlorophyceae) following exposure to acrylic resin nanoparticles. J. Phycol., 55, 118-133. Keywords: abnormal swimming behavior; cell mortality; cell wall damage; Chlamydomonas rein-hardtii; poly(isobutyl-cyanoacrylate) nanoparticles; ROS Strain(s): 35, 144, 362, 418, 421, 432, 438, 456, 545, 571, 732, 737, 858, 1022, 1048, 1848, 2150, 2169, 2201, 2202, 2208, 2209, 2212, 2280, 2352, 2462, 2578 PubMed: 30304548 DOI: 10.1111/jpy.12798 Nakada, T., Tsuchida, Y., Tomita, M. 2019 Improved taxon sampling and multigene phylogeny of unicellular chlamydomonads closely related to the colonial volvocalean lineage Tetrabaenaceae-Goniaceae-Volvocaceae (Volvocales, Chlorophyceae). Mol. Phylogenet. Evol., 130 1-8. Keywords: Alga; Chlamydomonas; Colony evolution; Multigene phylogeny; Vitreochlamys; Zoosporangium Strain(s): 418, 437, 456, 460, 474, 541, 544, 545, 564, 566, 569, 571, 577, 654, 666, 721, 725, 728, 735, 737, 867, 879, 880, 882, 883, 887, 1362, 1858, 2462, 2567, 3383, 3388, 4241, 4242, 4243, 4244, 4245, 4246, 4247, 4248, 4249, 4250, 4251, 4252, 4253, 4254, 4255, 4256 PubMed: 30266459 DOI: 10.1016/j.ympev.2018.09.013 Hanschen, E. R., Davison, D. R., Ferris, P. J., Michod, R. E. 2018 On the rediscovery of Volvox perglobator (Volvocales, Chlorophyceae) and the evolution of outcrossing from self-fertilization. Evol. Ecol. Res., 19, 299-318. Keywords: homothallism; phylogenetics; reversion; self-fertilization; sexual reproduction; volvocine green algae Strain(s): 289, 421, 456, 458, 460, 474, 522, 541, 543, 544, 545, 564, 566, 568, 569, 571, 572, 574, 578, 582, 653, 732, 751, 851, 856, 872, 876, 877, 878, 880, 882, 1038, 1122, 1140, 1148, 1156, 1157, 1362, 1708, 1711, 1713, 1859, 2457, 2569, 2738, 3382, 3388, 3780, 3782, 3986, 4145, 4258, 4259, 4260 Hanschen, E. R., Herron, M. D., Wiens, J. J., Nozaki, H., Michod, R. E. 2018 Multicellularity drives the evolution of sexual traits. Am. Nat., 192, E93-E10. Keywords: sex; volvocine green algae; multicellularity; ancestral state; reconstruction; anisogamy; sexual dimorphism Strain(s): 289, 418, 421, 456, 458, 460, 522, 541, 543, 544, 545, 564, 566, 568, 569, 571, 572, 574, 578, 582, 653, 732, 751, 851, 856, 857, 872, 875, 876, 877, 878, 880, 882, 883, 891, 892, 1038, 1362, 1711, 1713, 2457, 2569, 2738, 3382, 3388, 3780, 3782 PubMed: 30125231 DOI: 10.1086/698301 Featherston, J., Arakaki, Y., Hanschen, E. R., Ferris, PJ., Michod, R. E., Olson, B. J. S. C., Nozaki, H., Durand P. M. 2018 The 4-celled Tetrabaena socialis nuclear genome reveals the essential components for genetic control of cell number at the origin of multicellularity in the volvocine lineage. Mol. Biol. Evol., 35, 855-870. Keywords: Volvocines; multicellularity; Tetrabaena socialis; evolutionary genomics Strain(s): 571 PubMed: 29294063 DOI: 10.1093/molbev/msx332 Hanschen, E. R., Herron, M. D., Wiens, J. J., Nozaki, H., Michod, R. E. 2018 Repeated evolution and reversibilityof self-fertilization in the volvocinegreen algae. Evolution, 72, 386-398. Keywords: Haploid; phylogenetics; self-fertilization; sex; sexual reproduction; volvocine green algae Strain(s): 289, 418, 456, 458, 460, 541, 543, 544, 545, 564, 566, 568, 569, 571, 572, 574, 578, 582, 653, 732, 851, 856, 857, 872, 875, 876, 877, 878, 880, 882, 883, 891, 892, 1038, 1362, 1711, 1713, 2457, 2569, 2738, 3382, 3388, 3780, 3782 PubMed: 29134623 DOI: 10.1111/evo.13394 Arakaki, Y., Fujiwara, T., Kawai-Toyooka, H., Kawafune, K., Featherston, J., Durand, P. M., Miyagishima, S., Nozaki, H. 2017 Evolution of cytokinesis-related protein localization during the emergence of multicellularity in volvocine green algae. BMC Evol. Biol., 17, 243 (article ID). Keywords: Multicellularity; Volvocine algae; Tetrabaena socialis; DRP1 Strain(s): 571, 4121 PubMed: 29212441 DOI: 10.1186/s12862-017-1091-z Featherston, J., Arakaki, Y., Nozaki, H., Durand, P. M., Smith, D. R. 2016 Inflated organelle genomes and a circularmapping mtDNA probably existed at the origin of coloniality in volvocine green algae. Eur. J. Phycol., 51, 369-377. Keywords: Genome expansion; green microalga; mitochondrial DNA; plastid DNA; Tetrabaena socialis; Volvocine algae Strain(s): 571 DOI: 10.1080/09670262.2016.1198830 Nakada, T., Ito, T., Tomita, M. 2016 18S ribosomal RNA gene phylogeny of a colonial volvocalean lineage (Tetrabanaceae-Goniaceae-Volvocaceae, Volvocales, Chlorophyceae) and its close relatives. J. Jpn. Bot., 91, 345-354. Keywords: 18S rRNA; colonial; green algae; molecular phylogeny; unicellular; Volvocales Strain(s): 418, 456, 460, 474, 541, 544, 545, 564, 566, 571, 654, 666, 721, 725, 728, 735, 737, 867, 877, 879, 880, 881, 882, 883, 1362, 2242, 2246, 2266, 2567, 3388, 4126 Munakata, H., Nakada, T., Nakahigashi, K., Nozaki, H., Tomita, M. 2016 Phylogenetic position and molecular chronology of a colonial green flagellate, Stephanosphaera pluvialis (Volvocales, Chlorophyceae), among unicellular algae. J. Eucaryot. Microbiol., 63, 340-348. Keywords: Balticola; coloniality; divergence time; evolution; molecular phylogeny Strain(s): 123, 144, 421, 428, 432, 439, 446, 567, 569, 571, 656, 861, 887, 968, 1048, 2293, 2564, 4124, 4125 PubMed: 26595722 DOI: 10.1111/jeu.12283 Arakaki, Y., Kawai-Toyooka, H., Hamamura, Y., Higashiyama, T., Noga, A., Hirono, M., Olson, B. J. S. C., Nozaki, H. 2013 The simplest integrated multicellular organism unveiled. PLoS One, 8, e81641 (article ID). Strain(s): 571 PubMed: 24349103 DOI: 10.1371/journal.pone.0081641 Mori, F., Erata, M., Watanabe, M. M. 2002 Cryopreservation of cyanobacteria and green algae in the NIES-Collection. Microbiol. Cult. Coll., 18, 45-55. Keywords: cryopreservation; cyanobacteria; green algae; FDA staining method; NIES-Collection Strain(s): 19, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 44, 45, 46, 50, 51, 52, 53, 54, 55, 56, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 73, 74, 75, 76, 77, 78, 79, 80, 81, 87, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 119, 120, 122, 123, 125, 127, 128, 129, 130, 131, 132, 133, 134, 135, 137, 138, 139, 144, 147, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 162, 163, 164, 165, 166, 167, 168, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 185, 186, 187, 188, 189, 191, 192, 193, 194, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 224, 226, 227, 228, 229, 230, 231, 232, 241, 242, 243, 244, 245, 246, 248, 257, 259, 261, 263, 266, 267, 268, 287, 288, 289, 290, 294, 295, 297, 298, 299, 300, 301, 302, 303, 305, 306, 308, 309, 310, 312, 313, 329, 334, 337, 338, 339, 340, 341, 342, 349, 351, 359, 360, 361, 362, 375, 378, 379, 380, 382, 384, 385, 390, 394, 396, 397, 398, 415, 416, 418, 419, 421, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 436, 437, 438, 439, 440, 446, 447, 448, 449, 450, 451, 452, 453, 454, 455, 456, 457, 458, 459, 460, 464, 468, 469, 474, 478, 479, 480, 481, 503, 504, 505, 506, 507, 509, 510, 512, 514, 515, 522, 523, 524, 527, 528, 529, 530, 531, 532, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545, 546, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 592, 593, 594, 595, 596, 597, 598, 604, 610, 628, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649, 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 672, 685, 686, 687, 688, 689, 690, 691, 692, 693, 694, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727, 728, 729 Nozaki, H., Onishi, K., Morita, E. 2002 Differences in pyrenoid morphology are correlated with differences in the rbcL genes of members of the Chloromonas lineage (Volvocales, Chlorophyceae). J. Mol. Evol., 55, 414-430. Keywords: ATP synthase β-subunit (atpB) gene; Chloromonas; gene evolution; large subunit of Rubisco (rbcL) gene; morphological evolution; P700 chlorophyll a-apoprotein A2 (psaB) gene; pyrenoid; Volvocales Strain(s): 96, 123, 144, 213, 418, 421, 425, 428, 432, 439, 446, 447, 456, 474, 522, 564, 566, 567, 569, 571, 574, 582, 653, 732, 851, 858, 861, 875, 882, 883, 968 PubMed: 12355262 DOI: 10.1007/s00239-002-2338-9 Nozaki, H., Misawa, K., Kajita, T., Kato, M., Nohara, S., Watanabe, M. M. 2000 Origin and evolution of the colonial Volvocales (Chlorophyceae) as inferred from multiple, chloroplast gene sequences. Mol. Phylogenet. Evol., 17, 256-268. Strain(s): 418, 456, 460, 474, 541, 545, 564, 566, 569, 571, 572, 574, 577, 582, 653, 654, 666, 720, 721, 722, 724, 725, 727, 728, 730, 731, 732, 734, 735, 736, 737, 851, 854, 872, 882, 884, 886, 887, 888, 889, 890, 893, 895, 896, 898 PubMed: 11083939 DOI: 10.1006/mpev.2000.0831 Nozaki, H., Ohta, N., Takano, H., Watanabe, M. M. 1999 Reexamination of phylogenetic relationships within the colonial Volvocales (Chlorophyta): an analysis of atpB and rbcL gene sequences. J. Phycol., 35, 104-112. Keywords: atpB gene; Chlorophyta; Gonium; molecular phylogeny; rbcL gene; Volvocaceae; volvocine series; Volvox Strain(s): 418, 456, 460, 541, 564, 566, 568, 569, 571, 572, 574, 577, 582, 653, 654, 666, 720, 721, 722, 724, 725, 727, 728, 730, 731, 732, 734, 735, 736, 737, 851, 852, 858, 861, 882, 884, 895 DOI: 10.1046/j.1529-8817.1999.3510104.x Nozaki, H., Ito, M., Sano, R., Uchida, H., Watanabe, M. M., Kuroiwa, T. 1995 Phylogenetic relationships within the colonial Volvocales (Chlorophyta) inferred from rbcL gene sequence data. J. Phycol., 31, 970-979. Keywords: Chlorophyta; Goniaceae; large subunit of ribulose-1,5-bisphosphate carboxylase / oxygenase (rbcL) gene; molecular phylogeny; Tetrabaenaceae; Volvocaceae Strain(s): 418, 421, 456, 460, 541, 564, 566, 569, 571, 572, 574, 577, 653, 725, 731, 732, 734, 735, 737, 895 DOI: 10.1111/j.0022-3646.1995.00970.x Nozaki, H. & Ito, M. 1994 Phylogenetic relationships within the colonial Volvocales (Chlorophyta) inferred from cladistic analysis based on morphological data. J. Phycol., 30, 353-365. Keywords: Chlorophyta; cladistic analysis; Goniaceae; morphological data; phylogeny; sexual reproduction; Tetrabaena; Tetrabaenaceae fam. nov.; Tetrabaena socialis comb. nov.; Volvocaceae Strain(s): 456, 460, 541, 565, 571, 654 DOI: 10.1111/j.0022-3646.1994.00353.x Nozaki, H. & Ohtani, S. 1992 Gonium sociale (Volvocales, Chlorophyta) from Antarctica. Jpn. J. Phycol. (Sôrui), 40, 267-271. Keywords: Antarctica; Chlorophyta; culture; Gonium sociale; morphology; Volvocales Strain(s): 571, 691 Nozaki, H. 1986 Sexual reproduction in Gonium sociale (Chlorophyta, Volvocales). Phycologia, 25, 29-35. Strain(s): 571 DOI: 10.2216/i0031-8884-25-1-29.1 |
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