| Strain number | NIES-81 | |||
|---|---|---|---|---|
| Phylum | Cyanophyta | |||
| Class | Cyanophyceae | |||
| Scientific name | Aphanizomenon flos-aquae Ralfs ex Bornet & Flahault f. gracile (Lemmermann) Elenkin | |||
| Synonym | Byssus flos-aquae Linnaeus 1753; Conferva flos-aquae (Linnaeus) Roth 1806; Oscillatoria flos-aquae (Linnaeus) C.Agardh 1812; Nostoc flos-aquae (Linnaeus) Lyngbye 1819; Nostoc papyraceum S.F.Gray 1821; Trichodesmium flos-aquae Ehrenberg 1830; Sphaerozyga flos-aquae (Linnaeus) Corda 1836; Limnochlide flos-aquae (Linnaeus) Kützing 1843; Micraloa flos-aquae (Linnaeus) Trevisan 1845; Trichormus flos-aquae (Linnaeus) Ralfs 1850; Aphanizomenon cyaneum Ralfs ex Bornet & Flahault 1888; Aphanizomenon holsaticum P.G.Richter 1891; Aphanizomenon americanum E.G.Reinhard 1896; Aphanizomenon flos-aquae f. holsaticum (P.G.Richter) Elenkin 1938; Aphanizomenon flos-aquae f. typicum Elenkin 1938 | |||
| Former name | ||||
| Common name | Blue-green alga ; Cyanobacteria | |||
| Locality (Date of collection) | Lake Kasumigaura, Ibaraki, Japan (1978-01-24) | |||
| Latitude / Longitude | 36.0428477398 / 140.373233439 | |||
| Habitat (Isolation source) | Freshwater (Lake water) | |||
| History | < TAC; | |||
| Isolator (Date of isolation) | Watanabe, Masayuki (1978-02-15) | |||
| Identified by | Watanabe, Masayuki | |||
| State of strain | Cryopreservation; Unialgal; Clonal; Axenic[2018 Feb] | |||
|
Culture condition (Preculture condition) |
Medium:
CB
Temperature: 25 C Light intensity: 20-25 µmol photons/m2/sec, L/D cycle: 10L:14D Duration: 20 D |
|||
| Gene information | Whole-genome ( AZYY00000000 ) , 16S rRNA ( AF317632 AJ293131 AY038035 ) , rbcL, rbcX ( AJ293170 ) , ITS1 ( AJ293213 ) | |||
| Cell size (min - max) | - 5 μm | |||
| Organization | Filamentous | |||
| Characteristics | Cyanobacterial water bloom (aoko) ; anatoxin (-) ; saxitoxin (-) ; Offensive odor ; Draft genome sequence (Cao et al. 2014) | |||
| Other strain no. | Other strain no. : TAC 1 (K-TAN-1) | |||
| Remarks | Cryopreserved; Axenic | |||
| Movie | ||||
| Reference |
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Carrell, A. A., Lawrence, T. J., Cabugao, K. G. M., Carper, D. L., Pelletier, D. A., Lee, J. H., Jawdy, S., Grimwood, J., Schmutz, J., Hanson, P. J., Shaw, A. J., Weston, D. J.
2022
Habitat-adapted microbial communities mediate Sphagnum peatmoss resilience to warming.
New Phytol.,
234,
2111-2125.
Keywords: climate change; heat tolerance; microbiome transfer; moss; peatland; Sphagnum; symbiosis; synthetic communities Strain(s): 25, 81, 2098, 2100, 2107 DOI: 10.1111/nph.18072 Monteiro, P. R., do Amaral, S. C., Siqueira, A. S., Xavier, L. P., Santos, A. V. 2021 Anabaenopeptins: What We Know So Far. Toxins, 13, 522 (article ID). Keywords: cyanobacteria; peptide; NRPS; anabaenopeptin Strain(s): 81, 204, 595 PubMed: 34437393 DOI: 10.3390/toxins13080522 Dreher, T. W., Davis, E. W., Mueller, R. S., Otten, T. G. 2021 Comparative genomics of the ADA clade within the Nostocales. Harmful Algae, 104, 102037 (article ID). Keywords: Dolichospermum; Aphanizomenon; Anabaena; Mobilome; Genome synteny; Cyanotoxin genes Strain(s): 80, 81, 806 PubMed: 34023075 DOI: 10.1016/j.hal.2021.102037 Cao, H., Shimura, Y., Steffen, M. M., Yang, Z., Lu, J., Joel, A., Jenkins, L., Kawachi, M., Yin, Y., Garcia-Pichel, F. 2020 The trait repertoire enabling cyanobacteria to bloom assessed through comparative genomic complexity and metatranscriptomics. mBio, 11, e01155-20 (article ID). Keywords: Symbiodiniaceae; Durusdinium trenchii; WGS; MAAs; GMC oxidoreductase Strain(s): 81, 843 PubMed: 32605986 DOI: 10.1128/mBio.01155-20 Pham, T.-L., Bui, M. H., Driscoll, M., Shimizu, K., Motoo, U. 2020 First report of geosmin and 2-methylisoborneol (2-MIB) in Dolichospermum and Oscillatoria from Vietnam. Limnology, 22, 43–56. Keywords: Off-flavour compounds; Taste and odour; Tropical water; Cyanobacteria Strain(s): 19, 33, 81, 814, 1648, 1879 DOI: 10.1007/s10201-020-00630-2 Asukabe, H., Akahori, S., Ueno, E., Nakayama, T., Yamashita, R., Arii, S., Harada, K., Imanishi, S. Y. 2020 Cyanobacterial classification with the toxicity using MALDI Biotyper. J. Am. Soc. Mass Spectrom., 31, 1572-1578. Keywords: cyanobacteria; MALDI Biotyper; microcystins; profiling Strain(s): 27, 39, 42, 73, 81, 87, 89, 100, 101, 102, 103, 104, 105, 107, 111, 112, 207, 208, 230, 266, 298, 416, 433, 478, 510, 512, 515, 592, 593, 604, 611, 808, 809, 835, 843, 846, 847, 905, 928, 931, 932, 945, 981, 989, 1025, 1043, 1058, 1061, 1064, 1068, 1069, 1071, 1076, 1085, 1099, 1101, 1105, 1113, 1115, 1126, 1133, 1134, 1135, 1144, 1157, 1215, 1642, 1643, 1652, 1668, 1672, 1673, 1677, 1678, 1698, 2087, 2131, 2412, 2665, 3708, 3733, 3734, 3736, 3755, 3756, 3757 PubMed: 32501712 DOI: 10.1021/jasms.0c00148 Driscoll, C. B., Meyer, K. A., Šulčius, S., Brown, N. M., Dick, G. J., Cao, H., Gasiūnas, G., Timinskas, A., Yin, Y., Landry, Z. C., Otten, T. G., Davis, T. W., Watson, S. B., Dreher, T. W. 2018 A closely-related clade of globally distributed bloom-forming cyanobacteria within the Nostocales. Harmful Algae, 77, 93-107. Keywords: Genomics; Metagenomics; Filamentous cyanobacteria Strain(s): 81 PubMed: 30005805 DOI: 10.1016/j.hal.2018.05.009 Lin, W., Zhao, D., Luo, J. 2018 Distribution of alkaline phosphatase genes in cyanobacteria and the role of alkaline phosphatase on the acquisition of phosphorus from dissolved organic phosphorus for cyanobacterial growth. J. Appl. Phycol., 30, 839-850. Keywords: Alkaline; phosphatase; Cyanobacteria; Dissolved organic phosphorus; Distribution Strain(s): 30, 39, 81, 2130, 2549, 3756 DOI: 10.1007/s10811-017-1267-3 Kerfeld, CA., Melnicki, MR., Sutter M., Dominguez-Martin, MA. 2017 Structure, function and evolution of the cyanobacterial orange carotenoid protein and its homologs. New Phytol., 215, 937-951. Keywords: carotenoids; carotenoproteins; cyanobacteria; nonphotochemical quenching; photoprotection; phylogenomics; protein structure; singlet oxygen (1O2) quenching Strain(s): 39, 81, 843 PubMed: 28675536 DOI: 10.1111/nph.14670 Chiu, Y.-T., Yen, H.-K., Lin, T.-F. 2016 An alternativemethodtoquantify2-MIB producing cyanobacteriain in drinking water reservoirs: Method development and field applications. Environ. Res., 151, 618-627. Keywords: Cyanobacteria; 2-methylisoborneol(2-MIB); 2-MIB-synthesis gene(mibC gene); Tasteandodor; Real-timePCR Strain(s): 81, 512, 824, 905, 2104, 2116 PubMed: 27607443 DOI: 10.1016/j.envres.2016.08.034 Cao, H., Shimura, Y., Kawachi, M., Yin, Y. 2014 Draft genome sequence of the toxic bloom-forming cyanobacterium Aphanizomenon flos-aquae NIES-81. GenomeA, 2, e00044-14 (article ID). Strain(s): 81 PubMed: 24526634 DOI: 10.1128/genomeA.00044-14 Wacklin, P., Hoffmann, L., Komárek, J. 2009 Nomenclatural validation of the genetically revised cyanobacterial genus Dolichospermum (Ralfs ex Bornet et Flahault) comb. nova. Fottea, 9, 59-64. Keywords: Cyanobacteria; Anabaena; Dolichospermum; taxonomy; nomenclatoric validation Strain(s): 81 Koskenniemi, K., Lyra, C., Rajaniemi-Wacklin, P., Jokela, J., Sivonen, K. 2007 Quantitative real-time PCR detection of toxic Nodularia cyanobacteria in the Baltic Sea. Appl. Environ. Microbiol., 73, 2173-2179. Strain(s): 81, 89, 102 PubMed: 17277219 DOI: 10.1128/AEM.02746-06 Hosoya, R., Hamana, K., Isobe, M., Yokota, A. 2005 Polyamine distribution profiles within Cyanobacteria. Microbiol. Cult. Coll., 21, 3-8. Keywords: cyanobacteria; homospermidine; polyamine; spermidine Strain(s): 19, 21, 22, 28, 30, 34, 37, 41, 44, 45, 50, 73, 78, 79, 80, 81, 204, 208, 510, 512, 515, 592, 593, 610, 843, 846, 847, 2093, 2096, 2098, 2100, 2102, 2107, 2108, 2118, 2119, 2123, 2124, 2125, 2126, 2128, 2129, 2131, 2132, 3259, 3275, 3276, 3277 Jung, J.-M., Lee, Y.-J., Park, H.-K., Jung, E.-Y., Joo, G.-J. 2003 The analysis of cyanobacterial neurotoxins by high-performance liquid chromatography-mass spectrometry. Algae, 18, 233-238. Keywords: anatoxin-a; Aphanizomenon flos-aquae; cyanobacterial toxins; LC-MS; saxitoxin Strain(s): 81 DOI: 10.4490/ALGAE.2003.18.3.23 Hirabayashi, R. & Imamura, N. 2003 Action mechanism of a selective anti-cyanobacterial compound, argimicin A. J. Antibiotics, 56, 154-159. Strain(s): 41, 45, 81, 102, 204, 230, 298, 592 PubMed: 12715875 DOI: 10.7164/antibiotics.56.154 Yamaguchi, T., Kobayashi, Y., Adachi, K., Imamura, N. 2003 Argimicins B and C, new anti-cyanobacterial compounds produced by Sphingomonas sp. M-17. J. Antibiot., 56, 655-657. Strain(s): 45, 81, 102, 230, 298, 592 PubMed: 14513910 DOI: 10.7164/antibiotics.56.655 Gugger, M., Lyra, C., Henriksen, P., Coute, A., Humbert, J.-F., Sivonen, K. 2002 Phylogenetic comparison of the cyanobacterial genera Anabena and Aphanizomenon. Int. J. Syst. Evol. Microbiol., 52, 1867-1880. Keywords: Anabaena; Aphanizomenon; 16S rDNA; 16S-23S rDNA; RubisCO spacer Strain(s): 81 PubMed: 12361299 DOI: 10.1099/00207713-52-5-1867 Yuki, Y., Yoshida, T., Hiroishi, S. 2002 Molecular detection of the toxic cyanobacteria [Yûdoku aoko no bunshi-shikibetsu to yosatsu he-no ôyô]. In Series of Fisheries Science Vol. 143, Prevention and Extermination Strategies of Harmful Algal Blooms [Suisan-gaku shirîzu 134, Yûgai-yûdoku sôrui burûmu no yobô to kujo] , Eds. by Hiroishi, S., Imai, I. & Ishimaru, T., Koseisha-Koseikaku, Tokyo, pp. 43-53 (in Japanese). Strain(s): 73, 81, 87, 88, 89, 90, 91, 98, 99, 100, 101, 102, 104, 105, 106, 108, 109, 110, 111, 112, 204, 230, 298, 299, 604 Mori, F., Erata, M., Watanabe, M. M. 2002 Cryopreservation of cyanobacteria and green algae in the NIES-Collection. Microbiol. Cult. Coll., 18, 45-55. Keywords: cryopreservation; cyanobacteria; green algae; FDA staining method; NIES-Collection Strain(s): 19, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 44, 45, 46, 50, 51, 52, 53, 54, 55, 56, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 73, 74, 75, 76, 77, 78, 79, 80, 81, 87, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 119, 120, 122, 123, 125, 127, 128, 129, 130, 131, 132, 133, 134, 135, 137, 138, 139, 144, 147, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 162, 163, 164, 165, 166, 167, 168, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 185, 186, 187, 188, 189, 191, 192, 193, 194, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 224, 226, 227, 228, 229, 230, 231, 232, 241, 242, 243, 244, 245, 246, 248, 257, 259, 261, 263, 266, 267, 268, 287, 288, 289, 290, 294, 295, 297, 298, 299, 300, 301, 302, 303, 305, 306, 308, 309, 310, 312, 313, 329, 334, 337, 338, 339, 340, 341, 342, 349, 351, 359, 360, 361, 362, 375, 378, 379, 380, 382, 384, 385, 390, 394, 396, 397, 398, 415, 416, 418, 419, 421, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 436, 437, 438, 439, 440, 446, 447, 448, 449, 450, 451, 452, 453, 454, 455, 456, 457, 458, 459, 460, 464, 468, 469, 474, 478, 479, 480, 481, 503, 504, 505, 506, 507, 509, 510, 512, 514, 515, 522, 523, 524, 527, 528, 529, 530, 531, 532, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545, 546, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 592, 593, 594, 595, 596, 597, 598, 604, 610, 628, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649, 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 672, 685, 686, 687, 688, 689, 690, 691, 692, 693, 694, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727, 728, 729 Lyra, C., Suomalainen, S., Gugger, M., Vezie, C., Sundman, P., Paulin, L., Sivonen, K. 2001 Molecular characterization of planktic cyanobacteria of Anabaena, Aphanizomenon, Microcystis and Planktothrix genera. Int. J. Syst. Evol. Microbiol., 51, 13-526. Keywords: cyanobacteria; 16S rRNA gene; RFLP; sequencing; REP; ERIC Strain(s): 41, 44, 73, 79, 81, 89, 98, 102, 104 DOI: 10.1099/00207713-51-2-513 Tillett, D., Neilan, B. A. 2000 Xanthogenate nucleic acid isolation from cultured and environmental cyanobacteria. J. Phycol., 36, 251-258. Keywords: cyanobacteria; DNA extraction; nucleic acids; PCR; xanthogenate Strain(s): 81, 102, 107 DOI: 10.1046/j.1529-8817.2000.99079.x Murakami, M., Suzuki, S., Itou, Y., Kodani, S., Ishida, K. 2000 New anabaenopeptins, potent carboxypeptidase-A inhibitors from the cyanobacterium Aphanizomenon flos-aquae. J. Nat. Prod., 63, 1280-1282. Strain(s): 81 PubMed: 11000037 DOI: 10.1021/np000120k Neilan, B. A., Dittmann, E., Rouhiainen, L., Bass, R. A., Schaub, V., Sivonen, K., Börner, T. 1999 Nonribosomal peptide synthesis and toxigenicity of Cyanobacteria. J. Bacteriol., 181, 4089-4097. Strain(s): 19, 24, 81, 99, 102, 107, 204 PubMed: 10383979 DOI: 10.1128/JB.181.13.4089-4097.1999 Li, R., Yokota, A., Sugiyama, J., Watanabe, M., Hiroki, M., Watanabe, M. M. 1998 Chemotaxonomy of planktonic cyanobacteria based on non-polar and 3-hydroxy fatty acid composition. Phycol. Res., 46, 21-28. Keywords: 3-hydroxy fatty acids; chemotaxonomy; fatty acid; non-polar fatty acids; planktonic cyanobacteria Strain(s): 27, 40, 44, 76, 78, 79, 80, 81, 87, 89, 98, 102, 104, 111, 112, 204, 205, 207, 298, 604, 810, 821, 825, 826 DOI: 10.1111/j.1440-1835.1998.tb00093.x Neilan, B. A., Jacobs, D., Goodman, A. E. 1995 Genetic diversity and phylogeny of toxic cyanobacteria determined by DNA polymorphisms within the phycocyanin locus. Appl. Environ. Microbiol., 61, 3875-3883. Strain(s): 24, 40, 41, 44, 73, 76, 78, 80, 81, 87, 89, 98, 102, 107, 111, 112, 204, 207, 298 PubMed: 8526499 Soma, Y., Imaizumi, T., Yagi, K., Kasuga, S. 1993 Estimation of algal succession in lake water using HPLC analysis of pigments. Can. J. Fish. Aquat. Sci., 50, 1142-1146. Strain(s): 44, 73, 81, 88, 104, 111, 233, 234, 333, 351 Watanabe, M. M., Kasai, F., Hiwatari, T., Suda, S., Nei, T. 1984 Cryopreservation of microalgae in liquid nitrogen - Survival of algal cultures after freezing. Jpn. J. Freez. Dry., 30, 23-26 (in Japanese with English title). Strain(s): 18, 19, 21, 24, 26, 29, 31, 39, 40, 41, 44, 45, 46, 50, 73, 74, 75, 76, 77, 80, 81, 87, 88, 89, 90, 91, 93, 95, 98, 99, 100, 101, 120, 122, 131, 135, 137, 144, 151, 204, 207, 213, 257, 263, 379, 415, 2219, 2235, 2239, 2579 |
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