| Strain number | NIES-4060 | |||
|---|---|---|---|---|
| Phylum | Cercozoa | |||
| Class | Imbricatea | |||
| Scientific name | Paulinella micropora Lhee, Yang, Kim, Andersen & Yoon | |||
| Synonym | ||||
| Former name | ||||
| Common name | ||||
| Locality (Date of collection) | inside NIES Onogawa, Tsukuba Ibaraki Japan (2009-10-09) | |||
| Latitude / Longitude | 36.0485 / 140.1190 | |||
| Habitat (Isolation source) | Freshwater (Pond water) | |||
| History | < Nomura, Mami | |||
| Isolator (Date of isolation) | Nomura, Mami (2009-10-09) | |||
| Identified by | Nomura, Mami | |||
| State of strain | Subculture; Unialgal; Clonal; Non-axenic | |||
|
Culture condition (Preculture condition) |
Medium:
WHS
Temperature: 20 C Light intensity: 4-5 µmol photons/m2/sec, L/D cycle: 10L:14D Duration: 1 M |
|||
| Gene information | 16S RNA ( LC384071 ) , pmSL1 ( LC384070 ) , LASP1 ( LC384069 ) , Rab11 ( LC384068 ) , CypA ( LC384067 ) , PsbN ( LC384066 ) , hypothetical protein ( LC384065 ) , Rab1 ( LC384064 ) , Rac1 ( LC384063 ) , CALM ( LC384062 LC384061 ) , polyubiquitin ( LC383946 ) , actin ( LC383945 ) | |||
| Cell size (min - max) | 15 - 20 μm | |||
| Organization | Unicellular | |||
| Characteristics | Benthic | |||
| Other strain no. | Other strain no. : MYN1 | |||
| Remarks | ||||
| Movie | ||||
| Reference |
|---|
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Matsuo, M., Katahata, A., Satoh, S., Matsuzaki, M., Nomura, M., Ishida, K. I., Inagaki, Y., Obokata, J.
2018
Characterization of spliced leader transsplicing in a photosynthetic rhizarian amoeba, Paulinella micropora, and its possible role in functional gene transfer.
PLoS One,
13,
e0200961 (article ID).
Strain(s): 4060 PubMed: 30024971 DOI: 10.1371/journal.pone.0200961 Nomura, M., Ishida, K-I. 2016 Fine-structural observations on siliceous scale production and shell assembly in the testate amoeba Paulinella chromatophora. Protist, 167, 303-318. Keywords: Paulinella chromatophora; testate amoebae; siliceous scale production; silica deposition vesicle; shell construction; ultrastructure Strain(s): 4060 PubMed: 27348459 DOI: 10.1016/j.protis.2016.05.002 Nomura, M., Nakayama, T., Ishida, K-I. 2014 Detailed process of shell construction in the photosynthetic testate amoeba Paulinella chromatophora (Euglyphid, Rhizaria). J. Eucaryot. Microbiol., 61, 317-321. Keywords: cell covering; LysoTracker; protist; siliceous; scale; time-lapse video microscopy Strain(s): 4060 PubMed: 24444111 DOI: 10.1111/jeu.12102 |
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