Strain number | NIES-4106 | |||
---|---|---|---|---|
Phylum | Cyanophyta | |||
Class | Cyanophyceae | |||
Scientific name | Pelatocladus sp. | |||
Synonym | ||||
Former name | Formerly identified as Fischerella sp., named based on Casamatta et al. 2020[2020 Mar] | |||
Common name | Blue-green alga ; Cyanobacteria | |||
Locality (Date of collection) | Hagiu, Futtsu, Chiba, Japan (2007-**-**) | |||
Latitude / Longitude | 35.197863 / 139.827151 | |||
Habitat (Isolation source) | Terrestrial (Soil) | |||
History | < Katayama, Mitsunori | |||
Isolator (Date of isolation) | Katayama, Mitsunori (2009-**-**) | |||
Identified by | Katayama, Mitsunori | |||
State of strain | Cryopreservation; Unialgal; Clonal; Axenic[2017 May] | |||
Culture condition (Preculture condition) |
Medium:
BG-11 (agar)
Temperature: 20 C Light intensity: 7 µmol photons/m2/sec, L/D cycle: 10L:14D Duration: 2 M |
|||
Gene information | Whole-genome ( AP018300 ) , Plasmid DNA ( AP018299-AP018306 ) | |||
Cell size (min - max) | ||||
Organization | ||||
Characteristics | Nitrogen fixation ; Attached ; Genome decoded strain | |||
Other strain no. | Other strain no. : CIT040 | |||
Remarks | Cryopreserved; Axenic | |||
Movie |
Reference |
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Arsın, S., Delbaje, E., Jokela, J., Wahlsten, M., Farrar, Z. M., Permi, P., Fewer, D.
2023
A plastic biosynthetic pathway for the production of structurally distinct microbial sunscreens.
ACS Chem. Biol.,
18,
1959–1967.
Strain(s): 25, 73, 267, 2100, 2107, 2109, 2111, 2130, 3755, 3756, 3757, 3974, 4073, 4102, 4103, 4105, 4106 PubMed: 37603862 DOI: 10.1021/acschembio.3c00112 Yruela, I., Moreno-Yruela, C., Olsen, C. A. 2021 Zn2+-dependent histone deacetylases in plants: Structure and evolution. Trends Plant Sci., 26, 741-757. Keywords: histone deacetylase; epigenetics; plant evolution; ductility; intrinsic disorder; zinc-binding Strain(s): 843, 4106 PubMed: 33461867 DOI: 10.1016/j.tplants.2020.12.011 Hirose, Y., Ohtsubo, Y., Misawa, N., Yonekawa, C., Nagao, N., Shimura, Y., Fujisawa, T., Kanesaki, Y., Katoh, H., Katayama, M., Yamaguchi, H., Yoshikawa, H., Ikeuchi, M., Eki, T., Nakamura, Y., Kawachi, M. 2021 Genome sequencing of the NIES Cyanobacteria collection with a focus on the heterocyst-forming clade. DNA Res., 28, dsab024 (article ID). Keywords: Cyanobacteria; genome; heterocyst; culture collection; taxonomy Strain(s): 19, 21, 22, 23, 25, 37, 50, 73, 267, 806, 932, 2098, 2100, 2107, 2109, 2111, 2130, 2135, 3275, 3585, 3757, 3974, 4073, 4074, 4075, 4101, 4102, 4103, 4106 PubMed: 34677568 DOI: 10.1093/dnares/dsab024 Casamatta, D. A., Villanueva, C. D., Garvey, A. D., Stocks, H. S., Vaccarino, M., Dvořák, P., Hašler, P., Johansen, J. R. 2020 Reptodigitus chapmanii (Nostocales, Hapalosiphonaceae) gen. nov.: a unique Nostocalean (Cyanobacteria) genus based on a polyphasic approach. J. Phycol., 56, 425-436. Keywords: cyanobacteria; Phylogeny; 16S rDNA; systematics Strain(s): 592, 3754, 4106 PubMed: 31837017 DOI: 10.1111/jpy.12954 MacCready, J. S., Basalla, J. L., Vecchiarelli, A. G. 2020 Origin and evolution of carboxysome positioning systems in cyanobacteria. Mol. Biol. Evol., 37, 1434–1451. Strain(s): 21, 22, 25, 26, 30, 39, 44, 73, 87, 88, 267, 592, 806, 843, 932, 970, 2098, 2100, 2107, 2108, 2111, 2549, 3275, 3754, 3756, 3974, 4073, 4074, 4075, 4101, 4103, 4106 PubMed: 31899489 DOI: 10.1093/molbev/msz308 Alcorta, J., Vergara-Barros, P., Antonaru, L. A., Alcamán-Arias, M. E., Nürnberg, D. J., Díez, B. 2019 Fischerella thermalis: a model organism to study thermophilic diazotrophy, photosynthesis and multicellularity in cyanobacteria. Extremophiles, 23, 635–647. Keywords: Fischerella: Mastigocladus: Distribution: Thermophile: Nitrogen fxation: Photosynthesis: Multicellularity: Hot springs Strain(s): 592, 3754, 4106 PubMed: 31512055 DOI: 10.1007/s00792-019-01125-4 |
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