Strain number | NIES-23 | |||
---|---|---|---|---|
Phylum | Cyanophyta | |||
Class | Cyanophyceae | |||
Scientific name | Anabaena variabilis Kützing ex Bornet & Flahault | |||
Synonym | ||||
Former name | ||||
Common name | Blue-green alga ; Cyanobacteria | |||
Locality (Date of collection) | ||||
Latitude / Longitude | ||||
Habitat (Isolation source) | ||||
History | < IAM (1983); | |||
Isolator (Date of isolation) | ||||
Identified by | ||||
State of strain | Cryopreservation; Unialgal; Clonal; Axenic[2017 Dec] | |||
Culture condition (Preculture condition) |
Medium:
MDM (agar)
Temperature: 20 (25) C Light intensity: 6-8 (14-16) µmol photons/m2/sec, L/D cycle: 10L:14D Duration: 4 M (14 D) |
|||
Gene information | Whole-genome ( AP018216 ) , 16S rRNA ( AF247593 ) , plasmid DNA ( AP018217 ) | |||
Cell size (min - max) | 4 - 8 μm | |||
Organization | Filamentous | |||
Characteristics | Genome decoded strain | |||
Other strain no. |
Other collection strain no. : IAM M-2
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Remarks | Cryopreserved; Axenic | |||
Movie |
Reference |
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Tawfik, A., Niaz, H., Qadeer, K., Qyyum, M. A., Liu, J. J., Lee, M.
2022
Valorization of algal cells for biomass and bioenergy production from wastewater: Sustainable strategies, challenges, and techno-economic limitations.
Renew. Sust. Energ. Rev.,
157,
112024 (article ID).
Keywords: Xenobiotic compounds; Micro-pollutants; Enzyme activity; Biomass; Bioenergy; Algae-based wastewater treatment Strain(s): 19, 23, 44, 226, 422, 437, 2169, 2220, 3284 DOI: 10.1016/j.rser.2021.112024 Tamre, E. & Fournier, G. P. 2022 Inferred ancestry of scytonemin biosynthesis proteins in cyanobacteria indicates a response to Paleoproterozoic oxygenation. Geobiology, 20, 764–775. Keywords: Bayesian phylogenetics; cyanobacteria; Paleoproterozoic; photoprotection; scytonemin; UVA radiation Strain(s): 21, 23, 25, 26, 267, 2108, 2111, 3756, 4073, 4074, 4075, 4103 PubMed: 35851984 DOI: 10.1111/gbi.12514 Jeong, S.-Y. & Son, H.-J. 2021 Effects of mycosubtilin homolog algicides from a marine bacterium, Bacillus sp. SY-1, against the harmful algal bloom species Cochlodinium polykrikoides. J. Microbiol., 59, 389-400. Keywords: algicide; Bacillus sp. SY-1; Cochlodinium polykrikoides; harmful algal bloom; mycosubtilin Strain(s): 23, 227, 238, 298, 316, 446, 682 PubMed: 33779952 DOI: 10.1007/s12275-021-1086-8 Hirose, Y., Ohtsubo, Y., Misawa, N., Yonekawa, C., Nagao, N., Shimura, Y., Fujisawa, T., Kanesaki, Y., Katoh, H., Katayama, M., Yamaguchi, H., Yoshikawa, H., Ikeuchi, M., Eki, T., Nakamura, Y., Kawachi, M. 2021 Genome sequencing of the NIES Cyanobacteria collection with a focus on the heterocyst-forming clade. DNA Res., 28, dsab024 (article ID). Keywords: Cyanobacteria; genome; heterocyst; culture collection; taxonomy Strain(s): 19, 21, 22, 23, 25, 37, 50, 73, 267, 806, 932, 2098, 2100, 2107, 2109, 2111, 2130, 2135, 3275, 3585, 3757, 3974, 4073, 4074, 4075, 4101, 4102, 4103, 4106 PubMed: 34677568 DOI: 10.1093/dnares/dsab024 Yu, Z., Xu, Q., Xiao, C., Li, H., Wu, W., Du, W., Zhao, J., Liu, H., Wang, H., Liu, C. 2021 SYBR Green real-time qPCR method: Diagnose drowning more rapidly and accurately. Forensic Sci.Int., 321, 110720 (article ID). Keywords: Drowning diagnosis; SYBR Green real-time qPCR; Diatom test; Plankton Strain(s): 23 PubMed: 33639416 DOI: 10.1016/j.forsciint.2021.110720 González-Pleitera, M., Cirésa, S., Hurtado-Gallego, J., Leganés, F., Fernández-Piñas, F., Velázquez, D. 2019 Chapter 20 - Ecotoxicological assessment of antibiotics in freshwater using cyanobacteria. In Cyanobacteria: From Basic Science to Applications, Eds. by Mishra, A. K., Tiwari, D. N., Rai, A. N., Academic Press, pp. 339-417. Keywords: Anabaena; Antibiotics; Biomarker; Bioreporter; Cyanobacteria; Ecotoxicology; Freshwater; Oxidative stress; Risk assessment Strain(s): 19, 23, 44, 107, 843 DOI: 10.1016/B978-0-12-814667-5.00020-9 Ko, S. R., Lee, Y. K., Srivastava, A., Park, S. H., Ahn, C. Y., Oh, H. M. 2019 The selective inhibitory activity of a fusaricidin derivative on a bloom-Forming cyanobacterium, Microcystis sp. J. Microbiol. Biotechnol., 29, 59-65. Keywords: Bloom control; cyanobacteria; fusaricidin; Microcystis; Paenibacillus polymyxa Strain(s): 23, 94 PubMed: 30394041 DOI: 10.4014/jmb.1804.04031 Lee, Y.-K., Ahn, C.-Y., Kim, H.-S., Oh, H.-M. 2010 Cyanobactericidal effect of Rhodococcus sp. isolated from eutrophic lake on Microcystis sp. Biotechnol. Lett., 32, 1673-1678. Keywords: Algicide; Bloom; Cyanobacteria; Microcystis; Rhodococcus Strain(s): 23, 843 PubMed: 20640876 DOI: 10.1007/s10529-010-0350-5 Susilaningsih, D. 2007 Accelerating of pink pigment excretion from cyanobacterium Oscillatoria by Co-Cultivation with Anabaena. HHAYATI J. Biosci., 14, 18-22. Keywords: Oscillatoria; Anabaena variabilis; biosurfactant; cyanobacterium; pink pigment Strain(s): 19, 23, 44, 422 Sakai, H., Oguma, K., Katayama, H., Ohgaki, S. 2007 Effects of low- or medium-pressure ultraviolet lamp irradiation on Microcystis aeruginosa and Anabaena variabilis. Water Res., 41, 11-18. Keywords: Microcystis aeruginosa; Anabaena variabilis; Low-pressure ultraviolet lamp; Medium-pressure ultraviolet lamp; DNA damage; Photosynthetic activity Strain(s): 23, 98 PubMed: 17097715 DOI: 10.1016/j.watres.2006.09.025 Ando, T., Nagase, H., Eguchi, K., Hirooka, T., Nakamura, T., Miyamoto, K., Hirata, K. 2007 A novel method using cyanobacteria for ecotoxicity test of veterinary antimicrobial agents. Environ. Toxicol. Chem., 26, 601-606. Keywords: Antimicrobial agent; Cyanobacterium; Ecotoxicity test; Algal toxicity Strain(s): 19, 23, 44, 107, 3277 PubMed: 17447543 DOI: 10.1897/06-195R.1 Hirooka, T., Nagase, H., Hirata, K., Miyamoto, K. 2006 Degradation of 2,4-dinitrophenol by a mixed culture of photoautotrophic microorganisms. Biochem. Eng. J., 29, 157-162. Keywords: 2,4-Dinitrophenol; 2-Amino-4-nitrophenol; Anabaena variabilis; Anabaena cylindrica; Mixed culture Strain(s): 19, 23, 3284 DOI: 10.1016/j.bej.2005.03.018 Nagase, H., Hirooka, T., Ehara, Y., Yamashita, R, Tanimoto, S., Hirata, K., Miyamoto, K. 2005 NOx removal system for exhaust gas using freshwater microalgae. J. Environ. Biotechnol., 5, 37-41 (in Japanese with English summary). Keywords: microalgae; nitrogen oxides; treatment of exhaust gas; NO sensor; reactor Strain(s): 23 Nagase, H., Inthorn, D., Oda, A., Nishimura, J., Kajiwara, Y., Park, M.-O., Hirata, K., Miyamoto, K. 2005 Improvement of selective removal of heavy metals in cyanobacteria by NaOH treatment. J. Biosci. Bioeng., 99, 372-377. Keywords: cyanobacteria; cadmium; zinc; copper; lead; hard water Strain(s): 23, 44 PubMed: 16233804 DOI: 10.1263/jbb.99.372 Sakai, H., Ogawa, K., Katayama, H., Ohgaki, S. 2005 Growth inhibition of Anabaena variabilis by low- or medium-pressure UV lamp irradiation. Environ. Eng. Res., 42, 495-501 (in Japanese with English summary). Keywords: growth inhibition; Anabaena variabilis; UV irradiation; model calculation Strain(s): 23 Hirooka, T., Akiyama, Y., Tsuji, N., Nakamura, T., Nagase, H., Hirata, K., Miyamoto, K. 2003 Removal of hazardous phenols by microalgae under photoautotrophic conditions. J. Biosci. Bioeng., 95, 200-203. Keywords: green algae; cyanobacteria; nitrophenol; chlorophenol; bisphenol A; photoautotrophic conditions Strain(s): 19, 23, 44, 422, 437 PubMed: 16233393 DOI: 10.1016/S1389-1723(03)80130-5 Sakai, M., Hosoda, A., Kanazawa, S. 2003 Isolation and characterization of two cyanobacteria-lytic bacterial strains from the submerged paddy soil. J. soci. soil. microbiol., 57, 21-28 (in Japanese with English summary). Keywords: Cyanobacteria; Lytic bacteria; Paddy field; Anabaena Strain(s): 19, 23, 37 DOI: 10.18946/jssm.57.1_21 Mori, F., Erata, M., Watanabe, M. M. 2002 Cryopreservation of cyanobacteria and green algae in the NIES-Collection. Microbiol. Cult. Coll., 18, 45-55. Keywords: cryopreservation; cyanobacteria; green algae; FDA staining method; NIES-Collection Strain(s): 19, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 44, 45, 46, 50, 51, 52, 53, 54, 55, 56, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 73, 74, 75, 76, 77, 78, 79, 80, 81, 87, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 119, 120, 122, 123, 125, 127, 128, 129, 130, 131, 132, 133, 134, 135, 137, 138, 139, 144, 147, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 162, 163, 164, 165, 166, 167, 168, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 183, 185, 186, 187, 188, 189, 191, 192, 193, 194, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 224, 226, 227, 228, 229, 230, 231, 232, 241, 242, 243, 244, 245, 246, 248, 257, 259, 261, 262, 263, 266, 267, 268, 287, 288, 289, 290, 294, 295, 297, 298, 299, 300, 301, 302, 303, 305, 306, 308, 309, 310, 312, 313, 329, 334, 337, 338, 339, 340, 341, 342, 349, 351, 359, 360, 361, 362, 375, 378, 379, 380, 382, 384, 385, 390, 394, 396, 397, 398, 415, 416, 418, 419, 421, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 436, 437, 438, 439, 440, 446, 447, 448, 449, 450, 451, 452, 453, 454, 455, 456, 457, 458, 459, 460, 464, 468, 469, 474, 478, 479, 480, 481, 503, 504, 505, 506, 507, 509, 510, 512, 514, 515, 522, 523, 524, 527, 528, 529, 530, 531, 532, 536, 537, 538, 539, 540, 541, 542, 543, 544, 545, 546, 564, 565, 566, 567, 568, 569, 570, 571, 572, 573, 574, 575, 576, 577, 578, 579, 580, 581, 582, 583, 584, 585, 592, 593, 594, 595, 596, 597, 598, 604, 610, 628, 630, 631, 632, 633, 634, 635, 636, 637, 638, 639, 640, 641, 642, 643, 644, 645, 646, 647, 648, 649, 650, 651, 652, 653, 654, 655, 656, 657, 658, 659, 660, 661, 662, 663, 664, 665, 666, 667, 672, 685, 686, 687, 688, 689, 690, 691, 692, 693, 694, 717, 718, 719, 720, 721, 722, 723, 724, 725, 726, 727, 728, 729 Kodani, S., Imoto, A., Mitsutani, A., Murakami, M. 2002 Isolation and identification of the antialgal compound, harmane (1-methyl-B-carboline), produced by the algicidal bacterium, Pseudomonas sp. K44-1. J. Appl. Phycol., 14, 109-114. Keywords: Algicidal bacteria; Antialgal compound; Cyanobacteria; Harmane; Pseudomonas sp.; Water bloom Strain(s): 19, 23, 102, 227, 299, 446, 506 DOI: 10.1023/A:1019533414018 Dwi, S., Hirata, K., Asada, Y., Miyamoto, K. 2001 Utilization of cyanobacterial biomass from water bloom for bioproduction of lactic acid. World J. Microbiol. Biotech., 17, 259-264. Keywords: cyanobacterium; CO2 supplementation; lactic acid; Lactobacillus agilis; L. amylovorus; L. ruminis; starch; water bloom Strain(s): 23, 44 DOI: 10.1023/A:1016638619 Beltran, E. C., Neilan, B. 2000 Geographical segregation of the neurotoxin-producing cyanobacterium Anabaena circinalis. Appl. Environ. Microbiol., 66, 4468-4474. Strain(s): 19, 21, 23, 40, 41, 80 PubMed: 11010900 DOI: 10.1128/AEM.66.10.4468-4474.2000 Nagase, H., Inthorn, D., Isaji, Y., Oda, A., Hirata, K., Miyamoto, K. 1997 Selective cadmium removal from hard water using NaOH-treated cells of the cyanobacterium Tolypothrix tenuis. J. Ferment. Bioeng., 84, 151-154. Keywords: cyanobacteria; cadmium; calcium; magnecium; hard water; sodium hydroxide Strain(s): 23 DOI: 10.1016/S0922-338X(97)82545-7 Asada, Y. & Kawamura, S. 1986 Screening for cyanobacteria that evolve molecular hydrogen under dark and anaerobic conditions. J. Ferment. Technol., 64, 553-556. Strain(s): 19, 21, 23, 36, 39, 46, 2119, 3277 DOI: 10.1016/0385-6380(86)90081-6 Ichimura, T. & Itoh, T. 1977 17. Preservation methods of microalgae (I) [17. Bisaisôrui no hozonhô (I)]. In Preservation methods of microorganisms [Biseibutsu Hozonhô], Ed. by Nei, T., University of Tokyo Press, Tokyo, pp. 355-373 (in Japanese). Strain(s): 19, 21, 22, 23, 24, 27, 28, 30, 31, 32, 33, 34, 36, 37, 38, 39, 40, 41, 44, 45, 46, 47, 48, 49, 50, 122, 123, 127, 131, 144, 152, 173, 175, 179, 180, 181, 182, 183, 185, 198, 200, 203, 206, 217, 226, 227, 241, 266, 267, 268, 295, 309, 310, 334, 338, 379, 436, 448, 450, 455, 527 Fujita, Y. 1976 The C550 photoresponse at room temperature observed in membrane fragments of the blue-green alga Anabaena variabilis. Plant Cell Physiol., 17, 187-191. Strain(s): 23 DOI: 10.1093/oxfordjournals.pcp.a075258 Fujita, Y. 1975 Further investigation of the light-induced cytochrome b-559 reaction in membrane fragments of the blue-green alga Anabaena variabilis. Plant Cell Physiol., 16, 1037-1048. Strain(s): 23 DOI: 10.1093/oxfordjournals.pcp.a075223 Fujita, Y. 1974 The light-induced oxidation-reduction reaction of cytochrome b-559 in membrane fragments of the blue-green alga Anabaena variabilis. Plant Cell Physiol., 15, 861-874. Strain(s): 23 DOI: 10.1093/oxfordjournals.pcp.a075075 Fujita, Y. & Suzuki, R. 1973 Studies on the Hill reaction of membrane fragments of blue-green algae III. Fluorescence characteristics of membrane fragments of Anabaena variabilis and Anabaena cylindrica. Plant Cell Physiol., 14, 249-260. Strain(s): 19, 23 Fujita, Y. & Suzuki, R. 1973 Studies on the Hill reaction of membrane fragments of blue-green algae IV. Carotenoid photobleaching induced by photosystem II action. Plant Cell Physiol., 14, 261-273. Strain(s): 19, 23 Suzuki, R. & Fujita, Y. 1972 Studies on the Hill reaction of membrane fragments of blue-green algae II. The reaction steps inactivated at high water concentration. Plant Cell Physiol., 13, 427-436. Strain(s): 19, 23 Tsuji, T. & Fujita, Y. 1972 Electron donor-specificity observed in photosystem I reactions of membrane fragments of the blue-green alga Anabaena variabilis and the higher plant Spinacea oleracea. Plant Cell Physiol., 13, 93-99. Strain(s): 23 Fujita, Y. & Suzuki, R. 1971 Studies on the Hill reaction of membrane fragments of blue-green algae I. Stabilizing effect of various media on the 2,6-dichlorophenol indophenol-Hill activity of membrane fragments obtained from Anabaena cylindrica and Anabaena variabilis. Plant Cell Physiol., 12, 641-651. Strain(s): 19, 23 Watanabe, A. 1960 List of algal strains in collection at the Institute of Applied Microbiology, University of Tokyo. J. Gen. Appl. Microbiol., 6, 283-292. Strain(s): 19, 21, 22, 23, 24, 25, 26, 28, 29, 37, 47, 49, 226, 227 |
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