Search Reference

Phylogenetic analysis of NAP, an unconventional actin of the Volvocales. 2015 Phylogenetic analysis of NAP, an unconventional actin of the Volvocales. Plant Syst. Evol., 301, 1725-1733.
Keywords: Volvocales; Divergent actin
Strain(s): 3515465767173374 
DOI: 10.1007/s00606-014-1187-5
Pan, H., Song, L., Liu, Y., Börner, T. 2002 Detection of hepatotoxic Microcystis strains by PCR with intact cells from both culture and environmental samples. Arch. Microbiol., 178, 421-427.
Keywords: Cyanobacteria; Microcystis; Microcystin; Toxin; Peptide synthetase; Whole-cell PCR
Strain(s): 429098101595610 
PubMed: 12420161
DOI: 10.1007/s00203-002-0464-9
Pancrace, C., Ishida, K., Briand, E., Pichi, D. G., Weiz, A. R., Guljamow, A., Scalvenzi, T., Sassoon, N., Hertweck, C., Dittmann, E., Gugger, M. 2019 Unique biosynthetic pathway in bloom-Forming Cyanobacterial genus Microcystis jointly assembles cytotoxic aeruginoguanidines and microguanidines. ACS Chem. Biol., 14, 67-75.
Strain(s): 98843 
PubMed: 30556994
DOI: 10.1021/acschembio.8b00918
Parajuli, A., Kwak, D. H., Dalponte, L., Leikoski, N., Galica, T., Umeobika, U., Trembleau, L., Bent, A., Sivonen, K., Wahlsten, M. 2016 A unique tryptophan c-prenyltransferase from the kawaguchipeptin biosynthetic pathway. Angew. Chem.-Int. Edit., 7, 3596-3599.
Strain(s): 88 
PubMed: 26846478
DOI: 10.1002/anie.201509920
Park, B. S., Baek, S. H., Ki, J.-S., Cattolico, R. A., Han, M.-S. 2012 Assessment of EvaGreen-based quantitative real-time PCR assay for enumeration of the microalgae Heterosigma and Chattonella (Raphidophyceae). J. Appl. Phycol., 24, 1555-1567.
Keywords: Raphidophyceae; Quantitative real-time PCR; EvaGreen; Field application
Strain(s): 293 
DOI: 10.1007/s10811-012-9816-2
Park, B. S., Kim, S., Kim. J.-H., Kim, J. H., Han, M.-S. 2019 Dynamics of Amoebophrya parasites during recurrent blooms of the ichthyotoxic dinoflagellate Cochlodinium polykrikoides in Korean coastal waters. Harmful Algae, 84, 119-126.
Keywords: Amoebophrya; Bloom dynamics; Cochlodinium polykrikoides ; Parasitism; Uantitative real-time PCR
Strain(s): 298 
PubMed: 31128796
DOI: 10.1016/j.hal.2019.02.001
Park, H-D., Hayashi, H. 1994 Microcystis and microcystins [Microcystis zoku to mikuroshisuchin]. In Waterbloom of Blue-green Algae and Their Toxins [Aoko, sono shutsugen to dokuso], Eds. by Watanabe, M. F., Harada,K. & Fujii, H., University of Tokyo Press, pp. 75-99 (in Japanese).
Strain(s): 7374105310541055105910611063106410661067106810701071107210741076107710791080108110831084108510861090109110931095109710981099114011543349 
Park, H-D., Watanabe, M. F. 1996 Toxic Microcystis in eutrophic lakes. In Toxic Microcystis, Eds. by Watanabe, M.F., Harada, K., Carmichael W.W. & Fujii, H., CRC Press, Boca Raton, pp. 57-77.
Strain(s): 737410631074107910851086109011543349 
Park, H-D., Watanabe, M. F., Harada, K., Nagai, H., Suzuki, M., Watanabe, M., Hayashi, H. 1993 Hepatotoxin (microcystin) and neurotoxin (anatoxin-a) contained in natural blooms and strains of cyanobacteria from Japanese freshwaters. Natural Toxins, 1, 353-360.
Keywords: Anabaena; anatoxin-a; neurotoxin; Microcystis; microcystin; hepatotoxin; natural bloom; strain; Japanese freshwaters; simultaneous analysis of anatoxin-a and microcystin
Strain(s): 73741063107410791085108610903349 
DOI: 10.1002/nt.2620010606
Park, J-W., Kim, S. H., Ito, T.,Fujii, T., Kim, S. Y., Laurell, T., Lee, S. W., Goda, K. 2016 Acoustofluidic harvesting of microalgae on a single chip. Biomicrofluidics, 10, 034119 (article ID).
Strain(s): 48 
PubMed: 27462380
DOI: 10.1063/1.4954744
Park, M.-H., Kim, B.-H., Chung, I. M., Hwang, S.-J. 2009 Selective bactericidal potential of rice (Oryza sativa L. var. japonica) full extract on Microcystis strain in comparison with green algae and zooplankton. Bull. Environ. Contam. Toxicol., 83, 97-101.
Keywords: Rice hull extract; Selective control; Microcystis aeruginosa; Green alga; Zooplankton
Strain(s): 298 
PubMed: 19434356
DOI: 10.1007/s00128-009-9732-6
Partensky, F., Hoepffner, N., Li, W. K. W., Ulloa, O., Vaulot, D. 1993 Photoacclimation of Prochlorococcus sp. (Prochlorophyta) strains isolated from the North Atlantic and the Mediterranean Sea. Plant Physiol., 101, 285-296.
Strain(s): 28802881 
PubMed: 12231684
DOI: 10.1104/pp.101.1.285
Partensky, F., Six, C., Ratin, M., Garczarek, L., Vaulot, D., Probert, I., Calteau, A., Gourvil, P., Marie, D., Grébert, T., Bouchier, C., Le Panse, S., Gachenot, M., Rodríguez, F., Garrido, J. L. 2018 A novel species of the marine cyanobacterium Acaryochloris with a unique pigment content and lifestyle. Sci Rep, 8, 9142 (article ID).
Strain(s): 3840 
PubMed: 29904088
DOI: 10.1038/s41598-018-27542-7
Pascual, G., Sano, D., Sakamaki, T., Nishimura, O. 2020 Effects of chemical interaction of nutrients and EDTA on metals toxicity to Pseudokirckneriella subcapitata. Ecotox. Environ. Safe., 203, 110966 (article ID).
Keywords: Metal toxicity; Nutrient metal; Non-nutrient metal; EDTA; Metal speciation
Strain(s): 35 
PubMed: 32678755
DOI: 10.1016/j.ecoenv.2020.110966
Patel, A. K., Singhania, R. R., Sim, S. J., Dong, C. D. 2021 Recent advancements in mixotrophic bioprocessing for production of high value microalgal products. Bioresour. Technol., 320, 124421 (article ID).
Keywords: Microalgae; Mixotrophic; MCS; Organic carbon; Photosynthesis; Bioproducts
Strain(s): 144 
PubMed: 33246239
DOI: 10.1016/j.biortech.2020.124421
Patel, A., Chaudhary, S., Alam Syed, B., Gami, B., Patel, P. 2018 Rbcl marker based approach for molecular identification of Arthrospira and Dunaliella isolates from non-axenic cultures. J. Genet. Genetic Engine, 2, 24-34.
Keywords: Arthrospira; Dunaliella; Microalgae; Molecular identification; non-axenic culture; rbcL gene marker
Strain(s): 637 
Pedersén, M., DaSilva, E. J. 1973 Simple brominated phenols in the bluegreen alga Calothrix brevissima West. Planta, 115, 83-86.
Strain(s): 22 
PubMed: 24458820
DOI: 10.1007/BF00388608
Pelusi, A., Hanawa, Y., Araie, H., Suzuki, I., Giordan, M., Shiraiwa, Y. 2016 Rapid detection and quantification of haptophyte alkenones by Fourier transform infrared spectroscopy (FTIR). Algal Res., 19, 48-56.
Keywords: Alkenones; Alkenone-producing haptophyte; Emiliania huxleyi; FTIR; Lipid;trans-Carbon-carbon double bond
Strain(s): 837 
DOI: 10.1016/j.algal.2016.07.006
Peng, G., Martin, R.M., Dearth, S.P., Sun, X., Boyer, G.L., Campagna, S.R., Lin, S., Wilhelm, S.W. 2018 Seasonally relevant cool temperatures interact with N chemistry to increase microcystins produced in lab cultures of Microcystis aeruginosa NIES-843. Environ. Sci. Technol., 52, 4127-4136.
Strain(s): 843 
PubMed: 29522323
DOI: 10.1021/acs.est.7b06532
Peng, H., Wei, D., Chen, G., Chen, F. 2016 Transcriptome analysis reveals global regulation in response to CO2 supplementation in oleaginous microalga Coccomyxa subellipsoidea C-169. Biotechnol. Biofuels, 9, 151 (article ID).
Keywords: Coccomyxa subellipsoidea C-169; Elevated CO2; Lipid accumulation; Transcriptomic analysis; Phosphoenolpyruvate carboxylase; Pyruvate carboxylase; Carbamoyl-phosphate synthetase II; Ferredoxin; Vacuolar; H+-ATPase
Strain(s): 2166 
PubMed: 27453726
DOI: 10.1186/s13068-016-0571-5
Pengfei, J., Wang, H., Huang, W., Liu, W., Fan, Y., Miao, W. 2018 The allelopathic effect and safety evaluation of 3,4-Dihydroxybenzalacetone on Microcystis aeruginosa. Pest. Biochem. Physiol., 147, 145-152.
Keywords: Antibacterial; DBL; Phenolic acids; Microcystis aeruginosa; Environmental friendly
Strain(s): 843 
PubMed: 29933985
DOI: 10.1016/j.pestbp.2017.08.011
Petersen, J., Ludewig, A. K., Michael, V., Bunk, B., Jarek, M., Baurain, D., Brinkmann, H. 2014 Chromera velia, endosymbioses and the rhodoplex hypothesis--plastid evolution in cryptophytes, alveolates, stramenopiles, and haptophytes (CASH lineages). Genome Biol. Evol., 6, 666-684.
Keywords: next-generation sequencing; eukaryote-to-eukaryote endosymbioses; horizontal and endosymbiotic gene transfer; chromalveolate hypothesis; long-branch attraction artifacts
Strain(s): 4391 
PubMed: 24572015
DOI: 10.1093/gbe/evu043
Pfaff, S., Borchhardt, N., Boy, J., Karsten, Ulf., Gustavs, L. 2016 Desiccation tolerance and growth-temperature requirements of Coccomyxa (Trebouxiophyceae, Chlorophyta) strains from Antarctic biological soil crusts. Algol. Stud., 151/152, 3-19.
Keywords: Antarctica; biological soil crusts; ecophysiology; desiccation; cold adaptation; endemis
Strain(s): 2166 
DOI: 10.1127/algol_stud/2016/0245
Pham, T., Shimizu, K., Dao, T., Hong-Do, L., Utsumi, M. 2015 Microcystin uptake and biochemical responses in the freshwater clam Corbicula leana P. exposed to toxic and non-toxic Microcystis aeruginosa: Evidence of tolerance to cyanotoxins. Toxicology Report, 2, 88-98.
Keywords: Bioaccumulation; Biochemical response; Corbicula leana; Microcystins; Toxic and non-toxic
Strain(s): 10110862170 
DOI: 10.1016/j.toxrep.2015.01.012
Pham, T.-L., Bui, M. H., Driscoll, M., Shimizu, K., Motoo, U. 2020 First report of geosmin and 2-methylisoborneol (2-MIB) in Dolichospermum and Oscillatoria from Vietnam. Limnology, 22, 43–56.
Keywords: Off-flavour compounds; Taste and odour; Tropical water; Cyanobacteria
Strain(s): 19338181416481879 
DOI: 10.1007/s10201-020-00630-2
Pham, T.-L., Tran, T. H. Y., Hoang, N. S., Ngo, X. Q., Tran, T. T. 2020 Co-occurrence of microcystin-and geosminproducing cyanobacteria in the Tri An Reservoir, a drinking-water supply in Vietnam. Fundam. Appl. Limnol., 193, 299-311.
Keywords: taste and odor; off-flavor compound; earthy/muddy smell; cyanotoxin
Strain(s): 102 
DOI: 10.1127/fal/2020/1296
Phan,C.-S., Matsuda, K., Balloo, N., Fujita, K., Wakimoto, T., Okino, T. 2021 Argicyclamides A–C Unveil Enzymatic Basis for Guanidine Bis-prenylation J. Am. Chem. Soc., ,
Strain(s): 88 
PubMed: 34181406
DOI: 10.1021/jacs.1c05732
Piligaeva, A.V., Sorokinaab, K.N., Shashkovab, M.V., Parmon, V.N. 2018 Screening and comparative metabolic profiling of high lipid content microalgae strains for application in wastewater treatment. Bioresour. Technol., 250, 538-547.
Keywords: Microalgae; Wastewater; Metabolic profiling; Lipid metabolism
Strain(s): 21642280 
PubMed: 29197777
DOI: 10.1016/j.biortech.2017.11.063
Pisapia, F., Holland, W. C., Hardison, D. R., e Litake, R. W., Fraga, S., Nishimura, T., Adachi, M., Nguyen-Ngoc, L., Séchet, V., Amzil, Z., Herrenknecht, C., Hess, P. 2017 Toxicity screening of 13 Gambierdiscus strains using neuro-2a and erythrocyte lysis bioassays. Harmful Algae, 63, 173-183.
Keywords: Ciguatera fish poisoning; Gambierdiscus; Ciguatoxins; Maitotoxins; Neuro-2a assay; Erythrocyte lysis assay
Strain(s): 4118 
PubMed: 28366392
DOI: 10.1016/j.hal.2017.02.005
Pisapia, F., Sibat, .M., Herrenknecht, C., Lhaut, K., Gaiani, G., Ferron, P., Fessard, V., Fraga, S., Nascimento, S. M., Litaker, R. W., Holland, W. C., Roullier, C., Hess, P. 2017 Maitotoxin-4, a novel MTX analog produced by Gambierdiscus excentricus. Mar. Drugs, 15, 220 (article ID).
Keywords: Gambierdiscus excentricus; maitotoxin-4; bioguided fractionation; size-exclusion chromatography (LH-20); neuro-2a (N2a) assay; LC-HRMS/MS (Q-Tof 6550); LC-LRMS/MS (API4000 QTrap)
Strain(s): 41184119 
PubMed: 28696398
DOI: 10.3390/md15070220
Pjon, C.-J., Fujita, Y. 1973 Immunological identification of pigment component of a photochemically active chromoprotein (ACP) isolated from the blue-green alga Anabaena cylindrica. Plant Cell Physiol., 14, 201-205.
Strain(s): 19 
Pjon, C.-J., Fujita, Y. 1974 The separation and characterization of the photoreactive component of a photochemically active chromoprotein (ACP) obtained from the blue-green alga Anabaena cylindrica. Plant Cell Physiol., 15, 789-797.
Strain(s): 19 
Pjon, C.-J., Suzuki, R., Fujita, Y. 1972 Photochemical activity fluorescence and absorption spectrum of the photochemically active chromoprotein (ACP) isolated from the blue-green alga Anabaena cylindrica. Plant Cell Physiol., 13, 437-447.
Strain(s): 19 
Poli, M., Ruiz-Olvera, P., Nalca, A., Ruiz, S., Livingston, V., Frick, O., Dyer, D., Schellhase C., Raymond, J., Kulis, D., Anderson, D., McGrath, S., Deeds, J. 2018 Toxicity and pathophysiology of palytoxin congeners after intraperitoneal and aerosol administration in rats. Toxicon, 150, 235-250.
Keywords: Palytoxin congeners; Intraperitoneal administration; Aerosol administration; Lethality; Tissue histopathology; Rats
Strain(s): 3351 
PubMed: 29902540
DOI: 10.1016/j.toxicon.2018.06.067
Pollner, E., Farré, E. M., Bennlng, C. 2018 Advanced genetic tools enable synthetic biology in the oleaginous microalgae Nannochloropsis sp. Plant Cell Reports, 37, 1383-1399.
Keywords: Nannochloropsis; Algal biotechnology; Marker-free engineering; Gene stacking; Synthetic biology; Episomes
Strain(s): 21452146 
PubMed: 29511798
DOI: 10.1007/s00299-018-2270-0
Pombert, J. F., Beauchamp, P., Otis, C., Lemieux, C., Turmel, M. 2006a The complete mitochondrial DNA sequence of the green alga Oltmannsiellopsis viridis: evolutionary trends of the mitochondrial genome in the Ulvophyceae. Curr. Genet., 50, 137-147.
Keywords: green algae; mitochondrial genome evolution; horizontal DNA transfers; introns; repeated sequences
Strain(s): 360 
PubMed: 16721603
DOI: 10.1007/s00294-006-0076-z
Pombert, J.-F., Lemieux, C., Turmel, M 2006b The complete chloroplast DNA sequence of the green alga Oltmannsiellopsis viridis reveals a distinctive quadripartite architecture in the chloroplast genome of early diverging ulvophytes. BMC Biol., 4, 3 (article ID).
Strain(s): 360 
PubMed: 16472375
DOI: 10.1186/1741-7007-4-3
Poonkum, W., Powtongsook, S., Pavasant, P. 2015 Astaxanthin induction in microalga H. pluvialis with flat panel airlift photobioreactors under indoor and outdoor conditions. Prep. Biochem. Biotechnol., 45, 1-17.
Keywords: carotenoid; Haematococcus pluvialis; mature cyst; microalgae; pigment; scale-up
Strain(s): 144 
PubMed: 25105532
DOI: 10.1080/10826068.2013.867871
Popin, R. V., Delbaje, E., Abreu, V.A.C., Rigonato, J., Dörr, F.A., Pinto, E., Sivonen, K., Fiore, M.F. 2020 Genomic and metabolomic analyses of natural products in Nodularia spumigena isolated from a shrimp culture pond. Toxins, 12, 141 (article ID).
Keywords: cyanobacteria; gene cluster; mass spectrometry; cyanotoxins; terpenes; water quality
Strain(s): 3585 
PubMed: 32106513
DOI: 10.3390/toxins12030141
Pound, H. L., Wilhelm, S. W. 2020 Tracing the active genetic diversity of Microcystis and Microcystis phage through a temporal survey of Taihu. PLoS One, 15, e0244482 (article ID).
Strain(s): 88843 
PubMed: 33370358
DOI: 10.1371/journal.pone.0244482
Pratte, B. S., Thiel, T. 2021 Comparative genomic insights into culturable symbiotic cyanobacteria from the water fern Azolla. Microb. Genomics, ,
Strain(s): 253275 
PubMed: 34181515
DOI: 10.1099/mgen.0.000595
Praveenkumar, R., Lee, J., Vijaya, D., Lee, S. Y., Lee, K., Sim, S. J., Hong, M. E., Kim, Y.-E., Oh, Y.-K. 2020 Morphological change and cell disruption of Haematococcus pluvialis cyst during high-pressure homogenization for astaxanthin recovery. Appl. Sci., 10, 513 (article ID).
Keywords: Haematococcus pluvialis; high-pressure homogenization; astaxanthin; cyst; cell disruption
Strain(s): 144 
DOI: 10.3390/app10020513
Pröschold, T., Darienko, T. 2018 The distinctions between Chlamydomonas incerta Pascher and Chlamydomonas globosa J.W. Snow and their taxonomic consequences. Notulae Algarum, 56 1-4.
Strain(s): 2462 
Pröschold, T., Darienko, T., Krienitz, L., Coleman, A. W. 2018 Chlamydomonas schloesseri sp. nov. (Chlamydophyceae, Chlorophyta) revealed by morphology, autolysin cross experiments, and multiple gene analyses. Phytotaxa, 362, 21-38.
Keywords: integrative taxonomy; Chlamydomonas; intraspecific variation; species concept; DNA barcoding
Strain(s): 2462 
DOI: 10.11646/phytotaxa.362.1.2
Pröschold, T., Harris, E. H., Coleman, A. W. 2005 Portrait of a species: Chlamydomonas reinhardtii. Genetics, 170, 1601-1610.
Keywords: Chlamydomonas; Internal Transcribed Spacer; phylogenetics; population genetics; ribosomal cistrons
Strain(s): 22372238 
PubMed: 15956662
DOI: 10.1534/genetics.105.044503
Pröschold, T., Pitsch, G., Darienko, T. 2020 Micractinium tetrahymenae (Trebouxiophyceae, Chlorophyta), a new endosymbiont isolated from ciliates. Diversity-Basel, 12, 200 (article ID).
Keywords: Micractinium tetrahymenae; Tetrahymena; Utricularia; facultative endosymbiosis; ciliate-algae symbiosis
Strain(s): 216721714033 
DOI: 10.3390/d12050200
Price, D. C., Steiner, J. M., Yoon, H. S., Bhattacharya, D., Löffelhardt, W. 2017 Glaucophyta In Handbook of the protists, 2nd ed. , Eds. by Archibald, J. M., Simpson, A. G. B., Slamovits, C. H., Springer, pp. 1-65.
Keywords: Archaeplastida; Cyanophora paradoxa; Muroplasts; Single primary endosymbiotic event; Phylogenomics; Carbon-concentrating mechanism; Eukaryotic peptidoglycan; Phycobilisomes
Strain(s): 5477637649661369196121413645 
DOI: 10.1007/978-3-319-32669-6_42-1

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