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Ha, J. H., Hidaka, T., Tsuno, H.
2009
Quantification of toxic Microcystis and evolution of its dominance ratio in blooms using real-time PCR.
Environ. Sci. Technol.,
43,
812-818.
Strain(s): 102 PubMed: 19245020 DOI: 10.1021/es801265f |
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Ha, K., Takamura, N., Jang, M.-H.
2009
Microcystin production by Microcystis aeruginosa exposed to phytoplanktivorous and omnivorous fish at different kairomone concentrations.
Bull. Environ. Contam. Toxicol.,
83,
761-765.
Keywords: microcystin; kairomone; Hypophthalmichthys molitrix; Carassius gibelio langsdorfi Strain(s): 89, 103, 107 PubMed: 19669611 DOI: 10.1007/s00128-009-9841-2 |
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Hagino, K., Bendif, E. M., Young, J. R. Kogame, K., Probert, I., Takano, Y., Horiguchi, T., de Vardas, C., Okada, H.
2011
New evidence for morphological and genetic variation in the cosmopolitan coccolithophore Emiliania huxleyi (Prymnesiophyceae) from the COX1b-ATP4 genes.
J. Phycol.,
47,
1164-1176.
Keywords: biogeography; coccolithophore; Emiliania huxleyi; mitochondrial DNA; morphotype Strain(s): 837, 838, 1000, 1311, 1312, 1313, 1314 DOI: 10.1111/j.1529-8817.2011.01053.x |
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Hagiwara, T., Yagi, O., Takamura, Y., Sudo, R.
1984
Isolation of bacteria-free Microcystis aeruginosa from Lake Kasumigaura.
Jpn. J. Water Poll. Res.,
7,
437-442 (in Japanese with English summary).
Strain(s): 604 |
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Hamada, M., Schröder, K., Bathia, J., Kürn, U., Fraune, S., Khalturina, M., Khalturin, K., Shinzato, C., Satoh, N., Bosch, T. C.G.
2018
Metabolic co-dependence drives the evolutionary ancient Hydra-Chlorella symbiosis.
eLife,
7,
e35122 (article ID).
Keywords: Chlorella; Hydra; evolutionary biology; genome; nitrogen metabolism; symbiosis Strain(s): 2166, 2235, 2541 PubMed: 29848439 DOI: 10.7554/eLife.35122 |
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Hamada, S., Sekimoto, H., Tanabe, Y., Tsuchikane, Y., Ito, M.
2006
Isolation of myosin XI genes from the Closterium peracerosum-strigosum-littorale complex and analysis of their expression during sexual reproduction.
J. Plant Res.,
119,
105-113.
Keywords: Closterium; Cytokinesis; Myosin XI; Real-time PCR; Sexual cell division; Sexual reproduction Strain(s): 65, 67, 68 PubMed: 16456621 DOI: 10.1007/s10265-005-0249-8 |
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Hamaji, T., Ferris, J. P., Nishii, I., Nishimura, Y., Nozaki, H.
2013
Distribution of the sex-determining geneMID and molecular correspondence of mating types within the isogamous genus Gonium (Volvocales, Chlorophyta).
PLoS One,
8,
e64385 (article ID).
Strain(s): 652, 653, 654, 655, 851, 852, 1038, 1039, 1708, 1710, 1711, 2455, 2457 PubMed: 23696888 DOI: 10.1371/journal.pone.0064385 |
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Hamaji, T., Ferris, P. J., Coleman, A.W., Waffenschmidt, S., Takahashi, F., Nishii, I., Nozaki, H.
2008
Identification of the minus-dominance gene ortholog in the mating-type locus of Gonium pectorale.
Genetics,
178,
283-294.
Strain(s): 1710, 1711 PubMed: 18202374 DOI: 10.1534/genetics.107.078618 |
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Hamaji, T., Kawai-Toyooka, H., Toyoda, A., Minakuchi, Y., Suzuki, M., Fujiyama, A., Nozaki, H., Smith, D. R.
2017
Multiple independent changes in mitochondrial genome conformation in chlamydomonadalean algae.
Genome Biol. Evol.,
9,
993-999.
Keywords: Eudorina; linear mitochondrial DNA; telomere; Volvox; Yamagishiella Strain(s): 3982, 3984 PubMed: 31972029 DOI: 10.1093/gbe/evx060 |
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Hamaji, T., Kawai-Toyooka, H., Uchimura, H., Suzuki, M., Noguchi, H., Minakuchi, Y., Toyoda, A., Fujiyama, A., Miyagishima, S., Umen, J. G., Nozaki, H.
2018
Anisogamy evolved with a reduced sexdetermining region in volvocine green algae.
Communications Biology,
1,
17 (article ID).
Strain(s): 3982, 3983, 3984, 3985, 4018, 4100 DOI: 10.1038/s42003-018-0019-5 |
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Hamaji, T., Mogi, Y., Ferris, P. J., Mori, T., Miyagishima, S., Kabeya, Y., Nishimura, Y., Toyoda, A., Noguchi, H., Fujiyama, A., Olson, B. J. S. C., Marriage, T. N., Nishii, I., Umen, J. G. Nozaki, H.
2016
Sequence of the Gonium pectorale mating locus reveals a complex and dynamic history of changes in volvocine algal mating haplotypes.
G3-Genes Genomes Genet.,
6,
1179-1189.
Keywords: Gonium; Chlamydomonas; Volvox; mating locus; evolution; Genetics of Sex Strain(s): 2863 PubMed: 26921294 DOI: 10.1534/g3.115.026229 |
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Hamaji, T., Smith, DR., Noguchi, H., Toyoda, A., Suzuki, M., Kawai-Toyooka, H., Fujiyama, A., Nishii, I., Marriage, T., Olson, B. J. S. C., Nozaki, H.
2013
Mitochondrial and plastid genomes of the colonial green alga Gonium pectorale give insights into the origins of organelle DNA architecture within the Volvocales.
PLoS One,
8,
e57177 (article ID).
Strain(s): 2863 PubMed: 23468928 DOI: 10.1371/journal.pone.0057177 |
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Hamamoto, Y. & Honda, D.
2019
Nutritional intake of Aplanochytrium (Labyrinthulea, Stramenopiles) from living diatoms revealed by culture experiments suggesting the new prey–predator interactions in the grazing food web of the marine ecosystem.
PLoS One,
14,
e0208941 (article ID).
Strain(s): 324, 3712 PubMed: 30625142 DOI: 10.1371/journal.pone.0208941 |
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Hamana, K.
2008
Cellular polyamines of phototrophs and beterotrophs belonging to the lower eukaryotic phyla Cercozoa, Euglenozoa, Heterokonta and Metamonada.
J. Gen. Appl. Microbiol.,
54,
135-140.
Keywords: cyanobacteria; homospermidine; polyamine; spermine; thermospermine Strain(s): 9, 15, 71, 86, 118, 253, 323, 330, 333, 548, 603, 622, 1002, 1003, 1011, 1044, 1303, 1380, 1440, 1443, 1444 PubMed: 18497488 DOI: 10.2323/jgam.54.135 |
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Hamana, K. & Niitsu, M.
2006
Cellular polyamines of lower eukaryotes belonging to the phyla Glaucophyta, Rhodophyta, Cryptophyta, Haptophyta and Percolozoa.
J. Gen. Appl. Microbiol.,
52,
235-240.
Keywords: Cryptophyta; Glaucophyta; Haptophyta; Perclozoa; polyamine; Rhodophyta Strain(s): 8, 274, 276, 277, 282, 353, 388, 699, 706, 715, 741, 763, 764, 1016, 1017, 1032, 1036, 1332, 1441, 1456, 1457, 1462, 1463, 1467, 1473, 3377 PubMed: 17116972 DOI: 10.2323/jgam.52.235 |
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Hamana, K., Aizaki T., Arai, E., Saito, A., Uchikata, K., Ohnishi, H.
2004
Distribution of norspermidine s a cellular polyamine within micro green algae including non-photosynthetic achlorophyllous Polytoma, Polytomella, Prototheca and Helicosporidium.
J. Gen. Appl. Microbiol.,
50,
289-295.
Keywords: Chlorophyta; green alga; Helicosporidium; norspermidine; polyamine; Polytoma; Polytomella; Prototheca Strain(s): 18, 251, 254, 255, 296, 329, 483, 486, 536 |
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Hamana, K., Furuchi, T., Hayashi, H., Niitsu, M.
2016
Additional analysis of cyanobacterial polyamines ─ Distributions of spermidine, homospermidine, spermine, and thermospermine within the phylum Cyanobacteria. ─
Microb. Resour. Syst.,
32,
179-186.
Keywords: cyanobacteria; homospermidine; polyamine; thermospermine Strain(s): 2086, 2087, 2134, 2412, 2539, 3373 |
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Hamana, K., Furuchi, T., Hayashi, H., Niitsu, M.
2022
Additional polyamine analysis of algal chlorarachniophytes, euglenophytes, haptophytes, cryptophytes, dinoflagellates, chromerids and heterokontophytes. —Polyamine analysis of algae IV—
Microb. Resour. Syst.,
38,
51-62.
Keywords: alga; chlorarachniophyte; chromerid; dinoflagellate; polyamine Strain(s): 12, 47, 48, 253, 274, 276, 277, 282, 286, 304, 331, 381, 387, 463, 623, 624, 699, 706, 715, 741, 1443, 2145, 2146, 2149, 2351, 2433, 2535, 2584, 2588, 2635, 2677, 2716, 2728, 2860, 3576, 3745, 4060, 4109, 4280, 4391, 4392 |
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Hamana, K., Furuchi, T., Hayashi, H., Uemura, T., Niitsu, M.
2023
Additional polyamine analysis of the algae belonging to the phyla Glaucophyta, Rhodophyta and Chlorophyta. ─Polyamine analysis of algae V─
Microb. Resour. Syst.,
39,
33-40.
Keywords: alga; Chlorophyta; Glaucophyta; polyamine; Rhodophyta Strain(s): 226, 250, 254, 550, 551, 626, 1298, 1332, 1703, 1836, 2137, 2163, 2164, 2165, 2166, 2252, 2353, 2894, 3377, 3645, 3867, 3891, 3892, 4107, 4390, 4452 |
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Hamana, K., Furuchi, T., Nakamura, T., Hayashi, H., Niitsu, M.
2017
Occurrence of penta-amines, hexa-amines and N-methylated polyamines in unicellular eukaryotic organisms belonging to the phyla Heterokontophyta and Labyrinthulomycota of the subdomain Stramenopiles.
J. Gen. Appl. Microbiol.,
62,
320-325.
Keywords: Bioaccumulation; clam Corbicula leana; cyanotoxins; elimination; Microcystis Strain(s): 2535 PubMed: 27773915 DOI: 10.2323/jgam.2016.05.001 |
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Hamana, K., Kobayashi, M., Furuchi, T., Hayashi, H., Niitsu, M.
2018
Polyamine analysis of unicellular, colonial, and multicellular green algae —Detection of aminobutylcadaverine, N1-aminopentylspermidine, N8-aminopentylspermidine, and penta-amines.—
Microb. Resour. Syst.,
34,
73-82.
Keywords: aminobutylcadaverine; aminopentylspermidine; green alga; penta-amine; polyamine; thermospermine Strain(s): 18, 35, 242, 691, 735, 1271, 1278, 2185, 2187, 2235, 2261, 2540, 2572, 3983 |
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Hamana, K., Kobayashi, M., Furuchi, T., Hayashi, H., Niitsu, M.
2018
Polyamine distribution profiles in unicellular and multicellular red algae (phylum Rhodophyta) —Detection of 1,6-diaminohexane, aminobutylcadaverine, canavalmine and aminopropylcanavalmine.—
Microb. Resour. Syst.,
34,
83-91.
Keywords: aminobutylcadaverine; aminopropylcanavalmine; canavalmine; diaminohexane; polyamine; red algae; Rhodophyta Strain(s): 551, 1032, 1572, 1957, 2138, 2140, 2636, 2662, 2742 |
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Hamana, K., Kobayashi, M., Yokota, A., Sekiguchi, H., Niitsu, M.
2008
Cellular polyamine profiles in cyanobacteria.
Microbiol. Cult. Coll.,
24,
3-8.
Keywords: cyanobacteria; homospermidine; polyamine; spermine; thermospermine Strain(s): 26, 33, 36, 46, 206, 208, 230, 267, 268, 305, 361, 416, 433, 434, 481, 507, 597, 598, 931, 932, 1031, 2115, 2133, 2135 |
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Hamana, K., Matsuzaki, S., Niitsu, M., Samejima, K., Nagashima, H.
1990
Polyamines of unicellular thermoacidophilic red alga Cyanidium caldarium.
Phytochemistry,
29,
377-380.
Keywords: Cyanidium caldarium; Rhodophyta; red algae; polyamines; chemotaxonomy Strain(s): 250, 2137, 3891 DOI: 10.1016/0031-9422(90)85082-Q |
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Hamana, K., Miyagawa, K., Matsuzaki, S.
1983
Occurrence of syn-homospermidine as the major polyamine in nitrogen-fixing cyanobacteria.
Biochem. Biophys. Res. Commun.,
112,
606-613.
Strain(s): 19, 37, 39, 2129, 3275 PubMed: 6405746 DOI: 10.1016/0006-291X(83)91507-3 |
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Hamana, K., Niitsu, M., Hayashi, H.
2013
Occurrence of homospermidine and thermospermine as a cellular polyamine in unicellular chlorophyte and multicellular charophyte green algae
J. Gen. Appl. Micobiol.,
59,
313-319.
Keywords: green alga; homospermidine; polyamine; thermospermine Strain(s): 18, 151, 160, 255, 296, 306, 360, 363, 640, 722, 836, 1409, 1410, 1411, 1419, 1837, 2164, 2199, 3374 PubMed: 24005181 DOI: 10.2323/jgam.59.313 |
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Hamana, K., Sakamoto, A., Nishina, M., Niitsu, M.
2004
Cellular polyamine profile of the phyla Dinophyta, Apicomplexa, Ciliophora, Euglenozoa, Cercozoa and Heterokonta.
J. Gen. Appl. Microbiol.,
50,
297-303.
Keywords: Apicomlexa; Cercozoa; Ciliophora; Dinophyta; Euglenozoa; Heterokonta; norspermidine; polyamine Strain(s): 12, 286, 304, 331, 381, 387, 463 PubMed: 15747233 DOI: 10.2323/jgam.50.297 |
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Hamano, R., Shoumura, S., Takeda, Y., Yamazaki, T., Hirayama, K., Hanada, Y., Mayama, S., Takemura, M., Lin, H.-J., Umemura, K.
2021
Sinking of four species of living diatom cells directly observed by a “tumbled” optical microscope.
Microsc. microanal.,
27,
1154-1160.
Strain(s): 589 PubMed: 34294188 DOI: 10.1017/S1431927621012150 |
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Han, J.-I., Yao, J., Lee, C., Park, J., Choi, Y.-E.
2019
A novel approach to enhance astaxanthin production in Haematococcus lacustris using a microstructure-based culture platform.
Algal Res.,
39,
101464.
Keywords: Haematococcus lacustris; Microfabricated structure; Astaxanthin; ROS; Mechanical stimulation Strain(s): 144 DOI: 10.1016/j.algal.2019.101464 |
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Han, S.-I., Chang, S. H., Lee, C., Jeon, M. S., Heo, Y. M., Kim, S.
2020
Astaxanthin biosynthesis promotion with pH shock in the green microalga, Haematococcus lacustris.
Bioresour. Technol.,
314,
123725 (article ID).
Keywords: Haematococcus lacustris; Astaxanthin; pH shock; Biological change; Mass culture Strain(s): 144 PubMed: 32615445 DOI: 10.1016/j.biortech.2020.123725 |
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Han, S.-I., Jeon, M. S., Ahn, J.-W., Choi, Y.-E.
2022
Establishment of ultrasonic stimulation to enhance growth of Haematococcus lacustris.
Bioresour. Technol.,
360,
127525 (article ID).
Keywords: Haematococcus lacustris; Astaxanthin; Ultrasonication; Cell division Strain(s): 144 PubMed: 35760247 DOI: 10.1016/j.biortech.2022.127525 |
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Hanagata, N., Karube, I., Chihara, M., Silva, P. C.
1998
Reconsideration of the taxonomy of ellipsoidal species of Chlorella (Trebouxiophyceae, Chlorophyta), with establishment of Watanabea gen. nov.
Phycol. Res.,
46,
221-229.
Keywords: Chlorella saccharophila; ellipsoidal species of Chlorella; pyrenoid-lacking Chlorella-like algae: Watanabea gen. et sp. nov. Strain(s): 2189 DOI: 10.1111/j.1440-1835.1998.tb00117.x |
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Hanazato, T.
1991
Interrelations between Microcystis and Cladocera in the highly eutrophic Lake Kasumigaura, Japan.
Int. Revue ges. Hydrobiol.,
76,
21-36.
Keywords: Microcystis; Cladocera; toxicity; food chain; Lake Kasumigaura Strain(s): 44, 298, 299 DOI: 10.1002/iroh.19910760104 |
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Handa, S., Nakahara, M., Tsubota, H., Deguchi, H., Nakano, T.
2003
A new aerial alga, Stichococcus ampulliformis sp. nov. (Trebouxiophyceae, Chlorophyta) from Japan.
Phycol. Res.,
51,
203-210.
Keywords: aerial algae; molecular phylogeny; Stichococcus ampulliformis sp. nov.; Trebouxiophyceae; 18SrRNA gene Strain(s): 996 DOI: 10.1046/j.1440-1835.2003.00311.x |
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Handa, S., Nakahara-Tsubota, M., Shoda, I., Mizobuchi, A., Nakano, T., Tsubota, H.
2023
Trentepohlia brevicellulis comb. et stat. nov. (Trentepohliaceae, Ulvophyceae) found in Japan.
Phycol. Res.,
72,
12-26.
Keywords: 18S rDNA; aerial algae; molecular phylogeny; morphology; Trentepohlia bosseae var. brevicellulis Strain(s): 2644, 2645, 2646, 2647, 2649, 2650, 2651, 2652, 2653, 2654, 2655, 2656, 2657, 2658 DOI: 10.1111/pre.12537 |
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Hang, L. T., Mori, K., Tanaka, Y., Morikawa, M., Toyama, T.
2020
Enhanced lipid productivity of Chlamydomonas reinhardtii with combination of NaCl and CaCl2 stresses.
Bioprocess. Biosyst. Eng.,
43,
971–980.
Keywords: Chlamydomonas reinhardtii; NaCl; CaCl2; Lipid accumulation; Biofuel production Strain(s): 2235 PubMed: 32008095 DOI: 10.1007/s00449-020-02293-w |
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Hang, L. T., Mori, K., Toyama, T.
2020
Enhanced biomass and lipid production capacity of Chlamydomonas reinhardtii under mixotrophic cultivation using sewage effluent and waste molasses.
Jpn. J. Water Treat. Biol.,
56,
57-66.
Keywords: Chlamydomonas reinhardtii; lipid production; mixotrophy; sewage effluent; organic waste Strain(s): 2235 DOI: 10.2521/jswtb.56.57 |
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Hano, T. & Tomaru, Y.
2019
Metabolomics-based approach to explore growth phase-dependent markers in cultured diatom Chaetoceros tenuissimus.
J. Chromatogr. B,
1128,
121779 (article ID).
Keywords: Diatom; Metabolomics; Gas chromatography mass spectrometry; Liquid chromatography tandem mass spectrometry; Growth phase Strain(s): 3715 PubMed: 31499295 DOI: 10.1016/j.jchromb.2019.121779 |
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Hano, T. & Tomaru, Y.
2023
Chronological age-related metabolome responses in the dinoflagellate Karenia mikimotoi, can predict future bloom demise.
Commun. Biol.,
6,
273 (article ID).
Strain(s): 3715 PubMed: 36922623 DOI: 10.1038/s42003-023-04646-z |
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Hanschen, E. R., Davison, D. R., Ferris, P. J., Michod, R. E.
2018
On the rediscovery of Volvox perglobator (Volvocales, Chlorophyceae) and the evolution of outcrossing from self-fertilization.
Evol. Ecol. Res.,
19,
299-318.
Keywords: homothallism; phylogenetics; reversion; self-fertilization; sexual reproduction; volvocine green algae Strain(s): 289, 421, 456, 458, 460, 474, 522, 541, 543, 544, 545, 564, 566, 568, 569, 571, 572, 574, 578, 582, 653, 732, 751, 851, 856, 872, 876, 877, 878, 880, 882, 1038, 1122, 1140, 1148, 1156, 1157, 1362, 1708, 1711, 1713, 1859, 2457, 2569, 2738, 3382, 3388, 3780, 3782, 3986, 4145, 4258, 4259, 4260 |
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Hanschen, E. R., Ferris, P. J., Michod, R. E.
2014
Early evolution of the genetic basis for soma in the Volvocaceae.
Evolution,
68,
2014-2025.
Keywords: Gene duplication; germ-soma differentiation; major transitions; multicellularity; regA; Volvox Strain(s): 2739 PubMed: 4689915 DOI: 10.1111/evo.12416 |
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Hanschen, E. R., Herron, M. D., Wiens, J. J., Nozaki, H., Michod, R. E.
2018
Multicellularity drives the evolution of sexual traits.
Am. Nat.,
192,
E93-E10.
Keywords: sex; volvocine green algae; multicellularity; ancestral state; reconstruction; anisogamy; sexual dimorphism Strain(s): 289, 418, 421, 456, 458, 460, 522, 541, 543, 544, 545, 564, 566, 568, 569, 571, 572, 574, 578, 582, 653, 732, 751, 851, 856, 857, 872, 875, 876, 877, 878, 880, 882, 883, 891, 892, 1038, 1362, 1711, 1713, 2457, 2569, 2738, 3382, 3388, 3780, 3782 PubMed: 30125231 DOI: 10.1086/698301 |
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Hanschen, E. R., Herron, M. D., Wiens, J. J., Nozaki, H., Michod, R. E.
2018
Repeated evolution and reversibilityof self-fertilization in the volvocinegreen algae.
Evolution,
72,
386-398.
Keywords: Haploid; phylogenetics; self-fertilization; sex; sexual reproduction; volvocine green algae Strain(s): 289, 418, 456, 458, 460, 541, 543, 544, 545, 564, 566, 568, 569, 571, 572, 574, 578, 582, 653, 732, 851, 856, 857, 872, 875, 876, 877, 878, 880, 882, 883, 891, 892, 1038, 1362, 1711, 1713, 2457, 2569, 2738, 3382, 3388, 3780, 3782 PubMed: 29134623 DOI: 10.1111/evo.13394 |
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Hanschen, E. R., Marriage, T.N., Ferris, P.J., Hamaji, T., Toyoda, A., Fujiyama,A., Neme,R., Noguchi,H., Minakuchi, Y., Suzuki, M., Kawai-Toyooka, H., Smith, D.R., Sparks, H., Anderson, J., Bakaric, R., Luria, V., Karger, A., Kirschner, M.W., Durand, P.M., Michod, R.E., Nozaki, H., Olson, B.J.
2016
The Gonium pectorale genome demonstrates co-option of cell cycle regulation during the evolution of multicellularity.
Nat. Commun.,
7,
11370 (article ID).
Strain(s): 2863 PubMed: 27102219 DOI: 10.1038/ncomms11370 |
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Hara, Y.
1990
Chattonella ovata Y. Hara et Chihara mss.
In Red Tide Organisms in Japan - An Illustrated Taxonomic Guide, Eds. by Fukuyo, Y., Takano, H., Chihara, M. & Matsuoka, K., Uchida Rokakuho, Tokyo,
pp. 340-341 (in Japanese with English summary).
Strain(s): 603 |
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Hara, Y. & Chihara, M.
1982
Ultrastructure and taxonomy of Chattonella (Class Raphidophyceae) in Japan.
Jpn. J. Phycol. (Sôrui),
30,
47-56 (in Japanese with English summary).
Keywords: Chattonella; Chattonella marina comb. nov.; Raphidophyceae; red tides; taxonomy; ultrastructure Strain(s): 161 |
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Hara, Y., Doi, K., Chihara, M.
1994
Four new species of Chattonella (Raphidophyceae, Chromophyta) from Japan.
Jpn. J. Phycol. (Sôrui),
42,
407-420.
Keywords: Chattonella; C. globosa; C. minima; C. ovata; C. verruculosa; Raphidophyceae; red tide organisms; taxonomy Strain(s): 118, 161, 603, 670, 849 |
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Hara, Y., Inouye, I., Chihara, M.
1985
Morphology and ultrastructure of Olisthodiscus luteus (Raphidophyceae) with special reference to the taxonomy.
Bot. Mag. Tokyo,
98,
251-262.
Keywords: Heterosigma; Olisthodiscus luteus; Raphidophyceae; red tide flagellate; taxonomy of Olisthodiscus; ultrastructure of Olisthodiscus Strain(s): 15 DOI: 10.1007/BF02488775 |
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Harada, K-I., Ozaki, K., Tsuzuki, S., Kato, H., Hasegawa, M., Kuroda, E. K., Arii, S., Tsuji, K.
2009
Blue color formation of cyanobacteria with b-cyclocitral.
J. Chem. Ecol.,
35,
1295-1301.
Keywords: b-cyclocitral; cyanobacteria; lysis; blue color formation; acid stress Strain(s): 73, 102, 103, 112, 298, 611, 808 PubMed: 19936836 DOI: 10.1007/s10886-009-9706-5 |
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Harada, N., Hirose, Y., Chihong, S., Kurita, H., Sato, M., Onodera, J., Murata, K., Itoh, F.
2021
A novel characteristic of a phytoplankton as a potential source of straight-chain alkanes.
Sci Rep,
11,
14190 (article ID).
Strain(s): 1001, 2779, 2780, 3367 PubMed: 34276049 DOI: 10.1038/s41598-021-93204-w |
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Harada, R., Hirakawa, Y., Yabuki, A., Kashiyama, Y., Maruyama, M., Onuma, R., Soukal, P., Miyagishima, S., Hampl, V., Tanifuji, G., Inagaki, Y.
2020
Inventory and evolution of mitochondrion-localized family a DNA polymerases in Euglenozoa.
Pathogens,
9,
257 (article ID).
Keywords: DNA replication; family A DNA polymerase; plant and protist organellar DNA polymerase; Trypanosomatida; Kinetoplastea; Diplonemea; Euglenida; Prokinetoplastina Strain(s): 381 PubMed: 32244644 DOI: 10.3390/pathogens9040257 |
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Haraguchi, Y. & Shimizu, T.
2021
Microalgal culture in animal cell waste medium for sustainable 'cultured food' production.
Arch. Microbiol.,
203,
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Assessment of herbicide effects on algal production in the Kokai River (Japan) using a model stream and Selenastrum bioassay.
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Keywords: Heterosigma akashiwo; nutrients; photoperiod; vertical migration Strain(s): 6 |
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Preparation of protoplasts from Chlorella ellipsoidea C-27.
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Morphology, molecular phylogeny and taxonomy of Gonium maiaprilis sp. nov. (Goniaceae, Chlorophyta) from Japan.
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Construction of river model biofilm for assessing pesticide effects.
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Characterization of a Chlorophyta microalga isolated from a microbial mat in Salar de Atacama (northern Chile) as a potential source of compounds for biotechnological applications.
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A deviant mitochondrial genetic code in prymnesiophytes (yellow-algae): UGA codon for tryptophan.
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UAG is a sense codon in several chlorophycean mitochondria.
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Streptomyces neyagawaensis as a control for the hazardous biomass of Microcystis aeruginosa (Cyanobacteria) in eutrophic freshwaters.
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Phylogenetic position of the Phacotaceae within the Chlamydophyceae as revealed by analysis of 18S rDNA and rbcL sequences.
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Electrophoretic karyotyping and chromosomal gene mapping of Chlorella.
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Transcription factor DUO1 generated by neo-functionalization is associated with evolution of sperm differentiation in plants.
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Endosymbiosis-related changes in ultrastructure and chemical composition of Chlorella variabilis (Archaeplastida, Chlorophyta) cell wall in Paramecium bursaria (Ciliophora, Oligohymenophorea).
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66,
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Inner ear development in cyclostomes and evolution of the vertebrate semicircular canals.
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An examination of algal bioassay method for agricultural chemicals and heavy metals in a water environment.
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The primitive rhodophyte Cyanidioschyzon merolae contains a semiamylopectin-type, but not an amylose-type, α-glucan.
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Appl. Biochem. Biotechnol.,
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Keywords: g-linolenic acid; Spirulina platensis; green algae; lipid; marine microalgae Strain(s): 39 DOI: 10.1007/BF02920244 |
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A receptor-like kinase, related to cell wall sensor of higher plants, is required for sexual reproduction in the unicellular charophycean alga, Closterium peracerosum-strigosum-littorale complex.
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Ecotoxicity testing of bioremediation agents for shoreline oil-spill clean up.
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Cryopreservation of microalgae using encapsulation-dehydration.
CryoLetters,
17,
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Keywords: Dunaliella tertiolecta; microalgae; cryopreservation; encapsulation-dehydration Strain(s): 8, 19, 22, 24, 27, 32, 44, 242, 375, 396, 422, 437 |
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Hirato, Y., Goto, M., Tokuhisa, M., Tanigawa, M., Nishimura, K.
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Crystallization and X-ray analysis of D-threonine aldolase from Chlamydomonas reinhardtii.
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Cloning and characterization of d-threonine aldolase from the green alga Chlamydomonas reinhardtii.
Phytochemistry,
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Hirayama, A., Sueyoshi, M. N., Nakano, T., Ota, Y., Kurita, H., Tasaki, M., Kuroiwa, Y., Kato, T., Serizawa, S., Kojima, K., Al-Maamari, R. S., Hasegawa, T., Thomas-Hall, S. R., Schenk, P. M.
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Bioresour. Technol.,
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Identification of Heterocapsa circularisquama by means of antibody.
Fish. Sci.,
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Keywords: identification; Heterocapsa; dinoflagellate; antibody Strain(s): 7, 235, 472, 473 DOI: 10.2331/fishsci.68.sup1_627 |
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A new method for identification of inter- and intra-species of the red tide algae Chattonella antiqua and Chattonella marina (Raphidophyceae) by means of monoclonal antibodies.
J. Phycol.,
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Keywords: Chattonella; identification; immunofluorescence; inter-species; intra-species; method; monoclonal antibody; red tide Strain(s): 1, 2, 14, 83, 84, 85, 86, 113, 114, 115, 116, 118, 121 DOI: 10.1111/j.1529-8817.1988.tb04488.x |
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1989
A new method for inter- and intra-species identification of red tide algae Chattonella antiqua and Chattonella marina by means of monoclonal antibodies.
In Red Tides: Biology, Environmental Science, and Toxicology, Eds. by Okaichi, T., Anderson, D. M. & Nemoto, T., Elsevier Science Pub., New York,
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Strain(s): 85, 86, 118, 121 |
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1980
Automatic analysing system for the liquid chromatography.
J. Gen. Edu. Dept., Niigata Univ.,
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Hirokawa, T., Hata, M., Takeda, H.
1982
Correlation between the starch level and the rate of starch synthesis during the developmental cycle of Chlorella ellipsoidea.
Plant Cell Physiol.,
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Keywords: 14C-fixation; cell cycle; Chlorella ellipsoidea; photosynthesis; starch accumulation; starch synthesis; synchronous culture Strain(s): 2170 |
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1958
Effect of hydrogen peroxide on the light-induced capacity of carbon dioxide-fixation in green algae.
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1998
Development of a database system useful for identification of Anabaena spp. (Cyanobacteria).
Phycol. Res.,
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Keywords: Anabaena; computer; cyanobacteria; database system; identification; morphology Strain(s): 810, 819, 826, 835 DOI: 10.1111/j.1440-1835.1998.tb00276.x |
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Hirooka, S., Hirose, Y., Kanesaki, Y., Higuchi, S., Fujiwara, T., Onuma, R., Era, A., Ohbayashi, R., Uzuka, A., Nozaki, H., Yoshikawa, H., Miyagishima, SY.
2017
Acidophilic green algal genome provides insights into adaptation to an acidic environment.
Proc. Natl. Acad. Sci. U. S. A.,
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Hirooka, S., Itabashi, T., Ichinose, T. M., Onuma, R., Fujiwara, T., Yamashita, S., Jong, L. W., Tomita, R., Iwane, A. H., Miyagishima, S.
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Life cycle and functional genomics of the unicellular red alga Galdieria for elucidating algal and plant evolution and industrial use.
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Efficient open cultivation of cyanidialean red algae in acidified seawater.
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Removal of hazardous phenols by microalgae under photoautotrophic conditions.
J. Biosci. Bioeng.,
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Keywords: green algae; cyanobacteria; nitrophenol; chlorophenol; bisphenol A; photoautotrophic conditions Strain(s): 19, 23, 44, 422, 437 PubMed: 16233393 DOI: 10.1016/S1389-1723(03)80130-5 |
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Degradation of 2,4-dinitrophenol by a mixed culture of photoautotrophic microorganisms.
Biochem. Eng. J.,
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Keywords: 2,4-Dinitrophenol; 2-Amino-4-nitrophenol; Anabaena variabilis; Anabaena cylindrica; Mixed culture Strain(s): 19, 23, 3284 DOI: 10.1016/j.bej.2005.03.018 |
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1984
Near-UV and blue light effects in cyanobacteria.
In Blue Light Effects in Biological Systems, Ed. by Senger, H., Springer-Verlag, Berlin,
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Hirose, M., Reimer, J. D., Hidaka, M., Suda, S.
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Phylogenetic analyses of potentially free-living Symbiodinium spp. Isolated from coral reef sand in Okinawa, Japan.
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Hirose, Y., Fujisawa, T., Ohtsubo, Y., Katayama, M., Misawa, N., Wakazuki, S., Shimura, Y., Nakamura, Y., Kawachi, M., Yoshikawa, H., Eki, T., Kanesaki, Y.
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Complete genome sequence of cyanobacterium Fischerella sp. NIES-3754, providing thermoresistant optogenetic tools.
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Hirose, Y., Fujisawa, T., Ohtsubo, Y., Katayama, M., Misawa, N., Wakazuki, S., Shimura, Y., Nakamura, Y., Kawachi, M., Yoshikawa, H., Eki, T., Kanesaki, Y.
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Complete genome sequence of cyanobacterium Leptolyngbya sp. NIES-3755.
GenomeA,
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Hirose, Y., Fujisawa, T., Ohtsubo, Y., Katayama, M., Misawa, N., Wakazuki, S., Shimura, Y., Nakamura, Y., Kawachi, M., Yoshikawa, H., Eki, T., Kanesaki, Y.
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Complete genome sequence of cyanobacterium Nostoc sp. NIES-3756, a potentially useful strain for phytochrome-based bioengineering.
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Hirose, Y., Katayama, M., Ohtsubo, Y., Misawa, N., Iioka, E., Suda, W., Oshima, K., Hanaoka, M., Tanaka, K., Eki, T., Ikeuchi, M., Kikuchi, Y., Ishida, M., Hattori, M.
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Complete genome sequence of cyanobacterium Geminocystis sp. strain NIES-3708, which performs type II complementary chromatic acclimation.
GenomeA,
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Strain(s): 3708 PubMed: 25953174 DOI: 10.1128/genomeA.00357-15 |
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Hirose, Y., Katayama, M., Ohtsubo, Y., Misawa, N., Iioka, E., Suda, W., Oshima, K., Hanaoka, M., Tanaka, K., Eki, T., Ikeuchi, M., Kikuchi, Y., Ishida, M., Hattori, M.
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Complete genome sequence of cyanobacterium Geminocystis sp. strain NIES-3709, which harbors a phycoerythrin-rich phycobilisome.
GenomeA,
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Strain(s): 3709 PubMed: 25931605 DOI: 10.1128/genomeA.00385-15 |
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Characterization of the genuine type 2 chromatic acclimation in the two Geminocystis cyanobacteria.
DNA Res.,
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Keywords: Cyanobacteria; chromatic acclimation; phycobilisome; cyanobacteriochrome Strain(s): 3708, 3709 PubMed: 28338901 DOI: 10.1093/dnares/dsx011 |
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Hirose, Y., Ohtsubo, Y., Misawa, N., Yonekawa, C., Nagao, N., Shimura, Y., Fujisawa, T., Kanesaki, Y., Katoh, H., Katayama, M., Yamaguchi, H., Yoshikawa, H., Ikeuchi, M., Eki, T., Nakamura, Y., Kawachi, M.
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Genome sequencing of the NIES Cyanobacteria collection with a focus on the heterocyst-forming clade.
DNA Res.,
28,
dsab024 (article ID).
Keywords: Cyanobacteria; genome; heterocyst; culture collection; taxonomy Strain(s): 19, 21, 22, 23, 25, 37, 50, 73, 267, 806, 932, 2098, 2100, 2107, 2109, 2111, 2130, 2135, 3275, 3585, 3757, 3974, 4070, 4073, 4074, 4075, 4101, 4102, 4103, 4106 PubMed: 34677568 DOI: 10.1093/dnares/dsab024 |
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Cryopreservation of Scenedesmus acutus and Pediastrum duplex in liquid nitrogen - Survival and growth after freezing.
Jpn. J. Freez. Dry.,
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Detection and identification of potentially toxic cyanobacteria: Ubiquitous distribution of Microcystis aeruginosa and Cuspidothrix issatschenkoi in Japanese lakes.
Harmful Algae,
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Keywords: Anatoxin-a; Automated rRNA intergenic spacer analysis (ARISA); Cuspidothrix issatschenkoi; Cyanotoxin; Microcystin; Microcystis aeruginosa Strain(s): 30, 40, 77, 102, 111, 230, 512, 843, 905, 928, 932, 937, 991, 1645, 1669, 1698, 1729, 1950, 2116 DOI: 10.1016/j.hal.2012.01.003 |
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Temporal variation in cyanobacteria species composition and photosynthetic activity in experimentally induced blooms.
J. Plankton Res.,
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Keywords: cyanobacterial bloom; DCMU [3'-(3,4-dichlorophenyl)-1',1'-dimethyl urea]; maximum quantum yieldMicrocystis aeruginosa Strain(s): 843 DOI: 10.1093/plankt/fbr040 |
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Hoef-Emden, K.
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Pitfalls of establishing DNA barcoding systems in protists: the cryptophyceae as a test case.
PLoS One,
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Strain(s): 274, 706, 708, 711, 712, 713, 714, 1004, 1370 PubMed: 22970104 DOI: 10.1371/journal.pone.0043652 |
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Hoef-Emden, K.
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Osmotolerance in the Cryptophyceae: Jacks-of-all-trades in the Chroomonas clade.
Protist,
165,
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Hoef-Emden, K.
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Revision of the genus Chroomonas HANSGIRG: The benefits of DNA-containing specimens.
Protist,
169,
662-681.
Keywords: Chroomonas; novel species; phylogeny; ancient DNA; revision; Cryptophyceae Strain(s): 708, 712, 1004 PubMed: 30125802 DOI: 10.1016/j.protis.2018.04.005 |
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Hoef-Emden, K., Melkonian, M.
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Revision of the genus Cryptomonas (Cryptophyceae): a combination of molecular phylogeny and morphology provides insights into a long-hidden dimorphism.
Protist,
154,
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Effect of oxygen on the light-enhanced dark carbon dioxide fixation in Chlorella cells.
Plant Physiol.,
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Hogetsu, D. & Miyachi, S.
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Effects of CO2 concentration during growth on subsequent photosynthetic CO2 fixation.
Plant Cell Physiol.,
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Hogetsu, D. & Miyachi, S.
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Role of carbonic anhydrase in photosynthetic CO2 fixation in Chlorella.
Plant Cell Physiol.,
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Keywords: carbonic anhydrase; Chlorella; CO2 fixation; photosynthesis; ribulose 1,5-bisphosphate carboxylase Strain(s): 2160 DOI: 10.1093/oxfordjournals.pcp.a075865 |
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Honda, D. & Inouye, I.
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Ultrastructure and taxonomy of a marine photosynthetic stramenopile Phaeomonas parva gen. et sp. nov. (Pinguiophyceae) with emphasis on the flagellar apparatus architecture.
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Keywords: chromophyte algae; flagellar apparatus; ; microtubular roots; Phaeomonas parva gen. et sp. nov.; phylogeny; Pinguiophyceae; stramenopiles Strain(s): 3895 DOI: 10.1046/j.1440-1835.2002.00258.x |
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Honda, D., Kawachi, M., Inouye, I.
1995
Sulcochrysis biplastida gen. et sp. nov.: Cell structure and absolute configuration of the flagellar apparatus of an enigmatic chromophyte alga.
Phycol. Res.,
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Keywords: bicosoecids; chromophytes; Chrysophyceae; flagellar apparatus; heterokonts; phagotrophy; Pedinellophyceae; Pelagophyceae; Sulcochrysis; taxonomy Strain(s): 3893 DOI: 10.1111/j.1440-1835.1995.tb00001.x |
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Detection of seven major evolutionary lineages in cyanobacteria based on the 16S rRNA gene sequence analysis with new sequences of five marine Synechococcus strains.
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48,
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Keywords: cyanobacteria; Synechococcus; phylogeny; ribosomal RNA; maximum-likelihood method; neighbor-joining method; rate homo- and heterogeneous models Strain(s): 27, 208, 510, 2116, 2118, 2119 PubMed: 10229577 DOI: 10.1007/PL00006517 |
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Carbon dioxide capture and nutrients removal utilizing treated sewage by concentrated microalgae cultivation in a membrane photobioreactor.
Bioresour. Technol.,
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Keywords: Carbon dioxide capture; Nutrients removal; Membrane photobioreactor; Microalgae; Botryococcus braunii Strain(s): 2199 PubMed: 23023237 DOI: 10.1016/j.biortech.2012.08.138 |
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Honda, R., Rukapan, W., Komura, H., Teraoka, Y., Noguchi, M., Hoek, E.M.V.
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Effects of membrane orientation on fouling characteristics of forward osmosis membrane in concentration of microalgae culture.
Bioresour. Technol.,
197,
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Keywords: Forward osmosis; Microalgae; Membrane fouling; Extracellular polymeric substances (EPS) Strain(s): 2170 PubMed: 26356114 DOI: 10.1016/j.biortech.2015.08.096 |
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Optimization of hydraulic retention time and biomass concentration in microalgae biomass production from treated sewage with a membrane photobioreactor.
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Gene expression of Microcystis aeruginosa during infection of cyanomyovirus Ma-LMM01.
Fish. Sci.,
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Keywords: Cyanophage; Ma-LMM01; Microcystis aeruginosa; Transcriptional regulation; Auxiliary; metabolic genes Strain(s): 298 DOI: 10.1007/s12562-013-0685-7 |
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Hondo, S., Takahashi, M., Osanai, T., Matsuda, M., Hasunuma, T., Tazuke, A., Nakahira, Y., Chohnan, S., Hasegawa, M., Asayama, M.
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Genetic engineering and metabolite profiling for overproduction of polyhydroxybutyrate in cyanobacteria.
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Characterization of alkane-producing Nostoc sp. isolated from a summer bloom for biofuel potential.
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Astaxanthin production by a highly photosensitive Haematococcus mutant.
Process Biochem.,
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Keywords: Haematococcus pluvialis; Astaxanthin; Photo-inducible mutant; Photo-sensitivity Strain(s): 144 DOI: 10.1016/j.procbio.2012.07.007 |
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Rapid selection of astaxanthin-hyperproducing Haematococcus mutant via azide-based colorimetric assay combined with oil-based astaxanthin extraction.
Bioresour. Technol.,
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Effect of red cyst cell inoculation and iron (II) supplementation on autotrophic astaxanthin production by Haematococcus pluvialis under outdoor summer conditions.
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Transcriptional responses of the marine diatom Chaetoceros tenuissimus to phosphate deficiency.
Gene,
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Keywords: Phosphorus-deficiency; Differentially expressed genes; RNA-seq; Nonphospholipid; Alkaline phosphatase; Diatom Strain(s): 3715 PubMed: 37549856 DOI: 10.1016/j.gene.2023.147695 |
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The genome of the diatom Chaetoceros tenuissimus carries an ancient integrated fragment of an extant virus.
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Strain(s): 3715 PubMed: 34819553 DOI: 10.1038/s41598-021-00565-3 |
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Honjo, M., Matsui, K., Ueki, M., Nakamura, R., Fuhrman, J. A., Kawabata, Z.
2006
Diversity of virus-like agents killing Microcystis aeruginosa in a hyper-eutrophic pond.
J. Plankton Res.,
28,
407-412.
Strain(s): 298 DOI: 10.1093/plankt/fbi128 |
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Hoppenrath, M., Yubuki, N., Stern, R., Leander, B. S.
2017
Ultrastructure and molecular phylogenetic position of a new marine sand-dwellin dinoflagellate from British Columbia, Canada: Pseudadenoides polypyrenoides sp. nov. (Dinophyceae).
Eur. J. Phycol.,
52,
208-224.
Keywords: Clone libraries; depth gradient; microscopy; NGS library; oxyphotobacteriav; stromatolites; taxonomy Strain(s): 1367 DOI: 10.1080/09670262.2016.1274788 |
|
Hori, K. Maruyama, F., Fujisawa, T., Togashi, T., Yamamoto, N., Seo, M., Sato, S., Yamada, T., Mori, H., Tajima, N., Moriyama, T., Ikeuchi, M., Watanabe, M., Wada, H., Kobayashi, K., Saito, M., Masuda, T., Sasaki-Sekimoto, Y., Mashiguchi, K., Awai, K., Shimojima, M., Masuda, S., Iwai, M., Nobusawa, T., Narise, T., Kondo, S., Saito, H., Sato, R., Murakawa, M., Ihara, Y., Oshima-Yamada, Y., Ohtaka, K., Satoh, M., Sonobe, K., Ishii, M., Ohtani, R., Kanamori-Sato, M., Honoki, R., Miyazaki, D., Mochizuki, H., Umetsu, J., Higashi, K., Shibata, D., Kamiya, Y., Sato, N., Nakamura, Y., Tabata, S., Ida, S., Kurokawa, K., Ohta, H.
2014
Klebsormidium flaccidum genome reveals primary factors for plant terrestrial adaptation.
Nat. Commun.,
5,
3978 (article ID).
Strain(s): 2285 PubMed: 24865297 DOI: 10.1038/ncomms4978 |
|
Hori, S., Sekimoto, H., Abe, J.
2012
Properties of cell surface carbohydrates in sexual reproduction of the Closterium peracerosum–strigosum–littorale complex (Zygnematophyceae, Charophyta).
Phycol. Res.,
60,
254-260.
Keywords: cell-cell recognition; Closterium; ConcanavalinA; conjugation; lectin; Lycopersicon esculentum lectin; sexual reproduction Strain(s): 67, 68 DOI: 10.1111/j.1440-1835.2012.00656.x |
|
Horiguchi, T.
1996
Haramonas dimorpha gen. et sp. nov. (Raphidophyceae), a new marine raphidophyte from Australian mangrove.
Phycol. Res.,
44,
143-150.
Keywords: Haramonas dimorpha gen et sp. nov.; mangrove; Raphidophyceae; taxonomy; tubular invagination; ultrastructure Strain(s): 716 DOI: 10.1111/j.1440-1835.1996.tb00043.x |
|
Horikoshi, S., Hidaka, T., Nishimura, F., Kishimoto, N.
2024
Development of separation and recovery technology of cultured Euglena gracilis using activated sludge for anaerobic digestion.
Bioresour. Technol. Reports,
25,
101790 (article ID).
Keywords: Methane fermentation; Sewage treatment plant; Waste activated sludge Strain(s): 49 DOI: 10.1016/j.biteb.2024.101790 |
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Hoshina, R. & Fujiwara, Y.
2013
Molecular characterization of Chlorella cultures of the National Institute for Environmental Studies culture collection with description of Micractinium inermum sp. nov., Didymogenes sphaerica sp. nov., Didymogenes soliella sp. nov., (Chlorellaceae, Trebouxiophyceae).
Phycol. Res.,
61,
124-132.
Keywords: Chlorella; Didymogenes; group 1 intron; internal transcribed spacer 2; Micractinium; species concept Strain(s): 2167, 2171, 2173, 2330 DOI: 10.1111/pre.12010 |
|
Hoshina, R. & Imamura, N.
2008
Eu-Chlorella large subunit rDNA sequences and group I introns in ribosomal DNA of the paramecian symbiotic alga NC64A.
Phycol. Res.,
56,
21-32.
Keywords: Chlorella vulgaris; group I intron; intron phylogeny; intron transposition; large subunit ribosomal DNA; NC64A Strain(s): 227 DOI: 10.1111/j.1440-1835.2008.00481.x |
|
Hoshina, R. & Imamura, N.
2009
Phylogenetically close group I introns with different positions among Paramecium bursaria photobionts imply a primitive stage of intron diversification.
Mol. Biol. Evol.,
26,
1309-1319.
Keywords: degenerative homing; intron diversification; intron transposition; Paramecium bursaria symbiotic algae; reverse splicing Strain(s): 2541 PubMed: 19279084 DOI: 10.1093/molbev/msp044 |
|
Hoshina, R. & Nakada, T.
2018
Carolibrandtia nom. nov. as a replacement name for Brandtia Hoshina (Chlorellaceae, Trebouxiophyceae).
Phycol. Res.,
66,
82-83.
Keywords: Chlorella-like alga; ciliate; later homonym; nomenclature; photobiont; symbiosis Strain(s): 4032, 4033, 4034 DOI: 10.1111/pre.12208 |
|
Hoshina, R., Hayakawa, M. M., Kobayashi, M., Higuchi, R., Suzaki, T.
2020
Pediludiella daitoensis gen. et sp. nov. (Scenedesmaceae, Chlorophyceae), a large coccoid green alga isolated from a Loxodes ciliate.
Sci Rep,
10,
628 (article ID).
Strain(s): 4031 PubMed: 31959793 DOI: 10.1038/s41598-020-57423-x |
|
Hoshina, R., Iwataki, M., Imamura, N.
2010
Chlorella variabilis and Micractinium reisseri sp. nov. (Chlorellaceae, Trebouxiophyceae): Redescription of the endosymbiotic green algae of Paramecium bursaria (Peniculia, Oligohymenophorea) in the 120th year.
Phycol. Res.,
58,
188-201.
Keywords: Chlorella variabilis; ITS2; Micractinium reisseri; Paramecium bursaria; species concept Strain(s): 2540, 2542 DOI: 10.1111/j.1440-1835.2010.00579.x |
|
Hoshina, R., Kamako, S.-I., Imamura, N.
2004
Phylogenetic position of endosymbiotic green algae in Paramecium bursaria Ehrenberg from Japan.
Plant Biol.,
6,
447-453.
Keywords: 18S rDNA; Chlorella; endosymbiont; ITS; Paramecium bursaria; phylogeny Strain(s): 2540, 2541 DOI: 10.1055/s-2004-820888 |
|
Hoshina, R., Kato, Y., Kamako, S., Imamura, N.
2005
Genetic evidence of "American" and "European" type symbiotic algae of Paramecium bursaria Ehrenberg.
Plant Biol.,
7,
526-532.
Keywords: 18S rDNA; "American"; "European"; Chlorella; ITS; Paramecium bursaria; Phylogeny Strain(s): 2540, 2541 DOI: 10.1055/s-2005-865912 |
|
Hoshina, R., Kobayashi, M., Suzaki, T., Kusuoka, Y.
2018
Brandtia ciliaticola gen. et sp. nov. (Chlorellaceae, Trebouxiophyceae) a common symbiotic green coccoid of various ciliate species.
Phycol. Res.,
66,
76-81.
Keywords: Chlorella; genus definition; rRNA structure Strain(s): 4032, 4033, 4034 DOI: 10.1111/pre.12194 |
|
Hoshina, R., Tsukii, Y., Harumoto, T., Suzaki, T.
2021
Characterization of a green Stentor with symbiotic algae growing in an extremely oligotrophic environment and storing large amounts of starch granules in its cytoplasm.
Sci Rep,
11,
2865 (article ID).
Strain(s): 3374 PubMed: 33536497 DOI: 10.1038/s41598-021-82416-9 |
|
Hosoda, K., Seno, S., MurakamiN., Matsuda, H., Osada, Y., Kamiura, R., Kondoh, M.
2024
Synthetic model ecosystem of 12 cryopreservable microbial species allowing for a noninvasive approach.
Biosystems,
235,
105087 (article ID).
Keywords: Synthetic ecosystem; Experimental model ecosystem; Microbial microcosm; Machine learning Strain(s): 21, 35, 227, 2236 PubMed: 37989470 DOI: 10.1016/j.biosystems.2023.105087 |
|
Hosoi-Tanabe, S. & Sako, Y.
2005
Species-specific detection and quantification of toxic marine Dinoflagellates Alexandrium tamarense and A. catenella by reai-time PCR assay.
Mar. Biotechnol.,
7,
506-514.
Keywords: toxic dinoflagellate; — Alexandrium; paralytic shellfish poisoning (PSP); real-time PCR; species-specific identification; quantification Strain(s): 1, 7, 12, 293, 331, 559, 603, 670 PubMed: 16007374 DOI: 10.1007/s10126-004-4128-4 |
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Hosoi-Tanabe, S., Honda, D., Fukaya, S., Otake, I., Inagaki, Y., Sako, Y.
2007
Proposal of Pseudochattonella verruculosa gen. nov., comb. nov. (Dictyochophyceae) for a formar rephidophycean alga Chattonella verruculosa, based on 18S rDNA phylogeny and ultrastructural characteristics.
Phycol. Res.,
55,
185-192.
Keywords: Chatonella verruculosa; Dictyochophyceae; flagellar apparatus; harmful algal bloom; phylogenetic analysis; Pseudochattonella verruculosa; Raphidophyceae Strain(s): 670 DOI: 10.1111/j.1440-1835.2007.00461.x |
|
Hosoi-Tanabe, S., Otake, I., Sako, Y.
2006
Phylogenetic analysis of noxious red tide flagellates Chattonella antiqua, C. marina, C. ovata, and C. verruculosa (Raphidophyceae) based on the rRNA gene family.
Fish. Sci.,
72,
1200-1208.
Keywords: Chattonella; genetic homogeneity; phylogenetic analysis; Raphidophyceae; rRNA gene family Strain(s): 1, 5, 86, 121, 558, 559, 603, 670 DOI: 10.1111/j.1444-2906.2006.01277.x |
|
Hosokawa, Y., Miki-Noumura, T.
1987
Bending motion of Chlamydomonas axonemes after extrusion of central-pair microtubules.
J. Cell Biol.,
105,
1297-1301.
Strain(s): 2239 |
|
Hosomi, M. & Sudo, R.
1979
Studies on the effects of sediments on algal growth - Algal growth potential of sediments.
Res. Rep. Natl. Inst. Environ. Stud.,
No. 6,
115-121 (in Japanese with English summary).
Strain(s): 35 |
|
Hosoya, R., Hamana, K., Isobe, M., Yokota, A.
2005
Polyamine distribution profiles within Cyanobacteria.
Microbiol. Cult. Coll.,
21,
3-8.
Keywords: cyanobacteria; homospermidine; polyamine; spermidine Strain(s): 19, 21, 22, 28, 30, 34, 37, 41, 44, 45, 50, 73, 78, 79, 80, 81, 204, 208, 510, 512, 515, 592, 593, 610, 843, 846, 847, 2093, 2096, 2098, 2100, 2102, 2107, 2108, 2118, 2119, 2123, 2124, 2125, 2126, 2128, 2129, 2131, 2132, 3259, 3275, 3276, 3277 |
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Hou, X., Yan, Y., Wang, Y., Jiang, T., Zhang, X., Dai, X., Igarashi, Y., Luo, F., Yang, C.
2023
An insight into algicidal characteristics of Bacillus altitudinis G3 from dysfunctional photosystem and overproduction of reactive oxygen species.
Chemosphere,
310,
136767 (article ID).
Keywords: Harmful cyanobacterial blooms; Photosynthesis; Electron transfer; ROS Strain(s): 843 PubMed: 36241112 DOI: 10.1016/j.chemosphere.2022.136767 |
|
Houdai, T., Matsuoka, S., Matsumori, N., Murata, M.
2004
Membrane-permeabilizing activities of amphidinol 3, polyene-polyhydroxy antifungal from a marine dinoflagellate.
Biochem. Biophys. Acta,
1667,
91-100.
Keywords: amphidinol; Amphidinium klebsii; amphotericin B Strain(s): 613 PubMed: 15533309 DOI: 10.1016/j.bbamem.2004.09.002 |
|
Houdai, T., Matsuoka, S., Morsy, N., Matsumori, N., Satake, M., Murata, M.
2005
Hairpin conformation of amphidinols possibly accounting for potent membrane permeabilizing activities.
Tetrahedron,
61,
2795-2802.
Keywords: amphidinol membrane-permeabilizaion Strain(s): 613 DOI: 10.1016/j.tet.2005.01.069 |
|
Houdai, T., Matsuoka, S., Murata, M., Satake, M., Ota, S., Oshima, Y., Rhodes, L. L.
2001
Acetate labeling patterns of dinoflagellate polyketides, amphidinols 2, 3 and 4.
Tetrahedron,
57,
5551-5555.
Keywords: dinoflagellate; polyketides; biosynthesis; amphidinol; Amphidinium; isotopic labelling Strain(s): 613 DOI: 10.1016/S0040-4020(01)00481-1 |
|
Houndan, A., Billard, C., Marie, D., Not, F., Sáez, A. G., Young, J. R., Probert, I.
2003
Holococcolithophore-heterococcolithophore (Haptophyta) life cycles: flow cytometric analysis of relative ploidy levels.
Systematics and Biodiversity,
4,
453-465.
Keywords: Coccolithophore; haplo-diploid; Haptophyta; heterococcolith; holococcolith; life cycle; microalgae; ploidy Strain(s): 2694, 2697 DOI: 10.1017/S1477200003001270 |
|
Hovde, B. T., Deodato, C. R., Andersen, R. A., Starkenburg, S. R., Barlow, S.B., Cattolico, R.A.
2019
Chrysochromulina: Genomic assessment and taxonomic diagnosis of the type species for an oleaginous algal clade.
Algal Res.,
37,
307-319.
Keywords: Haptophyta; Chrysochromulina genome; nad evolution; FtsZ phylogeny; Meiosis; Taxon diagnosis Strain(s): 562 DOI: 10.1016/j.algal.2018.11.023 |
|
Howe, A. T., Bass, D., Vickerman, K., Chao, E. E., Cavalier-Smith, T.
2009
Phylogeny, taxonomy, and astounding genetic diversity of Glissomonadida ord. nov., the dominant gliding zooflagellates in soil (Protozoa: Cercozoa).
Protist,
160,
159-189.
Keywords: Glissomonadida; Sandonidae; Allapsidae; Bodomorphidae; Heteromita; phylogeny Strain(s): 2414, 2415, 2418, 2419, 2421, 2422, 2423, 2424, 2425, 2426, 2427, 2428, 2429, 2430 PubMed: 19324594 DOI: 10.1016/j.protis.2008.11.007 |
|
Htet, AN., Noguchi, M., Ninomiya, K., Tsuge, Y., Kuroda, K., Kajita, S., Masai, E., Katayama, Y., Shikinaka, K., Otsuka, Y., Nakamura, M., Honda, R., Takahashi, K.
2018
Application of microalgae hydrolysate as a fermentation medium for microbial production of 2-pyrone 4,6-dicarboxylic acid.
J. Biosci. Bioeng.,
125,
717-722.
Keywords: Microalgae; Chlorella emersonii; Acid hydrolysis; Fermentation; Escherichia coli; 2-pyrone 4,6-dicarboxylic acid Strain(s): 2151 PubMed: 29395960 DOI: 10.1016/j.jbiosc.2017.12.026 |
|
Hu, ZY., Li, YT., Sommerfeld, M., Chen, F., Hu, Q.
2008
Enhanced protection against oxidative stress in an astaxanthin-overproduction Haematococcus mutant (Chlorophyceae).
Eur. J. Phycol.,
43,
365-376.
Keywords: astaxanthin; carotenogenesis; flow cytometry; Haematococcus pluvialis; oxidative stress; pigment mutant Strain(s): 144 DOI: 10.1080/09670260802227736 |
|
Hua, C., Ludsinb, S. A., Martinc, J. F., Dittmannd, E., Lee, J.
2018
Mycosporine-like amino acids (MAAs)—producing Microcystis in Lake Erie:Development of a qPCR assay and insight into its ecology.
Harmful Algae,
77,
1–10.
Keywords: Shinorine; Porphyra; UV irradiation; Sunscreen; Eutrophication; Harmful algal bloom Strain(s): 843 PubMed: 30005796 DOI: 10.1016/j.hal.2018.05.010 |
|
Hua, J., Lee, R.W.
2012
Factors affecting codon bias in the mitochondrial genomes of the Streptophyte Mesostigma viride and the Chlorophyte Chlamydomonas reinhardtii.
J. Eucaryot. Microbiol.,
59,
287-289.
Keywords: Green algae; mutation; selection; synonymous codon usage Strain(s): 296 PubMed: 22340021 DOI: 10.1111/j.1550-7408.2011.00613.x |
|
Hua, JM., Smith, D. R., Borza, T., Lee, R. W.
2012
Similar relative mutation rates in the three genetic compartments of Mesostigma and Chlamydomonas.
Protist,
163,
105-115.
Keywords: Chlamydomonas; genome architecture; Mesostigma; mutation rate; silent substitution rate Strain(s): 296, 476 PubMed: 21621456 DOI: 10.1016/j.protis.2011.04.003 |
|
Huang, Y., Lee, H., Lai, C.
2013
Engineering of the growth environment of microalgae with high biomass and lipid productivity.
J. Nanosci. Nanotechnol.,
13,
2117-2121.
Keywords: Microalgae; Cultivation Environment; Carbon Dioxide; Biomass Productivity; Lipid Productivity Strain(s): 2199 DOI: 10.1166/jnn.2013.6877 |
|
Huang, Y.-T. & Su, C.-P.
2014
High lipid content and productivity of microalgae cultivating under elevated carbon dioxide.
Int. J. Environ. Sci. Technol.,
11,
703-710.
Keywords: Biodiesel; Chlorella; Global warming; Light intensity Strain(s): 2173 DOI: 10.1007/s13762-013-0251-y |
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Huang, Y-T., Lai, C-W., Wu, B-W., Lin, K-S., Wu, J.C.S., Md Shahriar A Hossain, Yamauchi, Y., Wu, C.-W.
2017
Advances in bioconversion of microalgae with high biomass and lipid productivity.
J. Taiwan Inst. Chem. Eng.,
79,
37-42.
Keywords: Bioconversion; Fatty acid; methyl esters; Illumination; Microalgae Strain(s): 2199 DOI: 10.1016/j.jtice.2017.05.026 |
|
Hunsperger, H. M., Randhawa, T., Cattolico, R. A.
2015
Extensive horizontal gene transfer, duplication, and loss of chlorophyll synthesis genes in the algae.
BMC Evol. Biol.,
15,
16 (article ID).
Keywords: Chlorophyll synthesis; Horizontal gene transfer; Endosymbiotic gene transfer; Gene duplication; Algae; Protochlorophyllide Strain(s): 293, 360, 484, 1363, 2140 PubMed: 25887237 DOI: 10.1186/s12862-015-0286-4 |
|
Huss, V. A. R., Wein, K. H., Kessler, E.
1988
Deoxyribonucleic acid reassociation in the taxonomy of the genus Chlorella.
Arch. Mikrobiol.,
150,
509-511.
Strain(s): 2163 |
|
Hwang, S. W., Choi, H. I., Sim, S. J.
2019
Acidic cultivation of Haematococcus pluvialis for improved astaxanthin production in the presence of a lethal fungus.
Bioresour. Technol.,
278,
138-144.
Keywords: Haematococcus pluvialis; Paraphysoderma sedebokerensis; Acidic cultivation; Stress relief; Astaxant Strain(s): 144 PubMed: 30685617 DOI: 10.1016/j.biortech.2019.01.080 |
|
Handa, S., Horiguchi, T., Ohmura, Y., Higuchi, M.
2013
Rufusiella insignis (Gloeodiniaceae, Phytodiniales), an aerial Dinoflagellate newly found in Japan.
Hikobia,
16,
311-314 (in Japanese with English summary).
Strain(s): 4061 |
|
Handa, S., Shoda, I., Mizobuchi, A., Nakahara-Tsubota, M., Tsubota, H.
2014
Trentepohlia bosseae var. samoensis (Trentepohliaceae, Ulvophyceae), an aerial alga newly found in Japan.
J. Jpn. Bot.,
89,
59-64 (in Japanese with English summary).
Keywords: central pit; green alga: Japan; morphology; new record; Phycopeltis; Printzina; Trentepohlia Strain(s): 3358, 3359, 3360 |
|
Harada, K.
2022
Elucidation of phenomena involving cyanobacteria in freshwater ecosystem by chemically ecological approach.
YAKUGAKU ZASSHI,
142,
39-64 (in Japanese with English summary).
Keywords: chemical ecology; water bloom, β-cyclocitral, density stress, quorum sensing Strain(s): 102, 298, 843 DOI: 10.1248/yakushi.21-00146 |
|
Hamasaki, A.
2017
Study of the optimal cultivation for micro-algae.
The 12th Conference on Biomass Science,
27-28 (in Japanese with English summary).
Strain(s): 226 DOI: 10.20550/jiebiomassronbun.12.0_27 |
|
Hatakeyama, S.
2006
Assessment of overall herbicide effects on river ecosystems through periphyton and aquatic plants.
Jpn. J. Environ. Toxicol.,
9,
51-60 (in Japanese with English title).
Strain(s): 35 DOI: 10.11403/jset.9.51 |
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