| Strain number | NIES-2095 | |||
|---|---|---|---|---|
| Phylum | Cyanophyta | |||
| Class | Cyanophyceae | |||
| Scientific name | Anabaena variabilis Kützing ex Bornet & Flahault | |||
| Synonym | ||||
| Former name | ||||
| Common name | Blue-green alga ; Cyanobacteria | |||
| Locality (Date of collection) | ||||
| Latitude / Longitude | ||||
| Habitat (Isolation source) | Freshwater | |||
| History | < IAM (2007) < Fujiwara, Shoko (1990) | |||
| Isolator (Date of isolation) | ||||
| Identified by | ||||
| State of strain | Subculture; Unialgal; Clonal; Axenic[2018 Jan] | |||
|
Culture condition (Preculture condition) |
Medium:
MDM (agar)
Temperature: 20 C Light intensity: 9-12 µmol photons/m2/sec, L/D cycle: 10L:14D Duration: 4 M |
|||
| Gene information | Whole-genome ( CP000117 ) , 16S rRNA ( AB074502 ) , gyrB ( AB074766 ) , rpoC1 ( AB074789 ) , rpoD1 ( AB074816 ) | |||
| Cell size (min - max) | ||||
| Organization | Filamentous | |||
| Characteristics | Genome decoded strain (Thiel et al. 2014) | |||
| Other strain no. |
Other collection strain no. : IAM M-204; ATCC 29413
|
|||
| Remarks | Axenic | |||
| Movie | ||||
| Reference |
|---|
|
Tamamizu, K. & Kumazaki, S.
2019
Spectral microscopic imaging of heterocysts and vegetative cells in two filamentous cyanobacteria based on spontaneous Raman scattering and photoluminescence by 976 nm excitation.
Biochim. Biophys. Acta-Bioenerg.,
1860,
78-88.
Keywords: Heterocystous cyanobacteria; Raman scattering microscopy; Anabaena variabilis; Rivularia; Photosystems; Thylakoid membranes Strain(s): 2095, 2160 PubMed: 30414930 DOI: 10.1016/j.bbabio.2018.11.012 Morsy, F. M., Elbadry, M., El-Sayed, W. S., Abd El-Hady, D. 2019 Dark and photofermentation H2 production from hydrolyzed biomass of the potent extracellular polysaccharides producing cyanobacterium Nostoc commune and intracellular polysaccharide (glycogen) enriched Anabaena variabil is NIES-2095. Int. J. Hydrog. Energy, 44, 16199-16211. Keywords: Anabaena variabilis; Biohydrogen; Clostridium; Cyanobacterial polysaccharides; Nostoc commune; Rhodobacter capsulatus Strain(s): 2095 DOI: 10.1016/j.ijhydene.2019.05.024 Nozue, S., Katayama, M., Terazima, M., Kumazaki, S. 2017 Comparative study of thylakoid membranes in terminal heterocysts and vegetative cells from two cyanobacteria, Rivularia M-261 and Anabaena variabilis, by fluorescence and absorption spectral microscopy. Biochim. Biophys. Acta-Bioenerg., 1858, 742-749. Keywords: Cyanobacteria; Heterocyst; Thylakoid membrane; Anabaena variabilis; Rivularia; Spectroscopic microscopy Strain(s): 2095 PubMed: 28576442 DOI: 10.1016/j.bbabio.2017.05.007 Nozue, S., Mukuno, A., Tsuda, Y., Shiina, T., Terazima, M., Kumazaki, S. 2016 Characterization of thylakoid membrane in a heterocystous cyanobacterium and green alga with dual-detector fluorescence lifetime imaging microscopy with a systematic change of incident laser power. Biochim. Biophys. Acta-Bioenerg., 1857, 46–59. Keywords: Photosystem II; Photosystem I; Chlorophyll fluorescence; Fluorescence lifetime imaging microscopy; Heterocystous cyanobacteria; Green algae Strain(s): 2095 PubMed: 26474523 DOI: 10.1016/j.bbabio.2015.10.003 Thiel, T., Pratte, B. S., Zhong, J., Goodwin, L., Copeland, A., Lucas, S., Han, C., Pitluck, S., Land, M. L., Kyrpides, N. C., Woyke, T. 2014 Complete genome sequence of Anabaena variabilis ATCC 29413. Stand. Genomic Sci., 9, 562-573. Keywords: Nitrogen Fixation; Joint Genome Institute; Heterotrophic Growth; Anabaena variabilis; Cyanobacterial Genome Strain(s): 2095 PubMed: 25197444 DOI: 10.4056/sigs.3899418 Kumazaki, S., Akari, M., Hasegawa, M. 2013 Transformation of thylakoid membranes during differentiation from vegetative cell into heterocyst visualized by microscopic spectral imaging. Plant Physiol., 161, 1321-1333. Strain(s): 2095 PubMed: 23274239 DOI: 10.1104/pp.112.206680 Makino, T., Harada, H., Ikenaga, H., Matsuda, S., Takaichi, S., Shindo, K., Sandmann, G., Ogata, T., Misawa, N. 2008 Characterization of cyanobacterial carotenoid ketolase CrtW and hydroxylase CrtR by complementation analysis in Escherichia coli. Plant Cell Physiol., 49, 1867-1878. Keywords: Anabaena sp. PCC 7120; β-carotene; carotenoid; CrtR; CrtW; Nostoc punctiforme Strain(s): 2095 PubMed: 18987067 DOI: 10.1093/pcp/pcn169 Takaichi., S., Mochimaru, M., Maoka, T. 2006 Presense of free myxol and 4-hydroxymyxol and absense of myxol glycosides in Anabaena variabilis ATCC 29413, and proposal of a biosynthetic pathway of carotenoids. Plant Cell Physiol., 47, 211-216. Keywords: Anabaena variabilis ATCC 29413; carotenogenesis; carotenoid; 4-hydroxymyxol; myxol Strain(s): 2095 PubMed: 16338959 DOI: 10.1093/pcp/pci236 Seo, P-S. & Yokota, A. 2003 The phylogenetic relationships of cyanobacteria inferred from 16S rRNA, gyrB, rpoC1 and rpoD1 gene sequences. J. Gen. Appl. Micobiol., 49, 191-203. Keywords: cyanobacteria; gyrB; phylogeny; protein evolution; rpoC1; rpoD1; 16S rDNA Strain(s): 19, 21, 22, 25, 39, 104, 2093, 2095, 2128, 3277 PubMed: 12949700 DOI: 10.2323/jgam.49.191 Shiraiwa, Y. & Miyachi, S. 1985 Role of carbonic anhydrase in photosynthesis of blue-green alga (cyanobacterium) Anabaena variabilis ATCC 29413. Plant Cell Physiol., 26, 109-116. Keywords: Anabaena variabilis ATCC 29413; carbonic anhydrase; CO2 effect; CO2 transport; cyanobacterium; photosynthesis Strain(s): 2095 DOI: 10.1093/oxfordjournals.pcp.a076877 |
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