| Strain number | NIES-2285 | |||
|---|---|---|---|---|
| Phylum | Streptophyta | |||
| Class | Charophyceae | |||
| Scientific name | Klebsormidium nitens (Kützing) Lokhorst | |||
| Synonym | Ulothrix nitens Kützing; Hormidium nitens (Kützing) Rabenhorst 1863; Chlorhormidium flaccidum var. nitens (Kützing) Farooqui 1969; Chlorhormidium nitens (Meneghini) Komaromy 1976 | |||
| Former name | Formerly identified as Klebsormidium flaccidum (Kützing) Silva, Mattox & Blackwell[2016 Jun]; Hormidium barlowi | |||
| Common name | ||||
| Locality (Date of collection) | Barlow, Madison Wisconsin USA | |||
| Latitude / Longitude | 43.073308 / | |||
| Habitat (Isolation source) | Freshwater | |||
| History | < IAM (2007) < BIU (UTEX; 1965); | |||
| Isolator (Date of isolation) | Pringsheim, E. G. | |||
| Identified by | Handa, Shinji (Reidentify) | |||
| State of strain | Subculture; Unialgal; Clonal; Axenic[2018 Jan] | |||
|
Culture condition (Preculture condition) |
Medium:
C (agar)
Temperature: 20 C Light intensity: 5-9 µmol photons/m2/sec, L/D cycle: 10L:14D Duration: 6 M |
|||
| Gene information | Whole-genome ( BANV00000000 ) , Mitochondria DNA ( DF238763 ) , Plastid DNA ( DF238762 ) | |||
| Cell size (min - max) | 5 - 10 μm | |||
| Organization | ||||
| Characteristics | Genome decoded strain (Hori et al. 2014) | |||
| Other strain no. |
Other collection strain no. : IAM C-117; UTEX 321; SAG 335-1a; CCAP 335/1a
|
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| Remarks | Axenic | |||
| Movie | ||||
| Reference |
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Yokono, M., Takabayashi, A., Kishimoto, J., Fujita, T., Iwai, M., Murakami, A., Akimoto, S., Tanaka, A.
2019
The PSI-PSII megacomplex in green plants.
Plant Cell Physiol.,
60,
1098–1108.
Strain(s): 144, 296, 303, 2285, 2541 PubMed: 30753722 DOI: 10.1093/pcp/pcz026 de Mendoza, A., Bonnet, A., Vargas-Landin, D. B., Ji, N., Li, H., Yang, F., Li, L., Hori, K., Pflueger, J., Buckberry, S., Ohta, H., Rosic, N., Lesage, P., Lin, S., Lister, R. 2018 Recurrent acquisition of cytosine methyltransferases into eukaryotic retrotransposons. Nat. Commun., 9, 1341 (article ID). Keywords: DNA methylation; Epigenomics; Molecular evolution; Transposition Strain(s): 2285 PubMed: 29632298 DOI: 10.1038/s41467-018-03724-9 Ohtaka,K., Hori, K., Kanno, Y., Seo, M., Ohta, H. 2017 Primitive Auxin Response without TIR1 and Aux/IAA in the Charophyte Alga Klebsormidium nitens. Plant Physiol., 174, 1621-1632. Strain(s): 2285 PubMed: 28533212 DOI: 10.1104/pp.17.00274 Kobayashi, Y., Takusagawa, M., Harada, N., Fukao, Y., Yamaoka, S., Kohchi, T., Hori, K., Ohta, H., Shikanai, T., Nishimura, Y. 2016 Eukaryotic components remodeled chloroplast nucleoid organization during the green plant evolution. Genome Biol. Evol., 8, 1-16. Keywords: chloroplast; nucleoid; evolution; endosymbiosis Strain(s): 2285 PubMed: 26608058 DOI: 10.1093/gbe/evv233 Koeduka, T., Ishizaki, K., Mwenda, C. M., Hori, K., Sasaki-Sekimoto, Y., Ohta, H., Kohchi, T., Matsui, K. 2015 Biochemical characterization of allene oxide synthases from the liverwort Marchantia polymorpha and green microalgae Klebsormidium flaccidum provides insight into the evolutionary divergence of the plant CYP74 family. Planta, 242, 1175-1186. Keywords: Allene oxide synthase; Plant evolution; CYP74; Hydroperoxide lyase; C8 volatiles Strain(s): 2285 PubMed: 26105654 DOI: 10.1007/s00425-015-2355-8 Hori, K. Maruyama, F., Fujisawa, T., Togashi, T., Yamamoto, N., Seo, M., Sato, S., Yamada, T., Mori, H., Tajima, N., Moriyama, T., Ikeuchi, M., Watanabe, M., Wada, H., Kobayashi, K., Saito, M., Masuda, T., Sasaki-Sekimoto, Y., Mashiguchi, K., Awai, K., Shimojima, M., Masuda, S., Iwai, M., Nobusawa, T., Narise, T., Kondo, S., Saito, H., Sato, R., Murakawa, M., Ihara, Y., Oshima-Yamada, Y., Ohtaka, K., Satoh, M., Sonobe, K., Ishii, M., Ohtani, R., Kanamori-Sato, M., Honoki, R., Miyazaki, D., Mochizuki, H., Umetsu, J., Higashi, K., Shibata, D., Kamiya, Y., Sato, N., Nakamura, Y., Tabata, S., Ida, S., Kurokawa, K., Ohta, H. 2014 Klebsormidium flaccidum genome reveals primary factors for plant terrestrial adaptation. Nat. Commun., 5, 3978 (article ID). Strain(s): 2285 PubMed: 24865297 DOI: 10.1038/ncomms4978 Fawley, M. W. 1991 Disjunct distribution of the xanthophyll loroxanthin in the green algae (Chlorophyta). J. Phycol., 27, 544-548. Keywords: carotenoids; Chlorophyta; high-performance liquid chromatography; loroxanthin; xanthophylls Strain(s): 2285 DOI: 10.1111/j.0022-3646.1991.00544.x |
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