A big image opens when the thumbnail is clicked.(nies-3808.jpg)
Strain number NIES-3808  
Phylum Dinophyta  
Class Dinophyceae  
Scientific name Breviolum minutum T.C.LaJeunesse, J.E.Parkinson & J.D.Reimer  
Synonym Symbiodinium minutum LaJeunesse, J.E.Parkinson & J.D.Reimer; Zooxanthella minuta (LaJeunesse, J.E.Parkinson & J.D.Reimer) Guiry & R.A.Andersen 2018  
Former name Formerly identified as Symbiodinium minutum, named based on LaJeunesse et al. 2018[2019 Aug]  
Common name Dinoflagellate ; Zooxanthellae  
Locality (Date of collection) Tennessee Reef (Depth -22m), Florida Keys, Florida, USA (2002-10-20)  
Latitude / Longitude 24.74001666 /  
Habitat (Isolation source) Marine (Coral)  
History < Shoguchi, Eiichi < Coffroth, M. A.  
Isolator (Date of isolation) Coffroth, M. A. (2002-10-22)  
Identified by Coffroth, M. A.  
State of strain Cryopreservation; Unialgal; Clonal; Non-axenic  
Culture condition
(Preculture condition)
Medium:  f/2  
Temperature:  20 C
Light intensity:  3 µmol photons/m2/sec, L/D cycle:  10L:14D
Duration:  30 D  
Gene information Whole-genome ( BASF00000000 ) , Plastid minicircle sequences ( JX094304-JX094335 ) , CO1 ( LC002801 ) , CO3 ( LC002802 ) , BAC paired-end sequences ( GA393224-GA453876 ) , Fosmid paired-end sequences ( GA453877-GA605429 )  
Cell size (min - max)  
Organization Unicellular 
Characteristics Symbiotic (corals) ; Genome decoded strain (Shoguchi et al. 2013) ; Clade B  
Other strain no. Other strain no. : Mf1.05b.01  
Remarks Cryopreserved 
Shoguchi, E., Kawachi, M., Shinzato, C., Beedessee, G. 2024 Functional analyses of bacterial genomes found in Symbiodiniaceae genome assemblies. Environ. Microbiol. Rep., 16, e13238 (article ID).
Strain(s): 2907380840764077 
PubMed: 38444256
DOI: 10.1111/1758-2229.13238

Zhou, W., Zhang, X., Wan, A., Yang, L., Gan, Q., Yi, L., Summons, R. E., Volkman, J. K., Lu, Y. 2022 Widespread sterol methyltransferase participates in the biosynthesis of both C4α- and C4β-methyl sterols. J. Am. Chem. Soc., 144, 9023-9032.
Strain(s): 3808 
PubMed: 35561259
DOI: 10.1021/jacs.2c01401

Jiang, J., Lu, Y. 2019 Metabolite profiling of Breviolum minutum in response to acidification. Aquat. Toxicol., 213, 105215 (article ID).
Keywords: Breviolum minutum; Acidification; Metabolomics; LC-MS; Photophysiology; Acclimation
Strain(s): 3808 
PubMed: 31200330
DOI: 10.1016/j.aquatox.2019.05.017

Shoguchi, E., Shinzato, C., Hisata, K., Satoh, N., Mungpakdee, S. 2015 The large mitochondrial genome of Symbiodinium minutum reveals conserved noncoding sequences between dinoflagellates and Apicomplexans. Genome Biol. Evol., 7, 2237-2244.
Keywords: Symbiodinium; Plasmodium; mitochondrial genome expansion; RNA editing; gene map; noncoding
Strain(s): 3808 
PubMed: 26199191
DOI: 10.1093/gbe/evv137

Mungpakdee, S., Shinzato, C., Takeuchi, T., Kawashima, T., Koyanagi, R., Hisata, K., Tanaka, M., Goto, H., Fujie, M., Lin, S., Satoh, N., Shoguchi, E. 2014 Massive gene transfer and extensive RNA editing of a symbiotic dinoflagellate plastid genome. Genome Biol. Evol., 6, 1408-1422.
Keywords: RNA editing; plastid-associated genes; dinoflagellate; Symbiodinium minutum; hydropathy; light-harvesting complex proteins; minicircles
Strain(s): 3808 
PubMed: 24881086
DOI: 10.1093/gbe/evu109

Shoguchi, E., Shinzato, C., Kawashima, T., Gyoja, F., Mungpakdee, S., Koyanagi, R., Takeuchi, T., Hisata, K., Tanaka, M., Fujiwara, M., Hamada, M., Seidi, A., Fujie, M., Usami, T., Goto, H., Yamasaki, S., Arakaki, N., Suzuki, Y., Sugano, S., Toyoda, A., Kuroki, Y., Fujiyama, A., Medina, M., Coffroth, M. A., Bhattacharya, D., Satoh, N. 2013 Draft assembly of the Symbiodinium minutum nuclear genome reveals dinoflagellate gene structure. Curr. Biol., 23, 1399–1408.
Strain(s): 3808 
PubMed: 23850284
DOI: 10.1016/j.cub.2013.05.062

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