| Strain number | NIES-2098 | |||
|---|---|---|---|---|
| Phylum | Cyanophyta | |||
| Class | Cyanophyceae | |||
| Scientific name | Calothrix sp. | |||
| Synonym | ||||
| Former name | Calothrix elenkinii Kossinskaja | |||
| Common name | Blue-green alga ; Cyanobacteria | |||
| Locality (Date of collection) | ||||
| Latitude / Longitude | ||||
| Habitat (Isolation source) | ||||
| History | < IAM (2007) < Ishikawa, Masako | |||
| Isolator (Date of isolation) | Ishikawa, Masako | |||
| Identified by | Re-identified by DNA analysis at NIES | |||
| State of strain | Cryopreservation; Unialgal; Clonal; Axenic[2013 Feb] | |||
|
Culture condition (Preculture condition) |
Medium:
MDM (agar)
Temperature: 20 C Light intensity: 9-10 µmol photons/m2/sec, L/D cycle: 10L:14D Duration: 4 M |
|||
| Gene information | Whole-genome ( AP018172 ) , 16S rRNA ( LC215281 ) , Plasmid DNA ( AP018173 ) | |||
| Cell size (min - max) | ||||
| Organization | Filamentous | |||
| Characteristics | Nitrogen fixation (aerobic condition, Modified BG-110 medium, N-Free medium) ; Genome decoded strain | |||
| Other strain no. |
Other collection strain no. : IAM M-61
Other strain no. : Ishikawa 103X (1) W-N-F |
|||
| Remarks | Cryopreserved; Axenic | |||
| Movie | ||||
| Reference |
|---|
|
Nowruzi, B., Hutarova, L., Vešelenyiova, D., Metcalf, J. S.
2024
Characterization of Neowestiellopsis persica A1387 (Hapalosiphonaceae) based on the cpcA, psbA, rpoC1, nifH and nifD gene sequences.
BMC Ecol. Evol.,
24,
57 (article ID).
Keywords: Cyanobacteria; Phylogenetic analysis; Neowestiellopsis persica, cpcA Strain(s): 21, 22, 23, 25, 50, 73, 267, 592, 2098, 2100, 2107, 3275, 3754, 3756, 3974, 4073, 4074, 4101, 4103, 4106 PubMed: 38711016 DOI: 10.1186/s12862-024-02244-z Carrell, A. A., Lawrence, T. J., Cabugao, K. G. M., Carper, D. L., Pelletier, D. A., Lee, J. H., Jawdy, S., Grimwood, J., Schmutz, J., Hanson, P. J., Shaw, A. J., Weston, D. J. 2022 Habitat-adapted microbial communities mediate Sphagnum peatmoss resilience to warming. New Phytol., 234, 2111-2125. Keywords: climate change; heat tolerance; microbiome transfer; moss; peatland; Sphagnum; symbiosis; synthetic communities Strain(s): 25, 81, 2098, 2100, 2107 DOI: 10.1111/nph.18072 Gao, J.-J., Zhang, L.. Peng, R.-H., Wang, B., Feng, H.-J., Li, Z.-J., Yao, Q.-H. 2021 Recombinant expression of Thermosynechococcus elongatus BP-1 glutathione S-transferase in Arabidopsis thaliana: an efficient tool for phytoremediation of thiocyanate. Biotechnol. Biotechnol. Equip., 34, 494-505. Keywords: Thiocyanate; Thermosynechococcus elongatus BP-1; Arabidopsis thaliana; transgenic; enhance phytoremediation; glutathione S-transferase; degradation Strain(s): 2098, 2134, 4103 DOI: 10.1080/13102818.2020.1779127 Hirose, Y., Ohtsubo, Y., Misawa, N., Yonekawa, C., Nagao, N., Shimura, Y., Fujisawa, T., Kanesaki, Y., Katoh, H., Katayama, M., Yamaguchi, H., Yoshikawa, H., Ikeuchi, M., Eki, T., Nakamura, Y., Kawachi, M. 2021 Genome sequencing of the NIES Cyanobacteria collection with a focus on the heterocyst-forming clade. DNA Res., 28, dsab024 (article ID). Keywords: Cyanobacteria; genome; heterocyst; culture collection; taxonomy Strain(s): 19, 21, 22, 23, 25, 37, 50, 73, 267, 806, 932, 2098, 2100, 2107, 2109, 2111, 2130, 2135, 3275, 3585, 3757, 3974, 4070, 4073, 4074, 4075, 4101, 4102, 4103, 4106 PubMed: 34677568 DOI: 10.1093/dnares/dsab024 MacCready, J. S., Basalla, J. L., Vecchiarelli, A. G. 2020 Origin and evolution of carboxysome positioning systems in cyanobacteria. Mol. Biol. Evol., 37, 1434–1451. Strain(s): 21, 22, 25, 26, 30, 39, 44, 73, 87, 88, 267, 592, 806, 843, 932, 970, 2098, 2100, 2107, 2108, 2111, 2549, 3275, 3754, 3756, 3974, 4073, 4074, 4075, 4101, 4103, 4106 PubMed: 31899489 DOI: 10.1093/molbev/msz308 Hosoya, R., Hamana, K., Isobe, M., Yokota, A. 2005 Polyamine distribution profiles within Cyanobacteria. Microbiol. Cult. Coll., 21, 3-8. Keywords: cyanobacteria; homospermidine; polyamine; spermidine Strain(s): 19, 21, 22, 28, 30, 34, 37, 41, 44, 45, 50, 73, 78, 79, 80, 81, 204, 208, 510, 512, 515, 592, 593, 610, 843, 846, 847, 2093, 2096, 2098, 2100, 2102, 2107, 2108, 2118, 2119, 2123, 2124, 2125, 2126, 2128, 2129, 2131, 2132, 3259, 3275, 3276, 3277 |
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