Strain number | NIES-3669 | |||
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Phylum | Chlorophyta | |||
Class | Chloropicophyceae | |||
Scientific name | Chloroparvula pacifica Lopes dos Santos, Noël & Eikrem | |||
Synonym | ||||
Former name | ||||
Common name | ||||
Locality (Date of collection) | Pacific Ocean (Oyashio region) Japan (2012-10-03) | |||
Latitude / Longitude | 42.1634 / 145.0674 | |||
Habitat (Isolation source) | Marine (Seawater) | |||
History | < Noël, Mary-Hélène | |||
Isolator (Date of isolation) | Noël, Mary-Hélène (2013-02-08) | |||
Identified by | Identified by DNA analysis at NIES | |||
State of strain | Subculture; Unialgal; Clonal; Non-axenic | |||
Culture condition (Preculture condition) |
Medium:
ESM
Temperature: 20 C Light intensity: 22-24 µmol photons/m2/sec, L/D cycle: 10L:14D Duration: 25 D |
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Gene information | Mitochondrial DNA ( MK086011 ) , Plastid DNA ( MK085995 ) , 16S rRNA ( KU843560 ) , 18S rRNA ( KU843574 ) , ITS1-5.8S-ITS2-28S ( MF077486 ) | |||
Cell size (min - max) | ||||
Organization | Unicellular | |||
Characteristics | Genome decoded strain (Turmel et al. 2019) ; Authentic strain (Lopes dos Santos et al. 2017) ; Clade VIIB1 | |||
Other strain no. |
Other collection strain no. : RCC4656
Other strain no. : MH 509 |
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Remarks | ||||
Movie |
Reference |
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Turmel, M., Lopes Dos Santos, A., Otis, C., Sergerie, R., Lemieux, C.
2019
Tracing the evolution of the plastome and mitogenome in the Chloropicophyceae uncovered convergent tRNA gene losses and a variant plastid genetic code.
Genome Biol. Evol.,
11,
1275–1292.
Keywords: prasinophyte green algae; Picocystis salinarum; chloroplast genome; mitochondrial genome; phylogenomic analyses; AUA codon reassignment Strain(s): 2755, 2758, 3669, 3835, 3849 PubMed: 30937436 DOI: 10.1093/gbe/evz074 Lopes dos Santos, A., Pollina, T., Gourvil, P., Corre, E., Marie, D., Garrido, J. L., Rodríguez, F., Noël, M.-H., Vaulot, D., Eikrem, W. 2017 Chloropicophyceae, a new class of picophytoplanktonic prasinophytes. Sci Rep, 7, 14019 (article ID). Strain(s): 2755, 2756, 2758, 3667, 3668, 3669, 3670, 3671, 3835, 3849 PubMed: 10.3775/jie.96.352 DOI: 10.1038/s41598-017-12412-5 Lopes dos Santos, A., Gourvil, P., Tragin, M., Noël, M.-H., Decelle, J., Romac, S., Vaulot, D. 2016 Diversity and oceanic distribution of prasinophytes clade VII, the dominant group of green algae in oceanic waters. ISME J., 11, 512-528. Strain(s): 2755, 2756, 2758, 3668, 3669, 3670, 3671, 3835, 3849 PubMed: 27779617 DOI: 10.1038/ismej.2016.120 |
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