| Strain number | NIES-3700 | |||
|---|---|---|---|---|
| Phylum | Heterokontophyta | |||
| Class | Bolidophyceae | |||
| Scientific name | Triparma verrucosa B.C.Booth | |||
| Synonym | ||||
| Former name | ||||
| Common name | ||||
| Locality (Date of collection) | Pacific Ocean (Oyashio region) (Depth -50m) Japan (2009-07-13) | |||
| Latitude / Longitude | 42.30 / 145.00 | |||
| Habitat (Isolation source) | Marine (Seawater) | |||
| History | < Ichinomiya, Mutsuo | |||
| Isolator (Date of isolation) | Ichinomiya, Mutsuo (2009-07-23) | |||
| Identified by | Ichinomiya, Mutsuo | |||
| State of strain | Subculture; Unialgal; Non-clonal; Axenic[2021 Jun] | |||
|
Culture condition (Preculture condition) |
Medium:
ESM
;
MNK
Temperature: 5 C Light intensity: 8 µmol photons/m2/sec, L/D cycle: 10L:14D Duration: 1 M |
|||
| Gene information | Whole-genome ( BRXX00000000 ) , 18S rRNA ( KR998403 ) , ITS-1-5.8S-ITS2 ( KR998388 ) , rbcL ( KR998423 ) , nadH1 ( KR998407 ) | |||
| Cell size (min - max) | ||||
| Organization | ||||
| Characteristics | Genome decoded strain (Ban et al. 2023) ; Siliceous, Non-flagellated stage[2018 May] | |||
| Other strain no. | Other strain no. : TVOY-0907 | |||
| Remarks | Axenic; Fragile species to transportation stresses; Read and agree "How to order 4.1" | |||
| Movie | ||||
| Reference |
|---|
|
Ban, H., Sato, S., Yoshikawa, S., Yamada, K., Nakamura, Y., Ichinomiya, M., Sato, N., Blanc-Mathieu, R., Endo, H., Kuwata, A., Ogata, H.
2023
Genome analysis of Parmales, the sister group of diatoms, reveals the evolutionary specialization of diatoms from phago-mixotrophs to photoautotrophs.
Commun. Biol.,
6,
697 (article ID).
Strain(s): 2565, 3699, 3700, 3701 PubMed: 37420035 DOI: 10.1038/s42003-023-05002-x Kuwata, A., Yamada, K., Ichinomiya, M., Yoshikawa, S., Tragin, M., Vaulot, D., Lopes dos Santos, A. 2018 Bolidophyceae, a sister picoplanktonic group of diatoms – a review. Front. Mar. Sci., 5, 370 (article ID). Keywords: bolidophyceae; parmales; diatoms; genetic diversity; mitosis; geographical distribution; seasonal dynamics and silicification Strain(s): 2565, 2682, 3369, 3370, 3371, 3699, 3700, 3701 DOI: 10.3389/fmars.2018.00370 Ichinomiya, M., Lopes dos Santos, A., Gourvil, P., Yoshikawa, S., Kamiya, M., Ohki, K., Audic, S., De Vargas, C., Noël, M. H., Vaulot, D., Kuwata, A. 2016 Diversity and oceanic distribution of the Parmales (Bolidophyceae), a picoplanktonic group closely related to diatoms. ISME J., 10, 2419-2434. Strain(s): 2565, 2682, 3369, 3370, 3371, 3699, 3700, 3701 PubMed: 27003244 DOI: 10.1038/ismej.2016.38 |
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