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An alternativemethodtoquantify2-MIB producing cyanobacteriain in drinking water reservoirs: Method development and field applications.
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Molecular mechanisms for Pb removal by Cyanidiales: a potential biomaterial applied in thermo-acidic conditions.
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Morphological characterization and molecular phylogenetic analysis of Dolichospermum hangangense (Nostocales, Cyanobacteria) sp. nov. from Han River, Korea.
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Photoalteration of dissolved organic matter (DOM) released from Microcystis aeruginosa in different growth phases: DOM-fraction distribution and biodegradability.
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Development of large-scale and economic pH control system for outdoor cultivation of microalgae Haematococcus pluvialis using industrial flue.
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Molecular markers from different genomic compartments reveal cryptic diversity within glaucophyte species.
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Morphology, genetic diversity, temperature tolerance and toxicity of Cylindrospermopsis raciborskii (Nostocales, Cyanobacteria) strains from Thailand and Japan.
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Haemagglutinating and antibiotic activities of freshwater microalgae.
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Keywords: Cyanobacteria; MinION-Oxford Nanopore sequencer; Biodiversity; 16S rRNA amplicon sequencing; Long-read sequencing; Coastal waters; Southeast Asia; Monitoring Strain(s): 22, 25, 42, 843, 2135, 2481 DOI: 10.1016/j.rsma.2018.100485 |
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Evaluating the species boundaries of green microalgae (Coccomyxa, Trebouxiophyceae, Chlorophyta) using integrative taxonomy and DNA barcoding with further implications for the species identification in environmental samples.
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de Mendoza, A., Bonnet, A., Vargas-Landin, D. B., Ji, N., Li, H., Yang, F., Li, L., Hori, K., Pflueger, J., Buckberry, S., Ohta, H., Rosic, N., Lesage, P., Lin, S., Lister, R.
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Decelle, J., Romac, S., Stern, R. F., Bendif, E., Zingone, A., Audic, S., Guiry, M. D., Guillou, L., Tessier, D., Le Gall, F., Gourvil, P., Dos Santos, A. L., Probert, I., Vaulot, D., de Vargas, C., Christen, R.
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PhytoREF: a reference database of the plastidial 16S rRNAgene of photosynthetic eukaryotes with curated taxonomy.
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Algal ancestor of land plants was preadapted for symbiosis.
Proc. Natl. Acad. Sci. U. S. A.,
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Linking pangenomes and metagenomes: the Prochlorococcus metapangenome.
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Development of microsatellite markers for the red tide-forming harmful species Chattonella antiqua, C. marina, and C. ovata (Raphidophyceae).
Mol. Ecol. Notes,
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Keywords: Chattonella; harmful algal bloom; microsatellite; phytoplankton; Raphidophyceae; red tide Strain(s): 2 DOI: 10.1111/j.1471-8286.2006.01592.x |
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Genetic structure of Japanese Chattonella marina (Raphidophyceae) populations revealed using microsatellite markers.
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Keywords: Chattonella marina var. antiqua; Chattonella marina var. marina; genetic structure; isolation by distance; microsatellite marker; population genetics Strain(s): 1, 2, 3, 14, 83, 84, 85, 86, 113, 114, 115, 116, 118, 121, 161, 557, 1974, 1975, 1976, 1977, 1978, 1980, 1981, 1982, 1983, 1984, 2383, 2384, 2385, 2386, 2387, 2388, 2389, 2390, 2391, 2392, 2393, 2394, 2395, 2396, 2397, 2398, 2399, 2400, 2401, 2402, 2403, 2404, 2405, 2406, 2407, 2509, 2510, 2511, 2512, 2513, 2514, 2515, 2516, 2517, 2518 DOI: 10.1111/pre.12047 |
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Taxonomic revision of Chattonella antiqua, C. marina and C. ovata (Raphidophyceae) based on their morphological characteristics and genetic diversity.
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Keywords: Chattonella antiqua; Chattonella marina; Chattonella ovata; COI; COX1; Genetic diversity; ITS; Microsatellite; Morphology; Phylogeny; Population; Raphidophyceae; rbcL; Speciation; Taxonomy Strain(s): 1, 2, 3, 5, 6, 9, 10, 14, 83, 84, 85, 113, 114, 116, 118, 146, 161, 293, 557, 561, 603, 671, 716, 849, 1974, 1975, 1976, 1977, 1978, 1980, 1981, 1982, 1983, 1984, 1986, 2383, 2384, 2385, 2386, 2387, 2388, 2389, 2391, 2392, 2393, 2394, 2395, 2396, 2397, 2398, 2399, 2400, 2401, 2402, 2403, 2404, 2405, 2406, 2407 DOI: 10.2216/08-98.1 |
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Monophyly of the genus Closterium and the order Desmidiales (Charophyceae, Chlorophyta) inferred from nuclear small subunit rDNA data.
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Keywords: Charophyceae; Closterium; desmid; molecular phylogeny; placoderm; SSU rDNA; Zygnematales Strain(s): 52, 125, 165, 170, 174, 175, 180, 181, 185, 187, 188, 191, 194, 198, 199, 200, 271, 339, 449 DOI: 10.1046/j.1529-8817.2001.00146.x |
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Closterium moniliferum-ehrenbergii (Charophyceae, Chlorophyta) species complex viewed from the 1506 Group I intron and ITS2 of nuclear rDNA.
J. Phycol.,
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Keywords: biological species; Closterium; group I introns; ITS2; mating group; molecular phylogeny; speciation Strain(s): 172, 173, 174, 182, 183, 228, 229 DOI: 10.1046/j.1529-8817.2003.02145.x |
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Naked Chrysochromulina (Haptophyta) isolates from lake and river ecosystems: An electron microscopic comparison including new observations on the type species of this taxon.
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Quantitative PCR based detection system for cyanobacterial geosmin/2-methylisoborneol (2-MIB) events in drinking water sources: Current status and challenges.
Water Res.,
116478 (article ID).
Keywords: biomolecular; drinking water; database; geo; mic; monitoring; Taq-Man probes Strain(s): 512, 4062, 4063, 4237, 4238 DOI: 10.1016/j.watres.2020.116478 |
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Comparative ecophysiology of the xanthophyll cycle in six marine phytoplanktonic species.
Protist,
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Light requirement for carbonic anhydrase induction in Chlamydomonas reinhardtii.
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Evolution of chloroplast transcript processing in Plasmodium and its chromerid algal relatives.
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Ehara, T., Osafune, T., Hase, E.
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Interactions between the nucleus and cytoplasmic organelles during the cell cycle of Euglena gracilis in synchronized cultures.
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The 4-celled Tetrabaena socialis nuclear genome reveals the essential components for genetic control of cell number at the origin of multicellularity in the volvocine lineage.
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Effects of light on photosynthesis, grazing, and population dynamics of the heterotrophic dinoflagellate Pfiesteria piscicida (Dinophyceae).
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Performance of a microalgal-bacterial consortium system for the treatmentof dairy-derived liquid digestate and biomass production.
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Ferris, P., Olson, B. J., De Hoff, P. L., Douglass, S., Casero, D., Prochnik, S., Geng, S., Rai, R., Grimwood, J., Schmutz, J., Nishii, I., Hamaji, T., Nozaki, H., Pellegrini, M., Umen,J. G.
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Process integration of supercritical carbon dioxide extraction and acid treatment for astaxanthin extraction from a vegetative microalga.
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Potential of Monoraphidium sp. GK12 for energy-saving astazanthin production.
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Molecular, structural and biochemical characterization of a novel recombinant chlorophyllase from cyanobacterium Oscillatoria acuminata PCC 6304.
Microb. Cell. Fact.,
20,
14 (article ID).
Keywords: Chlorophyllase; Oscillatoria acuminata PCC 6304; Biochemical characteristic; Substrate specifcity; Catalytic triad Strain(s): 2108 DOI: 10.1186/s12934-020-01507-w |
Guerriero, G., Sergeant, K., Legay, S., Hausman, J. F., Cauchie, H. M., Ahmad, I., Siddiqui, K. S.
2018
Novel insights from comparative in silico analysis of green microalgal cellulases.
Int. J. Mol. Sci.,
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1782 (article ID).
Keywords: cellulase; glycosyl hydrolase family 9; carbohydrate binding module (CBM); bioinformatics; RT-qPCR Strain(s): 2863 PubMed: 29914107 DOI: 10.3390/ijms19061782 |
Gugger, M., Lyra, C., Henriksen, P., Coute, A., Humbert, J.-F., Sivonen, K.
2002
Phylogenetic comparison of the cyanobacterial genera Anabena and Aphanizomenon.
Int. J. Syst. Evol. Microbiol.,
52,
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Keywords: Anabaena; Aphanizomenon; 16S rDNA; 16S-23S rDNA; RubisCO spacer Strain(s): 81 DOI: 10.1099/00207713-52-5-1867 |
Guidi-Rontani, C., Maheswari, U., Jabbari, K., Bowler, C.
2010
Comparative ecophysiology and genomics of the toxic unicellular alga Fibrocapsa japonica.
New Phytol.,
185,
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Keywords: expressed sequence tags (ESTs); Fibrocapsa japonica; harmful algal blooms; heterokont; phylogeny; raphidophyte; stramenopile; toxicity Strain(s): 462, 560, 605, 1303 DOI: 10.1111/j.1469-8137.2009.03074.x |
Guillou, L.
2011
Characterization of the Parmales: much more than the resolution of a taxonomic enigma.
J. Phycol.,
47,
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Strain(s): 2682, 3369, 3370, 3371 DOI: 10.1111/j.1529-8817.2010.00951.x |
Guillou, L., Chrétiennot-Dinet, M. J., Boulben, S., Moon-van der Staay, S. Y., Vaulot, D.
1999
Symbiomonas scintillans gen. et sp. nov. and Picophagus flagellatus gen. et sp. nov. (Heterokonta): two new heterotrophic flagellates of picoplanktonic size.
Protist,
150,
383-398.
Strain(s): 2586, 2589 DOI: 10.1016/S1434-4610(99)70040-4 |
Guillou, L., Chrétiennot-Dinet, M. J., Medlin, L. K., Claustre, H., Loiseaux-de Goër, S., Vaulot, D.
1999
Bolidomonas: a new genus with two species belonging to a new algal class, the Bolidophyceae (Heterokonta).
J. Phycol.,
35,
368-381.
Keywords: Bolidophyceae; diatoms; Heterokonta; marine picoeukaryotes; oligotrophic ocean; Stramenopiles Strain(s): 2682 DOI: 10.1046/j.1529-8817.1999.3520368.x |
Guillou, L., Jacquet, S., Chrétiennot-Dinet, M. J., Vaulot, D.
2001
Grazing impact of two small heterotrophic flagellates on Prochlorococcus and Synechococcus.
Aquat. Microb. Ecol.,
26,
201-207.
Strain(s): 2586, 2589 DOI: 10.3354/ame026201 |
Guillou, L., Moon-van der Staay, S. Y., Claustre, H., Partensky, F., Vaulot, D.
1999
Diversity and abundance of Bolidophyceae (Heterokonta) in two oceanic regions.
Appl. Environ. Microbiol.,
65,
4528-4536.
Strain(s): 2586, 2589, 2682, 2691 PubMed: 10508085 DOI: 10.1128/AEM.65.10.4528-4536.1999 |
Guionet, A., Hosseini, B., Teissié, J., Akiyama, H., Hosseini, H.
2017
A new mechanism for efficient hydrocarbon electro-extraction from Botryococcus braunii.
Biotechnol. Biofuels,
10,
39 (article ID).
Keywords: Green energy; Biofuel; Hydrocarbon; Extraction; Botryococcus braunii kützing; Nanosecond pulsed electric field (nsPEF) Strain(s): 836 PubMed: 28228843 DOI: 10.1186/s13068-017-0724-1 |
Guionet, A., Oura, K., Akiyama, H., Hosano, H.
2019
The narrow window of energy application for oil extraction by arc discharge.
J. Appl. Phycol.,
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Keywords: Botryococcus braunii; Hydrocarbons; Biofuel; Matrix; Extraction Strain(s): 836 DOI: 10.1007/s10811-018-1579-y |
Guo, B., Lei, C., Ito, T., Jiang, Y., Ozeki, Y., Goda, K.
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High-throughput accurate single-cell screening of Euglena gracilis with fluorescence-assisted optofluidic time-stretch microscopy.
PLoS One,
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Strain(s): 48 PubMed: 27846239 DOI: 10.1371/journal.pone.0166214 |
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2017
High-throughput label-free screening of Euglena gracilis with optofluidic time-stretch quantitative phase microscopy.
Proc. of SPIE,
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Guo, Y., Zang, X., Cao, X., Zhang, F., Sun, D., Shang, M., Li, R., Yangzong, Z., Wei, X., Zhang, X.
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Cloning and expression of Allophycocyanin gene from Gracilariopsis lemaneiformis and studying the binding sites of phycocyanobilin on its α and β subunits.
J. Appl. Phycol.,
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Keywords: Gracilariopsis lemaneiformis; Rhodophyta; Allophycocyanin; Expression; Fluorescence Strain(s): 2104 DOI: 10.1007/s10811-020-02102-7 |
Ha, J. H., Hidaka, T., Tsuno, H.
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Quantification of toxic Microcystis and evolution of its dominance ratio in blooms using real-time PCR.
Environ. Sci. Technol.,
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Strain(s): 102 PubMed: 19245020 DOI: 10.1021/es801265f |
Ha, K., Takamura, N., Jang, M.-H.
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Microcystin production by Microcystis aeruginosa exposed to phytoplanktivorous and omnivorous fish at different kairomone concentrations.
Bull. Environ. Contam. Toxicol.,
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761-765.
Keywords: microcystin; kairomone; Hypophthalmichthys molitrix; Carassius gibelio langsdorfi Strain(s): 89, 103, 107 PubMed: 19669611 DOI: 10.1007/s00128-009-9841-2 |
Hagino, K., Bendif, E. M., Young, J. R. Kogame, K., Probert, I., Takano, Y., Horiguchi, T., de Vardas, C., Okada, H.
2011
New evidence for morphological and genetic variation in the cosmopolitan coccolithophore Emiliania huxleyi (Prymnesiophyceae) from the COX1b-ATP4 genes.
J. Phycol.,
47,
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Keywords: biogeography; coccolithophore; Emiliania huxleyi; mitochondrial DNA; morphotype Strain(s): 837, 838, 1000, 1311, 1312, 1313, 1314 DOI: 10.1111/j.1529-8817.2011.01053.x |
Hagiwara, T., Yagi, O., Takamura, Y., Sudo, R.
1984
Isolation of bacteria-free Microcystis aeruginosa from Lake Kasumigaura.
Jpn. J. Water Poll. Res.,
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Strain(s): 604 |
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Metabolic co-dependence drives the evolutionary ancient Hydra-Chlorella symbiosis.
eLife,
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e35122 (article ID).
Keywords: Chlorella; Hydra; evolutionary biology; genome; nitrogen metabolism; symbiosis Strain(s): 2166, 2235, 2541 PubMed: 29848439 DOI: 10.7554/eLife.35122 |
Hamada, S., Sekimoto, H., Tanabe, Y., Tsuchikane, Y., Ito, M.
2006
Isolation of myosin XI genes from the Closterium peracerosum-strigosum-littorale complex and analysis of their expression during sexual reproduction.
J. Plant Res.,
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Keywords: Closterium; Cytokinesis; Myosin XI; Real-time PCR; Sexual cell division; Sexual reproduction Strain(s): 65, 67, 68 PubMed: 16456621 DOI: 10.1007/s10265-005-0249-8 |
Hamaji, T., Ferris, J. P., Nishii, I., Nishimura, Y., Nozaki, H.
2013
Distribution of the sex-determining geneMID and molecular correspondence of mating types within the isogamous genus Gonium (Volvocales, Chlorophyta).
PLoS One,
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e64385 (article ID).
Strain(s): 652, 653, 654, 655, 851, 852, 1038, 1039, 1708, 1710, 1711, 2455, 2457 PubMed: 23696888 DOI: 10.1371/journal.pone.0064385 |
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Identification of the minus-dominance gene ortholog in the mating-type locus of Gonium pectorale.
Genetics,
178,
283-294.
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2017
Multiple independent changes in mitochondrial genome conformation in chlamydomonadalean algae.
Genome Biol. Evol.,
9,
993-999.
Keywords: Eudorina; linear mitochondrial DNA; telomere; Volvox; Yamagishiella Strain(s): 3982, 3984 DOI: 10.1093/gbe/evx060 |
Hamaji, T., Kawai-Toyooka, H., Uchimura, H., Suzuki, M., Noguchi, H., Minakuchi, Y., Toyoda, A., Fujiyama, A., Miyagishima, S., Umen, J. G., Nozaki, H.
2018
Anisogamy evolved with a reduced sexdetermining region in volvocine green algae.
Communications Biology,
1,
17 (article ID).
Strain(s): 3982, 3983, 3984, 3985, 4018, 4100 DOI: 10.1038/s42003-018-0019-5 |
Hamaji, T., Mogi, Y., Ferris, P. J., Mori, T., Miyagishima, S., Kabeya, Y., Nishimura, Y., Toyoda, A., Noguchi, H., Fujiyama, A., Olson, B. J. S. C., Marriage, T. N., Nishii, I., Umen, J. G. Nozaki, H.
2016
Sequence of the Gonium pectorale mating locus reveals a complex and dynamic history of changes in volvocine algal mating haplotypes.
G3-Genes Genomes Genet.,
6,
1179-1189.
Keywords: Gonium; Chlamydomonas; Volvox; mating locus; evolution; Genetics of Sex Strain(s): 2863 PubMed: 26921294 DOI: 10.1534/g3.115.026229 |
Hamaji, T., Smith, DR., Noguchi, H., Toyoda, A., Suzuki, M., Kawai-Toyooka, H., Fujiyama, A., Nishii, I., Marriage, T., Olson, B. J. S. C., Nozaki, H.
2013
Mitochondrial and plastid genomes of the colonial green alga Gonium pectorale give insights into the origins of organelle DNA architecture within the Volvocales.
PLoS One,
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Strain(s): 2863 PubMed: 23468928 DOI: 10.1371/journal.pone.0057177 |
Hamamoto, Y., Honda, D.
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Nutritional intake of Aplanochytrium (Labyrinthulea, Stramenopiles) from living diatoms revealed by culture experiments suggesting the new prey–predator interactions in the grazing food web of the marine ecosystem.
PLoS One,
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e0208941 (article ID).
Strain(s): 324, 3712 PubMed: 30625142 DOI: 10.1371/journal.pone.0208941 |
Hamana, K.
2008
Cellular polyamines of phototrophs and beterotrophs belonging to the lower eukaryotic phyla Cercozoa, Euglenozoa, Heterokonta and Metamonada.
J. Gen. Appl. Microbiol.,
54,
135-140.
Keywords: cyanobacteria; homospermidine; polyamine; spermine; thermospermine Strain(s): 9, 15, 71, 86, 118, 253, 323, 330, 333, 548, 603, 622, 1002, 1003, 1011, 1044, 1303, 1380, 1440, 1443, 1444 PubMed: 18497488 DOI: 10.2323/jgam.54.135 |
Hamana, K., Aizaki T., Arai, E., Saito, A., Uchikata, K., Ohnishi, H.
2004
Distribution of norspermidine s a cellular polyamine within micro green algae including non-photosynthetic achlorophyllous Polytoma, Polytomella, Prototheca and Helicosporidium.
J. Gen. Appl. Microbiol.,
50,
289-295.
Keywords: Chlorophyta; green alga; Helicosporidium; norspermidine; polyamine; Polytoma; Polytomella; Prototheca Strain(s): 18, 251, 254, 255, 296, 329, 483, 486, 536 |
Hamana, K., Furuchi, T., Hayashi, H., Niitsu, M.
2016
Additional analysis of cyanobacterial polyamines ─ Distributions of spermidine, homospermidine, spermine, and thermospermine within the phylum Cyanobacteria. ─
Microb. Resour. Syst.,
32,
179-186.
Keywords: cyanobacteria; homospermidine; polyamine; thermospermine Strain(s): 2086, 2087, 2134, 2412, 2539, 3373 |
Hamana, K., Furuchi, T., Nakamura, T., Hayashi, H., Niitsu, M.
2017
Occurrence of penta-amines, hexa-amines and N-methylated polyamines in unicellular eukaryotic organisms belonging to the phyla Heterokontophyta and Labyrinthulomycota of the subdomain Stramenopiles.
J. Gen. Appl. Microbiol.,
62,
320-325.
Keywords: Bioaccumulation; clam Corbicula leana; cyanotoxins; elimination; Microcystis Strain(s): 2535 PubMed: 27773915 DOI: 10.2323/jgam.2016.05.001 |
Hamana, K., Kobayashi, M., Furuchi, T., Hayashi, H., Niitsu, M.
2018
Polyamine analysis of unicellular, colonial, and multicellular green algae —Detection of aminobutylcadaverine, N1-aminopentylspermidine, N8-aminopentylspermidine, and penta-amines.—
Microb. Resour. Syst.,
34,
73-82.
Keywords: aminobutylcadaverine; aminopentylspermidine; green alga; penta-amine; polyamine; thermospermine Strain(s): 18, 35, 242, 691, 735, 1271, 1278, 2185, 2187, 2235, 2261, 2540, 2572, 3983 |
Hamana, K., Kobayashi, M., Furuchi, T., Hayashi, H., Niitsu, M.
2018
Polyamine distribution profiles in unicellular and multicellular red algae (phylum Rhodophyta) —Detection of 1,6-diaminohexane, aminobutylcadaverine, canavalmine and aminopropylcanavalmine.—
Microb. Resour. Syst.,
34,
83-91.
Keywords: aminobutylcadaverine; aminopropylcanavalmine; canavalmine; diaminohexane; polyamine; red algae; Rhodophyta Strain(s): 551, 1032, 1572, 1957, 2138, 2140, 2636, 2662, 2742 |
Hamana, K., Kobayashi, M., Yokota, A., Sekiguchi, H., Niitsu, M.
2008
Cellular polyamine profiles in cyanobacteria.
Microbiol. Cult. Coll.,
24,
3-8.
Keywords: cyanobacteria; homospermidine; polyamine; spermine; thermospermine Strain(s): 26, 33, 36, 46, 206, 208, 230, 267, 268, 305, 361, 416, 433, 434, 481, 507, 597, 598, 931, 932, 1031, 2115, 2133, 2135 |
Hamana, K., Matsuzaki, S., Niitsu, M., Samejima, K., Nagashima, H.
1990
Polyamines of unicellular thermoacidophilic red alga Cyanidium caldarium.
Phytochemistry,
29,
377-380.
Keywords: Cyanidium caldarium; Rhodophyta; red algae; polyamines; chemotaxonomy Strain(s): 250, 2137, 3891 DOI: 10.1016/0031-9422(90)85082-Q |
Hamana, K., Miyagawa, K., Matsuzaki, S.
1983
Occurrence of syn-homospermidine as the major polyamine in nitrogen-fixing cyanobacteria.
Biochem. Biophys. Res. Commun.,
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Strain(s): 19, 37, 39, 2129, 3275 PubMed: 6405746 DOI: 10.1016/0006-291X(83)91507-3 |
Hamana, K., Niitsu, M.
2006
Cellular polyamines of lower eukaryotes belonging to the phyla Glaucophyta, Rhodophyta, Cryptophyta, Haptophyta and Percolozoa.
J. Gen. Appl. Microbiol.,
52,
235-240.
Keywords: Cryptophyta; Glaucophyta; Haptophyta; Perclozoa; polyamine; Rhodophyta Strain(s): 8, 274, 276, 277, 282, 353, 388, 699, 706, 715, 741, 763, 764, 1016, 1017, 1032, 1036, 1332, 1441, 1456, 1457, 1462, 1463, 1467, 1473, 3377 PubMed: 17116972 DOI: 10.2323/jgam.52.235 |
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Occurrence of homospermidine and thermospermine as a cellular polyamine in unicellular chlorophyte and multicellular charophyte green algae
J. Gen. Appl. Micobiol.,
59,
313-319.
Keywords: green alga; homospermidine; polyamine; thermospermine Strain(s): 18, 151, 160, 255, 296, 306, 360, 363, 640, 722, 836, 1409, 1410, 1411, 1419, 1837, 2164, 2199, 3374 PubMed: 24005181 DOI: 10.2323/jgam.59.313 |
Hamana, K., Sakamoto, A., Nishina, M., Niitsu, M.
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Cellular polyamine profile of the phyla Dinophyta, Apicomplexa, Ciliophora, Euglenozoa, Cercozoa and Heterokonta.
J. Gen. Appl. Microbiol.,
50,
297-303.
Keywords: Apicomlexa; Cercozoa; Ciliophora; Dinophyta; Euglenozoa; Heterokonta; norspermidine; polyamine Strain(s): 12, 286, 304, 331, 381, 387, 463 PubMed: 15747233 DOI: 10.2323/jgam.50.297 |
Han, J.-I., Yao, J., Lee, C., Park, J., Choi, Y.-E.
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A novel approach to enhance astaxanthin production in Haematococcus lacustris using a microstructure-based culture platform.
Algal Res.,
39,
101464.
Keywords: Haematococcus lacustris; Microfabricated structure; Astaxanthin; ROS; Mechanical stimulation Strain(s): 144 DOI: 10.1016/j.algal.2019.101464 |
Han, S.-I., Chang, S. H., Lee, C., Jeon, M. S., Heo, Y. M., Kim, S.
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Astaxanthin biosynthesis promotion with pH shock in the green microalga, Haematococcus lacustris.
Bioresour. Technol.,
314,
123725 (article ID).
Keywords: Haematococcus lacustris; Astaxanthin; pH shock; Biological change; Mass culture Strain(s): 144 PubMed: 32615445 DOI: 10.1016/j.biortech.2020.123725 |
Hanagata, N., Karube, I., Chihara, M., Silva, P. C.
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Reconsideration of the taxonomy of ellipsoidal species of Chlorella (Trebouxiophyceae, Chlorophyta), with establishment of Watanabea gen. nov.
Phycol. Res.,
46,
221-229.
Keywords: Chlorella saccharophila; ellipsoidal species of Chlorella; pyrenoid-lacking Chlorella-like algae: Watanabea gen. et sp. nov. Strain(s): 2189 DOI: 10.1111/j.1440-1835.1998.tb00117.x |
Hanazato, T.
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Interrelations between Microcystis and Cladocera in the highly eutrophic Lake Kasumigaura, Japan.
Int. Revue ges. Hydrobiol.,
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Keywords: Microcystis; Cladocera; toxicity; food chain; Lake Kasumigaura Strain(s): 44, 298, 299 DOI: 10.1002/iroh.19910760104 |
Handa, S., Nakahara, M., Tsubota, H., Deguchi, H., Nakano, T.
2003
A new aerial alga, Stichococcus ampulliformis sp. nov. (Trebouxiophyceae, Chlorophyta) from Japan.
Phycol. Res.,
51,
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Keywords: aerial algae; molecular phylogeny; Stichococcus ampulliformis sp. nov.; Trebouxiophyceae; 18SrRNA gene Strain(s): 996 DOI: 10.1046/j.1440-1835.2003.00311.x |
Hang, L. T., Mori, K., Tanaka, Y., Morikawa, M., Toyama, T.
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Enhanced lipid productivity of Chlamydomonas reinhardtii with combination of NaCl and CaCl2 stresses.
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Hano, T., Tomaru, Y.
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Metabolomics-based approach to explore growth phase-dependent markers in cultured diatom Chaetoceros tenuissimus.
J. Chromatogr. B,
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121779 (article ID).
Keywords: Diatom; Metabolomics; Gas chromatography mass spectrometry; Liquid chromatography tandem mass spectrometry; Growth phase Strain(s): 3715 PubMed: 31499295 DOI: 10.1016/j.jchromb.2019.121779 |
Hanschen, E. R., Davison, D. R., Ferris, P. J., Michod, R. E.
2018
On the rediscovery of Volvox perglobator (Volvocales, Chlorophyceae) and the evolution of outcrossing from self-fertilization.
Evol. Ecol. Res.,
19,
299-318.
Keywords: homothallism; phylogenetics; reversion; self-fertilization; sexual reproduction; volvocine green algae Strain(s): 289, 421, 456, 458, 460, 474, 522, 541, 543, 544, 545, 564, 566, 568, 569, 571, 572, 574, 578, 582, 653, 732, 751, 851, 856, 872, 876, 877, 878, 880, 882, 1038, 1122, 1140, 1148, 1156, 1157, 1362, 1708, 1711, 1713, 1859, 2457, 2569, 2738, 3382, 3388, 3780, 3782, 3986 |
Hanschen, E. R., Ferris, P. J., Michod, R. E.
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Early evolution of the genetic basis for soma in the Volvocaceae.
Evolution,
68,
2014-2025.
Keywords: Gene duplication; germ-soma differentiation; major transitions; multicellularity; regA; Volvox Strain(s): 2739 PubMed: 4689915 DOI: 10.1111/evo.12416 |
Hanschen, E. R., Herron, M. D., Wiens, J. J., Nozaki, H., Michod, R. E.
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Multicellularity drives the evolution of sexual traits.
Am. Nat.,
192,
E93-E10.
Keywords: sex; volvocine green algae; multicellularity; ancestral state; reconstruction; anisogamy; sexual dimorphism Strain(s): 289, 418, 421, 456, 458, 460, 522, 541, 543, 544, 545, 564, 566, 568, 569, 571, 572, 574, 578, 582, 653, 732, 751, 851, 856, 857, 872, 875, 876, 877, 878, 880, 882, 883, 891, 892, 1038, 1362, 1711, 1713, 2457, 2569, 2738, 3382, 3388, 3780, 3782 PubMed: 30125231 DOI: 10.1086/698301 |
Hanschen, E. R., Herron, M. D., Wiens, J. J., Nozaki, H., Michod, R. E.
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Repeated evolution and reversibilityof self-fertilization in the volvocinegreen algae.
Evolution,
72,
386-398.
Keywords: Haploid; phylogenetics; self-fertilization; sex; sexual reproduction; volvocine green algae Strain(s): 289, 418, 456, 458, 460, 541, 543, 544, 545, 564, 566, 568, 569, 571, 572, 574, 578, 582, 653, 732, 851, 856, 857, 872, 875, 876, 877, 878, 880, 882, 883, 891, 892, 1038, 1362, 1711, 1713, 2457, 2569, 2738, 3382, 3388, 3780, 3782 PubMed: 29134623 DOI: 10.1111/evo.13394 |
Hanschen, E. R., Marriage, T.N., Ferris, P.J., Hamaji, T., Toyoda, A., Fujiyama,A., Neme,R., Noguchi,H., Minakuchi, Y., Suzuki, M., Kawai-Toyooka, H., Smith, D.R., Sparks, H., Anderson, J., Bakaric, R., Luria, V., Karger, A., Kirschner, M.W., Durand, P.M., Michod, R.E., Nozaki, H., Olson, B.J.
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The Gonium pectorale genome demonstrates co-option of cell cycle regulation during the evolution of multicellularity.
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11370 (article ID).
Strain(s): 2863 PubMed: 27102219 DOI: 10.1038/ncomms11370 |
Hara, Y.
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Chattonella ovata Y. Hara et Chihara mss.
In Red Tide Organisms in Japan - An Illustrated Taxonomic Guide, Eds. by Fukuyo, Y., Takano, H., Chihara, M. & Matsuoka, K., Uchida Rokakuho, Tokyo,
pp. 340-341 (in Japanese with English summary).
Strain(s): 603 |
Hara, Y., Chihara, M.
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Ultrastructure and taxonomy of Chattonella (Class Raphidophyceae) in Japan.
Jpn. J. Phycol.,
30,
47-56 (in Japanese with English summary).
Keywords: Chattonella; Chattonella marina comb. nov.; Raphidophyceae; red tides; taxonomy; ultrastructure Strain(s): 161 |
Hara, Y., Doi, K., Chihara, M.
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Four new species of Chattonella (Raphidophyceae, Chromophyta) from Japan.
Jpn. J. Phycol. (Sôrui),
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Keywords: Chattonella; C. globosa; C. minima; C. ovata; C. verruculosa; Raphidophyceae; red tide organisms; taxonomy Strain(s): 118, 161, 603, 670, 849 |
Hara, Y., Inouye, I., Chihara, M.
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Morphology and ultrastructure of Olisthodiscus luteus (Raphidophyceae) with special reference to the taxonomy.
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Hashimoto, H., Murakami, S.
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Assessment of herbicide effects on algal production in the Kokai River (Japan) using a model stream and Selenastrum bioassay.
Ecotoxicology,
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Hatano, S.
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Studies on frost hardiness in Chlorella ellipsoidea: Effects of antimetabolites, surfactants, hormones, and sugars on the hardening process in the light and dark.
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Hatano, S., Akashi, H., Nogata, Y., Yoshimoto, M.
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Preliminary study on the effects of photoperiod and nutrients on the vertical migratory behavior of a red tide flagellate, Heterosigma akashiwo. Jpn.
Jpn. J. Phycol.,
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Keywords: Heterosigma akashiwo; nutrients; photoperiod; vertical migration Strain(s): 6 |
Hatano, S., Joh, T., Miyamoto, T., Yoshimoto, M.
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Preparation of protoplasts from Chlorella ellipsoidea C-27.
Plant Cell Physiol.,
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Keywords: cell wall-lytic enzyme; chitosanase; Chlorella ellipsoidea C-27; protoplast Strain(s): 2170 DOI: 10.1093/oxfordjournals.pcp.a078301 |
Hatano, S., Kabata, K.
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Transition of lipid metabolksm in relation to frost hardiness in Chlorella ellipsoidea.
In Plant Cold Hardiness and Freezing Stress, Eds. by Li, P. H. & Sakai, A., Academic Press, New York,
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Plant Physiol.,
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Hatano, S., Kabata, K., Yoshimoto, M., Sadakane, H.
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Plant Physiol.,
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Studies on frost hardiness in Chlorella ellipsoidea. I. Development of frost hardiness of Chlorella ellipsoidea in cynchronous culture.
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Hatano, S., Sadakane, H., Tutumi, M., Watanabe, T.
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Hattori, A., Fujita, Y.
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Crystalline phycobilin chromoproteids obtained from a blue-green alga, Tolypothrix tenuis.
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Hattori, A., Fujita, Y.
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Formation of phycobilin pigments in a blue-green alga, Tolypothrix tenuis, as induced by illumination with colored lights.
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Hautala, H., Lamminmäki, U., Spoof, L., Nybom, S., Meriluoto, J., Vehniäinen, M.
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Quantitative PCR detection and improved sample preparation of microcystin-producing Anabaena, Microcystis and Planktothrix.
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Microfluid. Nanofluid.,
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Hayama, M., Nakada, T., Hamaji, T., Nozaki, H.
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Morphology, molecular phylogeny and taxonomy of Gonium maiaprilis sp. nov. (Goniaceae, Chlorophyta) from Japan.
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Keywords: Chlorophyceae; Goniaceae; Gonium; Gonium maiaprilis sp. nov.; ITS; molecular phylogeny; morphology; rbcL; reproduction; taxonomy Strain(s): 2455, 2456, 2457, 2458, 2459, 2460, 2461 DOI: 10.2216/PH09-56.1 |
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Optimization of seawater-based triacylglycerol accumulation in a freshwater green alga, Chlorella kessleri, through simultaneous imposition of loweredtemperature and enhanced-light intensity.
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Keywords: Chlorella kessleri; Freshwater green algae; Low temperature; Moderate light; Seawater; Triacylglycerol Strain(s): 2152 DOI: 10.1016/j.algal.2017.10.016 |
Hayashida, G., Schneider, C., Espíndola, L., Arias, D., Riquelme, C., Wulff-Zottele, C., Díaz-Palma, P., Rivas, M.
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Characterization of a Chlorophyta microalga isolated from a microbial mat in Salar de Atacama (northern Chile) as a potential source of compounds for biotechnological applications.
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Hayashi-Ishimaru, Y., Ehara, M., Inagaki, Y., Ohama, T.
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A deviant mitochondrial genetic code in prymnesiophytes (yellow-algae): UGA codon for tryptophan.
Curr. Genet.,
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Hayashi-Ishimaru, Y., Ohama, T., Kawatsu, Y., Nakamura, K., Osawa, S.
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UAG is a sense codon in several chlorophycean mitochondria.
Curr. Genet.,
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Phylogenetic position of the Phacotaceae within the Chlamydophyceae as revealed by analysis of 18S rDNA and rbcL sequences.
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Electrophoretic karyotyping and chromosomal gene mapping of Chlorella.
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Higo, A., Kawashima, T., Borg, M., Zhao, M., López-Vidriero, I., Sakayama, H., Montgomery, S, A., Sekimoto, H., Hackenberg, D., Shimamura, M., Nishiyama, T., Sakakibara, K., Tomita, Y., Togawa, T., Kunimoto, K., Osakabe, A., Suzuki, Y., Yamato, K. T., Ishizaki, K., Nishihama, R., Kohchi, T., Franco-Zorrilla, J. M., Twell, D., Berger, F., Araki, T.
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Transcription factor DUO1 generated by neo-functionalization is associated with evolution of sperm differentiation in plants.
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Endosymbiosis-related changes in ultrastructure and chemical composition of Chlorella variabilis (Archaeplastida, Chlorophyta) cell wall in Paramecium bursaria (Ciliophora, Oligohymenophorea).
Eur. J. Protistol.,
66,
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Keywords: Cell wall; Chlorella variabilis; GlycosaminoglycansParamecium bursaria; Symbiosis Strain(s): 3374 PubMed: 30286318 DOI: 10.1016/j.ejop.2018.09.003 |
Higuchi, S., Sugahara, F., Pascual-Anaya, J., Takagi, W., Oisi, Y., Kuratani, S.
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Inner ear development in cyclostomes and evolution of the vertebrate semicircular canals.
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Identification of antioxidant genes in the ostracod Heterocypris incongruens through de novo transcriptome sequencing.
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Hikihara, R., Yamasaki, Y., Shikata, T., Nakayama, N., Sakamoto, S., Kato, S., Hatate, H., Tanaka, R.
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Analysis of phytosterol, fatty acid, and carotenoid composition of 19 microalgae and 6 bivalve species.
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Hino, S.
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An examination of algal bioassay method for agricultural chemicals and heavy metals in a water environment.
Hokkaido Kankyô Kagaku Kenkyû Sentâ Syohô,
18,
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Strain(s): 228, 229 |
Hirabaru, C., Izumo,A., Fujiwara, S., Tadokoro, Y., Shimonaga, T., Konishi, M., Yoshida, M., Fujita, N., Nakamura, Y., Yoshida, M., Kuroiwa, T., Tsuzuki, M.
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The primitive rhodophyte Cyanidioschyzon merolae contains a semiamylopectin-type, but not an amylose-type, α-glucan.
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Keywords: Amylose; Cyanidioschyzon; Floridean starch; Glycogen; Starch synthase; Semiamylopectin Strain(s): 551 PubMed: 20385610 DOI: 10.1093/pcp/pcq046 |
Hirabayashi, R., Imamura, N.
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Action mechanism of a selective anti-cyanobacterial compound, argimicin A.
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Hirai, A., Nishimura, T., Iwamura, T.
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Synthetic rates of chloroplast and cytoplasmic ribosomal ribonucleic acids during the cell cycle of Chlorella.
Plant Cell Physiol.,
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Keywords: cell cycle; Chlorella; chloroplast rRNA; cytoplasmic rRNA; RNA synthesis; radioisotopic precursor Strain(s): 2170 |
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The evolution of male–female sexual dimorphism predates the gender-based divergence of the mating locus gene MAT3/RB.
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Hiramatsu, K., Ideguchi, T., Yonamine, Y., Lee, S. W., Luo, Y., Hashimoto, K., Ito, T., Hase, M., Park, J.-W., Kasai, Y., Sakuma, S., Hayakawa, T., Arai, F., Hoshino, Y., Goda, K.
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High-throughput label-free molecular fingerprinting flow cytometry.
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Isolation of high molecular weight cellular DNA with a novel granulated hydroxyapatite.
Agric. Biol. Chem.,
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Hirano, H., Takeda, Y., Iwamura, T.
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Unique repetitive sequences of 170 bp in Chlorella.
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γ-linolenic acid production by microalgae.
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A receptor-like kinase, related to cell wall sensor of higher plants, is required for sexual reproduction in the unicellular charophycean alga, Closterium peracerosum-strigosum-littorale complex.
Plant Cell Physiol.,
56,
1456-1462.
Keywords: Cell wall; Charophycean alga; Closterium peracerosum–strigosum–littorale complex; CrRLK1L-1; Receptor-like kinase; Sexual reproduction Strain(s): 67, 68 PubMed: 25941232 DOI: 10.1093/pcp/pcv065 |
Hirano, T., Masho, R., Koizumi, D., Tabata, S., Suzuki, K., Sakabe, M., Nakano, Y., Sato, N., Sudo, R.
2006
Ecotoxicity testing of bioremediation agents for shoreline oil-spill clean up.
Jpn. J. Environ. Toxicol.,
9,
115-131.
Keywords: ecotoxicity; bioremediation; oil-spill; acute toxicity; marine organisms Strain(s): 324 DOI: 10.11403/jset.9.115 |
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Draft genome sequences of four species of Chlamydomonas containing phosphatidylcholine.
GenomeA,
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Hirashima, T., Toyoshima, M., Moriyama, T., Nakamura, Y., Sato, N.
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Characterization of phosphoethanolamine-N-methyltransferases in green algae.
Biochem. Biophys. Res. Commun.,
488,
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Keywords: Green algal evolution; Chlamydomonas; Phosphatidylcholine biosynthesis; Phosphoethanolamine-N-methyltransferase Strain(s): 2202, 2207, 2212, 2235, 2242 PubMed: 2848352 DOI: 10.1016/j.bbrc.2017.05.026 |
Hirashima, T., Toyoshima, M., Moriyama, T., Sato, N.
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Evolution of the phosphatidylcholine biosynthesis pathways in green algae: Combinatorial diversity of methyltransferases.
J. Mol. Evol.,
86,
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Keywords: Chlamydomonas; Metabolic diversity; Phosphatidylcholine biosynthesis; Phosphoethanolamine-N-methyltransferase; Phospholipid-N-methyltransferase Strain(s): 2202, 2207, 2212, 2242 PubMed: 29330556 DOI: 10.1007/s00239-017-9826-4 |
Hirata, K., Phunchindawan, M., Tukamoto, J., Goda, S., Miyamoto, K.
1996
Cryopreservation of microalgae using encapsulation-dehydration.
CryoLetters,
17,
321-328.
Keywords: Dunaliella tertiolecta; microalgae; cryopreservation; encapsulation-dehydration Strain(s): 8, 19, 22, 24, 27, 32, 44, 242, 375, 396, 422, 437 |
Hirato, Y., Goto, M., Tokuhisa, M., Tanigawa, M., Nishimura, K.
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Crystallization and X-ray analysis of D-threonine aldolase from Chlamydomonas reinhardtii.
Acta Crystallogr. F-Struct. Biol.,
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Keywords: D-threonine aldolase; Chlamydomonas reinhardtii; D-amino acids; crystallization Strain(s): 2237 PubMed: 28177318 DOI: 10.1107/S2053230X1602063X |
Hirato, Y., Tokuhisa, M., Tanigawa, M., Ashida, H., Tanaka, H., Nishimura, K.
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Cloning and characterization of d-threonine aldolase from the green alga Chlamydomonas reinhardtii.
Phytochemistry,
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Keywords: Chlamydomonas reinhardtii; Chlamydomonadaceae; Green alga; Enzyme characterization; d-Amino acid; d-Threonine aldolase; Pyridoxal 5’-phosphate Strain(s): 2237 PubMed: 28038776 DOI: 10.1016/j.phytochem.2016.12.012 |
Hiroishi, S., Nakai, R., Seto, H., Yoshida, T., Imai, I.
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Identification of Heterocapsa circularisquama by means of antibody.
Fish. Sci.,
68, Suppl.,
627-628.
Keywords: identification; Heterocapsa; dinoflagellate; antibody Strain(s): 7, 235, 472, 473 DOI: 10.2331/fishsci.68.sup1_627 |
Hiroishi, S., Uchida, A., Nagasaki, K., Ishida, Y.
1988
A new method for identification of inter- and intra-species of the red tide algae Chattonella antiqua and Chattonella marina (Raphidophyceae) by means of monoclonal antibodies.
J. Phycol.,
24,
442-444.
Keywords: Chattonella; identification; immunofluorescence; inter-species; intra-species; method; monoclonal antibody; red tide Strain(s): 1, 2, 14, 83, 84, 85, 86, 113, 114, 115, 116, 118, 121 DOI: 10.1111/j.1529-8817.1988.tb04488.x |
Hiroishi, S., Uchida, A., Nagasaki, K., Ishida, Y.
1989
A new method for inter- and intra-species identification of red tide algae Chattonella antiqua and Chattonella marina by means of monoclonal antibodies.
In Red Tides: Biology, Environmental Science, and Toxicology, Eds. by Okaichi, T., Anderson, D. M. & Nemoto, T., Elsevier Science Pub., New York,
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Strain(s): 85, 86, 118, 121 |
Hirokawa, T., Hata, M., Takeda, H.
1982
Correlation between the starch level and the rate of starch synthesis during the developmental cycle of Chlorella ellipsoidea.
Plant Cell Physiol.,
23,
813-820.
Keywords: 14C-fixation; cell cycle; Chlorella ellipsoidea; photosynthesis; starch accumulation; starch synthesis; synchronous culture Strain(s): 2170 |
Hirokawa, T., Miyachi, S., Tamiya, H.
1958
Effect of hydrogen peroxide on the light-induced capacity of carbon dioxide-fixation in green algae.
J. Biochem.,
45,
1005-1010.
Strain(s): 2170 |
Hirokawa, T., Takeda, H.
1980
Automatic analysing system for the liquid chromatography.
J. Gen. Edu. Dept., Niigata Univ.,
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97-106.
Strain(s): 226, 2170 |
Hiroki, M., Shimizu, A., Li, R., Watanabe, M., Watanabe, M. M.
1998
Development of a database system useful for identification of Anabaena spp. (Cyanobacteria).
Phycol. Res.,
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Keywords: Anabaena; computer; cyanobacteria; database system; identification; morphology Strain(s): 810, 819, 826, 835 DOI: 10.1111/j.1440-1835.1998.tb00276.x |
Hirooka, S., Hirose, Y., Kanesaki, Y., Higuchi, S., Fujiwara, T., Onuma, R., Era, A., Ohbayashi, R., Uzuka, A., Nozaki, H., Yoshikawa, H., Miyagishima, SY.
2017
Acidophilic green algal genome provides insights into adaptation to an acidic environment.
Proc. Natl. Acad. Sci. U. S. A.,
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Keywords: acidic environment; acidophilic alga; comparative genomics; comparative transcriptomics; environmental adaptation Strain(s): 2499 PubMed: 28893987 DOI: 10.1073/pnas.1707072114 |
Hirooka, S., Tomita, R., Fujiwara, T., Ohnuma, M., Kuroiwa, H., Kuroiwa, T., Miyagishima, S.
2020
Efficient open cultivation of cyanidialean red algae in acidified seawater.
Sci Rep,
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Nakanishi, A., Iritani, K., Sakihama, Y., Watanabe, M., Mochiduki, A., Tsuruta, A., Sakamoto, S., Ota, A.
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Fabrication and biodegradability of starch cell-plastics as recyclable resources.
Appl. Sci.-Basel,
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847 (article ID).
Keywords: cell-plastics; biodegradability; unicellular green alga; green plastics Strain(s): 2235 DOI: 10.3390/app11020847 |
Hirooka, T., Akiyama, Y., Tsuji, N., Nakamura, T., Nagase, H., Hirata, K., Miyamoto, K.
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Removal of hazardous phenols by microalgae under photoautotrophic conditions.
J. Biosci. Bioeng.,
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Keywords: green algae; cyanobacteria; nitrophenol; chlorophenol; bisphenol A; photoautotrophic conditions Strain(s): 19, 23, 44, 422, 437 PubMed: 16233393 DOI: 10.1016/S1389-1723(03)80130-5 |
Hirosawa, T.
1984
Near-UV and blue light effects in cyanobacteria.
In Blue Light Effects in Biological Systems, Ed. by Senger, H., Springer-Verlag, Berlin,
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Strain(s): 19, 37, 2093, 3277 |
Hirose, M., Reimer, J. D., Hidaka, M., Suda, S.
2008
Phylogenetic analyses of potentially free-living Symbiodinium spp. Isolated from coral reef sand in Okinawa, Japan.
Mar. Biol.,
155,
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Strain(s): 2638, 2639, 2640, 2641, 2642, 2643 DOI: 10.1007/s00227-008-1011-2 |
Hirose, Y., Fujisawa, T., Ohtsubo, Y., Katayama, M., Misawa, N., Wakazuki, S., Shimura, Y., Nakamura, Y., Kawachi, M., Yoshikawa, H., Eki, T., Kanesaki, Y.
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Complete genome sequence of cyanobacterium Fischerella sp. NIES-3754, providing thermoresistant optogenetic tools.
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Keywords: Cyanobacteria; Genome; Photosensor; Thermophile Strain(s): 3754 PubMed: 26784989 DOI: 10.1016/j.jbiotec.2016.01.011 |
Hirose, Y., Fujisawa, T., Ohtsubo, Y., Katayama, M., Misawa, N., Wakazuki, S., Shimura, Y., Nakamura, Y., Kawachi, M., Yoshikawa, H., Eki, T., Kanesaki, Y.
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Complete genome sequence of cyanobacterium Leptolyngbya sp. NIES-3755.
GenomeA,
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Hirose, Y., Fujisawa, T., Ohtsubo, Y., Katayama, M., Misawa, N., Wakazuki, S., Shimura, Y., Nakamura, Y., Kawachi, M., Yoshikawa, H., Eki, T., Kanesaki, Y.
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Complete genome sequence of cyanobacterium Nostoc sp. NIES-3756, a potentially useful strain for phytochrome-based bioengineering.
J. Biotechnol.,
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Strain(s): 3756 PubMed: 26656223 DOI: 10.1016/j.jbiotec.2015.12.002 |
Hirose, Y., Katayama, M., Ohtsubo, Y., Misawa, N., Iioka, E., Suda, W., Oshima, K., Hanaoka, M., Tanaka, K., Eki, T., Ikeuchi, M., Kikuchi, Y., Ishida, M., Hattori, M.
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Complete genome sequence of cyanobacterium Geminocystis sp. strain NIES-3708, which performs type II complementary chromatic acclimation.
GenomeA,
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e00357-15 (article ID).
Strain(s): 3708 PubMed: 25953174 DOI: 10.1128/genomeA.00357-15 |
Hirose, Y., Katayama, M., Ohtsubo, Y., Misawa, N., Iioka, E., Suda, W., Oshima, K., Hanaoka, M., Tanaka, K., Eki, T., Ikeuchi, M., Kikuchi, Y., Ishida, M., Hattori, M.
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Complete genome sequence of cyanobacterium Geminocystis sp. strain NIES-3709, which harbors a phycoerythrin-rich phycobilisome.
GenomeA,
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Strain(s): 3709 PubMed: 25931605 DOI: 10.1128/genomeA.00385-15 |
Hirose, Y., Misawa, N., Yonekawa, C., Nagao, N., Watanabe, M., Ikeuchi, M., Eki, T.
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Characterization of the genuine type 2 chromatic acclimation in the two Geminocystis cyanobacteria.
DNA Res.,
24,
387-396.
Keywords: Cyanobacteria; chromatic acclimation; phycobilisome; cyanobacteriochrome Strain(s): 3708, 3709 PubMed: 28338901 DOI: 10.1093/dnares/dsx011 |
Hiwatari, T., Kasai, F., Watanabe, M. M., Nei, T.
1984
Cryopreservation of Scenedesmus acutus and Pediastrum duplex in liquid nitrogen - Survival and growth after freezing.
Jpn. J. Freez. Dry.,
30,
27-31 (in Japanese with English title).
Strain(s): 95, 213 |
Hodoki, Y., Ohbayashi, K., Kobayashi, Y., Okuda, N., Nakano, S.
2012
Detection and identification of potentially toxic cyanobacteria: Ubiquitous distribution of Microcystis aeruginosa and Cuspidothrix issatschenkoi in Japanese lakes.
Harmful Algae,
16,
49-57.
Keywords: Anatoxin-a; Automated rRNA intergenic spacer analysis (ARISA); Cuspidothrix issatschenkoi; Cyanotoxin; Microcystin; Microcystis aeruginosa Strain(s): 30, 40, 77, 102, 111, 230, 512, 843, 905, 928, 932, 937, 991, 1645, 1669, 1698, 1729, 1950, 2116 DOI: 10.1016/j.hal.2012.01.003 |
Hodoki, Y., Ohbayashi, K., Kobayashi, Y., Okuda, N., Nakano, S.-I.
2011
Temporal variation in cyanobacteria species composition and photosynthetic activity in experimentally induced blooms.
J. Plankton Res.,
33,
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Keywords: cyanobacterial bloom; DCMU [3'-(3,4-dichlorophenyl)-1',1'-dimethyl urea]; maximum quantum yieldMicrocystis aeruginosa Strain(s): 843 DOI: 10.1093/plankt/fbr040 |
Hoef-Emden, K.
2012
Pitfalls of establishing DNA barcoding systems in protists: the cryptophyceae as a test case.
PLoS One,
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Strain(s): 274, 706, 708, 711, 712, 713, 714, 1004, 1370 PubMed: 22970104 DOI: 10.1371/journal.pone.0043652 |
Hoef-Emden, K.
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Osmotolerance in the Cryptophyceae: Jacks-of-all-trades in the Chroomonas clade.
Protist,
165,
123-143.
Keywords: Chroomonas; contractile vacuole; cryptomonads; floridoside; osmolarity; osmoregulation; osmotolerance; phylogeny Strain(s): 708, 712, 713, 714, 1004 PubMed: 24568876 DOI: 10.1016/j.protis.2014.01.001 |
Hoef-Emden, K., Melkonian, M.
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Revision of the genus Cryptomonas (Cryptophyceae): a combination of molecular phylogeny and morphology provides insights into a long-hidden dimorphism.
Protist,
154,
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Strain(s): 274, 276, 279 PubMed: 14658496 DOI: 10.1078/143446103322454130 |
Hogetsu, D., Miyachi, S.
1970
Effect of oxygen on the light-enhanced dark carbon dioxide fixation in Chlorella cells.
Plant Physiol.,
45,
178-182.
Strain(s): 2170 PubMed: 16657299 DOI: 10.1104/pp.45.2.178 |
Hogetsu, D., Miyachi, S.
1977
Effects of CO2 concentration during growth on subsequent photosynthetic CO2 fixation.
Plant Cell Physiol.,
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347-352.
Strain(s): 2160 |
Hogetsu, D., Miyachi, S.
1979
Role of carbonic anhydrase in photosynthetic CO2 fixation in Chlorella.
Plant Cell Physiol.,
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747-756.
Keywords: carbonic anhydrase; Chlorella; CO2 fixation; photosynthesis; ribulose 1,5-bisphosphate carboxylase Strain(s): 2160 |
Honda, D., Yokota, A., Sugiyama, J.
1999
Detection of seven major evolutionary lineages in cyanobacteria based on the 16S rRNA gene sequence analysis with new sequences of five marine Synechococcus strains.
J. Mol. Evol.,
48,
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Keywords: cyanobacteria; Synechococcus; phylogeny; ribosomal RNA; maximum-likelihood method; neighbor-joining method; rate homo- and heterogeneous models Strain(s): 27, 208, 510, 2116, 2118, 2119 PubMed: 10229577 DOI: 10.1007/PL00006517 |
Honda, R., Boonnorat, J., Chiemchaisri, C., Chiemchaisri, w., Yamamoto, K.
2012
Carbon dioxide capture and nutrients removal utilizing treated sewage by concentrated microalgae cultivation in a membrane photobioreactor.
Bioresour. Technol.,
125,
59-64.
Keywords: Carbon dioxide capture; Nutrients removal; Membrane photobioreactor; Microalgae; Botryococcus braunii Strain(s): 2199 PubMed: 23023237 DOI: 10.1016/j.biortech.2012.08.138 |
Honda, R., Rukapan, W., Komura, H., Teraoka, Y., Noguchi, M., Hoek, E.M.V.
2015
Effects of membrane orientation on fouling characteristics of forward osmosis membrane in concentration of microalgae culture.
Bioresour. Technol.,
197,
429-433.
Keywords: Forward osmosis; Microalgae; Membrane fouling; Extracellular polymeric substances (EPS) Strain(s): 2170 PubMed: 26356114 DOI: 10.1016/j.biortech.2015.08.096 |
Honda, R., Teraokab, Y., Noguchia, M., Yang, S.
2017
Optimization of hydraulic retention time and biomass concentration in microalgae biomass production from treated sewage with a membrane photobioreactor.
J. Water Environ. Technol.,
15,
1-11.
Keywords: membrane photobioreactor; microalgae; resource recovery from wastewater Strain(s): 2170 DOI: 10.2965/jwet.15-085 |
Yoshida, T., Takashima, Y., Tomaru Y., Shirai, Y., Takao, Y., Hiroishi, S., Nagasaki, K.
2012
A protein binding to an upstream sequence of ftsZ involved in coordination of DNA replication and cell division in Microcystis aeruginosa.
Fish. Sci.,
78,
375-379.
Keywords: Cyanobacteria; Microcystis; Cell division; DNA replication; ftsZ Strain(s): 298 DOI: 10.1007/s12562-011-0442-8 |
Hong, J. W., Kim, O. H., Jo, S. W., Kim, H., Jeong, M. R., Yoon, H. S.
2018
Characterization of alkane-producing Nostoc sp. isolated from a summer bloom for biofuel potential.
J. Biobased Mater. Bioenergy,
12,
244-251.
Keywords: Alkane-Producing Genes; Biofuel; Cyanobacteria; Heptadecane; Potential; Feedstoc Strain(s): 21, 2109 DOI: 10.1166/jbmb.2018.1757 |
Hong, M. E., Choi, S. P., Park, Y. I., Kim, Y. K., Chang, W. S., Kim, B. W., Sim, S. J.
2012
Astaxanthin production by a highly photosensitive Haematococcus mutant.
Process Biochem.,
47,
1972–1979.
Keywords: Haematococcus pluvialis; Astaxanthin; Photo-inducible mutant; Photo-sensitivity Strain(s): 144 DOI: 10.1016/j.procbio.2012.07.007 |
Hong, M. E.1, Choi, H. I., Kwak, H. S., Hwang, S. W., Sung, Y. J., Chang, W. S., Sim, S. J.
2018
Rapid selection of astaxanthin-hyperproducing Haematococcus mutant via azide-based colorimetric assay combined with oil-based astaxanthin extraction.
Bioresour. Technol.,
267,
175-181.
Keywords: Haematococcus pluvialis; Autotrophic astaxanthin production; High-throughput screening; Azide-based colorimetric assay; Oil-based astaxanthin extraction method Strain(s): 144 PubMed: 30014996 DOI: 10.1016/j.biortech.2018.07.033 |
Hong, M.-E., Choi, Y. Y., Sim, S. J.
2016
Effect of red cyst cell inoculation and iron (II) supplementation on autotrophic astaxanthin production by Haematococcus pluvialis under outdoor summer conditions.
J. Biotechnol.,
218,
25–33.
Keywords: Haematococcus pluvialis; Photoautotrophic culture; Astaxanthin; Summer outdoor conditions; Red cyst cell (aplanospore) inoculation method; Iron(Fe2+) supplementation method Strain(s): 144 PubMed: 26630998 DOI: 10.1016/j.jbiotec.2015.11.019 |
Honjo, M., Matsui, K., Ueki, M., Nakamura, R., Fuhrman, J. A., Kawabata, Z.
2006
Diversity of virus-like agents killing Microcystis aeruginosa in a hyper-eutrophic pond.
J. Plankton Res.,
28,
407-412.
Strain(s): 298 DOI: 10.1093/plankt/fbi128 |
Hoppenrath, M., Yubuki, N., Stern, R., Leander, B. S.
2017
Ultrastructure and molecular phylogenetic position of a new marine sand-dwellin dinoflagellate from British Columbia, Canada: Pseudadenoides polypyrenoides sp. nov. (Dinophyceae).
Eur. J. Phycol.,
52,
208-224.
Keywords: Benthic; morphology; phylogeny; Pseudadenoides kofoidii; taxonomy; ultrastructure Strain(s): 1367 DOI: 10.1080/09670262.2016.1274788 |
Hori, K. Maruyama, F., Fujisawa, T., Togashi, T., Yamamoto, N., Seo, M., Sato, S., Yamada, T., Mori, H., Tajima, N., Moriyama, T., Ikeuchi, M., Watanabe, M., Wada, H., Kobayashi, K., Saito, M., Masuda, T., Sasaki-Sekimoto, Y., Mashiguchi, K., Awai, K., Shimojima, M., Masuda, S., Iwai, M., Nobusawa, T., Narise, T., Kondo, S., Saito, H., Sato, R., Murakawa, M., Ihara, Y., Oshima-Yamada, Y., Ohtaka, K., Satoh, M., Sonobe, K., Ishii, M., Ohtani, R., Kanamori-Sato, M., Honoki, R., Miyazaki, D., Mochizuki, H., Umetsu, J., Higashi, K., Shibata, D., Kamiya, Y., Sato, N., Nakamura, Y., Tabata, S., Ida, S., Kurokawa, K., Ohta, H.
2014
Klebsormidium flaccidum genome reveals primary factors for plant terrestrial adaptation.
Nat. Commun.,
5,
3978 (article ID).
Strain(s): 2285 PubMed: 24865297 DOI: 10.1038/ncomms4978 |
Hori, S., Sekimoto, H., Abe, J.
2012
Properties of cell surface carbohydrates in sexual reproduction of the Closterium peracerosum–strigosum–littorale complex (Zygnematophyceae, Charophyta).
Phycol. Res.,
60,
254-260.
Keywords: cell-cell recognition; Closterium; ConcanavalinA; conjugation; lectin; Lycopersicon esculentum lectin; sexual reproduction Strain(s): 67, 68 DOI: 10.1111/j.1440-1835.2012.00656.x |
Horiguchi, T.
1996
Haramonas dimorpha gen. et sp. nov. (Raphidophyceae), a new marine raphidophyte from Australian mangrove.
Phycol. Res.,
44,
143-150.
Keywords: Haramonas dimorpha gen et sp. nov.; mangrove; Raphidophyceae; taxonomy; tubular invagination; ultrastructure Strain(s): 716 DOI: 10.1111/j.1440-1835.1996.tb00043.x |
Hoshina, R., Fujiwara, Y.
2013
Molecular characterization of Chlorella cultures of the National Institute for Environmental Studies culture collection with description of Micractinium inermum sp. nov., Didymogenes sphaerica sp. nov., Didymogenes soliella sp. nov., (Chlorellaceae, Trebouxiophyceae).
Phycol. Res.,
61,
124-132.
Keywords: Chlorella; Didymogenes; group 1 intron; internal transcribed spacer 2; Micractinium; species concept Strain(s): 2167, 2171, 2173, 2330 DOI: 10.1111/pre.12010 |
Hoshina, R., Hayakawa, M. M., Kobayashi, M., Higuchi, R., Suzaki, T.
2020
Pediludiella daitoensis gen. et sp. nov. (Scenedesmaceae, Chlorophyceae), a large coccoid green alga isolated from a Loxodes ciliate.
Sci Rep,
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628 (article ID).
Strain(s): 4031 PubMed: 31959793 DOI: 10.1038/s41598-020-57423-x |
Hoshina, R., Imamura, N.
2008
Eu-Chlorella large subunit rDNA sequences and group I introns in ribosomal DNA of the paramecian symbiotic alga NC64A.
Phycol. Res.,
56,
21-32.
Keywords: Chlorella vulgaris; group I intron; intron phylogeny; intron transposition; large subunit ribosomal DNA; NC64A Strain(s): 227 DOI: 10.1111/j.1440-1835.2008.00481.x |
Hoshina, R., Imamura, N.
2009
Phylogenetically close group I introns with different positions among Paramecium bursaria photobionts imply a primitive stage of intron diversification.
Mol. Biol. Evol.,
26,
1309-1319.
Keywords: degenerative homing; intron diversification; intron transposition; Paramecium bursaria symbiotic algae; reverse splicing Strain(s): 2541 PubMed: 19279084 DOI: 10.1093/molbev/msp044 |
Hoshina, R., Iwataki, M., Imamura, N.
2010
Chlorella variabilis and Micractinium reisseri sp. nov. (Chlorellaceae, Trebouxiophyceae): Redescription of the endosymbiotic green algae of Paramecium bursaria (Peniculia, Oligohymenophorea) in the 120th year.
Phycol. Res.,
58,
188-201.
Keywords: Chlorella variabilis; ITS2; Micractinium reisseri; Paramecium bursaria; species concept Strain(s): 2540, 2542 DOI: 10.1111/j.1440-1835.2010.00579.x |
Hoshina, R., Kamako, S.-I., Imamura, N.
2004
Phylogenetic position of endosymbiotic green algae in Paramecium bursaria Ehrenberg from Japan.
Plant Biol.,
6,
447-453.
Keywords: 18S rDNA; Chlorella; endosymbiont; ITS; Paramecium bursaria; phylogeny Strain(s): 2540, 2541 DOI: 10.1055/s-2004-820888 |
Hoshina, R., Kato, Y., Kamako, S., Imamura, N.
2005
Genetic evidence of "American" and "European" type symbiotic algae of Paramecium bursaria Ehrenberg.
Plant Biol.,
7,
526-532.
Keywords: 18S rDNA; "American"; "European"; Chlorella; ITS; Paramecium bursaria; Phylogeny Strain(s): 2540, 2541 DOI: 10.1055/s-2005-865912 |
Hoshina, R., Kobayashi, M., Suzaki, T., Kusuoka, Y.
2018
Brandtia ciliaticola gen. et sp. nov. (Chlorellaceae, Trebouxiophyceae) a common symbiotic green coccoid of various ciliate species.
Phycol. Res.,
66,
76-81.
Keywords: Chlorella; genus definition; rRNA structure Strain(s): 4032, 4033, 4034 DOI: 10.1111/pre.12194 |
Hosoi-Tanabe, S., Honda, D., Fukaya, S., Otake, I., Inagaki, Y., Sako, Y.
2007
Proposal of Pseudochattonella verruculosa gen. nov., comb. nov. (Dictyochophyceae) for a formar rephidophycean alga Chattonella verruculosa, based on 18S rDNA phylogeny and ultrastructural characteristics.
Phycol. Res.,
55,
185-192.
Keywords: Chatonella verruculosa; Dictyochophyceae; flagellar apparatus; harmful algal bloom; phylogenetic analysis; Pseudochattonella verruculosa; Raphidophyceae Strain(s): 670 DOI: 10.1111/j.1440-1835.2007.00461.x |
Hosoi-Tanabe, S., Otake, I., Sako, Y.
2006
Phylogenetic analysis of noxious red tide flagellates Chattonella antiqua, C. marina, C. ovata, and C. verruculosa (Raphidophyceae) based on the rRNA gene family.
Fish. Sci.,
72,
1200-1208.
Keywords: Chattonella; genetic homogeneity; phylogenetic analysis; Raphidophyceae; rRNA gene family Strain(s): 1, 5, 86, 121, 558, 559, 603, 670 DOI: 10.1111/j.1444-2906.2006.01277.x |
Hosoi-Tanabe, S., Sako, Y.
2005
Species-specific detection and quantification of toxic marine Dinoflagellates Alexandrium tamarense and A. catenella by reai-time PCR assay.
Mar. Biotechnol.,
7,
506-514.
Keywords: toxic dinoflagellate; — Alexandrium; paralytic shellfish poisoning (PSP); real-time PCR; species-specific identification; quantification Strain(s): 1, 7, 12, 293, 331, 559, 603, 670 PubMed: 16007374 DOI: 10.1007/s10126-004-4128-4 |
Hosokawa, Y., Miki-Noumura, T.
1987
Bending motion of Chlamydomonas axonemes after extrusion of central-pair microtubules.
J. Cell Biol.,
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Studies on the effects of sediments on algal growth - Algal growth potential of sediments.
Res. Rep. Natl. Inst. Environ. Stud.,
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115-121 (in Japanese with English summary).
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Hosoya, R., Hamana, K., Isobe, M., Yokota, A.
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Polyamine distribution profiles within Cyanobacteria.
Microbiol. Cult. Coll.,
21,
3-8.
Keywords: cyanobacteria; homospermidine; polyamine; spermidine Strain(s): 19, 21, 22, 28, 30, 34, 37, 41, 44, 45, 50, 73, 78, 79, 80, 81, 204, 208, 510, 512, 515, 592, 593, 610, 843, 846, 847, 2093, 2096, 2098, 2100, 2102, 2107, 2108, 2118, 2119, 2123, 2124, 2125, 2126, 2128, 2129, 2131, 2132, 3259, 3275, 3276, 3277 |
Houdai, T., Matsuoka, S., Matsumori, N., Murata, M.
2004
Membrane-permeabilizing activities of amphidinol 3, polyene-polyhydroxy antifungal from a marine dinoflagellate.
Biochem. Biophys. Acta,
1667,
91-100.
Keywords: amphidinol; Amphidinium klebsii; amphotericin B Strain(s): 613 PubMed: 15533309 DOI: 10.1016/j.bbamem.2004.09.002 |
Houdai, T., Matsuoka, S., Morsy, N., Matsumori, N., Satake, M., Murata, M.
2005
Hairpin conformation of amphidinols possibly accounting for potent membrane permeabilizing activities.
Tetrahedron,
61,
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Keywords: amphidinol membrane-permeabilizaion Strain(s): 613 DOI: 10.1016/j.tet.2005.01.069 |
Houdai, T., Matsuoka, S., Murata, M., Satake, M., Ota, S., Oshima, Y., Rhodes, L. L.
2001
Acetate labeling patterns of dinoflagellate polyketides, amphidinols 2, 3 and 4.
Tetrahedron,
57,
5551-5555.
Keywords: dinoflagellate; polyketides; biosynthesis; amphidinol; Amphidinium; isotopic labelling Strain(s): 613 DOI: 10.1016/S0040-4020(01)00481-1 |
Houndan, A., Billard, C., Marie, D., Not, F., Sáez, A. G., Young, J. R., Probert, I.
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Holococcolithophore-heterococcolithophore (Haptophyta) life cycles: flow cytometric analysis of relative ploidy levels.
Systematics and Biodiversity,
4,
453-465.
Keywords: Coccolithophore; haplo-diploid; Haptophyta; heterococcolith; holococcolith; life cycle; microalgae; ploidy Strain(s): 2694, 2697 DOI: 10.1017/S1477200003001270 |
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Chrysochromulina: Genomic assessment and taxonomic diagnosis of the type species for an oleaginous algal clade.
Algal Res.,
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Keywords: Haptophyta; Chrysochromulina genome; nad evolution; FtsZ phylogeny; Meiosis; Taxon diagnosis Strain(s): 562 DOI: 10.1016/j.algal.2018.11.023 |
Howe, A. T., Bass, D., Vickerman, K., Chao, E. E., Cavalier-Smith, T.
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Phylogeny, taxonomy, and astounding genetic diversity of Glissomonadida ord. nov., the dominant gliding zooflagellates in soil (Protozoa: Cercozoa).
Protist,
160,
159-189.
Keywords: Glissomonadida; Sandonidae; Allapsidae; Bodomorphidae; Heteromita; phylogeny Strain(s): 2414, 2415, 2417, 2418, 2419, 2421, 2422, 2423, 2424, 2425, 2426, 2427, 2428, 2429, 2430 PubMed: 19324594 DOI: 10.1016/j.protis.2008.11.007 |
Htet, AN., Noguchi, M., Ninomiya, K., Tsuge, Y., Kuroda, K., Kajita, S., Masai, E., Katayama, Y., Shikinaka, K., Otsuka, Y., Nakamura, M., Honda, R., Takahashi, K.
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Application of microalgae hydrolysate as a fermentation medium for microbial production of 2-pyrone 4,6-dicarboxylic acid.
J. Biosci. Bioeng.,
125,
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Hu, ZY., Li, YT., Sommerfeld, M., Chen, F., Hu, Q.
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Enhanced protection against oxidative stress in an astaxanthin-overproduction Haematococcus mutant (Chlorophyceae).
Eur. J. Phycol.,
43,
365-376.
Keywords: astaxanthin; carotenogenesis; flow cytometry; Haematococcus pluvialis; oxidative stress; pigment mutant Strain(s): 144 DOI: 10.1080/09670260802227736 |
Hua, C., Ludsinb, S. A., Martinc, J. F., Dittmannd, E., Lee, J.
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Mycosporine-like amino acids (MAAs)—producing Microcystis in Lake Erie:Development of a qPCR assay and insight into its ecology.
Harmful Algae,
77,
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Keywords: Shinorine; Porphyra; UV irradiation; Sunscreen; Eutrophication; Harmful algal bloom Strain(s): 843 PubMed: 30005796 DOI: 10.1016/j.hal.2018.05.010 |
Hua, J., Lee, R.W.
2012
Factors affecting codon bias in the mitochondrial genomes of the Streptophyte Mesostigma viride and the Chlorophyte Chlamydomonas reinhardtii.
J. Eucaryot. Microbiol.,
59,
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Keywords: Green algae; mutation; selection; synonymous codon usage Strain(s): 296 PubMed: 22340021 DOI: 10.1111/j.1550-7408.2011.00613.x |
Hua, JM., Smith, D. R., Borza, T., Lee, R. W.
2012
Similar relative mutation rates in the three genetic compartments of Mesostigma and Chlamydomonas.
Protist,
163,
105-115.
Keywords: Chlamydomonas; genome architecture; Mesostigma; mutation rate; silent substitution rate Strain(s): 296, 476 PubMed: 21621456 DOI: 10.1016/j.protis.2011.04.003 |
Huang, Y., Lee, H., Lai, C.
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Engineering of the growth environment of microalgae with high biomass and lipid productivity.
J. Nanosci. Nanotechnol.,
13,
2117-2121.
Keywords: Microalgae; Cultivation Environment; Carbon Dioxide; Biomass Productivity; Lipid Productivity Strain(s): 2199 DOI: 10.1166/jnn.2013.6877 |
Huang, Y.-T., Su, C.-P.
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High lipid content and productivity of microalgae cultivating under elevated carbon dioxide.
Int. J. Environ. Sci. Technol.,
11,
703-710.
Keywords: Biodiesel; Chlorella; Global warming; Light intensity Strain(s): 2173 DOI: 10.1007/s13762-013-0251-y |
Huang, Y-T., Lai, C-W., Wu, B-W., Lin, K-S., Wu, J.C.S., Md Shahriar A Hossain, Yamauchi, Y., Wu, C.-W.
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Advances in bioconversion of microalgae with high biomass and lipid productivity.
J. Taiwan Inst. Chem. Eng.,
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Keywords: Bioconversion; Fatty acid; methyl esters; Illumination; Microalgae Strain(s): 2199 DOI: 10.1016/j.jtice.2017.05.026 |
Hunsperger, H. M., Randhawa, T., Cattolico, R. A.
2015
Extensive horizontal gene transfer, duplication, and loss of chlorophyll synthesis genes in the algae.
BMC Evol. Biol.,
15,
16 (article ID).
Keywords: Chlorophyll synthesis; Horizontal gene transfer; Endosymbiotic gene transfer; Gene duplication; Algae; Protochlorophyllide Strain(s): 293, 360, 484, 1363, 2140 PubMed: 25887237 DOI: 10.1186/s12862-015-0286-4 |
Huss, V. A. R., Wein, K. H., Kessler, E.
1988
Deoxyribonucleic acid reassociation in the taxonomy of the genus Chlorella.
Arch. Mikrobiol.,
150,
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Strain(s): 2163 |
Hwang, S. W., Choi, H. I., Sim, S. J.
2019
Acidic cultivation of Haematococcus pluvialis for improved astaxanthin production in the presence of a lethal fungus.
Bioresour. Technol.,
278,
138-144.
Keywords: Haematococcus pluvialis; Paraphysoderma sedebokerensis; Acidic cultivation; Stress relief; Astaxant Strain(s): 144 PubMed: 30685617 DOI: 10.1016/j.biortech.2019.01.080 |
Ichimura, T.
1971
Sexual cell division and conjugation-papilla formation in sexual reproduction of Closterium strigosum.
In Proceedings of the Seventh International Seaweed Symposium, University of Tokyo Press, Tokyo,
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Strain(s): 66, 262 |
Ichimura, T.
1973
Culture of microalgae (6).
Iden,
27,
97-101 (in Japanese).
Strain(s): 66, 173, 175, 179, 180, 181, 183, 198, 262, 338, 450 |
Ichimura, T.
1973
The life cycle and its control in some species of Closterium, with special reference to the biological species problems.
Thesis D. Sci., University of Tokyo,
69 pp., 11 tables, 40 figs.
Strain(s): 66, 67, 68, 124, 125, 127, 174, 175, 176, 177, 179, 180, 181, 182, 183, 185, 198, 202, 262, 337, 338, 450, 451 |
Ichimura, T.
1981
Mating types and reproductive isolation in Closterium ehrenbergii Meneghini.
Bot. Mag. Tokyo,
94,
325-334.
Keywords: biosystematic study; Closterium ehrenbergii; mating group; mating type; reproductive isolation Strain(s): 228, 229 DOI: 10.1007/BF02493393 |
Ichimura, T.
1983
Hybrid inviability and predominant survival of mating type minus progeny in laboratory crosses between two closely related mating groups of Closterium ehrenbergii.
Evolution,
37,
252-260.
Strain(s): 228, 229 |
Ichimura, T.
1997
Chlamydomonas pulsatilla Wollenweber from a supra-littoral rockpool on a small island offshore the city of Muroran, Hokkaido, Japan.
Algol. Stud.,
85,
23-29.
Keywords: Chlamydomonas pulsatilla; euryhaline species; acetate; nutrition; supra-littoral rockpool Strain(s): 122 |
Ichimura, T., Itoh, T.
1977
17. Preservation methods of microalgae (I) [17. Bisaisôrui no hozonhô (I)].
In Preservation methods of microorganisms [Biseibutsu Hozonhô], Ed. by Nei, T., University of Tokyo Press, Tokyo,
pp. 355-373 (in Japanese).
Strain(s): 19, 21, 22, 23, 24, 27, 28, 30, 31, 32, 33, 34, 36, 37, 38, 39, 40, 41, 44, 45, 46, 47, 48, 49, 50, 122, 123, 127, 131, 144, 152, 173, 175, 179, 180, 181, 182, 183, 185, 198, 200, 203, 206, 217, 226, 227, 241, 266, 267, 268, 271, 295, 309, 310, 334, 338, 379, 436, 448, 450, 455, 527 |
Ichimura, T., Kasai, F.
1984
Post-zygotic isolation between allopatric mating groups of Closterium ehrenbergii Meneghini (Conjugato-phyceae).
Phycologia,
23,
77-85.
Strain(s): 228, 229 DOI: 10.2216/i0031-8884-23-1-77.1 |
Ichimura, T., Kasai, F.
1984
Time lapse analyses of sexual reproduction in Closterium ehrenbergii (Conjugatophyceae).
J. Phycol.,
20,
258-265.
Keywords: Closterium ehrenbergii; conjugation; desmids; mating type; sexual reproduction Strain(s): 228, 229 DOI: 10.1111/j.0022-3646.1984.00258.x |
Ichimura, T., Kasai, F.
1985
Studies on the life cycle of Spinoclosterium cuspidatum (Bailey) Hirano (Conjugatophyceae).
Phycologia,
24,
205-216.
Strain(s): 325 DOI: 10.2216/i0031-8884-24-2-205.1 |
Ichimura, T., Kasai, F.
1987
Time-lapse analyses of sexual isolation between two closely related mating groups of the Closterium ehrenbergii species complex (Chlorophyta).
J. Phycol.,
23,
523-534.
Keywords: Closterium ehrenbergii; desmids; mating group; multiple-choice mating; no-choice mating; sexual interactions; sexual isolation; time-lapse photomicrography Strain(s): 228, 229 DOI: 10.1111/j.1529-8817.1987.tb04201.x |
Ichimura, T., Kasai, F.
1989
Life cycles of homothallic and heterothallic clones of Triploceras gracile Bailey (Desmidiaceae, Chlorophyta).
Phycologia,
28,
212-221.
Strain(s): 789, 790, 791, 792, 793, 794, 795, 796 DOI: 10.2216/i0031-8884-28-2-212.1 |
Ichimura, T., Watanabe, M.
1974
The Closterium calosporum complex from the Ryukyu Islands - Variation and taxonomical problems.
Mem. Natn. Sci. Mus. Tokyo,
7,
89-102, pls. 13-14.
Strain(s): 163, 164, 165, 168, 186, 187, 194, 271, 339, 340, 341 |
Ichimura, T., Watanabe, M. M.
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An axenic clone of Microcystis aeruginosa Kutz. emend. Elenkin from Lake Kasumigaura.
Bull. Jpn. Soc. Phycol.,
25,
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Diversity and oceanic distribution of the Parmales (Bolidophyceae), a picoplanktonic group closely related to diatoms.
ISME J.,
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Strain(s): 2565, 2682, 3369, 3370, 3371, 3699, 3700, 3701 PubMed: 27003244 DOI: 10.1038/ismej.2016.38 |
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Growth characteristics and vertical distribution of Triparma laevis (Parmales) during summer in the Oyashio region, western North Pacific.
Aquat. Microb. Ecol.,
68,
107-116.
Keywords: Triparma laevis; Parmales; Vertical distribution; Growth characteristics; Oyashio region Strain(s): 2565 DOI: 10.3354/ame01606 |
Ichinomiya, M., Yoshikawa, S., Kmiya, M., Ohki, K., Takaichi, S., Kuwata, A.
2011
Isolation and characterization of Parmales (Heterokonta/Heterokontophyta/Stramenopiles) from the Oyashio region, Western North Pacific.
J. Phycol.,
47,
144-151.
Keywords: Bolidophyceae; diatoms; heterokonts; Parmales; PDMPO; phylogeny; stramenopiles; Triparma laevis Strain(s): 2565, 2682 PubMed: 27021720 DOI: 10.1111/j.1529-8817.2010.00926.x |
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Cytological analyses by advanced electron microscopy.
In Cyanidioschyzon merolae: A New Model Eukaryote for Cell and Organelle Biology, Eds. by Kuroiwa, T., Miyagishima, S., Matsunaga, S., Sato, N., Nozaki, H., Tanaka, K., Misumi, O., Springer Singapore,
pp. 129-151.
Keywords: FIB-SEM; SBF-SEM; EM-tomography; EM (electron microscopy); Block-face imaging; Cryo-TEM; Cryo-TEM tomography; Cyanidioschyzon merolae; Physical fixation Strain(s): 1804 DOI: 10.1007/978-981-10-6101-1_9 |
Iehara, M.
1990
Kinetic analysis of the growth of Chlorella vulgaris.
Biotech. Bioeng.,
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Strain(s): 227 PubMed: 18595068 DOI: 10.1002/bit.260360212 |
Iida, H., Nishii, I., Inouye, I.
2011
Embryogenesis and positioning in Platydorina caudata (Volvocaceae, Chlorophyta).
Phycologia,
50,
530-540.
Keywords: Volvocaceae; inversion; intercalation; cytoplasmic bridge; stalk; colony formation Strain(s): 728, 729 DOI: 10.2216/10-80.1 |
Iida, H., Ota, S., Inouye, I.
2013
Cleavage, incomplete inversion, and cytoplasmic bridges in Gonium pectorale (Volvocales, Chlorophyta).
J. Plant Res.,
126,
699-707.
Keywords: Cytoplasmic bridge; Gonium; Inversion; Multicellularity; Transmission electron microscopy; Volvocales Strain(s): 645 PubMed: 23455615 DOI: 10.1007/s10265-013-0553-7 |
Iida, K., Takishita, K., Ohshima, K., Inagaki, Y.
2007
Assessing the monophyly of chlorophyll-c containing plastids by multi-gene phylogenies under the unlinked model conditions.
Mol. Phylogenet. Evol.,
45(1),
227-238.
Keywords: chromist; chromalveolate; secondary endosymbiosis; model misspecification; separate model; concatenate model Strain(s): 1, 15, 548, 670, 716 PubMed: 17591448 DOI: 10.1016/j.ympev.2007.05.003 |
Iino, M., Hashimoto, H.
2003
Intermediate features of cyanelle division of Cyanophora paradoxa (Glaucocystophyta) between cyanobacterial and plastid division.
J. Phycol.,
39,
561-569.
Keywords: chloroplast division; cyanelle; Cyanophora paradoxa; endosymbiosis; Glaucocystophyta; peptidoglycan; plastid dividing-ring; plastid division; plastid envelope Strain(s): 547 DOI: 10.1046/j.1529-8817.2003.02132.x |
Ikegami, S., Imai, I., Kato, J., Ohtake, H.
1995
Chemotaxis toward inorganic phosphate in the red tide alga Chattonella antiqua.
J. Plankton Res.,
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First report of Microcystis strains producing MC-FR and -WR toxins in Japan.
Toxins,
11,
521 (article ID).
Keywords: Cyanobacteria; Microcystis; microcystins; environmental water; liquid chromatographymass spectrometry; protein phosphatase 2A inhibition assay Strain(s): 4344, 4345 PubMed: 31505765 DOI: 10.3390/toxins11090521 |
Ikushima, T.
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Action of furylfuramide (AF-2) on chloroplasts of Euglena gracilis.
Annu. Rep. Res. Reactor Inst. Kyoto Univ.,
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Strain(s): 48 |
Imai, A., Fukushima, T., Matsushige, K.
1999
Effects of aquatic humic substances on the growth of the cyanobacterium Microcystis aeruginosa.
J. Jpn. Soc. Wat. Environ. [Mizukankyô Gakkai Shi],
22,
555-560 (in Japanese with English summary).
Keywords: aquatic humic substances; Microcystis aeruginosa; iron limitation; siderophore; Lake Kasumigaura Strain(s): 98 |
Imai, A., Fukushima, T., Matsushige, K.
1999
Effects of iron limitation and aquatic humic substances on the growth of Microcystis aeruginosa.
Can. J. Fish. Aquat. Sci.,
56,
1929-1937.
Strain(s): 98 DOI: 10.1139/f99-131 |
Imai, I., Fujimaru, D., Nishigaki, T.
2002
Co-culture of fish with macroalgae and associated bacteria: A possible mitigation strategy for noxious red tides in enclosed coastal sea.
Fish. Sci.,
68,
493-496.
Keywords: red tide; mitigation; algicidal bacteria; macroalgae; co-culture of fish and macroalgae Strain(s): 1 DOI: 10.2331/fishsci.68.sup1_493 |
Imai, I., Hatano, M., Naito, K.
2004
Development of a chemically defined artificial medium for marine red tide-causing raphidophycean flagellates.
Plankton Biol. Ecol.,
95,
95-102.
Keywords: Chattonella; Fibrocapsa; artificial media; molybdenum; iodine Strain(s): 1 |
Imai, I., Ishida, Y., Hata, Y.
1993
Killing of marine phytoplankton by a gliding bacterium Cytophaga sp., isolated from the coastal sea of Japan.
Mar. Biol.,
116,
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Strain(s): 1 DOI: 10.1007/BF00355470 |
Imai, I., Ishida, Y., Sakaguchi, K., Hata, Y.
1995
Algicidal marine bacteria isolated from northern Hiroshima Bay, Japan.
Fish. Sci.,
61,
628-636.
Keywords: algicidal bacteria; red tide; Chattonella; Alteromonas Strain(s): 1 DOI: 10.2331/fishsci.61.628 |
Imai, I., Ishida, Y., Sawayama, S., Hata, Y.
1991
Isolation of a marine gliding bacterium that kills Chattonella antiqua (Raphidophyceae).
Nippon Suisan Gakkaishi,
57,
1409.
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Imai, I., Kim, M. C., Nagasaki, K., Itakura, S., Ishida, Y.
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Detection and enumeration of microorganisms that are lethal to harmful phytoplankton in coastal waters.
Plankton Biol. Ecol.,
45,
19-29.
Keywords: red tide; Chattonella; Heterosigma; killer bacteria; viruses Strain(s): 1 |
Imai, I., Kim, M. C., Nagasaki, K., Itakura, S., Ishida, Y.
1998
Relationships between dynamics of red tide-causing raphidophycean flagellates and algicidal micro-organisms in the coastal sea of Japan.
Phycol. Res.,
46,
139-146.
Keywords: algicidal bacteria; Chattonella; Heterosigma; Raphidophyceae; red tide; virus Strain(s): 1 DOI: 10.1111/j.1440-1835.1998.tb00106.x |
Imai, I., Nakagiri, S., Nagai, K., Nagasaki, K., Itakura, S., Yamaguchi, M.
1998
Fluctuations of algicidal microorganisms against the harmful dinoflagellate Heterocapsa circularisquama in Ago Bay, Mie Prefecture, Japan.
Bull. Nansei Natl. Fish. Res. Inst.,
31,
53-61 (in Japanese with English summary).
Keywords: red tide; Heterocapsa circularisquama; algicidal bacteria; viruses; Ago Bay Strain(s): 1 |
Imaizumi, M., Sekimoto, H., Noguchi, T.
2007
Induction of sex pheromone secretion and observations of the secretory pathway in the Closterium peracerosum-strigosum-littorale complex.
Plant Sci.,
173,
206-212.
Keywords: Closterium peracerosum-strigosum-littorale; Immunoelectron microscopy; Protoplast release-inducing protein; Sex pheromone; Sexual reproduction; Zygote formation Strain(s): 67, 68 DOI: 10.1016/j.plantsci.2007.05.002 |
Imamura, N., Motoike, I., Noda, M., Adachi, K., Konno, A., Fukami, H.
2000
Argimicin A, a novel anti-cyanobacterial compound produced by an algae-lysing bacterium.
J. Antibiotics,
53,
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Strain(s): 102, 298 |
Imamura, N., Motoike, I., Shimada, N., Nishikori, M., Morisaki, H., Fukami, H.
2001
An efficient screening approach for anti-Microcystis compounds based on knowledge of aquatic microbial ecosystem.
J. Antibiotics,
54,
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Strain(s): 102, 228 PubMed: 11560377 DOI: 10.7164/antibiotics.54.582 |
Imamura, S., Hanaoka, M., Tanaka, K.
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The plant-specific TFIIB-related protein, pBrp, is a general transcription factor for RNA polymerase I.
EMBO J.,
27,
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Strain(s): 3377 PubMed: 18668124 DOI: 10.1038/emboj.2008.151 |
Imamura, S., Kanesaki, Y., Ohnuma, M., Inouye, T., Sekine, Y., Fujiwara, T., Kuroiwa, T., Tanaka, K.
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R2R3-type MYB transcription factor, CmMYB1, is a central nitrogen assimilation regulator in Cyanidioschyzon merolae.
Proc. Nati. Acad. Sci. U. S. A.,
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Strain(s): 3377 PubMed: 1959251 DOI: 10.1073/pnas.0902790106 |
Imamura, S., Nomura, Y., Takemura, T., Pancha, I., Taki, K., Toguchi, K., Tozawa, Y., Tanaka K.
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The checkpoint kinase TOR (target of rapamycin) regulates expression of a nuclear‐encoded chloroplast RelA‐SpoT homolog (RSH) and modulates chloroplast ribosomal RNA synthesis in a unicellular red alga.
Plant J.,
94,
327-339.
Keywords: RelA-SpoT homolog; ppGpp; red alga; ribosomal RNA; target of rapamycin Strain(s): 3377 PubMed: 29441718 DOI: 10.1111/tpj.13859 |
Imamura, S., Terashita, M., Ohnuma, M., Maruyama, S., Minoda, A., Weber, A. P. M., Inouye, T., Sekine, Y., Fujita, Y., Omata, T., Tanaka, K.
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Nitrate assimilatory genes and their transcriptional regulation in a unicellular red alga Cyanidioschyzon merolae: genetic evidence for nitrite reduction by a sulfite reductase-like enzyme.
Plant Cell Physiol.,
51,
707-717.
Keywords: Cyanidioschyzon merolae; Nitrate assimilation; Nitrite reductase; Nitrogen regulation; Red alga; Sulfite reductase Strain(s): 3377 PubMed: 20375110 DOI: 10.1093/pcp/pcq043 |
Imanishi, S. Y., Nakayama, T., Asukabe, H., Harada, K.
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Application of MALDI Biotyper to cyanobacterial profiling.
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Strain(s): 73, 89, 102, 103, 107, 112, 298, 611, 808, 809, 835, 843, 989, 1025, 1043, 1058, 1071, 1099, 1642, 1652, 1672 PubMed: 27862451 DOI: 10.1002/rcm.7793 |
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Estimating the viability of Chlorella exposed to oxidative stresses based around photocatalysis.
Int. Biodeterior. Biodegrad.,
78,
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Keywords: Autofluorescence; Cell staining; Chlorella sorokiniana; Oxidative stress: TiO2 photocatalysis; Viability assay Strain(s): 2169 DOI: 10.1016/j.ibiod.2012.12.006 |
Imoto, Y., Kuroiwa, H., Yoshida, Y., Ohnuma, M., Fujiwara, T., Yoshida, M., Nishida, K., Yagisawa, F., Hirooka, S., Miyagishima, S.Y., Misumi, O., Kawano, S., Kuroiwa, T.
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Single-membrane-bound peroxisome division revealed by isolation of dynamin-based machinery.
Proc. Nati. Acad. Sci. U. S. A.,
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Temporal and spatial distribution of algicidal and growth-inhibiting bacteria in the coastal sea of southwest Japan.
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Stimulatory and inhibitory effect of light on the nitrate assimilation by Chlorella.
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Directionally evolving genetic code: the UGA codon from stop to tryptophan in mitochondria.
J. Mol. Evol.,
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1997
Algae or protozoa: phylogenetic position of euglenophytes and dinoflagellates as inferred from mitochondrial sequences.
J. Mol. Evol.,
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Keywords: mitochondrial COXI gene; Dinoflagellata; Apicomplexa; Kinetoplastida; Euglenophyta; endosymbiosis; genetic code; malarian circle Strain(s): 12, 369, 381 DOI: 10.1007/PL00006233 |
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1990
Studies on the removal and decomposition of Microcystis viridis toxic substance in the bio-film reactor.
Jpn. J. Water Poll. Res.,
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Keywords: Microcystis viridis; toxic substance cyanoviridin; bio-film reactor; hydraulic retention time Strain(s): 102 |
Inamura, E., Katayama, T., Taguchi, S.
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Absorption of low-dose ultraviolet radiation by mycosporine-like amino acids induced by the dinoflagellate Prorocentrum micans.
Plankton Benthos Res.,
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Inoue, Y., Hata, T., Kawai, S., Okamura,H., Nishida, T.
2010
Elimination and detoxification of triclosan by manganese peroxidase from white rot fungus.
J. Hazard. Mater.,
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2018
Characterization of mycosporine-like amino acids in the cyanobacterium Nostoc verrucosum.
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Keywords: antioxidant; environmental adaptation; mycosporine-like amino acid (MAA); mys genes Strain(s): 2538, 2539 DOI: 10.2323/jgam.2017.12.003 |
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Isolation of herbicide-resistant mutants of Botryococcus braunii.
Bioresour. Technol.,
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One-pot, simultaneous cell wall disruption and complete extraction of astaxanthin from Haematococcus pluvialis at room temperature.
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Keywords: Haematococcus pluvialis; One-pot method; Cell wall disruption; Extraction; Astaxanthin; Antioxidant activity; GRAS solvent Strain(s): 144 DOI: 10.1021/acssuschemeng.9b02089 |
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Description of two new monoecious species of Volvox sect. Volvox (Volvocaceae, Chlorophyceae), based on comparative morphology and molecular phylogeny of cultured material.
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Keywords: Chlorophyceae; cultures; molecular phylogeny; morphology; taxonomy; Volvocaceae; Volvox ferrisii sp. nov.; Volvox kirkiorum sp. nov.; Volvox sect. Volvox Strain(s): 543, 2736, 2737, 2738, 2739, 2740 PubMed: 27011093 DOI: 10.1111/j.1529-8817.2012.01142.x |
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A blue-light-activated adenylyl cyclase mediates photoavoidance in Euglena gracilis.
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Culture conditions and characteristics of offensive odor-producing substance in the genus Uroglena [Uroglena zoku no baiyôjôken to syûkibusshitsu tokusei].
In Proceedings of 27th Annual Meeting of Japan Society on Water Environment [Dai 27kai Nippon Mizukankyô-Gakkai Nenkaikôensyû],
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Strain(s): 395 |
Ishibashi, Y., Oikawa, E., Honda, H., Adachi, T., Nakatochi, M.
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Analyses of growth factors of taste and odor producing algae by a fuzzy neural network.
Environ. Eng. Res. [Kankyô-kôgaku Kenkyû Ronbunshû],
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Keywords: musty odor; Phormidium tenue; Uroglena americana; fuzzy neural network; wind speed Strain(s): 512 |
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Four new microginins, linear peptides from the cyanobacterium Microcystis aeruginosa.
Tetrahedron,
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Micropeptins 88-A to 88-F, chymotrypsin inhibitors from the cyanobacterium Microcystis aeruginosa (NIES-88).
Tetrahedron,
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Strain(s): 88 DOI: 10.1016/S0040-4020(98)00242-7 |
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Kawaguchipeptin A, a novel cyclic undecapeptide from cyanobacterium Microcystis aeruginosa (NIES-88).
Tetrahedron,
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The absolute stereochemistry of micropeptin 90.
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Kawaguchipeptin B, an antibacterial cyclic undecapeptide from the cyanobacterium Microcystis aeruginosa.
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Microginins 299-A and -B, leucine aminopeptidase inhibitors from the cyanobacterium Microcystis aeruginosa (NIES-299).
Tetrahedron,
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Micropeptins 478-A and -B, plasmin inhibitors from the cyanobacterium Microcystis aeruginosa.
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Micropeptin 90, a plasmin and trypsin inhibitor from the blue-green alga Microcystis aeruginosa (NIES-90).
Tetrahedron Letters,
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Microcyclamide, a cytotoxic cyclic hexapeptide from the cyanobacterium Microcystis aeruginosa.
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Aeruginosins, protease inhibitors from the cyanobacterium Microcystis aeruginosa.
Tetrahedron,
55,
10971-10988.
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Evidence for polyphyletic origin of the members of the orders of Oscillatoriales and Pleurocapsales as determined by 16S rDNA analysis.
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Phylogenetic relationships of filamentous cyanobacterial taxa inferred from 16S rRNA sequence divergence.
J. Gen. Appl. Microbiol.,
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Ishikawa, I. S.
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Characteristic structures of Spirulina trichome involved in gliding movement.
Plant Morphol.,
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7-14.
Keywords: gliding movement; Spirulina; thylakoid; trichome; motive force Strain(s): 27 DOI: 10.5685/plmorphol.2.7 |
Ishikawa, M., Takahashi, F., Nozaki, H., Nagasato, C., Motomura, T., Kataoka, H.
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Distribution and phylogeny of the blue light receptors aureochromes in eukaryotes.
Planta,
230,
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Ishimitsu, M., Chihara, M.
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Four species of Cryptomonas (Class Cryptophyceae) in Japan.
J. Jpn. Bot.,
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Isolation and characterization of a stress-responsive gene encoding a CHRD domain-containing protein from a halotolerant green alga.
Gene,
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Keywords: Stress response; Chlamydomonas reinhardtii; Secretory protein; Recombinant protein; Unknown function Strain(s): 2235 PubMed: 29017964 DOI: 10.1016/j.gene.2017.10.012 |
Ishitsuka, M. O., Kusumi, T., Kakisawa, H., Kaya, K., Watanabe, M. M.
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Microviridin: a novel tricyclic depsipeptide from the toxic cyanobacterium Microcystis viridis.
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Isono, T., Katoh, T.
1982
Cylindrical phycobilisomes from a blue-green alga, Anabaena variabilis.
Plant Cell Physiol.,
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Keywords: blue-green alga (Anabaena variabilis); electron micrograph; cylindrical phycobilisomes; phycobilisomes; protein assembly Strain(s): 2093 DOI: 10.1093/oxfordjournals.pcp.a076481 |
Isono, T., Katoh, T.
1983
Subparticles of Anabaena phycobilisomes. 1. Reconstruction of allophycocyanin cores and entire phycobilisomes.
Plant Cell Physiol.,
24,
357-368.
Keywords: allophycocyanin (assembly); blue-green algae (Anabaena variabilis); in vitro association (phycobilisome); phycobilisome core; phycobilisome; protein assembly Strain(s): 2093 |
Isozaki, A., Nakagawa, Y., Loo, M. H., Shibata, Y., Tanaka, N., Setyaningrum, D. L., Park, J.-W., Shirasaki, Y., Mikami, H., Huang, D., Tsoi, H., Riche, C. T., Ota, T., Miwa, H., Kanda, Y., Ito, T., Yamada, K., Iwata, O., Suzuki, K., Ohnuki, S., Ohya, Y., Kato, Y., Hasunuma, T., Matsusaka, S., Yamagishi, M., Yazawa, M., Uemura, S., Nagasawa, K., ,Watarai, H. Di Carlo, D., Goda, K.
2020
Sequentially addressable dielectrophoretic array for high-throughput sorting of large-volume biological compartments.
Sci. Adv.,
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Issarapayup, K., Powtongsook, S., Pavasant, P.
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Flat panel airlift photobioreactors for cultivation of vegetative cells of microalga Haematococcus pluvialis.
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Economical review of Haematococcus pluvialis culture in flat-panel airlift photobioreactors.
Aquac. Eng.,
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Growth reduction of Microcystis aeruginosa by clay ball elution solution.
Appl. Clay Sci.,
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Keywords: Cyanobacterial bloom; Clay ball; Microcystis aeruginosa; Silicate; Diatom; Concrete Strain(s): 71, 1068 DOI: 10.1016/j.clay.2018.06.018 |
Itoh, Y., Murakami, H., Ikeda, R.
1993
Studies on the growth limiting nutrients of red tide plankton in the tidal area [Kanchô-iki ni okeru akashio gen'in sôrui no zôshoku yokusei inshi no suitei].
Proc. Coast. Engineering, JSCE [Kaigan Kôgaku Ronbun-shû],
40,
1001-1005 (in Japanese without English title).
Strain(s): 323 |
Itou, Y., Ishida, K., Shin, H. J., Murakami, M.
1999
Oscillapeptins A to F, serine protease inhibitors from the three strains of Oscillatoria agardhii.
Tetrahedron,
55,
6871-6882.
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Itou, Y., Okada, S., Murakami, M.
2001
Two structural isomeric siderophores from the freshwater cyanobacterium Anabaena cylindrica (NIES-19).
Tetrahedron,
57,
9093-9099.
Keywords: iron; sidenophore; cyanobacteria; Anabaena cylindrica; CAS Strain(s): 19 DOI: 10.1016/S0040-4020(01)00934-6 |
Itou, Y., Suzuki, S., Ishida, K., Murakami, M.
1999
Anabaenopeptins G and H, potent carboxypeptidase A inhibitors from the cyanobacterium Oscillatoria agardhii (NIES-595).
Bioorg. Med. Chem. Lett.,
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Strain(s): 595 PubMed: 10340607 DOI: 10.1016/S0960-894X(99)00191-2 |
Iwahori, K., Miyata, N., Umeda, Y., Aoyama, K., Shimoi, K., Kinae, N.
1999
Applicability of environmental microorganisms to alkaline single cell gel electrophoresis (comet) assay.
Jpn. J. Water Treat. Biol.,
35,
261-270 (in Japanese with English summary).
Keywords: comet assay; DNA damage; environmental microorganisms; Euglena gracilis; cell lysis; unwinding; electrophoresis; SDS; γ-irradiation Strain(s): 49, 122, 403 |
Iwahori, K., Miyata, N., Yamamoto, Y., Sone, D., Aoyama, K.
2004
Normalization of DNA damage indices in comet assay for comparing with various mutagenicity tests.
Jpn. J. Water Treat. Biol.,
40,
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Keywords: comet assay; tail moment; normalization; mutagenicity test Strain(s): 49 |
Iwai, M., Hori, K., Sasaki-Sekimoto, Y., Shimojima, M., Ohta, H.
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Manipulation of oil synthesis in Nannochloropsis strain NIES-2145 with a phosphorus starvation–inducible promoter from Chlamydomonas reinhardtii.
Front. Microbiol.
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912 (article ID).
Keywords: algae; Nannochloropsis; phosphorus starvation; inducible promoter; triacylglycerol Strain(s): 2145 PubMed: 26441858 DOI: 10.3389/fmicb.2015.00912 |
Iwai, S., Fujita, K., Takanishi, Y., Fukushi, K.
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Photosynthetic endosymbionts benefit from host’s phagotrophy, including predation on potential competitors.
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Degradation characteris-tics of toxic Microcystis viridis by Mastigophora, Monas guttula using aquatic large scale microcosm.
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Keywords: degradation; Microcystis; microflagellate; toxic substance; aquatic large scale microcosm Strain(s): 102 |
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A novel glycolate oxidase requiring flavin mononucleotide as the cofactor in the prasinophycean alga Mesostigma viride.
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Characterization of NADH nitrate reductase from the coccolithophorid Emiliania huxleyi (Lohman) Hay & Mohler (Haptophyceae).
Mar. Biotechnol.,
5,
20-26.
Keywords: coccolithophorid; Emiliania huxleyi; enzyme purification; nitrate reductase; nitrate utilization Strain(s): 837 PubMed: 12925915 DOI: 10.1007/s10126-002-0051-8 |
Iwamoto, K., Shiraiwa, Y.
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Characterization of intracellular iodine accumulation by iodine-tolerant microalgae.
Procedia Environ. Sco.,
15,
34-42.
Keywords: growth stimulation; growth inhibition; haptophyte; iodine; iodine accumulation Strain(s): 377, 837, 838 DOI: 10.1016/j.proenv.2012.05.007 |
Iwamoto, K., Shiraiwa, Y.
2017
Accumulation of cesium by aquatic plants and algae.
In Impact of Cesium on Plants and the Environment, Eds. by Gupta, D. & Walther, C., Springer International Publishing,
pp. 171-185.
Keywords: Eustigmatophycean alga; Vacuoliviride crystalliferum; Fukushima 1st Nuclear Power Plant Accident; High cesium-accumulating microalgae; Phytoremediation; Radioactive cesium Strain(s): 329, 1458, 2131, 2352 DOI: 10.1007/978-3-319-41525-3_10 |
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Distribution of nucleic acids among subcellular fractions of Chlorella.
Biochim. Biophys. Acta,
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Iwamura, T.
1962
Cellular distributions and properties of nucleic acid species in Chlorella.
In Symposium in Institute of Applied Microbiology, University of Tokyo, Vol. III,
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Strain(s): 2170 |
Iwamura, T.
1962
Characterization of the turnover of chloroplast deoxyribonucleic acid in Chlorella.
Biochim. Biophys. Acta,
61,
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Strain(s): 2170 DOI: 10.1016/0926-6550(62)90155-X |
Iwamura, T.
1965
Change of nucleic acid content in Chlorella cells during the course of their life-cycle.
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Iwamura, T.
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Nucleic acid in chloroplasts and metabolic DNA.
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Iwamura, T.
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Phylogenetic aspects of algal biochemistry (1) DNA species in algae.
Ann. NY Acad. Sci.,
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Iwamura, T.
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The feasibility of Chlorella as the exchanger of CO2 for O2 and the food resources in the space station.
In Biological Sciences in Space 1986, Eds. by Watanabe, S. et al., MYU Research, Tokyo,
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Strain(s): 2170 |
Iwamura, T., Aoshima, J.
1984
Multiplication of chloroplast DNA.
Protein, Nucleic Acid and Enzyme,
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Strain(s): 2170 |
Iwamura, T., Hase, E., Moriyama, Y., Tamiya, H.
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Life cycle of the green alga Chlorella with special reference to the protein and nucleic acids contents of cells in successive formative stages.
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Iwamura, T., Kanazawa, T., Kanazawa, K.
1963
Nucleotide metabolism in Chlorella. I. Chromatographic analysis of the acid-soluble nucleotides.
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Iwamura, T., Kanazawa, T., Kanazawa, K.
1963
Nucleotide metabolism in Chlorella. II. Quantitative changes in component-nucleotides of the acid-soluble fraction of algal cells during their life-cycle.
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Iwamura, T., Katoh, K., Nishimura, T.
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Semi-conservative replication of chloroplast DNA in synchronized Chlorella.
Cell Struct. Funct.,
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Inhibition of growth of Chlorella by various drugs.
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Iwamura, T., Kuwashima, S.
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Formation of adenosine 5-triphosphate from polyphosphate by a cell-free extract from Chlorella.
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Prasinoderma singularis sp. nov. (Prasinophyceae, Chlorophyta), a solitary coccoid prasinophyte from the South-East Pacific Ocean.
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The analysis of cyanobacterial neurotoxins by high-performance liquid chromatography-mass spectrometry.
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Photoautotrophic high-density cultivation of vegetative cells of Haematococcus pluvialis in airlift bioreactor.
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Protist,
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A front-end desaturase from the green alga Chlamydomonas reinhardtii produces pinolenic and coniferonic acids by ω13 desaturation in methylotrophic yeast and tobacco.
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Ca2+- and glycoconjugates-dependent prey capture in the heliozoan Actinophrys sol.
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Kamata, K., Piao, Z., Suzuki, S., Fujimori, T., Tajiri, W., Nagai, K., Iyoda, T., Yamada, A., Hayakawa, T., Ishiwara, M., Horaguchi, S., Belay, A., Tanaka, T., Takano, K., Hangyo M.
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Spirulina-templated metal microcoils with controlled helical structures for THz electromagnetic responses.
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Growth stimulation and inhibition effects of 4-hydroxybenzoic acid and some related compounds on the freshwater green alga Pseudokirchneriella subcapitata.
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Tylosin degradation during manure composting and the effect of the degradation byproducts on the growth of green algae.
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Application of a real-time PCR assay to a comprehensive method of monitoring harmful algae.
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Kamikawa, R., Azuma, T., Ishii, K-I., Matsuno, Y., Miyashita, H.
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Diversity of organellar genomes in non-photosynthetic diatoms.
Protist,
169,
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Kamikawa, R., Brown, M. W., Nishimura, Y., Sako, Y., Heiss, A. A., Yubuki, N., Gawryluk, R., Simpson, A. G. B., Roger, A. J., Hashimoto, T., Inagaki, Y.
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Parallel re-modeling of EF-1α function: divergent EF-1α genes co-occur with EFL genes in diverse distantly related eukaryotes.
BMC Evol. Biol.,
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131 (article ID).
Keywords: Diatoms; Differential Gene Loss; EF-1α; EFL; Functional Remodeling; Goniomonas; Pythium; Spizellomyces; Thecamonas Strain(s): 417, 534, 1349, 1371, 1373, 1374 PubMed: 23800323 DOI: 10.1186/1471-2148-13-131 |
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Mitochondrial group II introns in the Raphidophycean flagellate Chattonella spp. suggest a diatom-to-Chattonella lateral group II intron transfer.
Protist,
160,
364-375.
Keywords: Chattonella; cytochrome c oxidase subunit 1 (cox1); diatoms; group II intron; lateral transfer; Raphidophyceae Strain(s): 1, 2, 3, 14, 85, 86, 115, 118, 121, 161, 462, 557, 558, 603, 671, 716, 849, 1303, 1975, 1976, 2391, 2401, 2402, 2403, 2404, 3422, 3429 PubMed: 19346162 DOI: 10.1016/j.protis.2009.02.003 |
Kamikawa, R., Masuda, I., Oyama, K., Yoshimatsu, S., Sako, Y.
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Genetic variation in mitochondrial genes and intergenic spacer region in harmful algae Chattonella species.
Fish. Sci.,
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Keywords: Chattonella sp.; cytochrome c oxidase subunit 1 (cox1); cytochrome c oxidase subunit 2 (cox2); genetic diversity; harmful algae; mitochondria Strain(s): 1, 2, 3, 14, 85, 86, 115, 118, 121, 161, 557, 558, 603, 671, 849, 3422, 3428, 3429 DOI: 10.1111/j.1444-2906.2007.01408.x |
Kamikawa, R., Sanchez-Perez, G. F., Sako, Y., Roger, A. J., Inagaki, Y.
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Expanded phylogenies of canonical and non-canonical types of methionine adenosyltransferase reveal a complex history of these gene families in eukaryotes.
Mol. Phylogenet. Evol.,
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Group II intron-mediated trans-splicing in the green-rich mitochondrial genome of an enigmatic eukaryote, Diphylleia rotans.
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Kamikawa, R., Tanifuji, G., Kawachi, M., Miyashita, H., Hashimoto, T., Inagaki, Y.
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Plastid genome-based phylogeny pinpointed the origin of the green-colored plastid in the dinoflagellate Lepidodinium chlorophorum.
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Kamikawa, R., Tanifuji, Ishikawa, G. S., Ishii, K., Matsuno, Y., Onodera, N. T., Ishida, K-I., Hashimoto, T., Miyashita, H., Mayama, S., Inagaki, Y.
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Proposal of a Twin-arginine translocator system-mediated constraint against loss of ATP synthase genes from nonphotosynthetic plastid genomes.
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Kamiya, A.
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Effects of blue light and ammonia on nitrogen metabolism in a colorless mutant of Chlorella.
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Effects of blue light on respiration and carbon dioxyde fixation in colorless Chlorella mutant cells.
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Subunit constitution of carbonic anhydrase from Chlamydomonas reinhardtii.
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Quantitative separation of inorganic polyphosphates in Chlorella cells.
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Kanai, R., Miyachi, S., Miyachi, S.
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Kanazawa, T.
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Kanazawa, T., Fujita, C., Yuhara, T., Sasa, T.
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Toxicity evaluation of municipal solid waste incinerator fly ash by algal assay.
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Kaneko, H., Yamaguchi, M., Ikeda, F.
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Toxicity of municipal solid waste incinerator fly ash and the contribution of Cadmium.
J. Jpn. Soc. Wat. Environ. [Mizukankyô Gakkai Shi],
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Keywords: MWI fly ash; leachate; algal assay; Daphnia test; hazardous waste Strain(s): 35 |
Kaneko, T., Nakajima, N., Okamoto, S., Suzuki, I., Tanabe, Y., Tamaoki, M., Nakamura, Y., Kasai, F., Watanabe, A., Kawashima, K., Kishida, Y., Ono, A., Shimizu, Y., Takahashi, C., Minami, C., Fujishiro, T., Kohara, M., Katoh, M., Nakazaki, N., Nakayama, S., Yamada, M., Tabata, S., Watanabe, M. M.
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Complete genomic structure of the bloom-forming toxic cyanobacterium Microcystis aeruginosa NIES-843.
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Isolation of water-soluble cytochromes from cyanobacteria by adsorption chromatography.
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Use of lactic acid bacteria as a biological agent against the cyanobacterium Anabaena flos-aquae.
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Stable transformation of unicellular green alga Coccomyxa subellipsoidea C-169 via electroporation.
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Isolation and molecular identification of some blue-green algae (cyanobacteria) from freshwater sites in Tokat province of Turkey.
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Karlsson, K.
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Liquid chromatotraphy - mass spectrometry in distribution and bioaccumulation studies of toxic cyanopeptides.
PhD thesis, Åbo Akademi University, Turku, Finland,
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Kasai, F., Arts, M. T.
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The interactive effects of UV-B radiation and a herbicide on uptake and allocation of carbon in two strains of the green alga Scenedesmus.
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Keywords: herbicide tolerance; photosynthesis; phytoplankton; simetryn; triazine herbicides; ultraviolet radiation Strain(s): 802 DOI: 10.1007/BF02493513 |
Kasai, F., Hanazato, T.
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Genetic changes in phytoplankton communities exposed to the herbicide simetryn in outdoor experimental ponds.
Arch. Environ. Contam. Toxicol.,
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Strain(s): 797, 798, 799, 800, 801, 802 DOI: 10.1007/BF00217610 |
Kasai, F., Hatakeyama, S.
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Herbicide susceptibility in two green algae, Chlorella vulgaris and Selenastrum capricornutum.
Chemosphere,
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Kasai, F., Hatakeyama, S.
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Changes in herbicide susceptibility of algae in a river running through an agricultural region.
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Kasai, F., Ichimura, T.
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Morphological variabilities of three closely related mating groups of Closterium ehrenbergii Meneghini (Chlorophyta).
J. Phycol.,
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Keywords: cell shape and size; clonal culture; Closterium ehrenbergii; mating group; morphological variability; statistical analysis Strain(s): 171, 228, 229 DOI: 10.1111/j.1529-8817.1986.tb04159.x |
Kasai, F., Ichimura, T.
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Temperature optima of three closely related mating groups of the Closterium ehrenbergii (Chlorophyta) species complex.
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Effects of simetryne on growth of various freshwater algal taxa.
Environ. Pollut.,
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Kashem, MA., Kimoto, K., Iribe, Y., Suzuki, M.
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Development of microalgae biosensor chip by incorporating microarray oxygen sensor for pesticides sensing.
Biosensors,
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Kashino, Y., Enami, I., Satoh, K., Katoh, S.
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Immunological cross-reactivity among corresponding proteins of photosystems I and II from widely divergent photosynthetic organisms.
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Kashiyama Y., Yokoyama A., Kinoshita Y., Shoji S., Miyashiya H., Shiratori T., Suga H., Ishikawa K., Ishikawa A., Inouye I., Ishida K., Fujinuma D., Aoki K., Kobayashi M., Nomoto S., Mizoguchi T., Tamiaki H.
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Ubiquity and quantitative significance of detoxification catabolism of chlorophyll associated with protistan herbivory.
Proc. Nati. Acad. Sci. U. S. A.,
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Keywords: phototoxicity of chlorophylls; microbial herbivory; phagocytosis; biodiversity of eukaryotes; microbial loop Strain(s): 281 PubMed: 22949677 DOI: 10.1073/pnas.1207347109 |
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Taming chlorophylls by early eukaryotes underpinned algal interactions and the diversification of the eukaryotes on the oxygenated Earth.
ISME J.,
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Strain(s): 8, 254, 274, 286, 324, 331, 353, 381, 494, 623, 624, 997, 1012, 1013, 1015, 1320, 1330, 1333, 1334, 1335, 1372, 1377, 1388, 1390, 1396, 1397, 1408, 1438, 1439, 1441, 1868, 1964, 2008, 2142, 2144, 2149, 2300, 2305, 2325, 2411, 2433, 2498, 2502, 2566, 2584, 2586, 2589, 2590, 2677, 2878, 3374, 3604, 3775, 3876 PubMed: 30809012 DOI: 10.1038/s41396-019-0377-0 |
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Toxicity of silver nanocolloids to Raphidocelis subcapitata.
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Quantitative analysis of tip growth, phototropic responses, and other blue light-dependent photoresponses of Vaucheria.
In Phototropism, Part of the Methods in Molecular Biology book series, Ed. by Yamamoto, K. T., Humana Press, New York, NY,
1924,
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Keywords: Apical expansion; Aureochrome; Blue light; Branching; Ca2+ ion; Coenocyte; Lightgrowth response; Negative phototropism; Polarotropism; Positive phototropism; Split-field illumination method; Unilateral illumination method; Vaucheria Strain(s): 2614, 2615 PubMed: 30694469 DOI: 10.1007/978-1-4939-9015-3_8 |
Kataoka, T., Homma, T., Nakano, S., Hodoki, Y., Ohbayashi, K., Kondo, R.
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PCR primers for selective detection of intra-species variations in the bloom-forming cyanobacterium, Microcystis.
Harmful Algae,
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Keywords: Microcystis aeruginosa; Quantitative PCR; 16S-23S rDNA ITS fegion; Selective detection; Intra-species variation Strain(s): 44, 87, 90, 98, 101, 102, 103, 107, 111, 112, 298, 604, 1062, 1070 DOI: 10.1016/j.hal.2012.12.003 |
Kato, A., Morita, N., Hiratsuka, T., Suda, S.
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Recent introduction of a freshwater red alga Chantransia macrospora (Batrachospermales, Rhodophyta) to Okinawa, Japan.
Aquat. Invasions,
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Keywords: Audouinella; Batrachospermum; Chantransia macrospora; freshwater algae; introduced species; macroalgae Strain(s): 2636 DOI: 10.3391/ai.2009.4.4.1 |
Kato, A., Obokata, J., Sasaki, K.
1981
Mating type interaction in Closterium peracerosum-strigosum-littorale: mating induced protoplast release.
Plant Cell Physiol.,
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Keywords: Closterium peracerosum-strigosum-littorale; conjugation; disruped cell; mating type interaction; protoplast release Strain(s): 64, 65 DOI: 10.1093/oxfordjournals.pcp.a076273 |
Kato, A., Ohmura, K., Kanazawa, H., Sasaki, K.
1983
Natural and artificial production of protoplasts from heterothallic and homothallic Closterium.
J. Fac. Sci., Hokkaido Univ., Ser. V (Bot.),
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Kato, A., Sasaki, K.
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Effects of tunica-mycin on sexual reproduction in heterothallic strains of Closterium.
J. Fac. Sci., Hokkaido Univ., Ser. V (Bot.),
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Kato, S., Higuchi, S., Kondo, Y., Kitano, S., Nozaki, H., Tanaka, J.
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Rediscovery of the wild-extinct species Nitellopsis obtusa (Charales) in Lake Kawaguchi, Japan.
J. Jpn. Bot.,
80,
84-91.
Keywords: Charales; Nitellopsis; rbcL gene; rediscovery; wild-extinct species Strain(s): 1638 |
Kato, S., Sakayama, H., Sano, S., Kasai, F., Watanabe, M. M., Tanaka, J., Nozaki, H.
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Morphological variation and intraspecific phylogeny of the ubiquitous species Chara braunii (Charales, Charophyceae) in Japan.
Phycologia,
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Keywords: aquatic habitat; Chara braunii; Charales; Charophyceae; intergenic spacer region; intraspecific phylogeny; morphological variation, rbcL gene Strain(s): 1586, 1587, 1588, 1589, 1590, 1591, 1593, 1604 DOI: 10.2216/07-27.1 |
Kato, T., Watanabe, M. F., Watanabe M.
1991
Allozyme divergence in Microcystis (Cyanophyceae) and its taxonomic inference.
Algol. Stud.,
64,
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Keywords: cyanophytes/cyanobacteria; Microcystis; allozyme divergence; allozyme genotype; allozyme study; cell size; molecular taxonomy Strain(s): 1055, 1058, 1061, 1063, 1064, 1067, 1068, 1070, 1071, 1074, 1077, 1079, 1081, 1084, 1086, 1090, 1091, 1093, 1095, 1097, 1098 |
Kato, T., Watanabe, M. F., Watanabe, M., Hara, Y.
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Allozyme genotype and toxin omposition of the Microcystis strains from Lake Okutama-ko (1).
Bull. Natn. Sci. Mus., Tokyo, Ser.
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Kato, Y., Imamura, N.,
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Effect of calcium ion on uptake of amino acids by symbiotic Chlorella F36-ZK isolated from Japanese Paramecium bursaria.
Plant Sci.,
174,
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Keywords: Paramecium bursaria; Chlorella; Calcium; Divalent cation; Amino acid transport; Symbiosis Strain(s): 227, 2157, 2540 DOI: 10.1016/j.plantsci.2007.10.001 |
Kato, Y., Ueno, S., Imamura, N.
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Studies on the nitrogen utilization of endosymbiotic algae isolated from Japanese Paramecium bursaria.
Plant Sci.,
170,
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Keywords: Endosymbiont; Paramecium bursaria; Nitrogen utilization; Chlorella Strain(s): 227, 2540, 2541 DOI: 10.1016/j.plantsci.2005.09.018 |
Katoh, H., Furukawa, J., Tomita-Yokotani, K. and Nishi
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Isolation and purification of an axenic diazotrophic drought-tolerant cyanobacterium, Nostoc commune, from natural cyanobacterial crusts and its utilization for field research on soils polluted with radioisotopes.
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Keywords: Cyanobacterium; Nostoc commune; Desiccation; Radiation; Space agriculture Strain(s): 2114 PubMed: 22417797 DOI: 10.1016/j.bbabio.2012.02.039 |
Katoh, H., Shiga, S., Nakahira, Y., Ohmori, M.
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Isolation and characterization of drought-tolerant cyanobacterium Nostoc sp. HK-01.
Microbes Environ.,
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Katoh, T., Gantt, E.
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Photosynthetic vesicles with bound phycobilisomes from Anbaena variabilis.
Biochim. Biophys. Acta,
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Katoh, T., Hirokawa, T., Miyachi, S.
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Effect of pre-illumination upon the Hill reaction in Chlorella cells.
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Phylogenetic analysis of NAP, an unconventional actin of the Volvocales.
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Phylogenetic analysis of NAP, an unconventional actin of the Volvocales.
Plant Syst. Evol.,
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Kato-Minoura, T., Okumura, M., Hirono, M., Kamiya, R.
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A novel family of unconventional actins in Volvocalean algae.
J. Mol. Evol.,
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Katsuda, T., Lababpour, A., Shimahara, K., Katoh, S.
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Astaxanthin production by Haematococcus pluvialis under illumination with LEDs.
Enzyme Microb. Technol.,
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Katsuda, T., Shimahara, K., Shiraishi, H., Yamagami, K., Ranjbar, R., Katoh, S.
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Effect of flashing light from blue light emitting diodes on cell growth and astaxanthin production of Haematococcus pluvialis.
J. Biosci. Bioeng.,
102,
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Katsuda, T., Shiraishi, H., Ishizu, N., Ranjbar, R., Katoh, S.
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Effect of light intensity and frequency of flashing light from blue light emitting diodes on astaxanthin production by Haematococcus pluvialis.
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Validation of rapid algal bioassay using delayed fluorescence in an interlaboratory ring study.
Sci. Total Environ.,
605-606,
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Katsumata, M., Koike, T., Nishikawa, M., Kazumura, K., Tsuchiya, H.
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Rapid ecotoxicological bioassay using delayed fluorescence in the green alga Pseudokirchneriella subcapitata.
Water Res.,
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Kawachi, M., Kataoka, T., Sato, M., Noël, M.-H., Kuwata, A., Demura, M., Yamaguchi, H.
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Application of cryopreservation to genetic analyses of a photosynthetic picoeukaryote community.
Gene,
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Kawafune K., Hongoh, Y., Hamaji, T ., Sakamoto, T., Kurata, T., Hirooka, S., Miyagishima, S., Nozaki, H.
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Two different rickettsial bacteria invading Volvox carteri.
PLoS One,
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Kawafune, K., Hongoh, Y., Hamaji, T., Nozaki, H.
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Molecular identification of rickettsial endosymbionts in the non-phagotrophic Volvocalean green algae.
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Isolation and characterization of Noctiluca-killing bacteria from a shrimp aquaculture pond in Thailand.
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Comparative physiology and biochemistry and taxonomic assignment of the Chlorella (Chlorophyceae) strains of the Culture Collection of the University of Texas at Austin.
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Recent advances in biorefinery of astaxanthin from Haematococcus pluvialis.
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Rapid molecular identification of the harmful freshwater dinoflagellate Peridinium in various life stages using genus-specific single-cell PCR.
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Simple, rapid and cost-effective method for high quality nucleic acids extraction from different strains of Botryococcus braunii.
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Chlorella sorokiniana HS1, a novel freshwater green algal strain, grows and hyperaccumulates lipid droplets in seawater salinity.
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Extremely high level of reactive oxygen species (ROS) production in a newly isolated strain of the dinoflagellate Karenia mikimotoi.
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Toxic potential of the raphidophyte Olisthodiscus luteus: mediation by reactive oxygen species.
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Galacturonic-acid-induced increase of superoxide production in red tide phytoplankton Chattonella marina and Heterosigma akashiwo.
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Possible involvement of the glycocalyx in the ichthyotoxicity of Chattonella marina (Raphidophyceae): immunological approach using antiserum against cell surface structures of the flagellate.
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Specific toxic effect of dinoflagellate Heterocapsa circularisquama on the rotifer Brachionus plicatilis.
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Production of superoxide anion and hydrogen peroxide associated with cell growth of Chattonella antiqua.
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Kim, D., Waranabe, M., Nakayasu, Y., Kohata, K.
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Changes in O2- and H2O2 production by Chattonella antiqua during diel vertical migration under nutrient stratification.
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Kim, E., Graham, L. E.
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EEF2 analysis challenges the monophyly of Archaeplastida and Chromalveolata.
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Evolutionary relationships of apusomonads inferred from taxon-rich analyses of nuclear encoded genes.
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Phylogenetic position of the green flagellate Mesostigma viride based on alpha-tubulin and beta-tubulin gene sequences.
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Multigene analyses of photosynthetic euglenoids and new family, Phacaceae (Euglenales).
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Molecular probes to evaluate the synthesis and production potential of an odorous compound (2-methylisoborneol) in cyanobacteria.
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A close relationship between algicidal bacteria and termination of Heterosigma akashiwo (Raphidophyceae) blooms in Hiroshima Bay, Japan.
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Decontamination of low-level contaminated water from radioactive cesium and cobalt using microalgae.
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Enhancement of astaxanthin production by Haematococcus pluvialis using magnesium aminoclay nanoparticles.
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Chloroplast small-subunit ribosomal RNA gene sequence from Chlamydomonas parkeae (Chlorophyta) : molecular phylogeny of a green alga with a peculiar pigment composition.
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Morphological and molecular identification of the dioecious “African species Volvox rousseletii (Chlorophyceae) in the water column of a Japanese lake based on field-collected and cultured materials.
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Carbonic anhydrase in Chlamydomonas reinhardtii I. Localization.
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Isolation and characterization of a single-stranded DNA virus infecting the marine planktonic diatom Chaetoceros sp. strain SS628-11 isolated from western Japan.
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Nutrient removal from anaerobic digestion effluents of aquatic macrophytes with the green alga, Chlorella sorokiniana.
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Evoluation of a cyanobacterium, Nostoc sp. HK-01, as food material for space agriculture on Mars.
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The ultrastructure of contractile tubules in the heliozoan Actinophrys sol and their possible involvement in rapid axopodial contraction.
J. Eucaryot. Microbiol.,
48,
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1995
Ultrastructure and rapid axopodial contraction of a heliozoan, Raphidiophyrys contractilis sp. nov.
J. Eucaryot. Microbiol.,
42,
283-288.
Keywords: Contraction; Heliozoa; microtubule pattern; new species; Raphidiophyrys; silicic scale; X-ray microanalysis Strain(s): 2498, 3374 DOI: 10.1111/j.1550-7408.1995.tb01581.x |
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A possibility of control and prevention of excessive phytoplankton growth by photochromism.
J. Jpn. Soc. Wat. Environ.,
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Biofilm cultivation of Haematococcus pluvialis enables a highly productive one-phase process for astaxanthin production using high light intensities.
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Heterotrophic utilization of ethylene glycol and propylene glycol by Chlorella protothecoides.
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Radiative transfer model for satellite remote sensing of ocean colors in coastal zones.
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In vivo antioxidant role of astaxanthin under oxidative stress in the green alga Haematococcus pluvialis.
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Endopolyploidy in Chlorella.
Arch. Mikrobiol.,
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Abscisic acid-dependent algal morphogenesis in the unicellular green alga Haematococcus pluvialis.
Plant Growth Regulation,
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Keywords: abscisic acid; active oxygen; carotenoid; cyst formation; drought stress; Haematococcus pluvialis Strain(s): 144 DOI: 10.1023/A:1005862809711 |
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Astaxanthin production by a green alga, Haematococcus pluvialis accompanied with morphological changes in acetate media.
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Enhanced carotenoid biosynthesis by oxidative stress in acetate-induced cyst cells of a green unicellular alga, Haematococcus pluvialis.
Appl. Environ. Microbiol.,
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Photo-dependent astaxanthin biosynthesis in a green alga, Haematococcus pluvialis.
Seibutsu-Kôgaku,
71,
233-237 (in Japanese with English summary).
Strain(s): 144 |
Kobayashi, M., Kakizono, T., Nishio, N., Nagai, S.
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Effects of light intensity, light quality, and illumination cycle on astaxanthin formation in a green alga, Haematococcus pluvialis.
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61-63.
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Antioxidant role of astaxanthin in the green alga Haematococcus pluvialis.
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Kobayashi, M., Kakizono, T., Yamaguchi, K., Nishio, N., Nagai, S.
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Growth and asta-xanthin formation of Haematococcus pluvialis in heterotrophic and mixotrophic conditions.
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Kobayashi, M., Kurimura, Y., Kakizono, T., Nishio, N., Tsuji, Y.
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Morphological changes in the life cycle of the green alga Haematococcus pluvialis.
J. Ferment. Bioeng.,
84,
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Keywords: astaxanthin; encystment; germination; Haematococcus pluvialis; life cycle; maturation Strain(s): 144 DOI: 10.1016/S0922-338X(97)82794-8 |
Kobayashi, M., Kurimura, Y., Sakamoto, Y., Tsuji, Y.
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Selective extraction of astaxanthin and chlorophyll from the green alga Haematococcus pluvialis.
Biotechnol. Tech.,
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Light-independent, astaxanthin production by the green microalga Haematococcus pluvialis under salt stress.
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Protective role of astaxanthin against u.v.-B irradiation in the green alga Haematococcus pluvialis.
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Keywords: antioxidant; astaxanthom; Haematococcus pluvialis oxidative stress; u.v.-B; Strain(s): 144 DOI: 10.1023/A:100564960983 |
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1998
Biological activities of abscisic acid analogs in the morphological change of the green alga Haematococcus pluvialis.
J. Ferment. Bioeng.,
85,
529-531.
Keywords: abscisic acid; astaxanthin; carotenogenesis; drought stress; encystment; plant hormone; Haematococcus pluvialis Strain(s): 144 DOI: 10.1016/S0922-338X(98)80076-7 |
Kobayashi, T. Takahara, M., Miyagishima, S, Kuroiwa, H., Sasaki, N., Ohta, N., Kuroiwa, T.
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Detection and localization of a chloroplast-encoded HU-like protein that may organize chloroplast nucleoids.
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Tetrapyrole signal as a cell cycle coordinator from organelle to nuclear DNA replication in plant cells.
Proc. Nati. Acad. Sci. U. S. A.,
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Kodani, S., Ishida, K., Murakami, M.
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Aeruginosin 103-A, a thrombin inhibitor from the cyanobactrium Microcystis viridis.
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Dehydroradiosumin, a trypsin inhibitor from the cyanobacterium Anabaena cylindrica.
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Occurrence and identification of UDP-N-acetylmuramyl-pentapeptide from the cyanobacterium Anabaena cylindrica.
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Biochemical characterization of allene oxide synthases from the liverwort Marchantia polymorpha and green microalgae Klebsormidium flaccidum provides insight into the evolutionary divergence of the plant CYP74 family.
Planta,
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Keywords: Allene oxide synthase; Plant evolution; CYP74; Hydroperoxide lyase; C8 volatiles Strain(s): 2285 PubMed: 26105654 DOI: 10.1007/s00425-015-2355-8 |
Koga, T., Arasaki, T., Tanaka, T., Ueda, S.
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Studies on cell fusion of microalgae, part 2 protoplast induction and regeneration of Chlorella.
Annu. Rep. Kumamoto Kogyo Univ.,
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Strain(s): 685, 2163, 2189 |
Koga, T., Arasaki, T., Tanaka, T., Ueda, S.
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Studies on cell fusion of microalgae, part 3 interspecific cell fusion of Chlorella.
Annu. Rep. Kumamoto Kogyo Univ.,
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Kohata, K., Watanabe, M.
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The use of a controlled experimental ecosystem (Microcosm) in studies of mechanism of red tide outbreaks (II) - Growth of Heterosigma akashiwo, red tide flagellate, in Microcosm.
Res. Rep. Natl. Inst. Environ. Stud.,
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111-121 (in Japanese with English summary).
Strain(s): 6 |
Kohata, K., Watanabe, M.
1986
Synchronous division and the pattern of diel vertical migration of Heterosigma akashiwo (Hada) Hada (Raphidophyceae) in a laboratory culture tank.
J. Exp. Mar. Biol. Ecol.,
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Keywords: cell division; culture tank; DCMU-induced fluorescence; Heterosigma akashiwo; vertical migration Strain(s): 6 DOI: 10.1016/0022-0981(86)90163-2 |
Kohata, K., Watanabe, M.
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The use of a controlled experimental ecosystem (Microcosm) in studies of mechanism of red tide outbreaks (V) - Growth and cell volume change of Heterosigma akashiwo, a red tide flagellate.
Res. Rep. Natl. Inst. Environ. Stud.,
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Strain(s): 6 |
Kohata, K., Watanabe, M.
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The use of a controlled experimental ecosystem (Microcosm) in studies of mechanism of red tide outbreaks (VI) - Diurnal changes of C/N ratio and distribution of chloroplast pigments in the culture of Chattonella antiqua, a red tide flagellate.
Res. Rep. Natl. Inst. Environ. Stud.,
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Strain(s): 1 |
Kohata, K., Watanabe, M.
1987
The use of a controlled experimental ecosystem (Microcosm) in studies of mechanism of red tide outbreaks (VII) - Growth and its mathematical model of Heterosigma akashiwo, a red tide flagellate, in light-limited synchronous cultures.
Res. Rep. Natl. Inst. Environ. Stud.,
No. 110,
79-88 (in Japanese with English summary).
Strain(s): 6 |
Kohata, K., Watanabe, M.
1988
Diel changes in the composition of photosynthetic pigments and cellular carbon and nitrogen in Chattonella antiqua (Raphidophyceae).
J. Phycol.,
24,
58-66.
Keywords: carotenoids; cellular carbon; Chattonella antiqua; chlorophyll; diel change; laboratory culture tank; light-dark cycles Strain(s): 1 DOI: 10.1111/j.1529-8817.1988.tb04456.x |
Kohata, K., Watanabe, M.
1989
Diel changes in the composition of photosynthetic pigments and cellular carbon and nitrogen in Pyramimonas parkeae (Prasinophyceae).
J. Phycol.,
25,
377-385.
Keywords: carotenoids; cellurar carbon; chlorophyll; diel change; laboratory culture tank; light-dark cycles; loroxanthin dodecenoate; Pyremimonas parkeae Strain(s): 254 DOI: 10.1111/j.1529-8817.1989.tb00134.x |
Kohata, K., Watanabe, M. M., Nakamura, Y., Watanabe, M.
1982
Growth and phosphate uptake kinetics in Olisthodiscus luteus: grown on synchronized batch cultures.
Res. Rep. Natl. Inst. Environ. Stud.,
No. 30,
95-111 (in Japanese with English summary).
Strain(s): 6 |
Kohata, K., Watanabe, M., Yamanaka, K.
1991
Highly sensitive determination of photosynthetic pigments in marine in situ samples by high-performance liquid chromatography.
J. Chromatogr. A
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Koike, H., Shibata, M., Yasutomi, K., Kashino, Y., Satoh, K.
2000
Identification of photosystem I components from a glaucocystophyte, Cyanophora paradoxa: The PsaD protein has an N-terminal stretch homologous to higher plants.
Photosynth. Res.,
65,
207-217.
Keywords: Cyanophora paradoxa; glaucocystophyte; light harvesting complex; photosystem I; PsaD; PsaL Strain(s): 547 DOI: 10.1023/A:1010734912776 |
Kojima, E., Yamaguchi, Y.
1988
Photoproduction of hydrogen by adapted cells of Chlorella pyrenoidosa.
J. Ferment. Technol.,
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Strain(s): 685 DOI: 10.1016/0385-6380(88)90124-0 |
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Unique chlorophylls in picoplankton Prochlorococcus sp. “Physicochemical properties of divinyl chlorophylls, and the discovery of monovinyl chlorophyll b as well as divinyl chlorophyll b in the species Prochlorococcus NIES-2086.”
Photosynth. Res.,
130,
445-467.
Keywords: Chlorophyll; Divinyl chlorophyll; Pheophytin; Photosynthesis; Prochlorococcus Strain(s): 2086, 2087, 2884, 3376 PubMed: 27334004 DOI: 10.1007/s11120-016-0283-5 |
Komor, E., Cho, B.-H., Kraus, M.
1988
The occurrence of the glucose-inducible transport systems for glucose, proline, and arginine in different species of Chlorella.
Botanica Acta,
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Keywords: Amino acid transport; induction by glucose; Chlorella; classification Strain(s): 687, 2150 DOI: 10.1111/j.1438-8677.1988.tb00051.x |
Kondo, F., Ikai, Y., Oka, H., Ishikawa, N., Watanabe, M. F., Watanabe, M., Harada, K., Suzuki, M.
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Separation and identification of microcystins in cyanobacteria by frit-fast atom bombardment liquid chromatography / mass spectrometry.
Toxicon,
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Kondo, R., Kagiya, G., Hiroishi, S., Watanabe, M.
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Genetic typing of a bloom-forming cyanobacterial genus Microcystis in Japan using 16S rRNA gene sequence analysis.
Plankton Biol. Ecol.,
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Keywords: genetic typing; 16S rDNA; Microcystis; cyanobacteria; phylogenetic analysis Strain(s): 87, 88, 89, 90, 91, 98, 99, 100, 101, 102, 104, 105, 106, 108, 109, 110, 111, 112, 298, 299, 604, 1055, 1061, 1068, 1076, 1090, 1091, 1105, 1122, 1142, 1164 |
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Rapid DNA extraction from a bloom-forming cyanobacterium.
Microbes Environ.,
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2000
Molecular taxonomy of a bloom-forming cyanobacterial genus Microcystis.
Bull. Plankton Soc. Japan,
47,
25-33 (in Japanese with English summary).
Keywords: cyanobacteria; Microcystis; bacterial criteria; molecular analysis Strain(s): 6, 87, 88, 89, 90, 91, 98, 99, 100, 101, 102, 104, 105, 106, 108, 109, 110, 111, 112, 298, 299, 604, 1055, 1061, 1068, 1076, 1090, 1091, 1105, 1122, 1142, 1164 |
Kondo, R., Kagiya, G., Yuki, Y., Hiroishi, S., Watanabe, M.
1998
Taxonomy of a bloom-forming cyanobacterial genus Microcystis.
Nippon Suisan Gakkaishi,
64,
291-292 (in Japanese with English title).
Strain(s): 87, 88, 89, 90, 91, 98, 99, 100, 101, 102, 104, 105, 106, 107, 108, 109, 110, 111, 112, 298, 299, 604 |
Kondo, R., Komura, M., Hiroishi, S., Hata, Y.
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Detection and 16S rDNA sequence analysis of a bloom-forming cyanobacterial genus Microcystis.
Fish. Sci.,
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Keywords: Microcystis; 16S rDNA; PCR Strain(s): 107, 112 DOI: 10.2331/fishsci.64.840 |
Kondo, R., Okamura, T.
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Growth and grazing kinetics of the facultative anaerobic nanoflagellate, Suigetsumonas clinomigrationis.
Microbes Environ.,
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Keywords: anaerobic flagellate; growth rate; ingestion rate; Lake Suigetsu Strain(s): 3647 PubMed: 28190796 DOI: 10.1264/jsme2.ME16113 |
Kondo, R., Yoshida, T., Yuki, Y., Hiroishi, S.
2000
DNA-DNA reassociation among a bloom-forming cyanobacterial genus, Microcystis.
Int. J. Syst. Evol. Microbiol.,
50,
767-770.
Keywords: DNA hybridization; DNA G+C content; cyanobacteria; Microcystis Strain(s): 87, 89, 98, 102, 104, 111, 112, 298, 604 |
Kong, F., Yamasaki, T., Kurniasih, S. D., Hou, L., Li, X., Ivanova, N., Okada, S., Ohama, T.
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Robust expression of heterologous genes by selection marker fusion system in improved Chlamydomonas strains.
Biotech. Bioeng.,
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Keywords: Transgene silencing; Position effect; Squalene synthase-like gene; Botryococcus braunii; Methyltransferase gene Strain(s): 2235 PubMed: 25660568 DOI: 10.1016/j.jbiosc.2015.01.005 |
Konno, R., Wakabayashi, A.
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Effects of chemical substance on the growth of algae [Sôrui no zôsyoku ni oyobosu kagakubusshitsu no eikyô].
Tokyo-to Kankyô Kagaku Kenkyûjo Nenpô. 1987,
4 pp. (in Japanese).
Strain(s): 35 |
Kooistra, W. H. C. F., Sarno, D., Balzano, S., Gu, H., Andersen, R. A., Zingone, A.
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Global diversity and biogeography of Skeletonema species (Bacillariophyta).
Protist,
159,
177-193.
Keywords: biogeography; cryptic species; distribution; LSU rDNA; phytoplankton; Skeletonema costatum Strain(s): 16, 17, 223, 323, 324 PubMed: 18042429 DOI: 10.1016/j.protis.2007.09.004 |
Koskenniemi, K., Lyra, C., Rajaniemi-Wacklin, P., Jokela, J., Sivonen, K.
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Quantitative real-time PCR detection of toxic Nodularia cyanobacteria in the Baltic Sea.
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Kotzabasis, K., Schuering, M., Senger, H.
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Occurrence of protochlorophyll and its phototransformation to chlorophyll in mutant C-2A' of Scenedesmus obliquus.
Physiol. Plant.,
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Keywords: green algae; phototransformation; protochlorophyllide; protochlorophyllide reductase; Scenedesmus obliquus Strain(s): 2280 DOI: 10.1111/j.1399-3054.1989.tb06172.x |
Koumura, Y., Suzuki, T., Yoshikawa, S., Watanabe, M., Iseki, M.
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The origin of photoactivated adenylyl cyclase (PAC), the Euglena blue-light receptor: phylogenetic analysis of orthologues of PAC subunits from several euglenoids and trypanosome-type adenylyl cyclases from Euglena gracilis.
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Nitrogen flux into metabolites and microcystins changes in response to different nitrogen sources in Microcystis aeruginosa NIES‐843.
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Krienitz, L., Bock, C., Nozaki, H., Wolf, M.
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SSU rRNA gene phylogeny of morphospecies affiliated to the bioassay alga "Selenastrum capricornutum" recovered the polyphyletic origin of crescent-shaped Chlorophyta.
J. Phycol.,
47,
880-893.
Keywords: Kirchneriella; Neocystis mucosa sp. nov..; Nephrochlamys; Raphidocelis; Rhombocystis; Selenastrum; SSU rRNA gene phylogeny; taxonomy; Tetranephris; ultrastructure Strain(s): 2708, 2709, 2710, 2711, 2712, 2713, 2714 PubMed: 27020023 DOI: 10.1111/j.1529-8817.2011.01010.x |
Krupnik, T., Kotabová, E., van Bezouwen, L. S., Mazur, R., Garstka, M., Nixon, P. J., Barber, J., Kaňa, R., Boekema, E. J., Kargul, J.
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A reaction center-dependent photoprotection mechanism in a highly robust photosystem II from an extremophilic red alga, Cyanidioschyzon merolae.
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Krupnik, T., Wasilewska, W., Drożak, A., Romanowska, E., Zienkiewicz, M.
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Application of chloroplast promoters of Cyanidioschyzon merolae for exogenous protein expression.
Algae,
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Comparison of growth and lipid content in three Botryococcus braunii strains.
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Thermosynechococcaceae as a source of thermostable C-phycocyanins: properties and molecular insights.
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Feeding by the harmful phototrophic dinoflagellate Takayama tasmanica (Family Kareniaceae).
Harmful Algae,
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Genetic diversity and molecular phylogeny of Planktothrix (Oscillatoriales, cyanobacteria) strains from China.
Harmful Algae,
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Crystal structure of allophycocyanin from red algae Porphyra yezoensis at 2.2-angstrom resolution.
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Algicidal characterization and mechanism of Bacillus licheniformis Sp34 against Microcystis aeruginosa in Dianchi Lake.
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Molecular cloning and expression analysis of a cytosolic Hsp70 gene from Antarctic ice algae Chlamydomonas sp. ICE-L.
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Effects of nutrients, salinity, pH and light: dark cycle on the production of reactive oxygen species in the alga Chattonella marina.
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Effects of temperature on life history traits of Eodiaptomus japonicus (Copepoda: Calanoida) from Lake Biwa (Japan).
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Conditions for continuous cultivation of Chlorella sorokiniana and nutrient removal from anaerobic digestion effluent of aquatic macrophytes.
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Effects of acclimatization on metabolic plasticity of Eodiaptomus japonicus (Copepoda: Calanoida) determined using an optical oxygen meter.
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A comparison of the mussel Anodonta woodiana's acute physiological responses to different algae diets.
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Possible survival mechanisms of Sinanodonta woodiana exposed to microcystin.
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Enhancement of linoleic acid content stimulates astaxanthin esterification in Coelastrum sp.
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