Strain Data

Strain number		NIES-2138
Phylum		Rhodophyta
Class		Porphyridiophyceae
Scientific name		Porphyridium purpureum (Bory) Drew & Ross
Synonym		Phytoconis purpurea Bory; Merrettia purpurea (Bory) Trevisan 1848
Former name
Common name		Red alga
Locality (Date of collection)		Takesako Hot Spring Kagoshima, Kagoshima, Japan
Latitude / Longitude
Habitat (Isolation source)		Hot spring
History		< IAM (2007) < Fujita, Yoshihiko; Nozawa, Koji
Isolator (Date of isolation)		Nozawa, Koji (1958--)
Identified by		Nozawa, Koji
State of strain		Cryopreservation; Unialgal; Clonal; Non-axenic
Culture condition (Preculture condition)		Medium: ESM Temperature: 20 C Light intensity: 13-18 µmol photons/m²/sec, L/D cycle: 10L:14D Duration: 3 M
Gene information
Cell size (min - max)
Organization		Unicellular
Characteristics		Color: reddish ; Floridean starch (Shimonaga et al. 2007)
Other strain no.		Other collection strain no. : IAM R-1
Remarks		Cryopreserved
Movie

Reference
Shimakawa, G., Murakami, A., Niwa, K., Matsuda, Y., Wada, A., Miyake, C. 2019 Comparative analysis of strategies to prepare electron sinks in aquatic photoautotrophs. Photosynth. Res., 139, 401–411. Keywords: Reactive oxygen species; P700 oxidation; Photosystem I; Seaweeds Strain(s): 705, 1959, 2138, 2145, 2147 PubMed: 29845382 DOI: 10.1007/s11120-018-0522-z Hamana, K., Kobayashi, M., Furuchi, T., Hayashi, H., Niitsu, M. 2018 Polyamine distribution profiles in unicellular and multicellular red algae (phylum Rhodophyta) —Detection of 1,6-diaminohexane, aminobutylcadaverine, canavalmine and aminopropylcanavalmine.— Microb. Resour. Syst., 34, 83-91. Keywords: aminobutylcadaverine; aminopropylcanavalmine; canavalmine; diaminohexane; polyamine; red algae; Rhodophyta Strain(s): 551, 1032, 1572, 1957, 2138, 2140, 2636, 2662, 2742 Takaichi, S., Yokoyama, A., Mochimaru, M., Uchida, H., Murakami, A. 2016 Carotenogenesis diversification in phylogenetic lineages of Rhodophyta. J. Phycol., 52, 329-338. Keywords: alloxanthin; antheraxanthin; carotenogenesis; carotenoid; Cryptophyta; Glaucophyta; lutein; red algae; Rhodophyta; Zeaxanthin Strain(s): 697, 700, 705, 1332, 2137, 2138 PubMed: 27273528 DOI: 10.1111/jpy.12411 Yokono, M., Murakami, A., Akimoto, S. 2011 Excitation energy transfer between photosystem II and photosystem I in red algae: larger amounts of phycobilisome enhance spillover. Biochim. Biophys. Acta-Bioenerg., 1807, 847-853. Keywords: spillover; red algae; delayed fluorescence; phycobilisome; red chlorophyll Strain(s): 2138 PubMed: 21496452 DOI: 10.1016/j.bbabio.2011.03.014 Shimonaga, T., Konishi, M., Oyama, Y., Fujiwara, S., Satoh, A., Fujita, N., Colleoni, C., Buléon, A., Putaux, J.-L., Ball, S. G., Yokoyma, A., Hara, Y., Nakamura, Y., Tsuzuki, M. 2008 Variation in Storage α-polyglucans of the Porphyridiales (Rhodophyta). Plant Cell Physiol., 49, 103-116. Keywords: Amylose; Floridean starch; Glycogen; Porphyridiales; Rhodophyta; Semi-amylopection Strain(s): 18, 144, 250, 530, 551, 2138, 2160, 2258, 2280 PubMed: 18079144 DOI: 10.1093/pcp/pcm172 Shimonaga, T., Fujiwara, S., Kaneko, M., Izumo, A., Nihei, S., Francisco, P. B., Satoh, A., Fujita, Naoko., Nakamura, Y., Tsuzuki, M. 2007 Variation in Storage α-polyglucans of red algae: amylose and semi-amylopectin types in Porphyridium and goycogen type in Cyanidium. Mar. Biotechnol., 9, 192-202. Keywords: Amylose; glycogen; granule-bound starch synthase; red algae; semi-amylopection Strain(s): 551, 2138 PubMed: 17160635 DOI: 10.1007/s10126-006-6104-7 Lee, T.-Y., Gotoh, N., Niki, E., Yokoyama, K., Tsuzuki, M., Takeuchi, T., Karube, I. 1995 Chemilluminescence detection of red tide phytoplankton Chattonella marina. Anal. Chem., 67, 225-228. Strain(s): 2138 Kashino, Y., Enami, I., Satoh, K., Katoh, S. 1990 Immunological cross-reactivity among corresponding proteins of photosystems I and II from widely divergent photosynthetic organisms. Plant Cell Physiol., 31, 479-488. Keywords: antiserum; cross-reactivity; immunoblotting; photosystem; protein Strain(s): 2093, 2138, 2235 DOI: 10.1093/oxfordjournals.pcp.a077935 Tsuzuki, M., Ohnuma, E., Sato, N., Takaku, T., Kawaguchi, A. 1990 Effects of CO₂ concentration during growth on fatty acid composition in microalgae. Plant Physiol., 93, 851-856. Strain(s): 48, 2093, 2138, 2160, 2235 PubMed: 1666759 DOI: 10.1104/pp.93.3.851 Shimogawara, K. & Muto, S. 1989 Heat shock induced change in protein ubiquitination in Chlamydomonas. Plant Cell Physiol., 30, 9-16. Keywords: ATP-dependent proteolytic system; Chlamydomonas; heat shock response; protein degradation; ubiquitin Strain(s): 2138 Tsuzuki, M. & Miyachi, S. 1989 The function of carbonic anhydrase in aquatic photosynthesis. Aquatic Botany, 34, 85-104. Strain(s): 2093, 2138, 2160, 2173, 2235 DOI: 10.1016/0304-3770(89)90051-X Yagawa, Y., Muto, S., Miyachi, S. 1987 Carbonic anhydrase of a unicellular red alga Porphyridium cruentum R-1. I. Purification and properties of the enzyme. Plant Cell Physiol., 28, 1253-1262. Keywords: carbonic anhydrase; chloride ion-activation; Porphyridium cruentum Strain(s): 2138 DOI: 10.1093/oxfordjournals.pcp.a077413 Yagawa, Y., Muto, S., Miyachi, S. 1987 Carbonic anhydrase of a unicellular red alga Porphyridium cruentum R-1. II. Distribution and role in photosynthesis. Plant Cell Physiol., 28, 1509-1516. Keywords: anti-Porphyridium carbonic anhydrase antibody; carbonic anhydrase; immunogold electron microscopy; intracellular distribution; Porphyridium cruentum Strain(s): 2138 DOI: 10.1093/oxfordjournals.pcp.a077445 Aizawa, K., Nakamura, Y., Miyachi, S. 1985 Variation of phosphoenolpyruvate carboxylase activity in Dunaliella associated with changes in atmospheric CO₂ concentration. Plant Cell Physiol., 26, 1199-1203. Keywords: carbonic anhydrase; Dunaliella; phosphoenolpyruvate carboxylase; photosynthesis; Porphyridium Strain(s): 2138 DOI: 10.1093/oxfordjournals.pcp.a077016 Sakaguchi, T., Horikoshi, T., Nakajima, A. 1978 Uptake of uranium from seawater by microalgae. J. Ferm. Technol., 56, 561-565. Strain(s): 2138, 2139, 2212, 2238, 2279

Reference

Shimakawa, G., Murakami, A., Niwa, K., Matsuda, Y., Wada, A., Miyake, C. 2019 Comparative analysis of strategies to prepare electron sinks in aquatic photoautotrophs. Photosynth. Res., 139, 401–411.
Keywords: Reactive oxygen species; P700 oxidation; Photosystem I; Seaweeds
Strain(s): 705, 1959, 2138, 2145, 2147
PubMed: 29845382
DOI: 10.1007/s11120-018-0522-z

Hamana, K., Kobayashi, M., Furuchi, T., Hayashi, H., Niitsu, M. 2018 Polyamine distribution profiles in unicellular and multicellular red algae (phylum Rhodophyta) —Detection of 1,6-diaminohexane, aminobutylcadaverine, canavalmine and aminopropylcanavalmine.— Microb. Resour. Syst., 34, 83-91.
Keywords: aminobutylcadaverine; aminopropylcanavalmine; canavalmine; diaminohexane; polyamine; red algae; Rhodophyta
Strain(s): 551, 1032, 1572, 1957, 2138, 2140, 2636, 2662, 2742

Takaichi, S., Yokoyama, A., Mochimaru, M., Uchida, H., Murakami, A. 2016 Carotenogenesis diversification in phylogenetic lineages of Rhodophyta. J. Phycol., 52, 329-338.
Keywords: alloxanthin; antheraxanthin; carotenogenesis; carotenoid; Cryptophyta; Glaucophyta; lutein; red algae; Rhodophyta; Zeaxanthin
Strain(s): 697, 700, 705, 1332, 2137, 2138
PubMed: 27273528
DOI: 10.1111/jpy.12411

Yokono, M., Murakami, A., Akimoto, S. 2011 Excitation energy transfer between photosystem II and photosystem I in red algae: larger amounts of phycobilisome enhance spillover. Biochim. Biophys. Acta-Bioenerg., 1807, 847-853.
Keywords: spillover; red algae; delayed fluorescence; phycobilisome; red chlorophyll
Strain(s): 2138
PubMed: 21496452
DOI: 10.1016/j.bbabio.2011.03.014

Shimonaga, T., Konishi, M., Oyama, Y., Fujiwara, S., Satoh, A., Fujita, N., Colleoni, C., Buléon, A., Putaux, J.-L., Ball, S. G., Yokoyma, A., Hara, Y., Nakamura, Y., Tsuzuki, M. 2008 Variation in Storage α-polyglucans of the Porphyridiales (Rhodophyta). Plant Cell Physiol., 49, 103-116.
Keywords: Amylose; Floridean starch; Glycogen; Porphyridiales; Rhodophyta; Semi-amylopection
Strain(s): 18, 144, 250, 530, 551, 2138, 2160, 2258, 2280
PubMed: 18079144
DOI: 10.1093/pcp/pcm172

Shimonaga, T., Fujiwara, S., Kaneko, M., Izumo, A., Nihei, S., Francisco, P. B., Satoh, A., Fujita, Naoko., Nakamura, Y., Tsuzuki, M. 2007 Variation in Storage α-polyglucans of red algae: amylose and semi-amylopectin types in Porphyridium and goycogen type in Cyanidium. Mar. Biotechnol., 9, 192-202.
Keywords: Amylose; glycogen; granule-bound starch synthase; red algae; semi-amylopection
Strain(s): 551, 2138
PubMed: 17160635
DOI: 10.1007/s10126-006-6104-7

Lee, T.-Y., Gotoh, N., Niki, E., Yokoyama, K., Tsuzuki, M., Takeuchi, T., Karube, I. 1995 Chemilluminescence detection of red tide phytoplankton Chattonella marina. Anal. Chem., 67, 225-228.
Strain(s): 2138

Kashino, Y., Enami, I., Satoh, K., Katoh, S. 1990 Immunological cross-reactivity among corresponding proteins of photosystems I and II from widely divergent photosynthetic organisms. Plant Cell Physiol., 31, 479-488.
Keywords: antiserum; cross-reactivity; immunoblotting; photosystem; protein
Strain(s): 2093, 2138, 2235
DOI: 10.1093/oxfordjournals.pcp.a077935

Tsuzuki, M., Ohnuma, E., Sato, N., Takaku, T., Kawaguchi, A. 1990 Effects of CO₂ concentration during growth on fatty acid composition in microalgae. Plant Physiol., 93, 851-856.
Strain(s): 48, 2093, 2138, 2160, 2235
PubMed: 1666759
DOI: 10.1104/pp.93.3.851

Shimogawara, K. & Muto, S. 1989 Heat shock induced change in protein ubiquitination in Chlamydomonas. Plant Cell Physiol., 30, 9-16.
Keywords: ATP-dependent proteolytic system; Chlamydomonas; heat shock response; protein degradation; ubiquitin
Strain(s): 2138

Tsuzuki, M. & Miyachi, S. 1989 The function of carbonic anhydrase in aquatic photosynthesis. Aquatic Botany, 34, 85-104.
Strain(s): 2093, 2138, 2160, 2173, 2235
DOI: 10.1016/0304-3770(89)90051-X

Yagawa, Y., Muto, S., Miyachi, S. 1987 Carbonic anhydrase of a unicellular red alga Porphyridium cruentum R-1. I. Purification and properties of the enzyme. Plant Cell Physiol., 28, 1253-1262.
Keywords: carbonic anhydrase; chloride ion-activation; Porphyridium cruentum
Strain(s): 2138
DOI: 10.1093/oxfordjournals.pcp.a077413

Yagawa, Y., Muto, S., Miyachi, S. 1987 Carbonic anhydrase of a unicellular red alga Porphyridium cruentum R-1. II. Distribution and role in photosynthesis. Plant Cell Physiol., 28, 1509-1516.
Keywords: anti-Porphyridium carbonic anhydrase antibody; carbonic anhydrase; immunogold electron microscopy; intracellular distribution; Porphyridium cruentum
Strain(s): 2138
DOI: 10.1093/oxfordjournals.pcp.a077445

Aizawa, K., Nakamura, Y., Miyachi, S. 1985 Variation of phosphoenolpyruvate carboxylase activity in Dunaliella associated with changes in atmospheric CO₂ concentration. Plant Cell Physiol., 26, 1199-1203.
Keywords: carbonic anhydrase; Dunaliella; phosphoenolpyruvate carboxylase; photosynthesis; Porphyridium
Strain(s): 2138
DOI: 10.1093/oxfordjournals.pcp.a077016

Sakaguchi, T., Horikoshi, T., Nakajima, A. 1978 Uptake of uranium from seawater by microalgae. J. Ferm. Technol., 56, 561-565.
Strain(s): 2138, 2139, 2212, 2238, 2279

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