Strain Data

Strain number		NIES-905
Phylum		Cyanophyta
Class		Cyanophyceae
Scientific name		Planktothrix agardhii (Gomont) Anagnostidis & Komárek
Synonym		Oscillatoria agardhii Gomont 1892; Oscillatoria agardhii f. gomontii Elenkin 1949; Oscillatoria agardhii f. aequicrassa Elenkin 1949; Oscillatoria agardhii f. moebiusii Elenkin 1949; Oscillatoria agardhii f. lemmermannii Elenkin 1949; Oscillatoria agardhii f. wislouchii Elenkin 1949
Former name
Common name		Blue-green alga ; Cyanobacteria
Locality (Date of collection)		Windermere, Cumbria, England, U.K. (1975--)
Latitude / Longitude
Habitat (Isolation source)		Freshwater
History		< Suda, Shoichiro < CCAP
Isolator (Date of isolation)		Jaworski, G. H. M. (1975--)
Identified by		Suda, Shoichiro (Reidentify)
State of strain		Cryopreservation; Unialgal; Clonal; Axenic[2014 Mar]
Culture condition (Preculture condition)		Medium: CT Temperature: 20 C Light intensity: 20-30 µmol photons/m²/sec, L/D cycle: 10L:14D Duration: 1 M
Gene information		Whole-genome ( BJCD00000000 ) , 16S rRNA ( AB045896 LC455659 GQ994999 ) , 16S-23S rRNA ( GQ995017 ) , 23S rRNA ( LC455660 ) , mcyE ( AB638213 ) , gyrB ( GQ995042 ) , rpoB ( GQ995008 ) , rpoC1 ( GQ995067 )
Cell size (min - max)
Organization		Filamentous
Characteristics		Cyanobacterial water bloom (aoko) ; Toxicity ; Planktonic ; Genome decoded strain (Suzuki et al. 2019)
Other strain no.		Other collection strain no. : CCAP 1459/11A
Remarks		Cryopreserved; Axenic; Toxicity
Movie

Reference
Asukabe, H., Akahori, S., Ueno, E., Nakayama, T., Yamashita, R., Arii, S., Harada, K., Imanishi, S. Y. 2020 Cyanobacterial classification with the toxicity using MALDI Biotyper. J. Am. Soc. Mass Spectrom., 31, 1572-1578. Keywords: cyanobacteria; MALDI Biotyper; microcystins; profiling Strain(s): 27, 39, 42, 73, 81, 87, 89, 100, 101, 102, 103, 104, 105, 107, 111, 112, 207, 208, 230, 266, 298, 416, 433, 478, 510, 512, 515, 592, 593, 604, 611, 808, 809, 835, 843, 846, 847, 905, 928, 931, 932, 945, 981, 989, 1025, 1043, 1058, 1061, 1064, 1068, 1069, 1071, 1076, 1085, 1099, 1101, 1105, 1113, 1115, 1126, 1133, 1134, 1135, 1144, 1157, 1215, 1642, 1643, 1652, 1668, 1672, 1673, 1677, 1678, 1698, 2087, 2131, 2412, 2665, 3708, 3733, 3734, 3736, 3755, 3756, 3757 PubMed: 32501712 DOI: 10.1021/jasms.0c00148 Suzuki, S., Yamaguchi, H., Kawachi, M. 2019 Draft genome sequences of three filamentous cyanobacterial strains, Dolichospermum planctonicum NIES-80, Planktothrix agardhii NIES-905, and Sphaerospermopsis reniformis NIES-1949. Microbiol. Resour. Ann.., 8, e00605-19 (article ID). Strain(s): 80, 905, 1949 PubMed: 31649090 DOI: 10.1128/MRA.00605-19 Chiu, Y.-T., Yen, H.-K., Lin, T.-F. 2016 An alternativemethodtoquantify2-MIB producing cyanobacteriain in drinking water reservoirs: Method development and field applications. Environ. Res., 151, 618-627. Keywords: Cyanobacteria; 2-methylisoborneol(2-MIB); 2-MIB-synthesis gene(mibC gene); Tasteandodor; Real-timePCR Strain(s): 81, 512, 824, 905, 2104, 2116 PubMed: 27607443 DOI: 10.1016/j.envres.2016.08.034 Gaget, V., Welker, M., Rippka, R., de Marsac, N. T. 2015 A polyphasic approach leading to the revision of the genus Planktothrix (Cyanobacteria) and its type species, P. agardhii, and proposal for integrating the emended valid botanical taxa, as well as three new species, Planktothrix paucivesiculata sp. nov.^ICNP, Planktothrix tepida sp. nov.^ICNP, Planktothrix serta sp. nov.^ICNP, as genus and species names with nomenclatural standing under th ICNP. Syst. Appl. Microbiol., 38, 141-158. Keywords: Polyphasic taxonomy; 16S rRNA gene; ITS; MLST; gyrB; rpoB; rpoC1; Planktothrix Anagnostidis & Komárek 1988^ICN emend. gen. nov. ^ICNP Strain(s): 905, 928, 1266 DOI: 10.1016/j.syapm.2015.02.004 Hodoki, Y., Ohbayashi, K., Kobayashi, Y., Okuda, N., Nakano, S. 2012 Detection and identiﬁcation of potentially toxic cyanobacteria: Ubiquitous distribution of Microcystis aeruginosa and Cuspidothrix issatschenkoi in Japanese lakes. Harmful Algae, 16, 49-57. Keywords: Anatoxin-a; Automated rRNA intergenic spacer analysis (ARISA); Cuspidothrix issatschenkoi; Cyanotoxin; Microcystin; Microcystis aeruginosa Strain(s): 30, 40, 77, 102, 111, 230, 512, 843, 905, 928, 932, 937, 991, 1645, 1669, 1698, 1729, 1950, 2116 DOI: 10.1016/j.hal.2012.01.003 Suda, S., Watanabe, M. M., Otsuka, S., Mahakahant, A., Yongmanitchai, W., Nopartnaraporn, N., Liu, Y., Day, J. G. 2002 Taxonomic revision of water-bloom-forming species of oscillatorioid cyanobacteria. Int. J. Syst. Evol. Microbiol., 52, 1577-1595. Keywords: cyanobacteria; water bloom; oscillatorioid; nomenclature; taxonomy Strain(s): 204, 205, 207, 594, 595, 596, 610, 844, 845, 846, 847, 905, 911, 912, 913, 915, 916, 917, 918 PubMed: 12361260 DOI: 10.1099/00207713-52-5-1577 Sano, T., Usui, T., Ueda, K., Osada, H., Kaya, K. 2001 Isolation of new protein phosphatase inhibitors from two cyanobacteria species, Planktothrix spp. J. Nat. Prod., 64, 1052-1055. Strain(s): 905, 928 PubMed: 11520225 DOI: 10.1021/np0005356

Reference

Asukabe, H., Akahori, S., Ueno, E., Nakayama, T., Yamashita, R., Arii, S., Harada, K., Imanishi, S. Y. 2020 Cyanobacterial classification with the toxicity using MALDI Biotyper. J. Am. Soc. Mass Spectrom., 31, 1572-1578.
Keywords: cyanobacteria; MALDI Biotyper; microcystins; profiling
Strain(s): 27, 39, 42, 73, 81, 87, 89, 100, 101, 102, 103, 104, 105, 107, 111, 112, 207, 208, 230, 266, 298, 416, 433, 478, 510, 512, 515, 592, 593, 604, 611, 808, 809, 835, 843, 846, 847, 905, 928, 931, 932, 945, 981, 989, 1025, 1043, 1058, 1061, 1064, 1068, 1069, 1071, 1076, 1085, 1099, 1101, 1105, 1113, 1115, 1126, 1133, 1134, 1135, 1144, 1157, 1215, 1642, 1643, 1652, 1668, 1672, 1673, 1677, 1678, 1698, 2087, 2131, 2412, 2665, 3708, 3733, 3734, 3736, 3755, 3756, 3757
PubMed: 32501712
DOI: 10.1021/jasms.0c00148

Suzuki, S., Yamaguchi, H., Kawachi, M. 2019 Draft genome sequences of three filamentous cyanobacterial strains, Dolichospermum planctonicum NIES-80, Planktothrix agardhii NIES-905, and Sphaerospermopsis reniformis NIES-1949. Microbiol. Resour. Ann.., 8, e00605-19 (article ID).
Strain(s): 80, 905, 1949
PubMed: 31649090
DOI: 10.1128/MRA.00605-19

Chiu, Y.-T., Yen, H.-K., Lin, T.-F. 2016 An alternativemethodtoquantify2-MIB producing cyanobacteriain in drinking water reservoirs: Method development and field applications. Environ. Res., 151, 618-627.
Keywords: Cyanobacteria; 2-methylisoborneol(2-MIB); 2-MIB-synthesis gene(mibC gene); Tasteandodor; Real-timePCR
Strain(s): 81, 512, 824, 905, 2104, 2116
PubMed: 27607443
DOI: 10.1016/j.envres.2016.08.034

Gaget, V., Welker, M., Rippka, R., de Marsac, N. T. 2015 A polyphasic approach leading to the revision of the genus Planktothrix (Cyanobacteria) and its type species, P. agardhii, and proposal for integrating the emended valid botanical taxa, as well as three new species, Planktothrix paucivesiculata sp. nov.^ICNP, Planktothrix tepida sp. nov.^ICNP, Planktothrix serta sp. nov.^ICNP, as genus and species names with nomenclatural standing under th ICNP. Syst. Appl. Microbiol., 38, 141-158.
Keywords: Polyphasic taxonomy; 16S rRNA gene; ITS; MLST; gyrB; rpoB; rpoC1; Planktothrix Anagnostidis & Komárek 1988^ICN emend. gen. nov. ^ICNP
Strain(s): 905, 928, 1266
DOI: 10.1016/j.syapm.2015.02.004

Hodoki, Y., Ohbayashi, K., Kobayashi, Y., Okuda, N., Nakano, S. 2012 Detection and identiﬁcation of potentially toxic cyanobacteria: Ubiquitous distribution of Microcystis aeruginosa and Cuspidothrix issatschenkoi in Japanese lakes. Harmful Algae, 16, 49-57.
Keywords: Anatoxin-a; Automated rRNA intergenic spacer analysis (ARISA); Cuspidothrix issatschenkoi; Cyanotoxin; Microcystin; Microcystis aeruginosa
Strain(s): 30, 40, 77, 102, 111, 230, 512, 843, 905, 928, 932, 937, 991, 1645, 1669, 1698, 1729, 1950, 2116
DOI: 10.1016/j.hal.2012.01.003

Suda, S., Watanabe, M. M., Otsuka, S., Mahakahant, A., Yongmanitchai, W., Nopartnaraporn, N., Liu, Y., Day, J. G. 2002 Taxonomic revision of water-bloom-forming species of oscillatorioid cyanobacteria. Int. J. Syst. Evol. Microbiol., 52, 1577-1595.
Keywords: cyanobacteria; water bloom; oscillatorioid; nomenclature; taxonomy
Strain(s): 204, 205, 207, 594, 595, 596, 610, 844, 845, 846, 847, 905, 911, 912, 913, 915, 916, 917, 918
PubMed: 12361260
DOI: 10.1099/00207713-52-5-1577

Sano, T., Usui, T., Ueda, K., Osada, H., Kaya, K. 2001 Isolation of new protein phosphatase inhibitors from two cyanobacteria species, Planktothrix spp. J. Nat. Prod., 64, 1052-1055.
Strain(s): 905, 928
PubMed: 11520225
DOI: 10.1021/np0005356

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