Strain number | NIES-2166 | |||
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Phylum | Chlorophyta | |||
Class | Trebouxiophyceae | |||
Scientific name | Coccomyxa subellipsoidea E.Acton | |||
Synonym | ||||
Former name | Chlorella vulgaris Beijerinck < 'Chlorella' saccharophila (Krüger) Migula | |||
Common name | Green alga | |||
Locality (Date of collection) | Marble Point Antarctica | |||
Latitude / Longitude | ||||
Habitat (Isolation source) | (Dried algal peat) | |||
History | < IAM (2007) < Holm-Hansen, O. | |||
Isolator (Date of isolation) | Holm-Hansen, O. | |||
Identified by | Kessler, E. | |||
State of strain | Cryopreservation; Unialgal; Clonal; Axenic[2018 Feb] | |||
Culture condition (Preculture condition) |
Medium:
C (agar)
Temperature: 20 C Light intensity: 8-15 µmol photons/m2/sec, L/D cycle: 10L:14D Duration: 3 M |
|||
Gene information | Whole-genome ( AGSI00000000 ) | |||
Cell size (min - max) | 3 - 10 μm | |||
Organization | Unicellular | |||
Characteristics | Genome decoded strain (Blanc et al. 2012) | |||
Other strain no. |
Other collection strain no. : IAM C-169
Other strain no. : Holm-Hansen M-42-a |
|||
Remarks | Cryopreserved; Axenic | |||
Movie |
Reference |
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Hamana, K., Furuchi, T., Hayashi, H., Uemura, T., Niitsu, M.
2023
Additional polyamine analysis of the algae belonging to the phyla Glaucophyta, Rhodophyta and Chlorophyta. ─Polyamine analysis of algae V─
Microb. Resour. Syst.,
39,
33-40.
Keywords: alga; Chlorophyta; Glaucophyta; polyamine; Rhodophyta Strain(s): 226, 250, 254, 550, 551, 626, 1298, 1332, 1703, 1836, 2137, 2163, 2164, 2165, 2166, 2252, 2353, 2894, 3377, 3645, 3867, 3891, 3892, 4107, 4390, 4452 Liu, Y. & Wei, D. 2023 Enhancing carbon dioxide fixation and co-production of protein and lutein in oleaginous Coccomyxa subellipsoidea by a stepwise light intensity and nutrients feeding strategy. Bioresour. Technol., 376, 28885 (article ID). Keywords: Coccomyxa subellipsoidea; CO2 fixation; Protein; Lutein; Stepwise feeding Strain(s): 2166 PubMed: 36925078 DOI: 10.1016/j.biortech.2023.128885 Maltsev, Y., Maltseva, I., Maltseva, S., Kociolek, J. P., Kulikovskiy, M. 2021 A new species of freshwater algae Nephrochlamys yushanlensis sp. nov. (Selenastraceae, Sphaeropleales) and its lipid accumulation during nitrogen and phosphorus starvation. J. Phycol., 57, 606-618. Strain(s): 2166 PubMed: 33296071 DOI: 10.1111/jpy.13116 Kania, K., Zienkiewicz, M., Drożak, A. 2020 Stable transformation of unicellular green alga Coccomyxa subellipsoidea C-169 via electroporation. Protoplasma, 257, 607–611. Keywords: Coccomyxa subellipsoidea C-169; Hygromycin B resistance; Electrotransformation; Electroporation; Stable genome transformation Strain(s): 2166 PubMed: 31741062 DOI: 10.1007/s00709-019-01447-2 Hashizume, M., Yoshida, M., Demura, M., Watanabe, M. M. 2020 Culture study on utilization of phosphite by green microalgae. J. Appl. Phycol., 32, 889–899. Keywords: Phosphite utilization; Chlorella vulgaris; Coccomyxa subellipsoidea Strain(s): 2166, 2170, 2280 DOI: 10.1007/s10811-020-02088-2 Maltsev, Y., Maltseva, I., Maltseva, S., Kociolek, J. P., Kulikovskiy, M. 2019 Fatty acid content and profile of the novel strain of Coccomyxa elongata (Trebouxiophyceae, Chlorophyta) cultivated at reduced nitrogen and phosphorusconcentrations. J. Phycol., 55, 1154-1165. Keywords: Coccomyxa; fatty acid profile lipid; nitrogen and phosphorus deprivation; Trebouxiophyceae Strain(s): 2166, 2252, 2353 PubMed: 31318981 DOI: 10.1111/jpy.12903 Hamada, M., Schröder, K., Bathia, J., Kürn, U., Fraune, S., Khalturina, M., Khalturin, K., Shinzato, C., Satoh, N., Bosch, T. C.G. 2018 Metabolic co-dependence drives the evolutionary ancient Hydra-Chlorella symbiosis. eLife, 7, e35122 (article ID). Keywords: Chlorella; Hydra; evolutionary biology; genome; nitrogen metabolism; symbiosis Strain(s): 2166, 2235, 2541 PubMed: 29848439 DOI: 10.7554/eLife.35122 Ranjan, P. & Kateriya, S. 2018 Localization and dimer stability of a newly identifed microbial rhodopsin from apolar, non-motile green algae. BMC Res. Notes, 11, 65 (article ID). Keywords: Coccomyxa subellipsoidea; Proton-pumping rhodopsin; Optogenetics; Localization of the microbial rhodopsin in eukaryotes; Chlorella vulgaris Strain(s): 2166 PubMed: 29361974 DOI: 10.1186/s13104-018-3181-4 Zongyi, Y., Lu, L., Chen, J., Wei, D. 2018 Effect of crude glycerol on heterotrophic growth of Chlorella pyrenoidosa and Coccomyxa subellipsoidea C-169. J. Appl. Phycol., 30, 2989–2996. Keywords: Chlorophyceae; Microalgae; Crude glycerol; Heterotrophic growth; Biodiesel Strain(s): 2166 DOI: 10.1007/s10811-018-1551-x Bertuzz, S., Gustavs, L., Pandolfini, G., Tretiac, M. 2017 Heat shock treatments for the control of lithobionts: A case study with epilithic green microalgae. Int. Biodeterior. Biodegrad., 123, 236-243. Keywords: Biocides; Biodeteriogens; Chlorophyll a fluorescence; Hydration; Polyols; Non-reducing sugars Strain(s): 2166 DOI: 10.1016/j.ibiod.2017.06.023 Wang, C., Wang, Z., Luo, F., Li, Y. 2017 The augmented lipid productivity in an emerging oleaginous model alga Coccomyxa subellipsoidea by nitrogen manipulation strategy. World J. Microbiol. Biotechnol., 33, 160 (article ID). Keywords: Coccomyxa subellipsoidea; Nitrogen manipulation; Lipid; Fatty acids; Metabolites Strain(s): 2166 PubMed: 28752265 DOI: 10.1007/s11274-017-2324-4 Peng, H., Wei, D., Chen, G., Chen, F. 2016 Transcriptome analysis reveals global regulation in response to CO2 supplementation in oleaginous microalga Coccomyxa subellipsoidea C-169. Biotechnol. Biofuels, 9, 151 (article ID). Keywords: Coccomyxa subellipsoidea C-169; Elevated CO2; Lipid accumulation; Transcriptomic analysis; Phosphoenolpyruvate carboxylase; Pyruvate carboxylase; Carbamoyl-phosphate synthetase II; Ferredoxin; Vacuolar; H+-ATPase Strain(s): 2166 PubMed: 27453726 DOI: 10.1186/s13068-016-0571-5 Pfaff, S., Borchhardt, N., Boy, J., Karsten, Ulf., Gustavs, L. 2016 Desiccation tolerance and growth-temperature requirements of Coccomyxa (Trebouxiophyceae, Chlorophyta) strains from Antarctic biological soil crusts. Algol. Stud., 151/152, 3-19. Keywords: Antarctica; biological soil crusts; ecophysiology; desiccation; cold adaptation; endemis Strain(s): 2166 DOI: 10.1127/algol_stud/2016/0245 Lemieux, C., Otis, C.,Turmel, M. 2014 Chloroplast phylogenomic analysis resolves deep-level relationships within the green algal class Trebouxiophyceae. BMC Evol. Biol., 14, 211 (article ID). Keywords: Chlorophyta; Trebouxiophyceae; Plastid genome; Phylogenomics Strain(s): 1824, 2166 PubMed: 25270575 DOI: 10.1186/s12862-014-0211-2 Blanc, G., Agarkova, I., Grimwood, J., Kou, A., Brueggeman, A., Dunigan, D. D., Gurnon, J., Ladunga, I., Lindquist, E., Lucas, S., Pangilinan, J., Proschold, T., Salamov, A., Schmutz, J., Weeks, D., Yamada, T., Lomsadze, A., Borodovsky, M., Claverie, J. M., Grigoriev, I. V., Van Etten, J. L. 2012 The genome of the polar eukaryotic microalga Coccomyxa subellipsoidea reveals traits of cold adaptation. Genome Biol., 13, R39 (article ID). Strain(s): 2166 PubMed: 22630137 DOI: 10.1186/gb-2012-13-5-r39 Smith, D. R., Burki, F., Yamada, T., Grimwood, J., Grigoriev, I. V., Van Etten, J. L., Keeling, P. J. 2011 The GC-rich mitochondrial and plastid genomes of the green alga Coccomyxa give insight into the evolution of organelle DNA nucleotide landscape. PLoS One, 6, e23624 (article ID). Strain(s): 2166 PubMed: 21887287 DOI: 10.1371/journal.pone.0023624 Higashiyama, T. & Yamada, T. 1991 Electrophoretic karyotyping and chromosomal gene mapping of Chlorella. Nucleic Acids Res., 19, 6191-6195. Strain(s): 2163, 2166, 2171, 2189 PubMed: 1956777 DOI: 10.1093/nar/19.22.6191 Yamada, T. & Sakaguchi, K. 1982 Comparative studies on Chlorella cell walls: Induction of protoplast formation. Arch. Mikrobiol., 132, 10-13. Strain(s): 227, 686, 2159, 2163, 2166, 2168, 2171, 2189, 2352 DOI: 10.1007/BF00690809 |
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