Search Reference

Cadel-Six, S., Dauga, C., Castets, A. M., Rippka, R., Bouchier, C., de Marsac, N. T., Welker, M. 2008 Halogenase genes in nonribosomal peptide synthetase gene clusters of Microcystis (Cyanobacteria): sporadic distribution and evolution. Mol. Biol. Evol., 25, 2031-2041.
Keywords: halogenase; cyanopeptolin; aeruginosin; DNA rearrangement; secondary peptide metabolite; chlorination; internal transcribed spacer; phylogeny
Strain(s): 8998101102298 
PubMed: 18614525
DOI: 10.1093/molbev/msn150
Canini, A., Civitareale, P., Marini, S., Grilli Caiola, M., Rotilio, G. 1992 Purification of iron superoxide dismutase from the cyano-bacterium Anabaena cylindrica Lemm. and localization of the enzyme in heterocysts by immunogold labeling. Planta, 187, 438-444.
Keywords: Anabaena; heterocyst; iron-superoxide dismutase (immunogold labeling)
Strain(s): 19 
PubMed: 24178137
DOI: 10.1007/BF00199961
Cannell, R. J. P., Owsianka, A. M., Walker, J. M. 1988 Results of a large-scale screening programme to detect antibacterial activity from freshwater algae. Br. Phycol. J., 23, 41-44.
Strain(s): 6862287 
DOI: 10.1080/00071618800650051
Cao, H., Shimura, Y., Kawachi, M., Yin, Y. 2014 Draft genome sequence of the toxic bloom-forming cyanobacterium Aphanizomenon flos-aquae NIES-81. GenomeA, 2, e00044-14 (article ID).
Strain(s): 81 
PubMed: 24526634
DOI: 10.1128/genomeA.00044-14
Cao, H., Shimura, Y., Steffen, M. M., Yang, Z., Lu, J., Joel, A., Jenkins, L., Kawachi, M., Yin, Y., Garcia-Pichel, F. 2020 The trait repertoire enabling cyanobacteria to bloom assessed through comparative genomic complexity and metatranscriptomics. mBio, 11, e01155-20 (article ID).
Keywords: Symbiodiniaceae; Durusdinium trenchii; WGS; MAAs; GMC oxidoreductase
Strain(s): 81843 
PubMed: 32605986
DOI: 10.1128/mBio.01155-20
Carbone, D. A., Pellone, P., Lubritto, C., Ciniglia, C. 2021 Evaluation of microalgae antiviral activity and their bioactive compounds. Antibiotics-Basel, 10, 746 (article ID).
Keywords: microalgae; virus; antiviral compounds; SARS-CoV-2; microalgae antiviral activity; coronavirus disease
Strain(s): 204 
PubMed: 34202941
DOI: 10.3390/antibiotics10060746
Cardol, P., Bailleul, B., Rappaport, F., Derelle, E., Béal, D., Breyton, C., Bailey, S., Wollman, F. A., Grossman, A., Moreau, H., Finazzi, G. 2008 An original adaptation of photosynthesis in the marine green alga Ostreococcus. Proc. Nati. Acad. Sci. U. S. A., 105, 7881-7886.
Keywords: marine environment; PTOX; water cycle; eletron flow; photoprotection
Strain(s): 2674 
PubMed: 18511560
DOI: 10.1073/pnas.08027621
Carefoot, J. R. 1966 Sexual reproduction and intercrossing in Volvulina steinii. J. Phycol., 2, 150-156.
Strain(s): 896897898 
PubMed: 27053484
DOI: 10.1111/j.1529-8817.1966.tb04614.x
Casamatta, D. A., Villanueva, C. D., Garvey, A. D., Stocks, H. S., Vaccarino, M., Dvořák, P., Hašler, P., Johansen, J. R. 2020 Reptodigitus chapmanii (Nostocales, Hapalosiphonaceae) gen. nov.: a unique Nostocalean (Cyanobacteria) genus based on a polyphasic approach. J. Phycol., 56, 425-436.
Keywords: cyanobacteria; Phylogeny; 16S rDNA; systematics
Strain(s): 59237544106 
PubMed: 31837017
DOI: 10.1111/jpy.12954
Cattolico, R. A., Jacobs, M. A., Zhou, Y., Chang, J., Duplessis, M., Lybrand, T., McKay, J., Ong, H. C., Sims, E., Rocap, G. 2008 Chloroplast genome sequencing analysis of Heterosigma akashiwo CCMP452 (West Atlantic) and NIES293 (West Pacific) strains. BMC Genomics, 9, 211-230.
Strain(s): 293 
PubMed: 18462506
DOI: 10.1186/1471-2164-9-211
Cellamare, M., Duval, C., Drelin, Y., Djediat, C., Touibi, N., Agogué, H., Leboulanger, C., Ader, M., Bernard, C. 2018 Characterization of phototrophic microorganisms and description of new cyanobacteria isolated from the saline-alkaline crater-lake Dziani Dzaha (Mayotte, Indian Ocean). FEMS Microbiol. Ecol., 94 fiy108 (article ID).
Keywords: cyanobacteria; microalgae; crater-lake; saline-alkaline lake; polyphasic approach; Arthrospira
Strain(s): 1410 
PubMed: 29878107
DOI: 10.1093/femsec/fiy108
Chamizo, S., Adessi, A., Certini, G., De Philippis, R. 2020 Cyanobacteria inoculation as a potential tool for stabilization of burned soils. Restor. Ecol., 28, S106-S114.
Keywords: biocrust; erosion; exopolysaccharide content; hydrophobicity; penetration resistance; wildfire
Strain(s): 19562121 
DOI: 10.1111/rec.13092
Chamizo, S., Adessi, A., Mugnai, G., Simiani, A., De Philippis, R. 2019 Soil type and cyanobacteria species influence the macromolecular and chemical characteristics of the polysaccharidic matrix in induced biocrusts. Microb. Ecol., 78, 482–493.
Keywords: Biological soil crust; Cyanobacteria inoculation; Molecular weight; Monosaccharide composition; Loosely bound; EPS; Tightly bound EPS
Strain(s): 19562121 
PubMed: 30535915
DOI: 10.1007/s00248-018-1305-y
Chamizo, S., Mugnai, G., Rossi, F., Certini, G., De Philippis, R. 2018 Cyanobacteria inoculation improves soil stability and fertility on different textured soils: Gaining insights for applicability in soil restoration. Front. Environ. Sci., 6, 49 (article ID).
Keywords: autotrophic organisms; biocrust development; exopolysaccharides; organic carbon; soil nitrogen, soil; degradation
Strain(s): 19562121 
DOI: 10.3389/fenvs.2018.00049
Chen, M., Rubin, G. M., Jiang, G., Raad, Z., Ding, Y. 2021 Biosynthesis and heterologous production of mycosporine-like amino acid palythines. J. Org. Chem., ,
Strain(s): 25 
PubMed: 34006097
DOI: 10.1021/acs.joc.1c00368
Chen, M., Tian, L.-L., Ren, C.-Y., Xu, C.-Y., Wang, Y.-Y., Li, L. 2019 Extracellular polysaccharide synthesis in a bloom-forming strain of Microcystis aeruginosa: implications for colonization and buoyancy. Sci Rep, 9, 1251 (article ID).
Strain(s): 87889820429884324812549 
PubMed: 30718739
DOI: 10.1038/s41598-018-37398-6
Cheng, T., Zhang, W., Xhang, W., Yuan, G., Wang, H., Liu, T. 2017 An oleaginous filamentous microalgae Tribonema minus exhibits high removing potential of industrial phenol contaminants. Bioresour. Technol., 238, 749-754.
Keywords: Oleaginous filamentous microalgae; Phenol removal; Phenol-uptake capacity; Residual phenol
Strain(s): 2175 
PubMed: 28526282
DOI: 10.1016/j.biortech.2017.05.040
Chernomor, O., Peters, L., Schneidewind, J., Loeschcke, A., Knieps-Grünhagen, E., Schmitz, F., von Lieres, E.,Kutta, R. J., Svensson, V., Jaeger, K., Drepper, T.,von Haeseler, A., Krauss, U. 2021 Complex evolution of light-dependent protochlorophyllide oxidoreductases in aerobic anoxygenic phototrophs: origin, phylogeny and function. Mol. Biol. Evol., 38, 819-837.
Keywords: light-driven enzyme; chlorophyll biosynthesis; evolution; aerobic anoxygenic phototrophic bacteria; photosynthesis
Strain(s): 9812135 
PubMed: 32931580
DOI: 10.1093/molbev/msaa234
Chihara, M., Inouye, I., Takahata, N. 1986 Oltmannsiellopsis., a new genus of marine flagellate (Dunaliellaceae, Chlorophyceae). Arch. Protistenk., 132, 313-324.
Strain(s): 359360 
DOI: 10.1016/S0003-9365(86)80026-4
Chin, Y.-Y., Chu, W.-L., Kok, Y.-Y., Phang, S.-M., Wong, C.-Y., Tan, B.-K., Mustafa, E. M. 2019 Sensitivity of selected tropical microalgae isolated from a farmland and a eutrophic lake to atrazine and endosulfan. J. Appl. Phycol., 31, 2981–299.
Keywords: Atrazine; Endosulfan; Microalgae; Oxidative stress; Chlorella; Scenedesmus
Strain(s): 35 
DOI: 10.1007/s10811-019-01800-1
China, S., Fujii, K. 2018 Isolation of high-CO2-acclimated Micractinium sp. strains from eutrophic reservoir water. Algal Res., 34, 126-133.
Keywords: Micractinium sp.; High-CO2-acclimation; Vitamin; γ-Aminobutyric acid; C18 unsaturated fatty acid
Strain(s): 41294130 
DOI: 10.1016/j.algal.2018.07.015
Chiu, Y.-T., Yen, H.-K., Lin, T.-F. 2016 An alternativemethodtoquantify2-MIB producing cyanobacteriain in drinking water reservoirs: Method development and field applications. Environ. Res., 151, 618-627.
Keywords: Cyanobacteria; 2-methylisoborneol(2-MIB); 2-MIB-synthesis gene(mibC gene); Tasteandodor; Real-timePCR
Strain(s): 8151282490521042116 
PubMed: 27607443
DOI: 10.1016/j.envres.2016.08.034
Cho, Y., Hidema, S., Omura, T., Koike, K., Koike, K., Oikawa, H., Konoki, K., Oshima, Y., Yotsu-Yamashita, M. 2021 SxtA localizes to chloroplasts and changes to its 3′UTR may reduce toxin biosynthesis in non-toxic Alexandrium catenella (Group I). Harmful Algae, 101, 101972 (article ID).
Keywords: Saxitoxin; Biosynthesis; Dinoflagellate; Chloroplast; Localization; 3′UTR
Strain(s): 678 
PubMed: 33526188
DOI: 10.1016/j.hal.2020.101972
Cho, Y., Ozeki, R., Yotsu-Yamashita, M., Oshima, Y. 2013 Single-cell analysis of paralytic shellfish toxins in Alexandrium tamarense by HPLC with post-column fluorescent derivatization. Harmful Algae, 25, 47-53.
Keywords: Single-cell analysis; Alexandrium tamarense; Paralytic shellfish toxins
Strain(s): 678 
DOI: 10.1016/j.hal.2013.02.005
Cho, Y.-L., Lee, Y.-C., Hsu, L.-C., Wang, C.-C., Chen, P.-C., Liu, S.-L., Teah, H.-Y., Liu, Y.-T., Tzou, Y.-M. 2020 Molecular mechanisms for Pb removal by Cyanidiales: a potential biomaterial applied in thermo-acidic conditions. Chem. Eng. J., 401, 125828 (article ID).
Keywords: Cyanidiales; Thermoacidophilic; Lead; Speciation; XAS; Protein secondary structure
Strain(s): 5513377 
DOI: 10.1016/j.cej.2020.125828
Choi, G-G., Ahn, C-Y., Oh, H-M. 2012 Phylogenetic relationships of Arthrospira strains inferred from 16S rRNA gene and cpcBA-IGS sequences. Algae, 27, 75-82.
Keywords: Arthrospira (Spirulina); cpcBA-IGS; phylogenetic analysis; 16S rRNA gene
Strain(s): 3946 
DOI: 10.4490/algae.2012.27.2.075
Choi, H. I., Lee, J. S., Choi, J. W., Shin, Y. S., Sung, Y. J., Hong, M. E., Kwak, H. S., Kim, C. Y., Sim, S. J. 2019 Performance and potential appraisal of various microalgae as direct combustion fuel. Bioresour. Technol., 273, 341-349.
Keywords: Microalgae; Solid fuel; Direct combustion; The holistic analyses; Negative emissions
Strain(s): 144 
PubMed: 30448687
DOI: 10.1016/j.biortech.2018.11.030
Choi, H. J., Joo, J.-H., Kim, J.-H., Wang, P., Ki, J.-S. 2018 Morphological characterization and molecular phylogenetic analysis of Dolichospermum hangangense (Nostocales, Cyanobacteria) sp. nov. from Han River, Korea. Algae, 33, 143-156.
Keywords: Dolichospermum hangangense; morphology; rbcLX; 16S rRNA; 16S-23S ITS
Strain(s): 817168116831934 
DOI: 10.4490/algae.2018.33.5.2
Choi, K., Imai, A., Kim, B., Matsushige, K. 2001 Properties of dissolved organic carbon (DOC) released by three species of blue-green algae. Korean J. Limnol., 34, 20-29.
Keywords: extracellular organic carbon; fractionation; blue-green algae; growth phases
Strain(s): 4474204 
Choi, K., Ueki, M., Imai, A., Kim, B., Kawabata, Z. 2004 Photoalteration of dissolved organic matter (DOM) released from Microcystis aeruginosa in different growth phases: DOM-fraction distribution and biodegradability. Arch. Hydrobiol., 159, 271-286.
Keywords: algal DOM; growth phase; UV effects; photoalteration; biodegradability; chemical composition
Strain(s): 843 
DOI: 10.1127/0003-9136/2004/0159-0271
Choi, Y. Y., Joun, J. M., Lee, J., Hong, M. E., Pham, H., Chang, W. S., Sim, S. J. 2017 Development of large-scale and economic pH control system for outdoor cultivation of microalgae Haematococcus pluvialis using industrial flue. Bioresour. Technol., 244, 1235-1244.
Keywords: Haematococcus pluvialis; Astaxanthin; Polymeric thin-film photobioreactor; Autotrophic buffer system; Flue gas
Strain(s): 144 
PubMed: 28647321
DOI: 10.1016/j.biortech.2017.05.147
Choi, YY., Hong, ME., Jin, ES., Woo, HM., Sim, SJ 2018 Improvement in modular scalability of polymeric thin-film photobioreactor for autotrophic culturing of Haematococcus pluvialis using industrial flue gas. Bioresour. Technol., 249, 519-526.
Keywords: Haematococcus pluvialis; Autotrophic; Bubble column photobioreactor; Scale-up; Hydrodynamic property
Strain(s): 144 
PubMed: 29078178
DOI: 10.1016/j.biortech.2017.10.060
Chong, J., Jackson, C., Kim, J. I., Yoon, H. S., Reyes-Prieto, A. 2014 Molecular markers from different genomic compartments reveal cryptic diversity within glaucophyte species. Mol. Phylogenet. Evol., 76, 181-188.
Keywords: Glaucophyta; Cyanophora; Glaucocystis; Cryptic species diversity; Archaeplastida
Strain(s): 76376496613691961 
PubMed: 24680917
DOI: 10.1016/j.ympev.2014.03.019
Chonudomkul, D., Yongmanitchai, W., Theeragool, G., Kawachi, M., Kasai, F., Kaya, K., Watanabe, M. M. 2004 Morphology, genetic diversity, temperature tolerance and toxicity of Cylindrospermopsis raciborskii (Nostocales, Cyanobacteria) strains from Thailand and Japan. FEMS Microbiol. Ecol., 48, 345-355.
Keywords: toxic cyanobacteria; Cylindrospermopsis raciborskii; STRR sequences; Thailand; Japan; low-temperature adapted group; genotypic clusters
Strain(s): 99199299310401041 
PubMed: 19712304
DOI: 10.1016/j.femsec.2004.02.014
Chu, C. Y., Liao, W. R., Huang, R., Lin, L. P. 2004 Haemagglutinating and antibiotic activities of freshwater microalgae. World J. Microbiol. Biotechnol., 20, 817–825.
Keywords: Antibiotic activity; erythrocytes; freshwater microalgae; haemagglutination
Strain(s): 22622721592163216521692175218922082211221322142229223122332240224122432247224832773284 
DOI: 10.1007/s11274-004-8712-6
Chumpolkulwong, N., Kakizono, T., Ishii, H. 1997 Enzymatic conversion of b-carotene to astaxanthin by cell-extracts of a green alga Haematococcus pluvialis. Biotechnol. Lett., 19, 443-446.
Strain(s): 144 
DOI: 10.1023/A:1018392010218
Churro, C., Semedo-Aguiar, A. P., Silva, A.D., Pereira-Leal, J. B., Leite, R. B. 2020 A novel cyanobacterial geosmin producer, revising GeoA distribution and dispersion patterns in Bacteria. Sci Rep, 10, 8679 (article ID).
Strain(s): 2521002111 
PubMed: 32457360
DOI: 10.1038/s41598-020-64774-y
Ciniglia, C., Cascone, C., Giudice, R. L., Pinto, G., Pollio, A. 2005 Application of methods for assessing the geno- and cytotoxicity of Triclosan to C. ehrenbergii. J. Hazard. Mater., 122, 227-232.
Keywords: Closterium ehrenbergii; Triclosan; sexual reproduction; vegetative reproduction; comet assay
Strain(s): 228229 
Coesel, P. F. M. 1991 Ammonium dependency in Closterium aciculare T. West, a planktonic desmid from alkaline, eutrophic waters. J. Plankton Res., 13, 913-922.
Strain(s): 258 
DOI: 10.1093/plankt/13.5.913
Coleman, A. W. 1959 Sexual isolation in Pandorina morum. J. Protozool., 6, 249-264.
Strain(s): 886887 
DOI: 10.1111/j.1550-7408.1959.tb04366.x
Coleman, A. W. 1988 The autofluorescent flagellum: a new phylogenetic enigma. J. Phycol., 24, 118-120.
Keywords: autofluorescence; Chrysophyceae; flagellum; fluorescence; heterokont; Ochromonas; photoreceptor; Prymnesium
Strain(s): 21422144 
DOI: 10.1111/j.1529-8817.1988.tb04465.x
Coleman, A.W. 2001 Biogeography and speciation in the Pandorina/Volvulina (Chlorophyta) superclade. J. Phycol., 37, 836-851.
Keywords: biogeography; ITS; Pandorina; Volvulina; Volvocaceae; phylogenetics; speciation; Yamagishiella
Strain(s): 583 
DOI: 10.1046/j.1529-8817.2001.01043.x
Connell, L. 2002 Rapid identification of marine algae (Raphidophyceae) using three-primer peR amplification of nuclear internal transcribed spacer (ITS) regions from fresh and archived material. Phycologia, 41, 15-21.
Strain(s): 115 
DOI: 10.2216/i0031-8884-41-1-15.1
Connell, L., Cattolico, R. A. 1996 Fragile algae: axenic culture of field-collected samples of Heterosigma carterae. Mar. Biol., 125, 421-426.
Strain(s): 293 
DOI: 10.1007/BF00346322
Conradi, F. D., Mullineaux, C. W., Wilde, A. 2020 The role of the cyanobacterial Type IV pilus machinery in finding and maintaining a favourable environment. Life-Basel, 10, 252 (article ID).
Strain(s): 2133 
PubMed: 33114175
DOI: 10.3390/life10110252
Crosbie, N. D., Pöckl, M., Weisse, T. 2003 Dispersal and phylogenetic diversity of nonmarine picocyanobacteria, inferred from 16S rRNA gene and cpcBA-intergenic spacer sequence analyses. Appl. Environ. Microbiol., 69, 5716-5721.
Strain(s): 13411342134313441345134613471348 
PubMed: 12957969
DOI: 10.1128/AEM.69.9.5716-5721.2003
Crosbie, N. D., Pöckl, M., Weisse, T. 2003 Rapid establishment of clonal isolates of freshwater autotrophic picoplankton by single-cell and single-colony sorting. J. Microbiol. Methods, 55, 361-370.
Keywords: cell culture; eukaryotic autotrophic picoplankton; flow cytometry; phycocyanin; phycoerythrin; Synechococcus
Strain(s): 13411342134313441345134613471348 
Cunningham, B. R., Greenwold, M. J., Lachenmyer, E. M., Heidenreich, K, M., Davis, A. C., Dudycha, J. L., Richardson, T. L. 2019 Light capture and pigment diversity in marine and freshwater cryptophytes. J. Phycol., 55, 552-564.
Strain(s): 697698701702708 
PubMed: 30468692
DOI: 10.1111/jpy.12816
Cunningham, Jr., F. X., Lee, H., Gantt, E. 2007 Carotenoid biosynthesis in the primitive red alga Cyanidioschyzon merolae. Eukaryot. Cell, 6, 533-545.
Strain(s): 13323377 
PubMed: 17085635
DOI: 10.1128/EC.00265-06
Curren, E., Teruaki, Y., Kuwahara, V. S., Leong, S. C. Y. 2019 Rapid profiling of tropical marine cyanobacterial communities. Reg. Stud. Mar. Sci., 25, 100485 (article ID).
Keywords: Cyanobacteria; MinION-Oxford Nanopore sequencer; Biodiversity; 16S rRNA amplicon sequencing; Long-read sequencing; Coastal waters; Southeast Asia; Monitoring
Strain(s): 22254284321352481 
DOI: 10.1016/j.rsma.2018.100485
Cho, S. J., Sung, Y. J., Lee, J. S., Yu, B. S., Sim, S. J. 2021 Robust cyst germination induction in Haematococcus pluvialis to enhance astaxanthin productivity in a semi-continuous outdoor culture system using power plant flue gas. Bioresour. Technol., 338, 125533 (article ID).
Keywords: Haematococcus pluvialis; Astaxanthin; Cyst germination; Outdoor semi-continuous culture; Power plant flue gas
Strain(s): 144 
PubMed: 34284295
DOI: 10.1016/j.biortech.2021.125533

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