| Strain number | NIES-3712 | |||
|---|---|---|---|---|
| Phylum | Heterokontophyta | |||
| Class | Bacillariophyceae | |||
| Scientific name | Chaetoceros setoensis Ikari | |||
| Synonym | ||||
| Former name | ||||
| Common name | Centric diatom | |||
| Locality (Date of collection) | Itsukaichi Fishing Port, Hiroshima Bay, Hiroshima, Japan (2007-03-16) | |||
| Latitude / Longitude | 34.35533333 / 132.35803333 | |||
| Habitat (Isolation source) | Marine (Seawater) | |||
| History | < Kimura, Kei < Tomaru, Yuji | |||
| Isolator (Date of isolation) | Tomaru, Yuji (2007-03-16) | |||
| Identified by | Suzuki, Hidekazu; Nagumo, Tamotsu | |||
| State of strain | Subculture; Unialgal; Clonal; Non-axenic | |||
|
Culture condition (Preculture condition) |
Medium:
mSWM-3
Temperature: 15 C Light intensity: 9-11 µmol photons/m2/sec, L/D cycle: 10L:14D Duration: 21 D |
|||
| Gene information | 18S rRNA ( AB847418 ) | |||
| Cell size (min - max) | ||||
| Organization | Unicellular | |||
| Characteristics | Red tide ; The virus which infects with this diatom strain has been reported (Tomaru et al. 2013). | |||
| Other strain no. | Other strain no. : IT07-C11 | |||
| Remarks | ||||
| Movie | ||||
| Reference |
|---|
|
Tomaru, Y. & Kimura, K.
2020
Novel protocol for estimating viruses specifically infecting the marine planktonic diatoms.
Diversity-Basel,
12,
225 (article ID).
Keywords: marine diatom; Chaetoceros tenuissimus; Chaetoceros setoensis; host-virus specificity; RdRp; ssRNA virus; ssDNA virus; viral genome Strain(s): 3712, 3714, 3715 DOI: 10.3390/d12060225 Hamamoto, Y. & Honda, D. 2019 Nutritional intake of Aplanochytrium (Labyrinthulea, Stramenopiles) from living diatoms revealed by culture experiments suggesting the new prey–predator interactions in the grazing food web of the marine ecosystem. PLoS One, 14, e0208941 (article ID). Strain(s): 324, 3712 PubMed: 30625142 DOI: 10.1371/journal.pone.0208941 Tomaru, Y., Toyoda, K., Suzuki, H., Nagumo, T., Kimura, K., Takao, Y. 2013 New single-stranded DNA virus with a unique genomic structure that infects marine diatom Chaetoceros setoensis. Sci Rep, 3, 3337 (article ID). Strain(s): 3710, 3711, 3712, 3713 PubMed: 24275766 DOI: 10.1038/srep03337 |
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