Strain Data

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Strain number		NIES-71
Phylum		Heterokontophyta
Class		Bacillariophyceae
Scientific name		Achnanthidium minutissimum (Kützing) Czarnecki
Synonym		Achnanthes minutissima Kützing 1833; Achnanthidium lanceolatum f. minutissima (Kützing) Tömösvary 1879; Cocconeis minutissima (Kützing) Schönfeldt 1907; Microneis minutissima (Kützing) Meister 1912
Former name
Common name		Pennate diatom
Locality (Date of collection)		Kosaka River, Akita, Japan (1983-04-19)
Latitude / Longitude
Habitat (Isolation source)		Freshwater (River water)
History		< Yuri, Akira
Isolator (Date of isolation)		Yuri, Akira (1983-09-27)
Identified by		Mizuno, Makoto
State of strain		Subculture; Unialgal; Clonal; Axenic[2018 Jan]
Culture condition (Preculture condition)		Medium: CSi Temperature: 20 C Light intensity: 24-39 µmol photons/m²/sec, L/D cycle: 10L:14D Duration: 45 D
Gene information
Cell size (min - max)		8 - 12 μm
Organization		Unicellular
Characteristics		Test strain for AGP etc. (Ishihara, S. et al. 2006;（ Nagai, T., 2016)
Other strain no.		Other strain no. : A15-6
Remarks		Axenic
Movie

Reference
Ito, T., Okabe, K., Mori, M. 2018 Growth reduction of Microcystis aeruginosa by clay ball elution solution. Appl. Clay Sci., 162, 223-229. Keywords: Cyanobacterial bloom; Clay ball; Microcystis aeruginosa; Silicate; Diatom; Concrete Strain(s): 71, 1068 DOI: 10.1016/j.clay.2018.06.018 Nagai, T. 2017 Predicting herbicide mixture effects on multiple algal species using mixture toxicity models. Environ. Toxicol. Chem., 36, 2624-2630. Keywords: Pesticide; Species sensitivity distribution; Mixture toxicology; Algae; Mode of action Strain(s): 71, 487, 512, 797 PubMed: 28316094 DOI: 10.1002/etc.3800 Mitani, E., Nakayama, F., Matsuwaki, I., Ichi, I., Kawabata, A., Kawachi, M., Kato, M. 2017 Fatty acid composition profiles of 235 strains of three microalgal divisions within the NIES Microbial Culture Collection. Microb. Resour. Syst., 33, 19-29. Keywords: Cryptophyta; docosahexaenoic acid; eicosapentaenoic acid; fatty acid; Haptophyta; Heterokontophyta; microalgae Strain(s): 1, 8, 9, 14, 15, 17, 71, 115, 223, 225, 233, 234, 265, 274, 275, 276, 277, 278, 279, 280, 281, 282, 284, 293, 323, 324, 330, 333, 344, 345, 346, 347, 348, 350, 353, 372, 377, 388, 391, 395, 407, 408, 409, 413, 414, 417, 461, 462, 466, 487, 534, 548, 553, 556, 557, 558, 559, 560, 562, 587, 588, 589, 590, 603, 605, 622, 623, 695, 696, 697, 698, 699, 700, 701, 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714, 715, 716, 741, 765, 766, 767, 805, 837, 997, 1001, 1002, 1003, 1004, 1005, 1006, 1007, 1009, 1011, 1016, 1017, 1044, 1045, 1046, 1047, 1302, 1303, 1324, 1327, 1330, 1339, 1340, 1349, 1353, 1370, 1375, 1376, 1379, 1383, 1384, 1385, 1386, 1387, 1391, 1392, 1393, 1395, 1398, 1399, 1400, 1401, 1699, 1700, 1730, 1813, 1815, 1816, 1826, 1827, 1831, 1862, 1863, 1864, 1865, 1874, 1963, 1964, 1965, 1974, 1975, 1976, 2142, 2143, 2144, 2145, 2147, 2148, 2300, 2331, 2332, 2351, 2363, 2364, 2365, 2369, 2370, 2376, 2506, 2533, 2534, 2535, 2536, 2537, 2590, 2633, 2668, 2689, 2690, 2691, 2693, 2694, 2696, 2697, 2707, 2716, 2717, 2718, 2720, 2722, 2723, 2725, 2726, 2729, 2730, 2731, 2732, 2770, 2771, 2772, 2773, 2839, 2840, 2841, 2842, 2843, 2844, 2859, 2872, 2878, 2890, 2899, 3391, 3689, 3690, 3691 Nagai, T., Taya, K., Yoda, I. 2016 Comparative toxicity of 20 herbicides to 5 periphytic algae and the relationship with mode of action. Environ. Toxicol. Chem., 35, 368-375. Keywords: Attached algae; In-vivo fluorescence; Pesticides; Species sensitivity distribution Strain(s): 71, 487, 512, 797 PubMed: 26174500 DOI: 10.1002/etc.3150 Fukuda, S., Iwamoto, K., Atsumi, M., Yokoyama, A., Nakayama, T., Ishida, K-I., Inouye, I., Shiraiwa, Y. 2014 Global searches for microalgae and aquatic plants that can eliminate radioactive cesium, iodine and strontium from the radio-polluted aquatic environment: a bioremediation strategy. J. Plant Res., 127, 79-89. Keywords: Algal phytoremediation; Bioaccumulation; Radiopollution; Radionuclide elimination; Radioactive cesium; The Fukushima 1 Nuclear Power Plant accident Strain(s): 24, 36, 71, 155, 160, 203, 233, 246, 329, 333, 391, 405, 417, 440, 487, 503, 529, 531, 538, 548, 553, 587, 597, 678, 727, 805, 843, 859, 931, 995, 1003, 1012, 1015, 1017, 1031, 1044, 1045, 1259, 1326, 1331, 1377, 1382, 1388, 1411, 1435, 1439, 1440, 1441, 1442, 1458, 1728, 1826, 1831, 1833, 1840, 1846, 1862, 1865, 1956, 2131, 2144, 2146, 2147, 2150, 2175, 2176, 2185, 2268, 2325, 2341, 2352, 2377, 2412, 2437, 2854, 2855, 2856, 2858, 2859, 2860 PubMed: 24346654 DOI: 10.1007/s10265-013-0596-9 Nagai, T. 2014 河川付着藻類を用いた農薬の毒性試験マニュアル Ver. 1.0 In Research Project for Environmental Risk Assessment of Nutrients and Organochemicals, NIAES, 52 pp (in Japanese). Strain(s): 71, 487, 512, 797 Nagai, T., Taya, K., Annoh, H., Ishihara, S. 2013 Application of a fluorometric microplate algal toxicity assay for riverine periphytic algal species. Ecotox. Environ. Safe., 94, 37-44. Keywords: Attached algae; In-vivo fluorescence; Pesticides; Species sensitivity distribution Strain(s): 35, 71, 73, 414, 487, 512, 797 DOI: 10.1016/j.ecoenv.2013.04.020 Mizoguchi, T., Kimura, Y., Yoshitomi, T., Tamiaki, H. 2011 The stereochemistry of chlorophyll-c₃ from the haptophyte Emiliania huxleyi: the (13²R)-enantiomers of chlorophylls-c are exclusively selected as the photosynthetically active pigments in chromophyte algae. Biochim. Biophys. Acta-Bioenerg., 1807, 1467-1473. Keywords: chlorophyll-c; chiral HPLC; enantioimer; chromophyte algae; light-harvesting complexes Strain(s): 71, 281, 696, 837 PubMed: 21806961 DOI: 10.1016/j.bbabio.2011.07.008 Hayashi, S., Jang, J. E., Itoh, K., Suyama, K., Yamamoto, H. 2011 Construction of river model bioﬁlm for assessing pesticide effects. Arch. Environ. Contam. Toxicol., 60, 44-56. Strain(s): 71, 803 PubMed: 20422166 DOI: 10.1007/s00244-010-9531-4 Hamana, K. 2008 Cellular polyamines of phototrophs and beterotrophs belonging to the lower eukaryotic phyla Cercozoa, Euglenozoa, Heterokonta and Metamonada. J. Gen. Appl. Microbiol., 54, 135-140. Keywords: cyanobacteria; homospermidine; polyamine; spermine; thermospermine Strain(s): 9, 15, 71, 86, 118, 253, 323, 330, 333, 548, 603, 622, 1002, 1003, 1011, 1044, 1303, 1380, 1440, 1443, 1444 PubMed: 18497488 DOI: 10.2323/jgam.54.135 Ishihara, S., Horio, T., Kobara, Y., Yokoyama, A., Mayama, S. 2006 Development of a growth inhibition test method using fresh water attached diatoms. Jpn. J. Environ. Toxicol., 9, 101-113 (in Japanese with English summary). Keywords: attached diatom; growth inhibition test; herbicide; ecological risk assessment Strain(s): 71, 2717, 2718, 2719, 2720, 2721, 2722, 2724, 2725, 2726, 2727, 2728, 2729, 2730, 2731, 2732, 2733 DOI: 10.11403/jset.9.101 Ishihara, S., Horio, T., Kobara, Y., Yokoyama, A. 2006 Evaluation of herbicide effects on microalgal cells by flow cytometric analysis. J. Weed Sci. Tech., 51, 239-248 (in Japanese with English summary). Keywords: herbicide; flow cytometry; algae; morphological change; recoverability; ecological risk assessment Strain(s): 71, 230 DOI: 10.3719/weed.51.239 Nakai, S., Yamane, S., Hosomi, M. 2000 Algal growth inhibition effects of Myriophyllum spicatum-releasing four allelopathic polyphenols. J. Jpn. Soc. Wat. Environ., 23, 726-730 (in Japanese with English summary). Keywords: allelochemical; polyphenol; algae; concentration-dependent synergistic growth inhibition; autoxidation Strain(s): 35, 71, 87, 96, 512 Takamura, N., Kasai, F., Watanabe, M. M. 1989 Effects of Cu, Cd and Zn on photosynthesis of freshwater benthic algae. J. Appl. Phycol., 1, 39-52. Keywords: heavy metal; photosynthesis; algae; tolerance Strain(s): 71, 305, 329, 407, 408, 409, 410, 411, 412, 413, 414, 416, 433, 434, 454, 461, 465, 466, 467, 479, 481, 487, 503, 504, 505, 506, 507, 509, 510, 515, 529, 530, 531, 532, 536, 537, 538, 539, 540, 620, 639, 640, 641, 642, 659, 660, 661, 662 Takamura, N., Kasai, F., Watanabe, M. M. 1988 Differences in the tolerant level of benthic algae to heavy metal - The effects of Cu, Cd, and Zn on the photosynthesis. Res. Rep. Natl. Inst. Environ. Stud., No. 114, 223-232 (in Japanese with English summary). Strain(s): 71, 305, 329, 411, 412, 413, 434, 504, 531, 538, 641, 642, 662 Otsuki, A., Watanabe, M. M., Sugahara, K. 1987 Chlorophyll pigments in methanol extracts from ten axenic cultured diatoms and three green algae as determined by reverse phase HPLC with fluorometric detection. J. Phycol., 23, 406-414. Keywords: chlorophyll c complex; chlorophyll pigments; diatoms; field desorption mass spectrometry; methanol extracts; reverse phase HPLC Strain(s): 16, 56, 71, 157, 225, 534 DOI: 10.1111/j.1529-8817.1987.tb02526.x

Reference

Ito, T., Okabe, K., Mori, M. 2018 Growth reduction of Microcystis aeruginosa by clay ball elution solution. Appl. Clay Sci., 162, 223-229.
Keywords: Cyanobacterial bloom; Clay ball; Microcystis aeruginosa; Silicate; Diatom; Concrete
Strain(s): 71, 1068
DOI: 10.1016/j.clay.2018.06.018

Nagai, T. 2017 Predicting herbicide mixture effects on multiple algal species using mixture toxicity models. Environ. Toxicol. Chem., 36, 2624-2630.
Keywords: Pesticide; Species sensitivity distribution; Mixture toxicology; Algae; Mode of action
Strain(s): 71, 487, 512, 797
PubMed: 28316094
DOI: 10.1002/etc.3800

Mitani, E., Nakayama, F., Matsuwaki, I., Ichi, I., Kawabata, A., Kawachi, M., Kato, M. 2017 Fatty acid composition profiles of 235 strains of three microalgal divisions within the NIES Microbial Culture Collection. Microb. Resour. Syst., 33, 19-29.
Keywords: Cryptophyta; docosahexaenoic acid; eicosapentaenoic acid; fatty acid; Haptophyta; Heterokontophyta; microalgae
Strain(s): 1, 8, 9, 14, 15, 17, 71, 115, 223, 225, 233, 234, 265, 274, 275, 276, 277, 278, 279, 280, 281, 282, 284, 293, 323, 324, 330, 333, 344, 345, 346, 347, 348, 350, 353, 372, 377, 388, 391, 395, 407, 408, 409, 413, 414, 417, 461, 462, 466, 487, 534, 548, 553, 556, 557, 558, 559, 560, 562, 587, 588, 589, 590, 603, 605, 622, 623, 695, 696, 697, 698, 699, 700, 701, 702, 703, 704, 705, 706, 707, 708, 709, 710, 711, 712, 713, 714, 715, 716, 741, 765, 766, 767, 805, 837, 997, 1001, 1002, 1003, 1004, 1005, 1006, 1007, 1009, 1011, 1016, 1017, 1044, 1045, 1046, 1047, 1302, 1303, 1324, 1327, 1330, 1339, 1340, 1349, 1353, 1370, 1375, 1376, 1379, 1383, 1384, 1385, 1386, 1387, 1391, 1392, 1393, 1395, 1398, 1399, 1400, 1401, 1699, 1700, 1730, 1813, 1815, 1816, 1826, 1827, 1831, 1862, 1863, 1864, 1865, 1874, 1963, 1964, 1965, 1974, 1975, 1976, 2142, 2143, 2144, 2145, 2147, 2148, 2300, 2331, 2332, 2351, 2363, 2364, 2365, 2369, 2370, 2376, 2506, 2533, 2534, 2535, 2536, 2537, 2590, 2633, 2668, 2689, 2690, 2691, 2693, 2694, 2696, 2697, 2707, 2716, 2717, 2718, 2720, 2722, 2723, 2725, 2726, 2729, 2730, 2731, 2732, 2770, 2771, 2772, 2773, 2839, 2840, 2841, 2842, 2843, 2844, 2859, 2872, 2878, 2890, 2899, 3391, 3689, 3690, 3691

Nagai, T., Taya, K., Yoda, I. 2016 Comparative toxicity of 20 herbicides to 5 periphytic algae and the relationship with mode of action. Environ. Toxicol. Chem., 35, 368-375.
Keywords: Attached algae; In-vivo fluorescence; Pesticides; Species sensitivity distribution
Strain(s): 71, 487, 512, 797
PubMed: 26174500
DOI: 10.1002/etc.3150

Fukuda, S., Iwamoto, K., Atsumi, M., Yokoyama, A., Nakayama, T., Ishida, K-I., Inouye, I., Shiraiwa, Y. 2014 Global searches for microalgae and aquatic plants that can eliminate radioactive cesium, iodine and strontium from the radio-polluted aquatic environment: a bioremediation strategy. J. Plant Res., 127, 79-89.
Keywords: Algal phytoremediation; Bioaccumulation; Radiopollution; Radionuclide elimination; Radioactive cesium; The Fukushima 1 Nuclear Power Plant accident
Strain(s): 24, 36, 71, 155, 160, 203, 233, 246, 329, 333, 391, 405, 417, 440, 487, 503, 529, 531, 538, 548, 553, 587, 597, 678, 727, 805, 843, 859, 931, 995, 1003, 1012, 1015, 1017, 1031, 1044, 1045, 1259, 1326, 1331, 1377, 1382, 1388, 1411, 1435, 1439, 1440, 1441, 1442, 1458, 1728, 1826, 1831, 1833, 1840, 1846, 1862, 1865, 1956, 2131, 2144, 2146, 2147, 2150, 2175, 2176, 2185, 2268, 2325, 2341, 2352, 2377, 2412, 2437, 2854, 2855, 2856, 2858, 2859, 2860
PubMed: 24346654
DOI: 10.1007/s10265-013-0596-9

Nagai, T. 2014 河川付着藻類を用いた農薬の毒性試験マニュアル Ver. 1.0 In Research Project for Environmental Risk Assessment of Nutrients and Organochemicals, NIAES, 52 pp (in Japanese).
Strain(s): 71, 487, 512, 797

Nagai, T., Taya, K., Annoh, H., Ishihara, S. 2013 Application of a fluorometric microplate algal toxicity assay for riverine periphytic algal species. Ecotox. Environ. Safe., 94, 37-44.
Keywords: Attached algae; In-vivo fluorescence; Pesticides; Species sensitivity distribution
Strain(s): 35, 71, 73, 414, 487, 512, 797
DOI: 10.1016/j.ecoenv.2013.04.020

Mizoguchi, T., Kimura, Y., Yoshitomi, T., Tamiaki, H. 2011 The stereochemistry of chlorophyll-c₃ from the haptophyte Emiliania huxleyi: the (13²R)-enantiomers of chlorophylls-c are exclusively selected as the photosynthetically active pigments in chromophyte algae. Biochim. Biophys. Acta-Bioenerg., 1807, 1467-1473.
Keywords: chlorophyll-c; chiral HPLC; enantioimer; chromophyte algae; light-harvesting complexes
Strain(s): 71, 281, 696, 837
PubMed: 21806961
DOI: 10.1016/j.bbabio.2011.07.008

Hayashi, S., Jang, J. E., Itoh, K., Suyama, K., Yamamoto, H. 2011 Construction of river model bioﬁlm for assessing pesticide effects. Arch. Environ. Contam. Toxicol., 60, 44-56.
Strain(s): 71, 803
PubMed: 20422166
DOI: 10.1007/s00244-010-9531-4

Hamana, K. 2008 Cellular polyamines of phototrophs and beterotrophs belonging to the lower eukaryotic phyla Cercozoa, Euglenozoa, Heterokonta and Metamonada. J. Gen. Appl. Microbiol., 54, 135-140.
Keywords: cyanobacteria; homospermidine; polyamine; spermine; thermospermine
Strain(s): 9, 15, 71, 86, 118, 253, 323, 330, 333, 548, 603, 622, 1002, 1003, 1011, 1044, 1303, 1380, 1440, 1443, 1444
PubMed: 18497488
DOI: 10.2323/jgam.54.135

Ishihara, S., Horio, T., Kobara, Y., Yokoyama, A., Mayama, S. 2006 Development of a growth inhibition test method using fresh water attached diatoms. Jpn. J. Environ. Toxicol., 9, 101-113 (in Japanese with English summary).
Keywords: attached diatom; growth inhibition test; herbicide; ecological risk assessment
Strain(s): 71, 2717, 2718, 2719, 2720, 2721, 2722, 2724, 2725, 2726, 2727, 2728, 2729, 2730, 2731, 2732, 2733
DOI: 10.11403/jset.9.101

Ishihara, S., Horio, T., Kobara, Y., Yokoyama, A. 2006 Evaluation of herbicide effects on microalgal cells by flow cytometric analysis. J. Weed Sci. Tech., 51, 239-248 (in Japanese with English summary).
Keywords: herbicide; flow cytometry; algae; morphological change; recoverability; ecological risk assessment
Strain(s): 71, 230
DOI: 10.3719/weed.51.239

Nakai, S., Yamane, S., Hosomi, M. 2000 Algal growth inhibition effects of Myriophyllum spicatum-releasing four allelopathic polyphenols. J. Jpn. Soc. Wat. Environ., 23, 726-730 (in Japanese with English summary).
Keywords: allelochemical; polyphenol; algae; concentration-dependent synergistic growth inhibition; autoxidation
Strain(s): 35, 71, 87, 96, 512

Takamura, N., Kasai, F., Watanabe, M. M. 1989 Effects of Cu, Cd and Zn on photosynthesis of freshwater benthic algae. J. Appl. Phycol., 1, 39-52.
Keywords: heavy metal; photosynthesis; algae; tolerance
Strain(s): 71, 305, 329, 407, 408, 409, 410, 411, 412, 413, 414, 416, 433, 434, 454, 461, 465, 466, 467, 479, 481, 487, 503, 504, 505, 506, 507, 509, 510, 515, 529, 530, 531, 532, 536, 537, 538, 539, 540, 620, 639, 640, 641, 642, 659, 660, 661, 662

Takamura, N., Kasai, F., Watanabe, M. M. 1988 Differences in the tolerant level of benthic algae to heavy metal - The effects of Cu, Cd, and Zn on the photosynthesis. Res. Rep. Natl. Inst. Environ. Stud., No. 114, 223-232 (in Japanese with English summary).
Strain(s): 71, 305, 329, 411, 412, 413, 434, 504, 531, 538, 641, 642, 662

Otsuki, A., Watanabe, M. M., Sugahara, K. 1987 Chlorophyll pigments in methanol extracts from ten axenic cultured diatoms and three green algae as determined by reverse phase HPLC with fluorometric detection. J. Phycol., 23, 406-414.
Keywords: chlorophyll c complex; chlorophyll pigments; diatoms; field desorption mass spectrometry; methanol extracts; reverse phase HPLC
Strain(s): 16, 56, 71, 157, 225, 534
DOI: 10.1111/j.1529-8817.1987.tb02526.x

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