Strain number NIES-2758  
Phylum Chlorophyta  
Class Chloropicophyceae  
Scientific name Chloroparvula japonica Lopes dos Santos, Noël & Eikrem  
Synonym  
Former name  
Common name  
Locality (Date of collection) North West Pacific Ocean Japan (2010-08-27)  
Latitude / Longitude 33.3 / 138.0 
Habitat (Isolation source) Marine (Seawater)  
History < Kawachi, Masanobu < Noël, Mary-Hélène  
Isolator (Date of isolation) Noël, Mary-Hélène (2009-09-**)  
Identified by Kawachi, Masanobu  
State of strain Subculture; Unialgal; Clonal; Non-axenic  
Culture condition
(Preculture condition)
Medium:  MNKESM  
Temperature:  20 C
Light intensity:  7-9 µmol photons/m2/sec, L/D cycle:  10L:14D
Duration:  2 M  
Gene information Mitochondrial DNA ( MK086007 ) , Plastid DNA ( MK085993 ) , 16S rRNA ( LN735350 ) , 18S rRNA ( KF422628 ) , ITS1-5.8S-ITS2-28S ( MF077482 )  
Cell size (min - max) - 2 μm  
Organization  
Characteristics Genome decoded strain (Turmel et al. 2019) ; Authentic strain (Lopes dos Santos et al. 2017) ; Clade VIIB2  
Other strain no. Other collection strain no. : RCC 2339; CCMP 3360
Other strain no. : MH 340  
Remarks  
Movie  
Reference
Turmel, M., Lopes Dos Santos, A., Otis, C., Sergerie, R., Lemieux, C. 2019 Tracing the evolution of the plastome and mitogenome in the Chloropicophyceae uncovered convergent tRNA gene losses and a variant plastid genetic code. Genome Biol. Evol., 11, 1275–1292.
Keywords: prasinophyte green algae; Picocystis salinarum; chloroplast genome; mitochondrial genome; phylogenomic analyses; AUA codon reassignment
Strain(s): 27552758366938353849 
PubMed: 30937436
DOI: 10.1093/gbe/evz074

Lopes dos Santos, A., Pollina, T., Gourvil, P., Corre, E., Marie, D., Garrido, J. L., Rodríguez, F., Noël, M.-H., Vaulot, D., Eikrem, W. 2017 Chloropicophyceae, a new class of picophytoplanktonic prasinophytes. Sci Rep, 7, 14019 (article ID).
Strain(s): 2755275627583667366836693670367138353849 
PubMed: 10.3775/jie.96.352
DOI: 10.1038/s41598-017-12412-5

Lopes dos Santos, A., Gourvil, P., Tragin, M., Noël, M.-H., Decelle, J., Romac, S., Vaulot, D. 2016 Diversity and oceanic distribution of prasinophytes clade VII, the dominant group of green algae in oceanic waters. ISME J., 11, 512-528.
Strain(s): 275527562758366836693670367138353849 
PubMed: 27779617
DOI: 10.1038/ismej.2016.120

del Campo, J., Sieracki, M.E., Molestina, R., Keeling, P., Massana, R., Ruiz-Trillo, I. 2014 The others: our biased perspective of eukaryotic genomes. Trends Ecol. Evol., 29, 252-259.
Strain(s): 1000258225842587259026702673269126932694269526962697269927002707275127532755275627582761336933703371 
PubMed: 24726347
DOI: 10.1016/j.tree.2014.03.006

Unauthorized copying and replication of text, images, and tables in our homepage, are prohibited.

page-top