Strain number | NIES-3576 | |||
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Phylum | Heterokontophyta | |||
Class | Bacillariophyceae | |||
Scientific name | Nitzschia sp. | |||
Synonym | ||||
Former name | ||||
Common name | Pennate diatom | |||
Locality (Date of collection) | Miyara River, Ishigaki, Okinawa, Japan (2012-03-06) | |||
Latitude / Longitude | ||||
Habitat (Isolation source) | Brackish water (Plant (Mangrove)) | |||
History | < Nakayama, Takeshi < Kamikawa, Ryoma < Taira, Misaka | |||
Isolator (Date of isolation) | Taira, Misaka (2012-03-**) | |||
Identified by | Mayama, Shigeki | |||
State of strain | Cryopreservation; Unialgal; Clonal; Axenic | |||
Culture condition (Preculture condition) |
Medium:
ESM + CB-V
Temperature: 20 C Light intensity: 0 µmol photons/m2/sec, Duration: 21 D |
|||
Gene information | Mitochondrial DNA ( AP018509 ) , Plastid DNA ( AP018508 ) , 16S rRNA ( AB899716 ) , 28S rRNA ( AB899702 ) | |||
Cell size (min - max) | - 20 μm | |||
Organization | Unicellular | |||
Characteristics | Heterotrophic ; Benthic ; Nonphotosynthetic plastids ; Genome decoded strain (Kamikawa et al. 2018) | |||
Other strain no. | Other strain no. : A4 | |||
Remarks | Cryopreserved; Axenic; Nonphotosynthetic plastids | |||
Movie |
Reference |
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Kamikawa, R., Azuma, T., Ishii, K-I., Matsuno, Y., Miyashita, H.
2018
Diversity of organellar genomes in non-photosynthetic diatoms.
Protist,
169,
351-361.
Keywords: ATP synthase complex; mitochondria; Nitzschia; plastids; vitamin B1 Strain(s): 2729, 3576, 3581 PubMed: 29803116 DOI: 10.1016/j.protis.2018.04.009 Kamikawa, R., Yubuki, N., Yoshida, M., Taira, M., Nakamura, N., Ishida, K-I., Leander, B. S., Miyashita, H., Hashimoto, T., Mayama, S., Inagaki, Y. 2015 Multiple losses of photosynthesis in Nitzschia (Bacillariophyceae). Phycol. Res., 63, 19-28. Keywords: apochlorotic diatoms; genetic diversity; large subunit rRNA; molecular phylogenetic analysis; nonphotosynthetic plastids; plastid 16S rRNA Strain(s): 3576, 3577, 3578, 3579, 3580, 3581 DOI: 10.1111/pre.12072 |
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