| Strain number | NIES-3576 | |||
|---|---|---|---|---|
| Phylum | Heterokontophyta | |||
| Class | Bacillariophyceae | |||
| Scientific name | Nitzschia sp. | |||
| Synonym | ||||
| Former name | ||||
| Common name | Pennate diatom | |||
| Locality (Date of collection) | Miyara River, Ishigaki, Okinawa, Japan (2012-03-06) | |||
| Latitude / Longitude | ||||
| Habitat (Isolation source) | Brackish water (Plant (Mangrove)) | |||
| History | < Nakayama, Takeshi < Kamikawa, Ryoma < Taira, Misaka | |||
| Isolator (Date of isolation) | Taira, Misaka (2012-03-**) | |||
| Identified by | Mayama, Shigeki | |||
| State of strain | Cryopreservation; Unialgal; Clonal; Axenic | |||
|
Culture condition (Preculture condition) |
Medium:
ESM + CB-V
Temperature: 20 C Light intensity: 0 µmol photons/m2/sec, Duration: 21 D |
|||
| Gene information | Mitochondrial DNA ( AP018509 ) , Plastid DNA ( AP018508 ) , 16S rRNA ( AB899716 ) , 28S rRNA ( AB899702 ) | |||
| Cell size (min - max) | - 20 μm | |||
| Organization | Unicellular | |||
| Characteristics | Heterotrophic ; Benthic ; Nonphotosynthetic plastids ; Genome decoded strain (Kamikawa et al. 2018) | |||
| Other strain no. | Other strain no. : A4 | |||
| Remarks | Cryopreserved; Axenic; Nonphotosynthetic plastids | |||
| Movie | ||||
| Reference |
|---|
|
Kamikawa, R., Azuma, T., Ishii, K-I., Matsuno, Y., Miyashita, H.
2018
Diversity of organellar genomes in non-photosynthetic diatoms.
Protist,
169,
351-361.
Keywords: ATP synthase complex; mitochondria; Nitzschia; plastids; vitamin B1 Strain(s): 2729, 3576, 3581 PubMed: 29803116 DOI: 10.1016/j.protis.2018.04.009 Kamikawa, R., Yubuki, N., Yoshida, M., Taira, M., Nakamura, N., Ishida, K-I., Leander, B. S., Miyashita, H., Hashimoto, T., Mayama, S., Inagaki, Y. 2015 Multiple losses of photosynthesis in Nitzschia (Bacillariophyceae). Phycol. Res., 63, 19-28. Keywords: apochlorotic diatoms; genetic diversity; large subunit rRNA; molecular phylogenetic analysis; nonphotosynthetic plastids; plastid 16S rRNA Strain(s): 3576, 3577, 3578, 3579, 3580, 3581 DOI: 10.1111/pre.12072 |
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