| Strain number | NIES-3708 | |||
|---|---|---|---|---|
| Phylum | Cyanophyta | |||
| Class | Cyanophyceae | |||
| Scientific name | Geminocystis sp. | |||
| Synonym | ||||
| Former name | ||||
| Common name | Blue-green alga ; Cyanobacteria | |||
| Locality (Date of collection) | Mimomi Hongo Park, Narashino, Chiba, Japan (2013-11-01) | |||
| Latitude / Longitude | 35.684195 / 140.064770 | |||
| Habitat (Isolation source) | Freshwater (Lake water) | |||
| History | < Hirose, Yuu < Katayama, Mitsunori | |||
| Isolator (Date of isolation) | Katayama, Mitsunori (2013-11-01) | |||
| Identified by | Hirose, Yuu | |||
| State of strain | Cryopreservation; Unialgal; Clonal; Axenic[2018 Mar] | |||
|
Culture condition (Preculture condition) |
Medium:
BG-11
Temperature: 20 C Light intensity: 6-10 µmol photons/m2/sec, L/D cycle: 10L:14D Duration: 2 M |
|||
| Gene information | Whole-genome ( AP014815 ) | |||
| Cell size (min - max) | ||||
| Organization | ||||
| Characteristics | Phototaxis ; chromatic adaptation ; Genome decoded strain (Hirose et al. 2015a) | |||
| Other strain no. | Other strain no. : CIT003 | |||
| Remarks | Cryopreserved; Axenic | |||
| Movie | ||||
| Reference |
|---|
|
Asukabe, H., Akahori, S., Ueno, E., Nakayama, T., Yamashita, R., Arii, S., Harada, K., Imanishi, S. Y.
2020
Cyanobacterial classification with the toxicity using MALDI Biotyper.
J. Am. Soc. Mass Spectrom.,
31,
1572-1578.
Keywords: cyanobacteria; MALDI Biotyper; microcystins; profiling Strain(s): 27, 39, 42, 73, 81, 87, 89, 100, 101, 102, 103, 104, 105, 107, 111, 112, 207, 208, 230, 266, 298, 416, 433, 478, 510, 512, 515, 592, 593, 604, 611, 808, 809, 835, 843, 846, 847, 905, 928, 931, 932, 945, 981, 989, 1025, 1043, 1058, 1061, 1064, 1068, 1069, 1071, 1076, 1085, 1099, 1101, 1105, 1113, 1115, 1126, 1133, 1134, 1135, 1144, 1157, 1215, 1642, 1643, 1652, 1668, 1672, 1673, 1677, 1678, 1698, 2087, 2131, 2412, 2665, 3708, 3733, 3734, 3736, 3755, 3756, 3757 PubMed: 32501712 DOI: 10.1021/jasms.0c00148 Ohbayashi, R., Hirooka, S., Onuma, R., Kanesaki, Y., Hirose, Y., Kobayashi, Y., Fujiwara, T., Furusawa, C., Miyagishima, S. 2020 Evolutionary changes in DnaA-dependent chromosomal replication in cyanobacteria. Front. Microbiol., 11, 786 (article ID). Keywords: CDS skew; chromosome replication; cyanobacteria; DnaA, GC skew; polyploidy Strain(s): 3708 PubMed: 32411117 DOI: 10.3389/fmicb.2020.00786 Hirose, Y., Misawa, N., Yonekawa, C., Nagao, N., Watanabe, M., Ikeuchi, M., Eki, T. 2017 Characterization of the genuine type 2 chromatic acclimation in the two Geminocystis cyanobacteria. DNA Res., 24, 387-396. Keywords: Cyanobacteria; chromatic acclimation; phycobilisome; cyanobacteriochrome Strain(s): 3708, 3709 PubMed: 28338901 DOI: 10.1093/dnares/dsx011 Hirose, Y., Katayama, M., Ohtsubo, Y., Misawa, N., Iioka, E., Suda, W., Oshima, K., Hanaoka, M., Tanaka, K., Eki, T., Ikeuchi, M., Kikuchi, Y., Ishida, M., Hattori, M. 2015a Complete genome sequence of cyanobacterium Geminocystis sp. strain NIES-3708, which performs type II complementary chromatic acclimation. GenomeA, 3, e00357-15 (article ID). Strain(s): 3708 PubMed: 25953174 DOI: 10.1128/genomeA.00357-15 |
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