Strain number | NIES-252 | |||
---|---|---|---|---|
Phylum | Chlorophyta | |||
Class | Nephroselmidophyceae | |||
Scientific name | Nephroselmis astigmatica Inouye & Pienaar | |||
Synonym | ||||
Former name | ||||
Common name | ||||
Locality (Date of collection) | Tateyama Port, Chiba, Japan (1983-08-10) | |||
Latitude / Longitude | 34.998 / 139.842 | |||
Habitat (Isolation source) | Marine (Seawater) | |||
History | < Inouye, Isao | |||
Isolator (Date of isolation) | Inouye, Isao (1983-08-10) | |||
Identified by | Inouye, Isao | |||
State of strain | Subculture; Unialgal; Clonal; Axenic[2018 Feb] | |||
Culture condition (Preculture condition) |
Medium:
f/2
;
ESM
Temperature: 20 C Light intensity: 13-16 µmol photons/m2/sec, L/D cycle: 10L:14D Duration: 42 D |
|||
Gene information | Plastid DNA ( KJ746600 ) , 18S rRNA ( AB158374 FN562433 ) , 16S-ITS1-tRNA-Ile-tRNA-Ala-23S ( FN563084 ) , 18S-ITS1-5.8S-ITS2-28S ( HE610145 ) | |||
Cell size (min - max) | - 8 μm | |||
Organization | Unicellular; Flagellate | |||
Characteristics | Red tide ; Genome decoded strain (Lemieux et al. 2014) | |||
Other strain no. | Other strain no. : 810-13 | |||
Remarks | Axenic | |||
Movie |
Reference |
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Lemieux, C., Otis, C.,Turmel, M.
2014
Six newly sequenced chloroplast genomes from prasinophyte green algae provide insights into the relationships among prasinophyte lineages and the diversity of streamlined genome architecture in picoplanktonic species.
BMC Evol. Biol.,
14,
857 (article ID).
Keywords: Viridiplantae; Prasinophytes; Prasinococcales; Picocystis; Picoplanktonic algae; Nephroselmis; Plastid genome; Phylogenomics; Genome reduction; trans-spliced group II intron Strain(s): 252 PubMed: 25281016 DOI: 10.1186/1471-2164-15-857 Marin, B. 2012 Nested in the Chlorellales or independent class? Phylogeny and classification of the Pedinophyceae (Viridiplantae) revealed by molecular phylogenetic analyses of complete nuclear and plastid-encoded rRNA operons. Protist, 163, 778-805. Keywords: Marsupiomonadales; Marsupiomonas; Pedinomonas; Pedinophyceae; Resultor; Resultomonas Strain(s): 252, 483 PubMed: 22192529 DOI: 10.1016/j.protis.2011.11.004 Lepere, C., Demura, M., Kawachi, M., Romac, S., Probert, I., Vaulot, D. 2011 Whole-genome amplification (WGA) of marine photosynthetic eukaryote populations. FEMS Microbiol. Ecol., 76, 513-523. Keywords: whole-genome amplification; photosynthetic; microbial eukaryote; flow cytometry sorting; rRNA genes Strain(s): 252, 1411 PubMed: 21348885 DOI: 10.1111/j.1574-6941.2011.01072.x Marin, B., Melkonian, M. 2010 Molecular phylogeny and classification of the Mamiellophyceae class. nov. (Chlorophyta) based on sequence comparisons of the nuclear- and plastid-encoded rRNA operons. Protist, 161, 304-336. Keywords: prasinophytes; SSU rDNA; LSU rDNA; ITS2; systematics; freshwater; Monomastigales; Dolichomastigales; Mamiellales; Monomastigaceae; Dolichomastigaceae; Crustomastigaceae; Bathycoccaceae Strain(s): 252, 255, 360, 483 PubMed: 20005168 DOI: 10.1016/j.protis.2009.10.002 Alamsjah, M. A., Hirao, S., Ishibashi, F., Oda, T., Fujita, Y. 2008 Algicidal activity of polyunsaturated fatty acids derived from Ulva fasciata and U. pertusa (Ulvaceae, Chlorophyta) on phytoplankton. J. Appl. Phycol., 20, 713-720. Keywords: Algicidal compound; Red tide phytoplankton; Ulva fasciata; Ulva pertusa Strain(s): 1, 3, 7, 221, 251, 252, 254, 359, 381, 462, 486 DOI: 10.1007/s10811-007-9257-5 Nakayama, T., Suda, S., Kawachi, M., Inouye, I. 2007 Phylogeny and ultrastructure of Nephroselmis and Pseudoscourfieldia (Chlorophyta), including the description of Nephroselmis anterostigmatica sp. nov. and a proposal for the Nephroselmidales ord. nov. Phycologia, 46, 680-697. Keywords: 18S rDNA; hair scales; Nephroselmidales ord nov.; Nephroselmis anterostigmatica sp. nov.; phylogeny; Prasinophyceae; Pseudoscourfieldia marina; taxonomy; ultrastructure Strain(s): 252, 935 DOI: 10.2216/04-25.1 Yoshii, Y., Takaichi, S., Maoka, T., Suda, S., Sekiguchi, H., Nakayama, T., Inouye, I. 2005 Variation of siphonaxanthin series among the genus Nephroselmis (Prasinophyceae, Chlorophyta), including a novel primary methoxy carotenoid. J. Phycol., 41, 827-834. Keywords: carotenoids; methylation; Nephroselmis; photosynthetic antenna system; Prasinophyceae; siphonaxanthin series Strain(s): 252, 483, 486, 934, 935, 2309 DOI: 10.1111/j.1529-8817.2005.00103.x |
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