| Strain number | NIES-2672 | |||
|---|---|---|---|---|
| Phylum | Chlorophyta | |||
| Class | Mamiellophyceae | |||
| Scientific name | Micromonas commoda Baren, Bachy & Worden | |||
| Synonym | ||||
| Former name | Formerly identified as Micromonas pusilla, named based on Baren et al. 2016[2018 Jul] | |||
| Common name | ||||
| Locality (Date of collection) | Equatorial Pacific Ocean, France (1998-02-10) | |||
| Latitude / Longitude | / 166.33 | |||
| Habitat (Isolation source) | Marine (Seawater) | |||
| History | < RCC (2010); | |||
| Isolator (Date of isolation) | Boulben, S. (1998-02-10) | |||
| Identified by | Guillou, L. | |||
| State of strain | Cryopreservation; Unialgal; Clonal; Non-axenic | |||
|
Culture condition (Preculture condition) |
Medium:
ESM
Temperature: 20 C Light intensity: 37 µmol photons/m2/sec, L/D cycle: 10L:14D Duration: 1 M |
|||
| Gene information | Whole-genome ( PRJNA39769 ) | |||
| Cell size (min - max) | - 2 μm | |||
| Organization | Unicellular; Flagellate | |||
| Characteristics | Planktonic | |||
| Other strain no. |
Other collection strain no. : RCC299
Other strain no. : NOUM17 |
|||
| Remarks | Cryopreserved | |||
| Movie | ||||
| Reference |
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Yamagishi, T., Ota, S., Yamaguchi, H., Koshikawa, H., Tatarazako, N., Yamamoto, H., Kawachi, M.
2019
Ecotoxicological bioassay using marine algae for deep-sea mining.
In Environmental Issues of Deep-Sea Mining: Impacts, Consequences and Policy Perspectives, Ed. by Sharma, R., Springer, Cham,
pp. 255-271.
Strain(s): 323, 613, 969, 971, 981, 1000, 1001, 1310, 1411, 2304, 2587, 2590, 2670, 2672 DOI: 10.1007/978-3-030-12696-4_10 Marie, D., Le Gall, F., Edern, R., Gourvil, P., Vaulot, D. 2017 Improvement of phytoplankton culture isolation using single cell sorting by flow cytometry. J. Phycol., 53, 271-282. Keywords: antibiotics; BSA; flow cytometry; microalgal; cultures; nanoeukaryotes; phytoplankton; picoeukaryotes;; single cell sorting Strain(s): 2672 PubMed: 27878810 DOI: 10.1111/jpy.12495 McDonald, S. M., Plant, J. N. Worden, A. Z. 2010 The mixed lineage nature of nitrogen transport and assimilation in marine eukaryotic phytoplankton: a case study of Micromonas. Mol. Biol. Evol., 27, 2268-2283. Keywords: nitrogen; Micromonas; Ostreococcus; green algae; green lineage; quantitative PCR; genomics; phylogeny Strain(s): 2672 PubMed: 20457585 DOI: 10.1093/molbev/msq113 Worden, A. Z., Allen, A. E. 2010 The voyage of the microbial eukaryote. Curr. Opin. Microbiol., 13, 652-660. Strain(s): 2672 PubMed: 20832353 DOI: 10.1016/j.mib.2010.08.001 Worden, A. Z. et al. 2009 Green evolution and dynamic adaptations revealed by genomes of the Marine Picoeukaryotes Micromonas. Science, 324, 268-272. Strain(s): 2672 PubMed: 19359590 DOI: 10.1126/science.1167222 Fuller, N. J., Campbell, C., Allen, D. J., Pitt, F. D., Le Gall, F., Vaulot, D., Scanlan, D. J. 2006 Analysis of photosynthetic picoeukaryote diversity at open ocean sites in the Arabian Sea using a PCR biased towards marine algal plastids. Aquat. Microb. Ecol., 43, 79-93. Keywords: Photosynthetic picoeukaryotes; Plastid 16S rRNA; Arabian Sea; PCR Strain(s): 2586, 2588, 2589, 2672, 2673, 2687, 2690, 2693 DOI: 10.3354/ame043079 |
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