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Keywords: Anabaena variabilis; CO2 accumulation; cyanobacterial growth; photosynthesis; sodium Strain(s): 2093 DOI: 10.1093/oxfordjournals.pcp.a077343 |
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Isolation and structure determination of algicidal compounds from Ulva fasciata.
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Properties of dissolved organic carbon (DOC) released by three species of blue-green algae.
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Photoalteration of dissolved organic matter (DOM) released from Microcystis aeruginosa in different growth phases: DOM-fraction distribution and biodegradability.
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Development of large-scale and economic pH control system for outdoor cultivation of microalgae Haematococcus pluvialis using industrial flue.
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Morphology, genetic diversity, temperature tolerance and toxicity of Cylindrospermopsis raciborskii (Nostocales, Cyanobacteria) strains from Thailand and Japan.
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Application of methods for assessing the geno- and cytotoxicity of Triclosan to C. ehrenbergii.
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PhytoREF: a reference database of the plastidial 16S rRNAgene of photosynthetic eukaryotes with curated taxonomy.
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Algal ancestor of land plants was preadapted for symbiosis.
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Linking pangenomes and metagenomes: the Prochlorococcus metapangenome.
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2007
Development of microsatellite markers for the red tide-forming harmful species Chattonella antiqua, C. marina, and C. ovata (Raphidophyceae).
Mol. Ecol. Notes,
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Genetic structure of Japanese Chattonella marina (Raphidophyceae) populations revealed using microsatellite markers.
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Keywords: Chattonella marina var. antiqua; Chattonella marina var. marina; genetic structure; isolation by distance; microsatellite marker; population genetics Strain(s): 1, 2, 3, 14, 83, 84, 85, 86, 113, 114, 115, 116, 118, 121, 161, 557, 1974, 1975, 1976, 1977, 1978, 1980, 1981, 1982, 1983, 1984, 2383, 2384, 2385, 2386, 2387, 2388, 2389, 2390, 2391, 2392, 2393, 2394, 2395, 2396, 2397, 2398, 2399, 2400, 2401, 2402, 2403, 2404, 2405, 2406, 2407, 2509, 2510, 2511, 2512, 2513, 2514, 2515, 2516, 2517, 2518 DOI: 10.1111/pre.12047 |
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Taxonomic revision of Chattonella antiqua, C. marina and C. ovata (Raphidophyceae) based on their morphological characteristics and genetic diversity.
Phycologia,
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Keywords: Chattonella antiqua; Chattonella marina; Chattonella ovata; COI; COX1; Genetic diversity; ITS; Microsatellite; Morphology; Phylogeny; Population; Raphidophyceae; rbcL; Speciation; Taxonomy Strain(s): 1, 2, 3, 5, 6, 9, 10, 14, 83, 84, 85, 113, 114, 116, 118, 146, 161, 293, 557, 561, 603, 671, 716, 849, 1974, 1975, 1976, 1977, 1978, 1980, 1981, 1982, 1983, 1984, 1986, 2383, 2384, 2385, 2386, 2387, 2388, 2389, 2391, 2392, 2393, 2394, 2395, 2396, 2397, 2398, 2399, 2400, 2401, 2402, 2403, 2404, 2405, 2406, 2407 DOI: 10.2216/08-98.1 |
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Monophyly of the genus Closterium and the order Desmidiales (Charophyceae, Chlorophyta) inferred from nuclear small subunit rDNA data.
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Keywords: Charophyceae; Closterium; desmid; molecular phylogeny; placoderm; SSU rDNA; Zygnematales Strain(s): 52, 125, 165, 170, 174, 175, 180, 181, 185, 187, 188, 191, 194, 198, 199, 200, 271, 339, 449 DOI: 10.1046/j.1529-8817.2001.00146.x |
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Denboh, T., Ichimura, T., Hendrayanti, D., Coleman, A. W.
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Closterium moniliferum-ehrenbergii (Charophyceae, Chlorophyta) species complex viewed from the 1506 Group I intron and ITS2 of nuclear rDNA.
J. Phycol.,
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Keywords: biological species; Closterium; group I introns; ITS2; mating group; molecular phylogeny; speciation Strain(s): 172, 173, 174, 182, 183, 228, 229 DOI: 10.1046/j.1529-8817.2003.02145.x |
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Naked Chrysochromulina (Haptophyta) isolates from lake and river ecosystems: An electron microscopic comparison including new observations on the type species of this taxon.
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Comparative ecophysiology of the xanthophyll cycle in six marine phytoplanktonic species.
Protist,
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Dimier, C., Giovanni, S., Ferdinando, T., Brunet, C.
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Blue light induction of carbonic anhydrase activity in Chlamydomonas reinhardtii.
Plant Cell Physiol.,
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Keywords: blue light; carbonic anhydrase; Chlamydomonas reinhardtii; enzyme induction; photoreceptor Strain(s): 2235 DOI: 10.1093/oxfordjournals.pcp.a077732 |
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Dionisio, M. L., Tsuzuki, M., Miyachi, S.
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Light requirement for carbonic anhydrase induction in Chlamydomonas reinhardtii.
Plant Cell Physiol.,
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Keywords: blue light; carbonic anhydrase; Chlamydomonas reinhardtii; enzyme induction; light intensity Strain(s): 2235 DOI: 10.1093/oxfordjournals.pcp.a077731 |
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Light-induced carbonic anhydrase expression in Chlamydomonas reinhardtii.
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Keywords: carbonic anhydrase; Cl- activation; Cl- inhibition; marine microalgae; NaCl effect; photosynthesis Strain(s): 2168 DOI: 10.1111/j.0022-3646.1992.00619.x |
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Molecular probes for the detection and identification of ichthyotoxic marine microalgae of the genus Pseudochattonella (Dictyochophyceae, Ochrophyta).
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Keywords: Harmful algae; Dot blot hybridizations; PCR assays; DNA microarrays; Quantitative real-time PCR Strain(s): 670 PubMed: 23361173 DOI: 10.1007/s11356-012-1402-2 |
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Influence of environmental and nutritional factors in the production of astaxanthin from Haematococcus pluvialis.
Bioresour. Technol.,
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Keywords: Haematococcus; Astaxanthin production; Light intensity; Aeration Strain(s): 144 DOI: 10.1016/j.biortech.2003.04.001 |
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Domínguez-Bocanegra, A. R., Ponce-Noyola, T., Torres-Muñoz, J. A.
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Astaxanthin production by Phaffia rhodozyma and Haematococcus pluvialis: a comparative study.
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Quantitative proteomics shows extensive remodeling induced by nitrogen limitation in Prochlorococcus marinus SS120.
mSystems.,
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Linking chemistry and genetics in the growing cyanobactin natural products family.
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Dorantes-Aranda, J. J., Nichols, P. D., Waite, T. D., Hallegraeff, G. M.
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Strain variability in fatty acid composition of Chattonella marina (Raphidophyceae) and its relation to differing ichthyotoxicity toward rainbow trout gill cells.
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Principles of plastid reductive evolution illuminated by nonphotosynthetic chrysophytes.
Proc. Natl. Acad. Sci. U. S. A.,
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Evolution of chloroplast transcript processing in Plasmodium and its chromerid algal relatives.
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Driscoll, C. B., Meyer, K. A., Šulčius, S., Brown, N. M., Dick, G. J., Cao, H., Gasiūnas, G., Timinskas, A., Yin, Y., Landry, Z. C., Otten, T. G., Davis, T. W., Watson, S. B., Dreher, T. W.
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Harmful Algae,
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Simultaneous removal of phosphorus and nitrogen in a sequencing batch biofilm reactor with transgenic bacteria expressing polyphosphate kinase.
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Accelerated evolution associated with genome reduction in a free-living prokaryote.
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Utilization of cyanobacterial biomass from water bloom for bioproduction of lactic acid.
World J. Microbiol. Biotech.,
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Keywords: cyanobacterium; CO2 supplementation; lactic acid; Lactobacillus agilis; L. amylovorus; L. ruminis; starch; water bloom Strain(s): 23, 44 DOI: 10.1023/A:1016638619 |
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Dziga, D., Tokodi, N., Backović, D. D., Kokociński, M., Antosiak, A., Puchalski, J., Strzałka, W., Madej, M., Meriluoto, J., Svirčev, Z.
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The effect of a combined hydrogen peroxide-MlrA treatment on the phytoplankton community and microcystin concentrations in a mesocosm experiment in Lake Ludoš.
Toxins,
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725 (article ID).
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Verrucophora farcimen gen. et sp nov (Dictyochophyceae, Heterokonta) - A bloom-forming ichthyotoxic flagellate from the Skagerrak, Norway.
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Keywords: carotenoids; Chattonella; Dictyochophyceae; harmful algae; LSU rDNA; new taxon; phylogeny; SSU rDNA; ultrastructure Strain(s): 670 DOI: 10.1111/j.1529-8817.2007.00390.x |
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Ribosomal DNA phylogenies and a morphological revision provide the basis for a revised taxonomy of the Prymnesiales (Haptophyta).
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Comprehensive molecular phylogenetic analysis of a heterokont alga (NIES 548) using genes from all three cellular compartments.
Phycol. Res.,
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Keywords: cytochrome oxydase subunit I; Phaeophyceae; Tribonema; Xanthophyceae Strain(s): 548 DOI: 10.1046/j.1440-1835.1999.00166.x |
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Ehara, M., Watanabe, K. I., Kawai, H., Inagaki, Y., Hayashi-Ishimaru, Y., Ohama, T.
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Distribution of the mitochondrial deviant genetic code AUA for methionine in heterokont algae.
J. Phycol.,
34,
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Keywords: cytochrome oxydase subunit I; deviant genetic code; heterokont algae; Phaeophyceae; Xanthophyceae Strain(s): 1 DOI: 10.1046/j.1529-8817.1998.341005.x |
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Ehara, T., Ogasawara, Y., Osafune, T.
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Behavior of chloroplast nucleoids during the cell cycle of Chlamydomonas reinhardtii (Chlorophyta) in synchronized culture.
J. Phycol.,
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Keywords: cell cycle; Chlamydomons; chloroplast division; DAPI; nucleoid Strain(s): 2235 DOI: 10.1111/j.0022-3646.1990.00317.x |
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Ehara, T., Osafune, T., Hase, E.
1985
Interactions between the nucleus and cytoplasmic organelles durihg the cell cycle of Euglena gracilis in synchronized cultures. III. Associations between the nucleus and chloroplasts at an early stage of the cell cycle under photoorganotrophic conditions (part II).
Plant Cell Physiol.,
26,
1155-1165.
Keywords: cell cycle; chloroplast-nucleus association; chloroplast-nucleoid; Euglena gracilis; three-dimensional chloroplast model Strain(s): 48 |
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Ehara, T., Osafune, T., Hase, E.
1990
Interactions between the nucleus and cytoplasmic organelles during the cell cycle of Euglena gracilis in synchronized cultures.
Exp. Cell Res.,
190,
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Strain(s): 48 DOI: 10.1016/0014-4827(90)90150-9 |
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Ehara, T., Shihira-Ishikawa, I., Osafune, T., Hase, E., Ohkuro, I.
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Some structural characteristics of chloroplast degeneration in cells of Euglena gracilis Z during their heterotrophic growth in darkness.
J. Electron Microscopy,
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Ehara, T., Sumida, S., Osafune, T.
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Interactions between the nucleus and cytoplasmic organelles during the cell cycle of Euglena gracilis in cynchronized cultures. I. Associations between the nucleus and chloroplasts at an early stage in the cell cycle under photoorganotrophic conditions (Part I).
Plant Cell Physiol.,
25,
1133-1146.
Keywords: cell cycle; chloroplast-nucleus association; chloroplast-nucleoid; chromosome; Euglena gracilis Strain(s): 48 |
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Eikrem, W., Romari, K., Latasa, M., Le Gall, F., Throndsen, J., Vaulot, D.
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Florenciella parvula gen. et sp. nov. (Dictyochophyceae, Heterokontophyta), a small flagellate isolated from the English Channel.
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Comparative studies on algal toxicity testing using fluorometric microplate and Erlenmeyer flask growth-inhibition assays.
Ecotox. Environ. Safe.,
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Keywords: Algal growth-inhibition assay; Algal quantification; In vivo chlorophyll fluorescence; Testing volumina; Microplate; Evaluation parameters; Toxicological endpoints; EC value; Reference toxicants Strain(s): 4282 PubMed: 12651191 DOI: 10.1016/S0147-6513(02)00099-4 |
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Glutamine synthetase from the marine cyanobacteria Prochlorococcus spp.; characterization, phylogeny and response to nutrient limitation.
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Fottea,
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169-177.
Keywords: evolution; Marvania; Stichococcus; phylogeny; Trebouxiophyceae; 18S rRNA Strain(s): 996 |
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Analysis of genomic sequences encoding a sex pheromone from the Closterium peracerosum-strigosum-littorale complex.
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Development of a qPCR assay to detect and quantify ichthyotoxic flagellates along the Norwegian coast, and the first Norwegian record of Fibrocapsa japonica (Raphidophyceae).
Harmful Algae,
75,
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Keywords: Karenia mikimotoi; Karlodinium veneficum; Heterosigma akashiwo; Molecular monitoring; rDNA; 454 high throughput environmental; sequencing; SEM Strain(s): 15 PubMed: 29778220 DOI: 10.1016/j.hal.2018.04.007 |
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Cryptomonads from the Sugadaira-Moor, Central Japan.
Bull. Sugadaira Mont. Res. Center, Univ. Tsukuba,
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Strain(s): 706, 713, 714, 715 |
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Erata, M., Chihara, M.
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Re-examination of Pyrenomonas and Rhodomonas (Class Cryptophyceae) through ultrastructural survey of red pigmented cryptomonads.
Bot. Mag. Tokyo,
102,
429-443.
Keywords: nucleomorph; periplastidal compartment; Pyrenomonas; Rhodomonas Strain(s): 697, 698, 699, 700, 701, 702, 705, 706 DOI: 10.1007/BF02488125 |
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Cryptomonads of Japan (2) three species of Chroomonas.
J. Jpn. Bot.,
66,
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Ultrastructure and phototactic action spectra of two genera of cryptophyte flagellate algae, Cryptomonas and Chroomonas.
Protoplasma,
188,
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Rapid typing and elucidation of new secondary metabolites of intact cyanobacteria using MALDI-TOF mass spectrometry.
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Improving phylogenetic inference of core Chlorophyta using chloroplastsequences with strong phylogenetic signals and heterogeneous models.
Mol. Phylogenet. Evol.,
127,
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2011
Taxonomy and phylogeny of Nephroselmis clavistella sp. nov. (Nephroselmidophyceae, Chlorophyta).
J. Phycol.,
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Keywords: molecular phylogeny; morphology; Nephroselmidophyceae; Nephroselmis clavistella sp. nov.; scale morphology; taxonomy; ultrastructure Strain(s): 2867 PubMed: 27020363 DOI: 10.1111/j.1529-8817.2011.01059.x |
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1991
Disjunct distribution of the xanthophyll loroxanthin in the green algae (Chlorophyta).
J. Phycol.,
27,
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Keywords: carotenoids; Chlorophyta; high-performance liquid chromatography; loroxanthin; xanthophylls Strain(s): 2285 DOI: 10.1111/j.0022-3646.1991.00544.x |
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2018
The 4-celled Tetrabaena socialis nuclear genome reveals the essential components for genetic control of cell number at the origin of multicellularity in the volvocine lineage.
Mol. Biol. Evol.,
35,
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Keywords: Volvocines; multicellularity; Tetrabaena socialis; evolutionary genomics Strain(s): 571 PubMed: 29294063 DOI: 10.1093/molbev/msx332 |
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Featherston, J., Arakaki, Y., Nozaki, H., Durand, P. M., Smith, D. R.
2016
Inflated organelle genomes and a circularmapping mtDNA probably existed at the origin of coloniality in volvocine green algae.
Eur. J. Phycol.,
51,
369-377.
Keywords: Genome expansion; green microalga; mitochondrial DNA; plastid DNA; Tetrabaena socialis; Volvocine algae Strain(s): 571 DOI: 10.1080/09670262.2016.1198830 |
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Feinstein, T. N., Traslavina, R., Sun, M.-Y., Lin, S.
2002
Effects of light on photosynthesis, grazing, and population dynamics of the heterotrophic dinoflagellate Pfiesteria piscicida (Dinophyceae).
J. Phycol.,
38,
659-669.
Keywords: cannibalism; grazing; growth; kleptoplastidy; light; Pfiesteria piscicida Strain(s): 1730 DOI: 10.1046/j.1529-8817.2002.01175.x |
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Feng, S., Liu, F., Zhu, S., Feng, P., Wang, Z., Yuan, Z., Shang, C., Chen, H.
2020
Performance of a microalgal-bacterial consortium system for the treatmentof dairy-derived liquid digestate and biomass production.
Bioresour. Technol.,
306,
123101 (article ID).
Keywords: Liquid digestate; C. vulgaris; Pollutant removal; Biomass production; Bacterial community analysis Strain(s): 227 DOI: 10.1016/j.biortech.2020.123101 |
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Ferris, P., Olson, B. J., De Hoff, P. L., Douglass, S., Casero, D., Prochnik, S., Geng, S., Rai, R., Grimwood, J., Schmutz, J., Nishii, I., Hamaji, T., Nozaki, H., Pellegrini, M., Umen,J. G.
2010
Evolution of an expanded sex-determining locus in Volvox.
Science,
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2018
Procedures for transformation and their applications in Cyanidioschyzon merolae.
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87-103.
Keywords: Transformation; Homologous recombination; Gene targeting; biotechnology; Algae; Genetic engineering Strain(s): 3377 DOI: 10.1007/978-981-10-6101-1_7 |
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Forni, C., Telo, F. R., Caiola, M. G.
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Comparative analysis of the polysaccharides produced by different species of Microcystis (Chroococcales, Cyanophyta) .
Phycologia,
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Foy, R. H., Gibson, C. E.
1982
Photosynthetic characteristics of planktonic blue-green algae: the response of twenty strains grown under high and low light.
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Franklin, D. J., Steinke, M., Young, J., Probert, I., Malin, G.
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Dimethylsulphoniopropionate (DMSP), DMSP-lyase activity (DLA) and dimethylsulphide (DMS) in 10 species of coccolothophore.
Mar. Ecol. Prog. Ser.,
410,
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Keywords: Marine sulphur cycle; Calcifying haptophytes; Biogeochemistry; Emiliania; Gephyrocapsa; Calcidiscus; Coccolithophores Strain(s): 2694, 2696, 2697, 2707 DOI: 10.3354/meps08596 |
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Leaching of metals and metalloids from hydrothermal ore particulates and their effects on marine phytoplankton.
ACS Omega,
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Fujii, K.
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Process integration of supercritical carbon dioxide extraction and acid treatment for astaxanthin extraction from a vegetative microalga.
Food Bioprod. Process.,
90,
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Keywords: Supercritical carbon dioxide; Microalgae; Monoraphidium sp.; Astaxanthin; Chlorophyll Strain(s): 2267 DOI: 10.1016/j.fbp.2012.01.006 |
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Fujii, K., Imazato, E., Nakashima, H., Ooi, O., Saeki, A.
2006
Isolation of the non-fastidious microalga with astaxanthin-accumulating property and its potential for application to aquaculture.
Aquaculture,
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Characterization of the new microalgal strains, Oogamochlamys spp., and their potential for biofuel production.
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Keywords: Lipid; Biofuel; Microalgae; Oogamochlamys Strain(s): 3643, 3644 DOI: 10.1016/j.algal.2014.08.003 |
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2008
Potential of Monoraphidium sp. GK12 for energy-saving astazanthin production.
J. Chem. Tech. Biotechnol.,
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Fujii, K., Nakashima, H., Hashidzume, Y.
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Isolation of folate-producing microalgae, from oligotrophic ponds in Yamaguchi, Japan.
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Potential use of the astaxanthin-producing microalga, Monoraphidium sp. GK12, as a functional aquafeed for prawns.
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Simultaneous detection and determination of the absolute configuration of thiazole-containing amino acids in a peptide.
Tetrahedron,
58,
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Monosaccharide composition of the outer membrane lipopolysaccharide and O-chain from the freshwater cyanobacterium Microcystis aeruginosa NIES-87.
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Fujisawa, T., Narikawa, R., Okamoto, S., Ehira, S., Yoshimura, H., Suzuki, I., Masuda, T., Mochimaru, M., Takaichi, S., Awai, K., Sekine, M., Horikawa, H., Yashiro, I., Omata, S., Takarada, H., Katano, Y., Kosugi, H., Tanikawa, S., Ohmori, K., Sato, N.,Ikeuchi, M., Fujita, N., Ohmori, M.
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Genomic structure of an economically important cyanobacterium, Arthrospira (Spirulina) platensis NIES-39.
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Analytical aspects of cyanobacterial volatile organic compounds for investigation of their production behavior.
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Fujita, Y.
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Further investigation of the light-induced cytochrome b-559 reaction in membrane fragments of the blue-green alga Anabaena variabilis.
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Microcystin production by Microcystis aeruginosa exposed to phytoplanktivorous and omnivorous fish at different kairomone concentrations.
Bull. Environ. Contam. Toxicol.,
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Keywords: microcystin; kairomone; Hypophthalmichthys molitrix; Carassius gibelio langsdorfi Strain(s): 89, 103, 107 PubMed: 19669611 DOI: 10.1007/s00128-009-9841-2 |
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New evidence for morphological and genetic variation in the cosmopolitan coccolithophore Emiliania huxleyi (Prymnesiophyceae) from the COX1b-ATP4 genes.
J. Phycol.,
47,
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Keywords: biogeography; coccolithophore; Emiliania huxleyi; mitochondrial DNA; morphotype Strain(s): 837, 838, 1000, 1311, 1312, 1313, 1314 DOI: 10.1111/j.1529-8817.2011.01053.x |
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Strain(s): 604 |
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Metabolic co-dependence drives the evolutionary ancient Hydra-Chlorella symbiosis.
eLife,
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Isolation of myosin XI genes from the Closterium peracerosum-strigosum-littorale complex and analysis of their expression during sexual reproduction.
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Keywords: Closterium; Cytokinesis; Myosin XI; Real-time PCR; Sexual cell division; Sexual reproduction Strain(s): 65, 67, 68 PubMed: 16456621 DOI: 10.1007/s10265-005-0249-8 |
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2013
Distribution of the sex-determining geneMID and molecular correspondence of mating types within the isogamous genus Gonium (Volvocales, Chlorophyta).
PLoS One,
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e64385 (article ID).
Strain(s): 652, 653, 654, 655, 851, 852, 1038, 1039, 1708, 1710, 1711, 2455, 2457 PubMed: 23696888 DOI: 10.1371/journal.pone.0064385 |
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Identification of the minus-dominance gene ortholog in the mating-type locus of Gonium pectorale.
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Multiple independent changes in mitochondrial genome conformation in chlamydomonadalean algae.
Genome Biol. Evol.,
9,
993-999.
Keywords: Eudorina; linear mitochondrial DNA; telomere; Volvox; Yamagishiella Strain(s): 3982, 3984 DOI: 10.1093/gbe/evx060 |
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Hamaji, T., Kawai-Toyooka, H., Uchimura, H., Suzuki, M., Noguchi, H., Minakuchi, Y., Toyoda, A., Fujiyama, A., Miyagishima, S., Umen, J. G., Nozaki, H.
2018
Anisogamy evolved with a reduced sexdetermining region in volvocine green algae.
Communications Biology,
1,
17 (article ID).
Strain(s): 3982, 3983, 3984, 3985, 4018, 4100 DOI: 10.1038/s42003-018-0019-5 |
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Hamaji, T., Mogi, Y., Ferris, P. J., Mori, T., Miyagishima, S., Kabeya, Y., Nishimura, Y., Toyoda, A., Noguchi, H., Fujiyama, A., Olson, B. J. S. C., Marriage, T. N., Nishii, I., Umen, J. G. Nozaki, H.
2016
Sequence of the Gonium pectorale mating locus reveals a complex and dynamic history of changes in volvocine algal mating haplotypes.
G3-Genes Genomes Genet.,
6,
1179-1189.
Keywords: Gonium; Chlamydomonas; Volvox; mating locus; evolution; Genetics of Sex Strain(s): 2863 PubMed: 26921294 DOI: 10.1534/g3.115.026229 |
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Hamaji, T., Smith, DR., Noguchi, H., Toyoda, A., Suzuki, M., Kawai-Toyooka, H., Fujiyama, A., Nishii, I., Marriage, T., Olson, B. J. S. C., Nozaki, H.
2013
Mitochondrial and plastid genomes of the colonial green alga Gonium pectorale give insights into the origins of organelle DNA architecture within the Volvocales.
PLoS One,
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Hamamoto, Y., Honda, D.
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Nutritional intake of Aplanochytrium (Labyrinthulea, Stramenopiles) from living diatoms revealed by culture experiments suggesting the new prey–predator interactions in the grazing food web of the marine ecosystem.
PLoS One,
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Hamana, K.
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Cellular polyamines of phototrophs and beterotrophs belonging to the lower eukaryotic phyla Cercozoa, Euglenozoa, Heterokonta and Metamonada.
J. Gen. Appl. Microbiol.,
54,
135-140.
Keywords: cyanobacteria; homospermidine; polyamine; spermine; thermospermine Strain(s): 9, 15, 71, 86, 118, 253, 323, 330, 333, 548, 603, 621, 622, 1002, 1003, 1011, 1044, 1303, 1380, 1440, 1443, 1444 PubMed: 18497488 DOI: 10.2323/jgam.54.135 |
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Hamana, K., Aizaki T., Arai, E., Saito, A., Uchikata, K., Ohnishi, H.
2004
Distribution of norspermidine s a cellular polyamine within micro green algae including non-photosynthetic achlorophyllous Polytoma, Polytomella, Prototheca and Helicosporidium.
J. Gen. Appl. Microbiol.,
50,
289-295.
Keywords: Chlorophyta; green alga; Helicosporidium; norspermidine; polyamine; Polytoma; Polytomella; Prototheca Strain(s): 18, 251, 254, 255, 296, 329, 483, 486, 536 |
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Hamana, K., Furuchi, T., Hayashi, H., Niitsu, M.
2016
Additional analysis of cyanobacterial polyamines ─ Distributions of spermidine, homospermidine, spermine, and thermospermine within the phylum Cyanobacteria. ─
Microb. Resour. Syst.,
32,
179-186.
Keywords: cyanobacteria; homospermidine; polyamine; thermospermine Strain(s): 2086, 2087, 2134, 2412, 2539, 3373 |
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Hamana, K., Furuchi, T., Nakamura, T., Hayashi, H., Niitsu, M.
2017
Occurrence of penta-amines, hexa-amines and N-methylated polyamines in unicellular eukaryotic organisms belonging to the phyla Heterokontophyta and Labyrinthulomycota of the subdomain Stramenopiles.
J. Gen. Appl. Microbiol.,
62,
320-325.
Keywords: Bioaccumulation; clam Corbicula leana; cyanotoxins; elimination; Microcystis Strain(s): 2535 PubMed: 27773915 DOI: 10.2323/jgam.2016.05.001 |
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Hamana, K., Kobayashi, M., Furuchi, T., Hayashi, H., Niitsu, M.
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Polyamine analysis of unicellular, colonial, and multicellular green algae —Detection of aminobutylcadaverine, N1-aminopentylspermidine, N8-aminopentylspermidine, and penta-amines.—
Microb. Resour. Syst.,
34,
73-82.
Keywords: aminobutylcadaverine; aminopentylspermidine; green alga; penta-amine; polyamine; thermospermine Strain(s): 18, 35, 242, 691, 735, 1271, 1278, 2185, 2187, 2235, 2261, 2540, 2572, 3983 |
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Hamana, K., Kobayashi, M., Furuchi, T., Hayashi, H., Niitsu, M.
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Polyamine distribution profiles in unicellular and multicellular red algae (phylum Rhodophyta) —Detection of 1,6-diaminohexane, aminobutylcadaverine, canavalmine and aminopropylcanavalmine.—
Microb. Resour. Syst.,
34,
83-91.
Keywords: aminobutylcadaverine; aminopropylcanavalmine; canavalmine; diaminohexane; polyamine; red algae; Rhodophyta Strain(s): 551, 1032, 1572, 1957, 2138, 2140, 2636, 2662, 2742 |
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Hamana, K., Kobayashi, M., Yokota, A., Sekiguchi, H., Niitsu, M.
2008
Cellular polyamine profiles in cyanobacteria.
Microbiol. Cult. Coll.,
24,
3-8.
Keywords: cyanobacteria; homospermidine; polyamine; spermine; thermospermine Strain(s): 26, 33, 36, 46, 206, 208, 230, 267, 268, 305, 361, 416, 433, 434, 481, 507, 597, 598, 931, 932, 1031, 2115, 2133, 2135 |
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Hamana, K., Matsuzaki, S., Niitsu, M., Samejima, K., Nagashima, H.
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Polyamines of unicellular thermoacidophilic red alga Cyanidium caldarium.
Phytochemistry,
29,
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Keywords: Cyanidium caldarium; Rhodophyta; red algae; polyamines; chemotaxonomy Strain(s): 250, 2137, 3891 DOI: 10.1016/0031-9422(90)85082-Q |
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Hamana, K., Miyagawa, K., Matsuzaki, S.
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Occurrence of syn-homospermidine as the major polyamine in nitrogen-fixing cyanobacteria.
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Strain(s): 19, 37, 39, 2129, 3275 PubMed: 6405746 DOI: 10.1016/0006-291X(83)91507-3 |
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Hamana, K., Niitsu, M.
2006
Cellular polyamines of lower eukaryotes belonging to the phyla Glaucophyta, Rhodophyta, Cryptophyta, Haptophyta and Percolozoa.
J. Gen. Appl. Microbiol.,
52,
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Keywords: Cryptophyta; Glaucophyta; Haptophyta; Perclozoa; polyamine; Rhodophyta Strain(s): 8, 274, 276, 277, 282, 353, 388, 699, 706, 715, 741, 763, 764, 1016, 1017, 1032, 1036, 1332, 1441, 1456, 1457, 1462, 1463, 1467, 1473, 1516, 3377 PubMed: 17116972 DOI: 10.2323/jgam.52.235 |
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Occurrence of homospermidine and thermospermine as a cellular polyamine in unicellular chlorophyte and multicellular charophyte green algae
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59,
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Keywords: green alga; homospermidine; polyamine; thermospermine Strain(s): 18, 151, 160, 255, 296, 306, 360, 363, 640, 722, 836, 1409, 1410, 1411, 1419, 1837, 2164, 2199, 3374 PubMed: 24005181 DOI: 10.2323/jgam.59.313 |
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Hamana, K., Sakamoto, A., Nishina, M., Niitsu, M.
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Cellular polyamine profile of the phyla Dinophyta, Apicomplexa, Ciliophora, Euglenozoa, Cercozoa and Heterokonta.
J. Gen. Appl. Microbiol.,
50,
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Keywords: Apicomlexa; Cercozoa; Ciliophora; Dinophyta; Euglenozoa; Heterokonta; norspermidine; polyamine Strain(s): 12, 286, 304, 331, 381, 387, 463 PubMed: 15747233 DOI: 10.2323/jgam.50.297 |
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A novel approach to enhance astaxanthin production in Haematococcus lacustris using a microstructure-based culture platform.
Algal Res.,
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101464.
Keywords: Haematococcus lacustris; Microfabricated structure; Astaxanthin; ROS; Mechanical stimulation Strain(s): 144 DOI: 10.1016/j.algal.2019.101464 |
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Hanagata, N., Karube, I., Chihara, M., Silva, P. C.
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Reconsideration of the taxonomy of ellipsoidal species of Chlorella (Trebouxiophyceae, Chlorophyta), with establishment of Watanabea gen. nov.
Phycol. Res.,
46,
221-229.
Keywords: Chlorella saccharophila; ellipsoidal species of Chlorella; pyrenoid-lacking Chlorella-like algae: Watanabea gen. et sp. nov. Strain(s): 2189 DOI: 10.1111/j.1440-1835.1998.tb00117.x |
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Interrelations between Microcystis and Cladocera in the highly eutrophic Lake Kasumigaura, Japan.
Int. Revue ges. Hydrobiol.,
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Keywords: Microcystis; Cladocera; toxicity; food chain; Lake Kasumigaura Strain(s): 44, 298, 299 |
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Handa, S., Nakahara, M., Tsubota, H., Deguchi, H., Nakano, T.
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A new aerial alga, Stichococcus ampulliformis sp. nov. (Trebouxiophyceae, Chlorophyta) from Japan.
Phycol. Res.,
51,
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Keywords: aerial algae; molecular phylogeny; Stichococcus ampulliformis sp. nov.; Trebouxiophyceae; 18SrRNA gene Strain(s): 996 DOI: 10.1046/j.1440-1835.2003.00311.x |
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Hang, L. T., Mori, K., Tanaka, Y., Morikawa, M., Toyama, T.
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Enhanced lipid productivity of Chlamydomonas reinhardtii with combination of NaCl and CaCl2 stresses.
Bioprocess. Biosyst. Eng.,
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Hano, T., Tomaru, Y.
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Metabolomics-based approach to explore growth phase-dependent markers in cultured diatom Chaetoceros tenuissimus.
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1128,
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Keywords: Diatom; Metabolomics; Gas chromatography mass spectrometry; Liquid chromatography tandem mass spectrometry; Growth phase Strain(s): 3715 PubMed: 31499295 DOI: 10.1016/j.jchromb.2019.121779 |
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Hanschen, E. R., Ferris, P. J., Michod, R. E.
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Early evolution of the genetic basis for soma in the Volvocaceae.
Evolution,
68,
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Keywords: Gene duplication; germ-soma differentiation; major transitions; multicellularity; regA; Volvox Strain(s): 2739 PubMed: 4689915 DOI: 10.1111/evo.12416 |
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Hanschen, E. R., Herron, M. D., Wiens, J. J., Nozaki, H., Michod, R. E.
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Multicellularity drives the evolution of sexual traits.
Am. Nat.,
192,
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Keywords: sex; volvocine green algae; multicellularity; ancestral state; reconstruction; anisogamy; sexual dimorphism Strain(s): 289, 418, 421, 456, 458, 460, 522, 541, 543, 544, 545, 564, 566, 568, 569, 571, 572, 574, 578, 582, 653, 732, 751, 851, 856, 857, 872, 875, 876, 877, 878, 880, 882, 883, 891, 892, 1038, 1362, 1711, 1713, 2457, 2569, 2738, 3382, 3388, 3780, 3782 DOI: 10.1086/698301 |
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Hanschen, E. R., Herron, M. D., Wiens, J. J., Nozaki, H., Michod, R. E.
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Repeated evolution and reversibilityof self-fertilization in the volvocinegreen algae.
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72,
386-398.
Keywords: Haploid; phylogenetics; self-fertilization; sex; sexual reproduction; volvocine green algae Strain(s): 289, 418, 456, 458, 460, 541, 543, 544, 545, 564, 566, 568, 569, 571, 572, 574, 578, 582, 653, 732, 851, 856, 857, 872, 875, 876, 877, 878, 880, 882, 883, 891, 892, 1038, 1362, 1711, 1713, 2457, 2569, 2738, 3382, 3388, 3780, 3782 PubMed: 29134623 DOI: 10.1111/evo.13394 |
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Hanschen, E. R., Marriage, T.N., Ferris, P.J., Hamaji, T., Toyoda, A., Fujiyama,A., Neme,R., Noguchi,H., Minakuchi, Y., Suzuki, M., Kawai-Toyooka, H., Smith, D.R., Sparks, H., Anderson, J., Bakaric, R., Luria, V., Karger, A., Kirschner, M.W., Durand, P.M., Michod, R.E., Nozaki, H., Olson, B.J.
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The Gonium pectorale genome demonstrates co-option of cell cycle regulation during the evolution of multicellularity.
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Strain(s): 2863 PubMed: 27102219 DOI: 10.1038/ncomms11370 |
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Hara, Y.
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Chattonella ovata Y. Hara et Chihara mss.
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p. 340-341 (in Japanese with English summary).
Strain(s): 603 |
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Hara, Y., Chihara, M.
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Ultrastructure and taxonomy of Chattonella (Class Raphidophyceae) in Japan.
Jpn. J. Phycol.,
30,
47-56 (in Japanese with English summary).
Keywords: Chattonella; Chattonella marina comb. nov.; Raphidophyceae; red tides; taxonomy; ultrastructure Strain(s): 161 |
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Hara, Y., Doi, K., Chihara, M.
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Four new species of Chattonella (Raphidophyceae, Chromophyta) from Japan.
Jpn. J. Phycol. (Sôrui),
42,
407-420.
Keywords: Chattonella; C. globosa; C. minima; C. ovata; C. verruculosa; Raphidophyceae; red tide organisms; taxonomy Strain(s): 118, 161, 603, 670, 849 |
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Hara, Y., Inouye, I., Chihara, M.
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Morphology and ultrastructure of Olisthodiscus luteus (Raphidophyceae) with special reference to the taxonomy.
Bot. Mag. Tokyo,
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Keywords: Heterosigma; Olisthodiscus luteus; Raphidophyceae; red tide flagellate; taxonomy of Olisthodiscus; ultrastructure of Olisthodiscus Strain(s): 15 DOI: 10.1007/BF02488775 |
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Blue color formation of cyanobacteria with b-cyclocitral.
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Keywords: b-cyclocitral; cyanobacteria; lysis; blue color formation; acid stress Strain(s): 73, 102, 103, 112, 298, 611, 808 PubMed: 19936836 DOI: 10.1007/s10886-009-9706-5 |
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Quantitative PCR method for enumeration of cells of cryptic species of the toxic marine dinoflagellate Ostreopsis spp. in coastal waters of Japan.
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Molecular response of the bloom-forming cyanobacterium, Microcystis aeruginosa, to phosphorus Limitation.
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Transcriptomic responses in the bloom-forming cyanobacterium Microcystis 2 induced during exposure to zooplankton.
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Accurate classification of microalgae by intelligent frequency-division-multiplexed fluorescence imaging flow cytometry.
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Hase, E., Mihara, S., Otsuka, H.
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An additional note on the nature of sulfur-containing peptide nucleotide complex obtained from Chlorella and yeast.
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Hase, E., Mihara, S., Otsuka, H., Tamiya, H.
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Sulfur-containing peptide-nucleotide complex isolated from Chlorella and yeast cells.
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Hase, E., Mihara, S., Tamiya, H.
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Role of sulfur in the cell division of Chlorella with special reference to the sulfur compounds appearing during the process of cell division. I.
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Hase, E., Mihara, S., Tamiya, H.
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Some data on the nature of sulfur-containing peptide-nucleotide compounds obtained from Chlorella cells at different developmental stages in their life cycle.
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Hase, E., Mihara, S., Tamiya, H.
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Sulfur-containing deoxypentose polynucleotides obtained from Chlorella cells.
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Hase, E., Mihara, S., Tamiya, H.
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Capabilities of various sulfur substances in inducing the cell division of Chlorella arrested by sulfur deficiency.
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Hase, E., Mihara, S., Tamiya, H.
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Role of sulfur in the cell division of Chlorella with special reference to the sulfur compounds appearing during the process of cell division. II.
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A preliminary note on the phosphorus compounds in chloroplast and volutin granules isolated from Chlorella cells.
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The role of sulfur in the cell division of Chlorella.
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Some data on the growth physiology of Chlorella studied by the technique of synchronous culture.
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Hase, E., Moriyama, Y., Tamiya, H.
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A short remark on the role of sulfur in the cell division of Chlorella.
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Hase, E., Otsuka, H., Mihara, S., Tamiya, H.
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Role of sulfur in the cell division of Chlorella, studied by the technique of synchronous culture.
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Cell Struct. Funct.,
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Assessment of herbicide effects on algal production in the Kokai River (Japan) using a model stream and Selenastrum bioassay.
Ecotoxicology,
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Keywords: herbicides; effects; algal production; algal community; channel carrying river water; bioassay; pesticide analysis Strain(s): 35 |
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Hatano, S.
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Studies on frost hardiness in Chlorella ellipsoidea: Effects of antimetabolites, surfactants, hormones, and sugars on the hardening process in the light and dark.
In Plant Cold Hardiness and Freezing Stress, Eds. by Li, P. H. & Sakai, A., Academic Press, New York,
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Strain(s): 2170 |
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Hatano, S., Akashi, H., Nogata, Y., Yoshimoto, M.
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Fatty acid synthetase system in relation to frost hardiness in Chlorella ellipsoidea.
In Plant Cold Hardiness , Ed. by Li, P. H., Alan R. Liss, Inc., New York,
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Hatano, S., Hara, Y., Takahashi, M.
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Preliminary study on the effects of photoperiod and nutrients on the vertical migratory behavior of a red tide flagellate, Heterosigma akashiwo. Jpn.
Jpn. J. Phycol.,
31,
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Keywords: Heterosigma akashiwo; nutrients; photoperiod; vertical migration Strain(s): 6 |
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Hatano, S., Joh, T., Miyamoto, T., Yoshimoto, M.
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Preparation of protoplasts from Chlorella ellipsoidea C-27.
Plant Cell Physiol.,
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Keywords: cell wall-lytic enzyme; chitosanase; Chlorella ellipsoidea C-27; protoplast Strain(s): 2170 DOI: 10.1093/oxfordjournals.pcp.a078301 |
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Hatano, S., Kabata, K.
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Transition of lipid metabolksm in relation to frost hardiness in Chlorella ellipsoidea.
In Plant Cold Hardiness and Freezing Stress, Eds. by Li, P. H. & Sakai, A., Academic Press, New York,
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Plant Physiol.,
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Strain(s): 687, 2170 PubMed: 16661649 DOI: 10.1104/pp.67.2.216 |
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Accumulation of free fatty acid during hardening of Chlorella ellipsoidea.
Plant Physiol.,
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Studies on frost hardiness in Chlorella ellipsoidea. I. Development of frost hardiness of Chlorella ellipsoidea in cynchronous culture.
Plant Cell Physiol.,
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Strain(s): 2170 DOI: 10.1093/oxfordjournals.pcp.a075298 |
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Hatano, S., Sadakane, H., Tutumi, M., Watanabe, T.
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Studies on frost hardiness in Chlorella ellipsoidea. II. Effects of inhibitors of RNA and protein synthesis and surfactants on the process of hardening.
Plant Cell Physiol.,
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Studies on the metabolism of urea and other nitrogenous compounds in Chlorella ellipsoidea.
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1959
Crystalline phycobilin chromoproteids obtained from a blue-green alga, Tolypothrix tenuis.
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1959
Effect of pre-illumination on the formation of phycobilin pigments in a blue-green alga, Tolypothrix tenuis.
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Formation of phycobilin pigments in a blue-green alga, Tolypothrix tenuis, as induced by illumination with colored lights.
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Spectroscopic studies on the phycobilin pigments obtained from blue-green and red algae.
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Ferredoxin-dependent photoreduction of nitrate and nitrite by subcellular preparations of Anabaena cylindrica.
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Quantitative PCR detection and improved sample preparation of microcystin-producing Anabaena, Microcystis and Planktothrix.
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Microfluid. Nanofluid.,
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Keywords: Acoustofluidics; Cell manipulation; On-chip cell Manipulation; Vibration-induced flow; Motile cells Strain(s): 48 DOI: 10.1007/s1040 4-018-2062-4 |
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Morphology, molecular phylogeny and taxonomy of Gonium maiaprilis sp. nov. (Goniaceae, Chlorophyta) from Japan.
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Keywords: Chlorophyceae; Goniaceae; Gonium; Gonium maiaprilis sp. nov.; ITS; molecular phylogeny; morphology; rbcL; reproduction; taxonomy Strain(s): 2455, 2456, 2457, 2458, 2459, 2460, 2461 DOI: 10.2216/PH09-56.1 |
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Construction of river model biofilm for assessing pesticide effects.
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Optimization of seawater-based triacylglycerol accumulation in a freshwater green alga, Chlorella kessleri, through simultaneous imposition of loweredtemperature and enhanced-light intensity.
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Keywords: Chlorella kessleri; Freshwater green algae; Low temperature; Moderate light; Seawater; Triacylglycerol Strain(s): 2152 DOI: 10.1016/j.algal.2017.10.016 |
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Characterization of a Chlorophyta microalga isolated from a microbial mat in Salar de Atacama (northern Chile) as a potential source of compounds for biotechnological applications.
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Keywords: Altiplane; Chlorella sorokiniana; extreme tolerant; microalgae; microbial mat; oleaginous strain, polyunsaturated; fatty acid; stearic acid Strain(s): 2173 DOI: 10.1111/pre.12176 |
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A deviant mitochondrial genetic code in prymnesiophytes (yellow-algae): UGA codon for tryptophan.
Curr. Genet.,
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Keywords: Prymnesiophyta; deviant genetic code; cytochrome c oxidase subunit I; the codon-capture theory Strain(s): 8, 353, 388 PubMed: 9342410 DOI: 10.1007/s002940050280 |
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1996
UAG is a sense codon in several chlorophycean mitochondria.
Curr. Genet.,
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Keywords: deviant genetic code; COXI; Chlorophyceaen mitochondria; release factor Strain(s): 96, 209, 227, 415 PubMed: 8662206 DOI: 10.1007/s002940050096 |
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1998
Phylogenetic position of the Phacotaceae within the Chlamydophyceae as revealed by analysis of 18S rDNA and rbcL sequences.
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Keywords: Phacotaceae; Volvocales; 18S rDNA phylogeny; lorica-bearing flagellates; green algae Strain(s): 446, 858, 859, 861, 862 PubMed: 9767687 DOI: 10.1007/PL00006399 |
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Electrophoretic karyotyping and chromosomal gene mapping of Chlorella.
Nucleic Acids Res.,
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Higo, A., Kawashima, T., Borg, M., Zhao, M., López-Vidriero, I., Sakayama, H., Montgomery, S, A., Sekimoto, H., Hackenberg, D., Shimamura, M., Nishiyama, T., Sakakibara, K., Tomita, Y., Togawa, T., Kunimoto, K., Osakabe, A., Suzuki, Y., Yamato, K. T., Ishizaki, K., Nishihama, R., Kohchi, T., Franco-Zorrilla, J. M., Twell, D., Berger, F., Araki, T.
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Transcription factor DUO1 generated by neo-functionalization is associated with evolution of sperm differentiation in plants.
Nat. Commun.,
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Endosymbiosis-related changes in ultrastructure and chemical composition of Chlorella variabilis (Archaeplastida, Chlorophyta) cell wall in Paramecium bursaria (Ciliophora, Oligohymenophorea).
Eur. J. Protistol.,
66,
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Keywords: Cell wall; Chlorella variabilis; GlycosaminoglycansParamecium bursaria; Symbiosis Strain(s): 3374 PubMed: 30286318 DOI: 10.1016/j.ejop.2018.09.003 |
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Inner ear development in cyclostomes and evolution of the vertebrate semicircular canals.
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Identification of antioxidant genes in the ostracod Heterocypris incongruens through de novo transcriptome sequencing.
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An examination of algal bioassay method for agricultural chemicals and heavy metals in a water environment.
Hokkaido Kankyô Kagaku Kenkyû Sentâ Syohô,
18,
41-49 (in Japanese with English summary).
Strain(s): 228, 229 |
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Hirabaru, C., Izumo,A., Fujiwara, S., Tadokoro, Y., Shimonaga, T., Konishi, M., Yoshida, M., Fujita, N., Nakamura, Y., Yoshida, M., Kuroiwa, T., Tsuzuki, M.
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The primitive rhodophyte Cyanidioschyzon merolae contains a semiamylopectin-type, but not an amylose-type, α-glucan.
Plant Cell Physiol.,
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Keywords: Amylose; Cyanidioschyzon; Floridean starch; Glycogen; Starch synthase; Semiamylopectin Strain(s): 551 PubMed: 20385610 DOI: 10.1093/pcp/pcq046 |
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Action mechanism of a selective anti-cyanobacterial compound, argimicin A.
J. Antibiotics,
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Strain(s): 41, 45, 81, 102, 204, 230, 298, 592 DOI: 10.7164/antibiotics.56.154 |
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1979
Synthetic rates of chloroplast and cytoplasmic ribosomal ribonucleic acids during the cell cycle of Chlorella.
Plant Cell Physiol.,
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Keywords: cell cycle; Chlorella; chloroplast rRNA; cytoplasmic rRNA; RNA synthesis; radioisotopic precursor Strain(s): 2170 |
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The evolution of male–female sexual dimorphism predates the gender-based divergence of the mating locus gene MAT3/RB.
Mol. Biol. Evol.,
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Keywords: gender-based divergence; gene conversion; male–female sexual dimorphism; MAT3/RB, mating type locus; volvocine algae Strain(s): 722, 733, 866, 1710, 1711, 1712, 1859, 1861, 3985, 4018 PubMed: 23364323 DOI: 10.1093/molbev/mst018 |
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Hiramatsu, K., Ideguchi, T., Yonamine, Y., Lee, S. W., Luo, Y., Hashimoto, K., Ito, T., Hase, M., Park, J.-W., Kasai, Y., Sakuma, S., Hayakawa, T., Arai, F., Hoshino, Y., Goda, K.
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Isolation of high molecular weight cellular DNA with a novel granulated hydroxyapatite.
Agric. Biol. Chem.,
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Strain(s): 2170 |
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Hirano, H., Takeda, Y., Iwamura, T.
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Unique repetitive sequences of 170 bp in Chlorella.
Plant Mol. Biol.,
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Keywords: Chlorella; HaeIII family; repetitive sequence; tandem repeat Strain(s): 2160, 2170 PubMed: 24302372 DOI: 10.1007/BF00752903 |
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1990
γ-ｌinolenic acid production by microalgae.
Appl. Biochem. Biotechnol.,
24/25,
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Keywords: g-linolenic acid; Spirulina platensis; green algae; lipid; marine microalgae Strain(s): 39 DOI: 10.1007/BF02920244 |
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A receptor-like kinase, related to cell wall sensor of higher plants, is required for sexual reproduction in the unicellular charophycean alga, Closterium peracerosum-strigosum-littorale complex.
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56,
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Keywords: Cell wall; Charophycean alga; Closterium peracerosum–strigosum–littorale complex; CrRLK1L-1; Receptor-like kinase; Sexual reproduction Strain(s): 67, 68 PubMed: 25941232 DOI: 10.1093/pcp/pcv065 |
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Ecotoxicity testing of bioremediation agents for shoreline oil-spill clean up.
Jpn. J. Environ. Toxicol.,
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Keywords: ecotoxicity; bioremediation; oil-spill; acute toxicity; marine organisms Strain(s): 324 DOI: 10.11403/jset.9.115 |
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2016
Draft genome sequences of four species of Chlamydomonas containing phosphatidylcholine.
GenomeA,
4,
e01070-16 (article ID).
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Hirashima, T., Toyoshima, M., Moriyama, T., Nakamura, Y., Sato, N.
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Characterization of phosphoethanolamine-N-methyltransferases in green algae.
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488,
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Keywords: Green algal evolution; Chlamydomonas; Phosphatidylcholine biosynthesis; Phosphoethanolamine-N-methyltransferase Strain(s): 2202, 2207, 2212, 2235, 2242 PubMed: 2848352 DOI: 10.1016/j.bbrc.2017.05.026 |
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Hirashima, T., Toyoshima, M., Moriyama, T., Sato, N.
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Evolution of the phosphatidylcholine biosynthesis pathways in green algae: Combinatorial diversity of methyltransferases.
J. Mol. Evol.,
86,
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Keywords: Chlamydomonas; Metabolic diversity; Phosphatidylcholine biosynthesis; Phosphoethanolamine-N-methyltransferase; Phospholipid-N-methyltransferase Strain(s): 2202, 2207, 2212, 2242 PubMed: 29330556 DOI: 10.1007/s00239-017-9826-4 |
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Hirata, K., Phunchindawan, M., Tukamoto, J., Goda, S., Miyamoto, K.
1996
Cryopreservation of microalgae using encapsulation-dehydration.
CryoLetters,
17,
321-328.
Keywords: Dunaliella tertiolecta; microalgae; cryopreservation; encapsulation-dehydration Strain(s): 8, 19, 22, 24, 27, 32, 44, 242, 375, 396, 422, 437 |
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Hirato, Y., Goto, M., Tokuhisa, M., Tanigawa, M., Nishimura, K.
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Crystallization and X-ray analysis of D-threonine aldolase from Chlamydomonas reinhardtii.
Acta Crystallogr. F-Struct. Biol.,
F73,
86-89.
Keywords: D-threonine aldolase; Chlamydomonas reinhardtii; D-amino acids; crystallization Strain(s): 2237 PubMed: 28177318 DOI: 10.1107/S2053230X1602063X |
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Hirato, Y., Tokuhisa, M., Tanigawa, M., Ashida, H., Tanaka, H., Nishimura, K.
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Cloning and characterization of d-threonine aldolase from the green alga Chlamydomonas reinhardtii.
Phytochemistry,
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Keywords: Chlamydomonas reinhardtii; Chlamydomonadaceae; Green alga; Enzyme characterization; d-Amino acid; d-Threonine aldolase; Pyridoxal 5’-phosphate Strain(s): 2237 PubMed: 28038776 DOI: 10.1016/j.phytochem.2016.12.012 |
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Identification of Heterocapsa circularisquama by means of antibody.
Fish. Sci.,
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Keywords: identification; Heterocapsa; dinoflagellate; antibody Strain(s): 7, 235, 472, 473 DOI: 10.2331/fishsci.68.sup1_627 |
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Hiroishi, S., Uchida, A., Nagasaki, K., Ishida, Y.
1988
A new method for identification of inter- and intra-species of the red tide algae Chattonella antiqua and Chattonella marina (Raphidophyceae) by means of monoclonal antibodies.
J. Phycol.,
24,
442-444.
Keywords: Chattonella; identification; immunofluorescence; inter-species; intra-species; method; monoclonal antibody; red tide Strain(s): 1, 2, 14, 83, 84, 85, 86, 113, 114, 115, 116, 118, 121 DOI: 10.1111/j.1529-8817.1988.tb04488.x |
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Hiroishi, S., Uchida, A., Nagasaki, K., Ishida, Y.
1989
A new method for inter- and intra-species identification of red tide algae Chattonella antiqua and Chattonella marina by means of monoclonal antibodies.
In Red Tides: Biology, Environmental Science, and Toxicology, Eds. by Okaichi, T., Anderson, D. M. & Nemoto, T., Elsevier Science Pub., New York,
p. 299-300.
Strain(s): 85, 86, 118, 121 |
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Hirokawa, T., Hata, M., Takeda, H.
1982
Correlation between the starch level and the rate of starch synthesis during the developmental cycle of Chlorella ellipsoidea.
Plant Cell Physiol.,
23,
813-820.
Keywords: 14C-fixation; cell cycle; Chlorella ellipsoidea; photosynthesis; starch accumulation; starch synthesis; synchronous culture Strain(s): 2170 |
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Hirokawa, T., Miyachi, S., Tamiya, H.
1958
Effect of hydrogen peroxide on the light-induced capacity of carbon dioxide-fixation in green algae.
J. Biochem.,
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Strain(s): 2170 |
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Hirokawa, T., Takeda, H.
1980
Automatic analysing system for the liquid chromatography.
J. Gen. Edu. Dept., Niigata Univ.,
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Strain(s): 226, 2170 |
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1998
Development of a database system useful for identification of Anabaena spp. (Cyanobacteria).
Phycol. Res.,
46, Suppl.,
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Keywords: Anabaena; computer; cyanobacteria; database system; identification; morphology Strain(s): 810, 819, 826, 835 DOI: 10.1111/j.1440-1835.1998.tb00276.x |
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Hirooka, S., Hirose, Y., Kanesaki, Y., Higuchi, S., Fujiwara, T., Onuma, R., Era, A., Ohbayashi, R., Uzuka, A., Nozaki, H., Yoshikawa, H., Miyagishima, SY.
2017
Acidophilic green algal genome provides insights into adaptation to an acidic environment.
Proc. Natl. Acad. Sci. U. S. A.,
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Keywords: acidic environment; acidophilic alga; comparative genomics; comparative transcriptomics; environmental adaptation Strain(s): 2499 PubMed: 28893987 DOI: 10.1073/pnas.1707072114 |
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Hirooka, T., Akiyama, Y., Tsuji, N., Nakamura, T., Nagase, H., Hirata, K., Miyamoto, K.
2003
Removal of hazardous phenols by microalgae under photoautotrophic conditions.
J. Biosci. Bioeng.,
95,
200-203.
Keywords: green algae; cyanobacteria; nitrophenol; chlorophenol; bisphenol A; photoautotrophic conditions Strain(s): 19, 23, 44, 422, 437 PubMed: 16233393 DOI: 10.1016/S1389-1723(03)80130-5 |
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1984
Near-UV and blue light effects in cyanobacteria.
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Phylogenetic analyses of potentially free-living Symbiodinium spp. Isolated from coral reef sand in Okinawa, Japan.
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Strain(s): 2638, 2639, 2640, 2641, 2642, 2643 DOI: 10.1007/s00227-008-1011-2 |
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Hirose, Y., Fujisawa, T., Ohtsubo, Y., Katayama, M., Misawa, N., Wakazuki, S., Shimura, Y., Nakamura, Y., Kawachi, M., Yoshikawa, H., Eki, T., Kanesaki, Y.
2016
Complete genome sequence of cyanobacterium Fischerella sp. NIES-3754, providing thermoresistant optogenetic tools.
J. Biotechnol.,
220,
45-46.
Keywords: Cyanobacteria; Genome; Photosensor; Thermophile Strain(s): 3754 PubMed: 26784989 DOI: 10.1016/j.jbiotec.2016.01.011 |
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Hirose, Y., Fujisawa, T., Ohtsubo, Y., Katayama, M., Misawa, N., Wakazuki, S., Shimura, Y., Nakamura, Y., Kawachi, M., Yoshikawa, H., Eki, T., Kanesaki, Y.
2016
Complete genome sequence of cyanobacterium Leptolyngbya sp. NIES-3755.
GenomeA,
4,
e00090-16 (article ID).
Strain(s): 3755 PubMed: 26988037 DOI: 10.1128/genomeA.00090-16 |
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Hirose, Y., Fujisawa, T., Ohtsubo, Y., Katayama, M., Misawa, N., Wakazuki, S., Shimura, Y., Nakamura, Y., Kawachi, M., Yoshikawa, H., Eki, T., Kanesaki, Y.
2016
Complete genome sequence of cyanobacterium Nostoc sp. NIES-3756, a potentially useful strain for phytochrome-based bioengineering.
J. Biotechnol.,
218,
51-52.
Strain(s): 3756 PubMed: 26656223 DOI: 10.1016/j.jbiotec.2015.12.002 |
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Hirose, Y., Katayama, M., Ohtsubo, Y., Misawa, N., Iioka, E., Suda, W., Oshima, K., Hanaoka, M., Tanaka, K., Eki, T., Ikeuchi, M., Kikuchi, Y., Ishida, M., Hattori, M.
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Complete genome sequence of cyanobacterium Geminocystis sp. strain NIES-3708, which performs type II complementary chromatic acclimation.
GenomeA,
3,
e00357-15 (article ID).
Strain(s): 3708 PubMed: 25953174 DOI: 10.1128/genomeA.00385-15 |
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Hirose, Y., Katayama, M., Ohtsubo, Y., Misawa, N., Iioka, E., Suda, W., Oshima, K., Hanaoka, M., Tanaka, K., Eki, T., Ikeuchi, M., Kikuchi, Y., Ishida, M., Hattori, M.
2015b
Complete genome sequence of cyanobacterium Geminocystis sp. strain NIES-3709, which harbors a phycoerythrin-rich phycobilisome.
GenomeA,
3,
e00385-15 (article ID).
Strain(s): 3709 PubMed: 25931605 DOI: 10.1128/genomeA.00385-15 |
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Hirose, Y., Misawa, N., Yonekawa, C., Nagao, N., Watanabe, M., Ikeuchi, M., Eki, T.
2017
Characterization of the genuine type 2 chromatic acclimation in the two Geminocystis cyanobacteria.
DNA Res.,
24,
387-396.
Keywords: Cyanobacteria; chromatic acclimation; phycobilisome; cyanobacteriochrome Strain(s): 3708, 3709 PubMed: 28338901 DOI: 10.1093/dnares/dsx011 |
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Hiwatari, T., Kasai, F., Watanabe, M. M., Nei, T.
1984
Cryopreservation of Scenedesmus acutus and Pediastrum duplex in liquid nitrogen - Survival and growth after freezing.
Jpn. J. Freez. Dry.,
30,
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Strain(s): 95, 213 |
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Hodoki, Y., Ohbayashi, K., Kobayashi, Y., Okuda, N., Nakano, S.
2012
Detection and identification of potentially toxic cyanobacteria: Ubiquitous distribution of Microcystis aeruginosa and Cuspidothrix issatschenkoi in Japanese lakes.
Harmful Algae,
16,
49-57.
Keywords: Anatoxin-a; Automated rRNA intergenic spacer analysis (ARISA); Cuspidothrix issatschenkoi; Cyanotoxin; Microcystin; Microcystis aeruginosa Strain(s): 30, 40, 77, 102, 111, 230, 512, 843, 905, 928, 932, 937, 991, 1645, 1669, 1698, 1729, 1950, 2116 DOI: 10.1016/j.hal.2012.01.003 |
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Hodoki, Y., Ohbayashi, K., Kobayashi, Y., Okuda, N., Nakano, S.-I.
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Temporal variation in cyanobacteria species composition and photosynthetic activity in experimentally induced blooms.
J. Plankton Res.,
33,
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Keywords: cyanobacterial bloom; DCMU [3'-(3,4-dichlorophenyl)-1',1'-dimethyl urea]; maximum quantum yieldMicrocystis aeruginosa Strain(s): 843 DOI: 10.1093/plankt/fbr040 |
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Hoef-Emden, K.
2012
Pitfalls of establishing DNA barcoding systems in protists: the cryptophyceae as a test case.
PLoS One,
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Hoef-Emden, K.
2014
Osmotolerance in the Cryptophyceae: Jacks-of-all-trades in the Chroomonas clade.
Protist,
165,
123-143.
Keywords: Chroomonas; contractile vacuole; cryptomonads; floridoside; osmolarity; osmoregulation; osmotolerance; phylogeny Strain(s): 708, 712, 713, 714, 1004 PubMed: 24568876 DOI: 10.1016/j.protis.2014.01.001 |
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Revision of the genus Cryptomonas (Cryptophyceae): a combination of molecular phylogeny and morphology provides insights into a long-hidden dimorphism.
Protist,
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Hogetsu, D., Miyachi, S.
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Effect of oxygen on the light-enhanced dark carbon dioxide fixation in Chlorella cells.
Plant Physiol.,
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Hogetsu, D., Miyachi, S.
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Effects of CO2 concentration during growth on subsequent photosynthetic CO2 fixation.
Plant Cell Physiol.,
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Strain(s): 2160 |
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Hogetsu, D., Miyachi, S.
1979
Role of carbonic anhydrase in photosynthetic CO2 fixation in Chlorella.
Plant Cell Physiol.,
20,
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Keywords: carbonic anhydrase; Chlorella; CO2 fixation; photosynthesis; ribulose 1,5-bisphosphate carboxylase Strain(s): 2160 |
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1999
Detection of seven major evolutionary lineages in cyanobacteria based on the 16S rRNA gene sequence analysis with new sequences of five marine Synechococcus strains.
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48,
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Keywords: cyanobacteria; Synechococcus; phylogeny; ribosomal RNA; maximum-likelihood method; neighbor-joining method; rate homo- and heterogeneous models Strain(s): 27, 208, 510, 2116, 2118, 2119 PubMed: 10229577 DOI: 10.1007/PL00006517 |
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2012
Carbon dioxide capture and nutrients removal utilizing treated sewage by concentrated microalgae cultivation in a membrane photobioreactor.
Bioresour. Technol.,
125,
59-64.
Keywords: Carbon dioxide capture; Nutrients removal; Membrane photobioreactor; Microalgae; Botryococcus braunii Strain(s): 2199 DOI: 10.1016/j.biortech.2012.08.138 |
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Honda, R., Rukapan, W., Komura, H., Teraoka, Y., Noguchi, M., Hoek, E.M.V.
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Effects of membrane orientation on fouling characteristics of forward osmosis membrane in concentration of microalgae culture.
Bioresour. Technol.,
197,
429-433.
Keywords: Forward osmosis; Microalgae; Membrane fouling; Extracellular polymeric substances (EPS) Strain(s): 2170 PubMed: 26356114 DOI: 10.1016/j.biortech.2015.08.096 |
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Honda, R., Teraokab, Y., Noguchia, M., Yang, S.
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Optimization of hydraulic retention time and biomass concentration in microalgae biomass production from treated sewage with a membrane photobioreactor.
J. Water Environ. Technol.,
15,
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Keywords: membrane photobioreactor; microalgae; resource recovery from wastewater Strain(s): 2170 DOI: 10.2965/jwet.15-085 |
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Yoshida, T., Takashima, Y., Tomaru Y., Shirai, Y., Takao, Y., Hiroishi, S., Nagasaki, K.
2012
A protein binding to an upstream sequence of ftsZ involved in coordination of DNA replication and cell division in Microcystis aeruginosa.
Fish. Sci.,
78,
375-379.
Keywords: Cyanobacteria; Microcystis; Cell division; DNA replication; ftsZ Strain(s): 298 DOI: 10.1007/s12562-011-0442-8 |
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Hong, J. W., Kim, O. H., Jo, S. W., Kim, H., Jeong, M. R., Yoon, H. S.
2018
Characterization of alkane-producing Nostoc sp. isolated from a summer bloom for biofuel potential.
J. Biobased Mater. Bioenergy,
12,
244-251.
Keywords: Alkane-Producing Genes; Biofuel; Cyanobacteria; Heptadecane; Potential; Feedstoc Strain(s): 21, 2109 DOI: 10.1166/jbmb.2018.1757 |
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Hong, M. E., Choi, S. P., Park, Y. I., Kim, Y. K., Chang, W. S., Kim, B. W., Sim, S. J.
2012
Astaxanthin production by a highly photosensitive Haematococcus mutant.
Process Biochem.,
47,
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Keywords: Haematococcus pluvialis; Astaxanthin; Photo-inducible mutant; Photo-sensitivity Strain(s): 144 DOI: 10.1016/j.procbio.2012.07.007 |
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Hong, M. E.1, Choi, H. I., Kwak, H. S., Hwang, S. W., Sung, Y. J., Chang, W. S., Sim, S. J.
2018
Rapid selection of astaxanthin-hyperproducing Haematococcus mutant via azide-based colorimetric assay combined with oil-based astaxanthin extraction.
Bioresour. Technol.,
267,
175-181.
Keywords: Haematococcus pluvialis; Autotrophic astaxanthin production; High-throughput screening; Azide-based colorimetric assay; Oil-based astaxanthin extraction method Strain(s): 144 PubMed: 30014996 DOI: 10.1016/j.biortech.2018.07.033 |
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Hong, M.-E., Choi, Y. Y., Sim, S. J.
2016
Effect of red cyst cell inoculation and iron (II) supplementation on autotrophic astaxanthin production by Haematococcus pluvialis under outdoor summer conditions.
J. Biotechnol.,
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Keywords: Haematococcus pluvialis; Photoautotrophic culture; Astaxanthin; Summer outdoor conditions; Red cyst cell (aplanospore) inoculation method; Iron(Fe2+) supplementation method Strain(s): 144 PubMed: 26630998 DOI: 10.1016/j.jbiotec.2015.11.019 |
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Honjo, M., Matsui, K., Ueki, M., Nakamura, R., Fuhrman, J. A., Kawabata, Z.
2006
Diversity of virus-like agents killing Microcystis aeruginosa in a hyper-eutrophic pond.
J. Plankton Res.,
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Strain(s): 298 DOI: 10.1093/plankt/fbi128 |
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2017
Ultrastructure and molecular phylogenetic position of a new marine sand-dwellin dinoflagellate from British Columbia, Canada: Pseudadenoides polypyrenoides sp. nov. (Dinophyceae).
Eur. J. Phycol.,
52,
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Keywords: Benthic; morphology; phylogeny; Pseudadenoides kofoidii; taxonomy; ultrastructure Strain(s): 1367 DOI: 10.1080/09670262.2016.1274788 |
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Hori, K. Maruyama, F., Fujisawa, T., Togashi, T., Yamamoto, N., Seo, M., Sato, S., Yamada, T., Mori, H., Tajima, N., Moriyama, T., Ikeuchi, M., Watanabe, M., Wada, H., Kobayashi, K., Saito, M., Masuda, T., Sasaki-Sekimoto, Y., Mashiguchi, K., Awai, K., Shimojima, M., Masuda, S., Iwai, M., Nobusawa, T., Narise, T., Kondo, S., Saito, H., Sato, R., Murakawa, M., Ihara, Y., Oshima-Yamada, Y., Ohtaka, K., Satoh, M., Sonobe, K., Ishii, M., Ohtani, R., Kanamori-Sato, M., Honoki, R., Miyazaki, D., Mochizuki, H., Umetsu, J., Higashi, K., Shibata, D., Kamiya, Y., Sato, N., Nakamura, Y., Tabata, S., Ida, S., Kurokawa, K., Ohta, H.
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Klebsormidium flaccidum genome reveals primary factors for plant terrestrial adaptation.
Nat. Commun.,
5,
3978 (article ID).
Strain(s): 2285 PubMed: 24865297 DOI: 10.1038/ncomms4978 |
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Hori, S., Sekimoto, H., Abe, J.
2012
Properties of cell surface carbohydrates in sexual reproduction of the Closterium peracerosum–strigosum–littorale complex (Zygnematophyceae, Charophyta).
Phycol. Res.,
60,
254-260.
Keywords: cell-cell recognition; Closterium; ConcanavalinA; conjugation; lectin; Lycopersicon esculentum lectin; sexual reproduction Strain(s): 67, 68 DOI: 10.1111/j.1440-1835.2012.00656.x |
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Horiguchi, T.
1996
Haramonas dimorpha gen. et sp. nov. (Raphidophyceae), a new marine raphidophyte from Australian mangrove.
Phycol. Res.,
44,
143-150.
Keywords: Haramonas dimorpha gen et sp. nov.; mangrove; Raphidophyceae; taxonomy; tubular invagination; ultrastructure Strain(s): 716 DOI: 10.1111/j.1440-1835.1996.tb00043.x |
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Hoshina, R., Fujiwara, Y.
2013
Molecular characterization of Chlorella cultures of the National Institute for Environmental Studies culture collection with description of Micractinium inermum sp. nov., Didymogenes sphaerica sp. nov., Didymogenes soliella sp. nov., (Chlorellaceae, Trebouxiophyceae).
Phycol. Res.,
61,
124-132.
Keywords: Chlorella; Didymogenes; group 1 intron; internal transcribed spacer 2; Micractinium; species concept Strain(s): 2167, 2171, 2173, 2330 DOI: 10.1111/pre.12010 |
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Hoshina, R., Hayakawa, M. M., Kobayashi, M., Higuchi, R., Suzaki, T.
2020
Pediludiella daitoensis gen. et sp. nov. (Scenedesmaceae, Chlorophyceae), a large coccoid green alga isolated from a Loxodes ciliate.
Sci Rep,
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628 (article ID).
Strain(s): 4031 PubMed: 31959793 DOI: 10.1038/s41598-020-57423-x |
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Hoshina, R., Imamura, N.
2008
Eu-Chlorella large subunit rDNA sequences and group I introns in ribosomal DNA of the paramecian symbiotic alga NC64A.
Phycol. Res.,
56,
21-32.
Keywords: Chlorella vulgaris; group I intron; intron phylogeny; intron transposition; large subunit ribosomal DNA; NC64A Strain(s): 227 DOI: 10.1111/j.1440-1835.2008.00481.x |
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Hoshina, R., Imamura, N.
2009
Phylogenetically close group I introns with different positions among Paramecium bursaria photobionts imply a primitive stage of intron diversification.
Mol. Biol. Evol.,
26,
1309-1319.
Keywords: degenerative homing; intron diversification; intron transposition; Paramecium bursaria symbiotic algae; reverse splicing Strain(s): 2541 PubMed: 19279084 DOI: 10.1093/molbev/msp044 |
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Hoshina, R., Iwataki, M., Imamura, N.
2010
Chlorella variabilis and Micractinium reisseri sp. nov. (Chlorellaceae, Trebouxiophyceae): Redescription of the endosymbiotic green algae of Paramecium bursaria (Peniculia, Oligohymenophorea) in the 120th year.
Phycol. Res.,
58,
188-201.
Keywords: Chlorella variabilis; ITS2; Micractinium reisseri; Paramecium bursaria; species concept Strain(s): 2540, 2542 DOI: 10.1111/j.1440-1835.2010.00579.x |
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Hoshina, R., Kamako, S.-I., Imamura, N.
2004
Phylogenetic position of endosymbiotic green algae in Paramecium bursaria Ehrenberg from Japan.
Plant Biol.,
6,
447-453.
Keywords: 18S rDNA; Chlorella; endosymbiont; ITS; Paramecium bursaria; phylogeny Strain(s): 2540, 2541 DOI: 10.1055/s-2004-820888 |
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Hoshina, R., Kato, Y., Kamako, S., Imamura, N.
2005
Genetic evidence of "American" and "European" type symbiotic algae of Paramecium bursaria Ehrenberg.
Plant Biol.,
7,
526-532.
Keywords: 18S rDNA; "American"; "European"; Chlorella; ITS; Paramecium bursaria; Phylogeny Strain(s): 2540, 2541 DOI: 10.1055/s-2005-865912 |
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Hoshina, R., Kobayashi, M., Suzaki, T., Kusuoka, Y.
2018
Brandtia ciliaticola gen. et sp. nov. (Chlorellaceae, Trebouxiophyceae) a common symbiotic green coccoid of various ciliate species.
Phycol. Res.,
66,
76-81.
Keywords: Chlorella; genus definition; rRNA structure Strain(s): 4032, 4033, 4034 DOI: 10.1111/pre.12194 |
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Hosoi-Tanabe, S., Honda, D., Fukaya, S., Otake, I., Inagaki, Y., Sako, Y.
2007
Proposal of Pseudochattonella verruculosa gen. nov., comb. nov. (Dictyochophyceae) for a formar rephidophycean alga Chattonella verruculosa, based on 18S rDNA phylogeny and ultrastructural characteristics.
Phycol. Res.,
55,
185-192.
Keywords: Chatonella verruculosa; Dictyochophyceae; flagellar apparatus; harmful algal bloom; phylogenetic analysis; Pseudochattonella verruculosa; Raphidophyceae Strain(s): 670 DOI: 10.1111/j.1440-1835.2007.00461.x |
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Hosoi-Tanabe, S., Otake, I., Sako, Y.
2006
Phylogenetic analysis of noxious red tide flagellates Chattonella antiqua, C. marina, C. ovata, and C. verruculosa (Raphidophyceae) based on the rRNA gene family.
Fish. Sci.,
72,
1200-1208.
Keywords: Chattonella; genetic homogeneity; phylogenetic analysis; Raphidophyceae; rRNA gene family Strain(s): 1, 5, 86, 121, 558, 559, 603, 670 DOI: 10.1111/j.1444-2906.2006.01277.x |
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Hosoi-Tanabe, S., Sako, Y.
2005
Species-specific detection and quantification of toxic marine Dinoflagellates Alexandrium tamarense and A. catenella by reai-time PCR assay.
Mar. Biotechnol.,
7,
506-514.
Keywords: toxic dinoflagellate; — Alexandrium; paralytic shellfish poisoning (PSP); real-time PCR; species-specific identification; quantification Strain(s): 1, 7, 12, 293, 331, 559, 603, 670 PubMed: 16007374 DOI: 10.1007/s10126-004-4128-4 |
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Hosokawa, Y., Miki-Noumura, T.
1987
Bending motion of Chlamydomonas axonemes after extrusion of central-pair microtubules.
J. Cell Biol.,
105,
1297-1301.
Strain(s): 2239 |
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Hosomi, M., Sudo, R.
1979
Studies on the effects of sediments on algal growth - Algal growth potential of sediments.
Res. Rep. Natl. Inst. Environ. Stud.,
No. 6,
115-121 (in Japanese with English summary).
Strain(s): 35 |
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Hosoya, R., Hamana, K., Isobe, M., Yokota, A.
2005
Polyamine distribution profiles within Cyanobacteria.
Microbiol. Cult. Coll.,
21,
3-8.
Keywords: cyanobacteria; homospermidine; polyamine; spermidine Strain(s): 19, 21, 22, 28, 30, 34, 37, 41, 44, 45, 50, 73, 78, 79, 80, 81, 204, 208, 510, 512, 515, 592, 593, 610, 843, 846, 847, 2093, 2096, 2098, 2100, 2102, 2107, 2108, 2118, 2119, 2123, 2124, 2125, 2126, 2128, 2129, 2131, 2132, 3259, 3275, 3276, 3277 |
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Houdai, T., Matsuoka, S., Matsumori, N., Murata, M.
2004
Membrane-permeabilizing activities of amphidinol 3, polyene-polyhydroxy antifungal from a marine dinoflagellate.
Biochem. Biophys. Acta,
1667,
91-100.
Keywords: amphidinol; Amphidinium klebsii; amphotericin B Strain(s): 613 PubMed: 15533309 DOI: 10.1016/j.bbamem.2004.09.002 |
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Houdai, T., Matsuoka, S., Morsy, N., Matsumori, N., Satake, M., Murata, M.
2005
Hairpin conformation of amphidinols possibly accounting for potent membrane permeabilizing activities.
Tetrahedron,
61,
2795-2802.
Keywords: amphidinol membrane-permeabilizaion Strain(s): 613 DOI: 10.1016/j.tet.2005.01.069 |
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Houdai, T., Matsuoka, S., Murata, M., Satake, M., Ota, S., Oshima, Y., Rhodes, L. L.
2001
Acetate labeling patterns of dinoflagellate polyketides, amphidinols 2, 3 and 4.
Tetrahedron,
57,
5551-5555.
Keywords: dinoflagellate; polyketides; biosynthesis; amphidinol; Amphidinium; isotopic labelling Strain(s): 613 DOI: 10.1016/S0040-4020(01)00481-1 |
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Houndan, A., Billard, C., Marie, D., Not, F., Sáez, A. G., Young, J. R., Probert, I.
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Holococcolithophore-heterococcolithophore (Haptophyta) life cycles: flow cytometric analysis of relative ploidy levels.
Systematics and Biodiversity,
4,
453-465.
Keywords: Coccolithophore; haplo-diploid; Haptophyta; heterococcolith; holococcolith; life cycle; microalgae; ploidy Strain(s): 2694, 2697 DOI: 10.1017/S1477200003001270 |
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Hovde, B. T., Deodato, C. R., Andersen, R. A., Starkenburg, S. R., Barlow, S.B., Cattolico, R.A.
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Chrysochromulina: Genomic assessment and taxonomic diagnosis of the type species for an oleaginous algal clade.
Algal Res.,
37,
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Keywords: Haptophyta; Chrysochromulina genome; nad evolution; FtsZ phylogeny; Meiosis; Taxon diagnosis Strain(s): 562 DOI: 10.1016/j.algal.2018.11.023 |
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Howe, A. T., Bass, D., Vickerman, K., Chao, E. E., Cavalier-Smith, T.
2009
Phylogeny, taxonomy, and astounding genetic diversity of Glissomonadida ord. nov., the dominant gliding zooflagellates in soil (Protozoa: Cercozoa).
Protist,
160,
159-189.
Keywords: Glissomonadida; Sandonidae; Allapsidae; Bodomorphidae; Heteromita; phylogeny Strain(s): 2414, 2415, 2417, 2418, 2419, 2421, 2422, 2423, 2424, 2425, 2426, 2427, 2428, 2429, 2430 PubMed: 19324594 DOI: 10.1016/j.protis.2008.11.007 |
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Htet, AN., Noguchi, M., Ninomiya, K., Tsuge, Y., Kuroda, K., Kajita, S., Masai, E., Katayama, Y., Shikinaka, K., Otsuka, Y., Nakamura, M., Honda, R., Takahashi, K.
2018
Application of microalgae hydrolysate as a fermentation medium for microbial production of 2-pyrone 4,6-dicarboxylic acid.
J. Biosci. Bioeng.,
125,
717-722.
Keywords: Microalgae; Chlorella emersonii; Acid hydrolysis; Fermentation; Escherichia coli; 2-pyrone 4,6-dicarboxylic acid Strain(s): 2151 PubMed: 29395960 DOI: 10.1016/j.jbiosc.2017.12.026 |
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Hu, ZY., Li, YT., Sommerfeld, M., Chen, F., Hu, Q.
2008
Enhanced protection against oxidative stress in an astaxanthin-overproduction Haematococcus mutant (Chlorophyceae).
Eur. J. Phycol.,
43,
365-376.
Keywords: astaxanthin; carotenogenesis; flow cytometry; Haematococcus pluvialis; oxidative stress; pigment mutant Strain(s): 144 DOI: 10.1080/09670260802227736 |
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Hua, C., Ludsinb, S. A., Martinc, J. F., Dittmannd, E., Lee, J.
2018
Mycosporine-like amino acids (MAAs)—producing Microcystis in Lake Erie:Development of a qPCR assay and insight into its ecology.
Harmful Algae,
77,
1–10.
Keywords: Shinorine; Porphyra; UV irradiation; Sunscreen; Eutrophication; Harmful algal bloom Strain(s): 843 PubMed: 30005796 DOI: 10.1016/j.hal.2018.05.010 |
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Hua, J., Lee, R.W.
2012
Factors affecting codon bias in the mitochondrial genomes of the Streptophyte Mesostigma viride and the Chlorophyte Chlamydomonas reinhardtii.
J. Eucaryot. Microbiol.,
59,
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Keywords: Green algae; mutation; selection; synonymous codon usage Strain(s): 296 PubMed: 22340021 DOI: 10.1111/j.1550-7408.2011.00613.x |
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Hua, JM., Smith, D. R., Borza, T., Lee, R. W.
2012
Similar relative mutation rates in the three genetic compartments of Mesostigma and Chlamydomonas.
Protist,
163,
105-115.
Keywords: Chlamydomonas; genome architecture; Mesostigma; mutation rate; silent substitution rate Strain(s): 296, 476 PubMed: 21621456 DOI: 10.1016/j.protis.2011.04.003 |
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Huang, Y., Lee, H., Lai, C.
2013
Engineering of the growth environment of microalgae with high biomass and lipid productivity.
J. Nanosci. Nanotechnol.,
13,
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Keywords: Microalgae; Cultivation Environment; Carbon Dioxide; Biomass Productivity; Lipid Productivity Strain(s): 2199 DOI: 10.1166/jnn.2013.6877 |
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Huang, Y.-T., Su, C.-P.
2014
High lipid content and productivity of microalgae cultivating under elevated carbon dioxide.
Int. J. Environ. Sci. Technol.,
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703-710.
Keywords: Biodiesel; Chlorella; Global warming; Light intensity Strain(s): 2173 DOI: 10.1007/s13762-013-0251-y |
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Huang, Y-T., Lai, C-W., Wu, B-W., Lin, K-S., Wu, J.C.S., Md Shahriar A Hossain, Yamauchi, Y., Wu, C.-W.
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Advances in bioconversion of microalgae with high biomass and lipid productivity.
J. Taiwan Inst. Chem. Eng.,
79,
37-42.
Keywords: Bioconversion; Fatty acid; methyl esters; Illumination; Microalgae Strain(s): 2199 DOI: 10.1016/j.jtice.2017.05.026 |
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Extensive horizontal gene transfer, duplication, and loss of chlorophyll synthesis genes in the algae.
BMC Evol. Biol.,
15,
16 (article ID).
Keywords: Chlorophyll synthesis; Horizontal gene transfer; Endosymbiotic gene transfer; Gene duplication; Algae; Protochlorophyllide Strain(s): 293, 360, 484, 1363, 2140 PubMed: 25887237 DOI: 10.1186/s12862-015-0286-4 |
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Deoxyribonucleic acid reassociation in the taxonomy of the genus Chlorella.
Arch. Mikrobiol.,
150,
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Acidic cultivation of Haematococcus pluvialis for improved astaxanthin production in the presence of a lethal fungus.
Bioresour. Technol.,
278,
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Keywords: Haematococcus pluvialis; Paraphysoderma sedebokerensis; Acidic cultivation; Stress relief; Astaxant Strain(s): 144 PubMed: 30685617 DOI: 10.1016/j.biortech.2019.01.080 |
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Sexual cell division and conjugation-papilla formation in sexual reproduction of Closterium strigosum.
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Culture of microalgae (6).
Iden,
27,
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Strain(s): 66, 173, 175, 179, 180, 181, 183, 198, 262, 338, 450 |
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Ichimura, T.
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The life cycle and its control in some species of Closterium, with special reference to the biological species problems.
Thesis D. Sci., University of Tokyo,
69 pp., 11 tables, 40 figs.
Strain(s): 66, 67, 68, 124, 125, 127, 174, 175, 176, 177, 179, 180, 181, 182, 183, 185, 198, 202, 262, 337, 338, 450, 451 |
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Ichimura, T.
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Mating types and reproductive isolation in Closterium ehrenbergii Meneghini.
Bot. Mag. Tokyo,
94,
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Keywords: biosystematic study; Closterium ehrenbergii; mating group; mating type; reproductive isolation Strain(s): 228, 229 DOI: 10.1007/BF02493393 |
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Ichimura, T.
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Hybrid inviability and predominant survival of mating type minus progeny in laboratory crosses between two closely related mating groups of Closterium ehrenbergii.
Evolution,
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Strain(s): 228, 229 |
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Ichimura, T.
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Chlamydomonas pulsatilla Wollenweber from a supra-littoral rockpool on a small island offshore the city of Muroran, Hokkaido, Japan.
Algol. Stud.,
85,
23-29.
Keywords: Chlamydomonas pulsatilla; euryhaline species; acetate; nutrition; supra-littoral rockpool Strain(s): 122 |
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Ichimura, T., Itoh, T.
1977
17. Preservation methods of microalgae (I) [17. Bisaisôrui no hozonhô (I)].
In Preservation methods of microorganisms [Biseibutsu Hozonhô], Ed. by Nei, T., University of Tokyo Press, Tokyo,
p. 355-373 (in Japanese without English title).
Strain(s): 19, 21, 22, 23, 24, 27, 28, 30, 31, 32, 33, 34, 36, 37, 38, 39, 40, 41, 44, 45, 46, 47, 48, 49, 50, 122, 123, 127, 131, 144, 152, 173, 175, 179, 180, 181, 182, 183, 185, 198, 200, 203, 206, 217, 226, 227, 241, 266, 267, 268, 271, 295, 309, 310, 334, 338, 379, 436, 448, 450, 455, 527 |
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Ichimura, T., Kasai, F.
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Post-zygotic isolation between allopatric mating groups of Closterium ehrenbergii Meneghini (Conjugato-phyceae).
Phycologia,
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Strain(s): 228, 229 DOI: 10.2216/i0031-8884-23-1-77.1 |
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Ichimura, T., Kasai, F.
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Time lapse analyses of sexual reproduction in Closterium ehrenbergii (Conjugatophyceae).
J. Phycol.,
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Keywords: Closterium ehrenbergii; conjugation; desmids; mating type; sexual reproduction Strain(s): 228, 229 DOI: 10.1111/j.0022-3646.1984.00258.x |
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Ichimura, T., Kasai, F.
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Studies on the life cycle of Spinoclosterium cuspidatum (Bailey) Hirano (Conjugatophyceae).
Phycologia,
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Strain(s): 325 DOI: 10.2216/i0031-8884-24-2-205.1 |
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Ichimura, T., Kasai, F.
1987
Time-lapse analyses of sexual isolation between two closely related mating groups of the Closterium ehrenbergii species complex (Chlorophyta).
J. Phycol.,
23,
523-534.
Keywords: Closterium ehrenbergii; desmids; mating group; multiple-choice mating; no-choice mating; sexual interactions; sexual isolation; time-lapse photomicrography Strain(s): 228, 229 DOI: 10.1111/j.1529-8817.1987.tb04201.x |
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Life cycles of homothallic and heterothallic clones of Triploceras gracile Bailey (Desmidiaceae, Chlorophyta).
Phycologia,
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Strain(s): 789, 790, 791, 792, 793, 794, 795, 796 DOI: 10.2216/i0031-8884-28-2-212.1 |
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The Closterium calosporum complex from the Ryukyu Islands - Variation and taxonomical problems.
Mem. Natn. Sci. Mus. Tokyo,
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An axenic clone of Microcystis aeruginosa Kutz. emend. Elenkin from Lake Kasumigaura.
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Diversity and oceanic distribution of the Parmales (Bolidophyceae), a picoplanktonic group closely related to diatoms.
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Growth characteristics and vertical distribution of Triparma laevis (Parmales) during summer in the Oyashio region, western North Pacific.
Aquat. Microb. Ecol.,
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Keywords: Triparma laevis; Parmales; Vertical distribution; Growth characteristics; Oyashio region Strain(s): 2565 DOI: 10.3354/ame01606 |
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Isolation and characterization of Parmales (Heterokonta/Heterokontophyta/Stramenopiles) from the Oyashio region, Western North Pacific.
J. Phycol.,
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Keywords: Bolidophyceae; diatoms; heterokonts; Parmales; PDMPO; phylogeny; stramenopiles; Triparma laevis Strain(s): 2565, 2682 PubMed: 27021720 DOI: 10.1111/j.1529-8817.2010.00926.x |
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Cytological analyses by advanced electron microscopy.
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129-151.
Keywords: FIB-SEM; SBF-SEM; EM-tomography; EM (electron microscopy); Block-face imaging; Cryo-TEM; Cryo-TEM tomography; Cyanidioschyzon merolae; Physical fixation Strain(s): 1804 DOI: 10.1007/978-981-10-6101-1_9 |
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Kinetic analysis of the growth of Chlorella vulgaris.
Biotech. Bioeng.,
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Embryogenesis and positioning in Platydorina caudata (Volvocaceae, Chlorophyta).
Phycologia,
50,
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Keywords: Volvocaceae; inversion; intercalation; cytoplasmic bridge; stalk; colony formation Strain(s): 728, 729 DOI: 10.2216/10-80.1 |
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Cleavage, incomplete inversion, and cytoplasmic bridges in Gonium pectorale (Volvocales, Chlorophyta).
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Assessing the monophyly of chlorophyll-c containing plastids by multi-gene phylogenies under the unlinked model conditions.
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Keywords: chromist; chromalveolate; secondary endosymbiosis; model misspecification; separate model; concatenate model Strain(s): 1, 15, 548, 670, 716 PubMed: 17591448 DOI: 10.1016/j.ympev.2007.05.003 |
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Intermediate features of cyanelle division of Cyanophora paradoxa (Glaucocystophyta) between cyanobacterial and plastid division.
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Keywords: chloroplast division; cyanelle; Cyanophora paradoxa; endosymbiosis; Glaucocystophyta; peptidoglycan; plastid dividing-ring; plastid division; plastid envelope Strain(s): 547 DOI: 10.1046/j.1529-8817.2003.02132.x |
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Chemotaxis toward inorganic phosphate in the red tide alga Chattonella antiqua.
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First report of Microcystis strains producing MC-FR and -WR toxins in Japan.
Toxins,
11,
521 (article ID).
Keywords: Cyanobacteria; Microcystis; microcystins; environmental water; liquid chromatographymass spectrometry; protein phosphatase 2A inhibition assay Strain(s): 4344, 4345 PubMed: 31505765 DOI: 10.3390/toxins11090521 |
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Ikushima, T.
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Action of furylfuramide (AF-2) on chloroplasts of Euglena gracilis.
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Effects of aquatic humic substances on the growth of the cyanobacterium Microcystis aeruginosa.
J. Jpn. Soc. Wat. Environ. [Mizukankyô Gakkai Shi],
22,
555-560 (in Japanese with English summary).
Keywords: aquatic humic substances; Microcystis aeruginosa; iron limitation; siderophore; Lake Kasumigaura Strain(s): 98 |
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Imai, A., Fukushima, T., Matsushige, K.
1999
Effects of iron limitation and aquatic humic substances on the growth of Microcystis aeruginosa.
Can. J. Fish. Aquat. Sci.,
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Imai, I., Fujimaru, D., Nishigaki, T.
2002
Co-culture of fish with macroalgae and associated bacteria: A possible mitigation strategy for noxious red tides in enclosed coastal sea.
Fish. Sci.,
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Keywords: red tide; mitigation; algicidal bacteria; macroalgae; co-culture of fish and macroalgae Strain(s): 1 DOI: 10.2331/fishsci.68.sup1_493 |
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Imai, I., Hatano, M., Naito, K.
2004
Development of a chemically defined artificial medium for marine red tide-causing raphidophycean flagellates.
Plankton Biol. Ecol.,
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Keywords: Chattonella; Fibrocapsa; artificial media; molybdenum; iodine Strain(s): 1 |
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Imai, I., Ishida, Y., Hata, Y.
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Killing of marine phytoplankton by a gliding bacterium Cytophaga sp., isolated from the coastal sea of Japan.
Mar. Biol.,
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Imai, I., Ishida, Y., Sakaguchi, K., Hata, Y.
1995
Algicidal marine bacteria isolated from northern Hiroshima Bay, Japan.
Fish. Sci.,
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628-636.
Keywords: algicidal bacteria; red tide; Chattonella; Alteromonas Strain(s): 1 DOI: 10.2331/fishsci.61.628 |
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Imai, I., Ishida, Y., Sawayama, S., Hata, Y.
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Isolation of a marine gliding bacterium that kills Chattonella antiqua (Raphidophyceae).
Nippon Suisan Gakkaishi,
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Imai, I., Kim, M. C., Nagasaki, K., Itakura, S., Ishida, Y.
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Detection and enumeration of microorganisms that are lethal to harmful phytoplankton in coastal waters.
Plankton Biol. Ecol.,
45,
19-29.
Keywords: red tide; Chattonella; Heterosigma; killer bacteria; viruses Strain(s): 1 |
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Imai, I., Kim, M. C., Nagasaki, K., Itakura, S., Ishida, Y.
1998
Relationships between dynamics of red tide-causing raphidophycean flagellates and algicidal micro-organisms in the coastal sea of Japan.
Phycol. Res.,
46,
139-146.
Keywords: algicidal bacteria; Chattonella; Heterosigma; Raphidophyceae; red tide; virus Strain(s): 1 DOI: 10.1111/j.1440-1835.1998.tb00106.x |
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Imai, I., Nakagiri, S., Nagai, K., Nagasaki, K., Itakura, S., Yamaguchi, M.
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Fluctuations of algicidal microorganisms against the harmful dinoflagellate Heterocapsa circularisquama in Ago Bay, Mie Prefecture, Japan.
Bull. Nansei Natl. Fish. Res. Inst.,
31,
53-61 (in Japanese with English summary).
Keywords: red tide; Heterocapsa circularisquama; algicidal bacteria; viruses; Ago Bay Strain(s): 1 |
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Imaizumi, M., Sekimoto, H., Noguchi, T.
2007
Induction of sex pheromone secretion and observations of the secretory pathway in the Closterium peracerosum-strigosum-littorale complex.
Plant Sci.,
173,
206-212.
Keywords: Closterium peracerosum-strigosum-littorale; Immunoelectron microscopy; Protoplast release-inducing protein; Sex pheromone; Sexual reproduction; Zygote formation Strain(s): 67, 68 DOI: 10.1016/j.plantsci.2007.05.002 |
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Imamura, N., Motoike, I., Noda, M., Adachi, K., Konno, A., Fukami, H.
2000
Argimicin A, a novel anti-cyanobacterial compound produced by an algae-lysing bacterium.
J. Antibiotics,
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Imamura, N., Motoike, I., Shimada, N., Nishikori, M., Morisaki, H., Fukami, H.
2001
An efficient screening approach for anti-Microcystis compounds based on knowledge of aquatic microbial ecosystem.
J. Antibiotics,
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Strain(s): 102, 228 PubMed: 11560377 DOI: 10.7164/antibiotics.54.582 |
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Imamura, S., Hanaoka, M., Tanaka, K.
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The plant-specific TFIIB-related protein, pBrp, is a general transcription factor for RNA polymerase I.
EMBO J.,
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Strain(s): 3377 PubMed: 18668124 DOI: 10.1038/emboj.2008.151 |
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Imamura, S., Kanesaki, Y., Ohnuma, M., Inouye, T., Sekine, Y., Fujiwara, T., Kuroiwa, T., Tanaka, K.
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R2R3-type MYB transcription factor, CmMYB1, is a central nitrogen assimilation regulator in Cyanidioschyzon merolae.
Proc. Nati. Acad. Sci. U. S. A.,
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Strain(s): 3377 PubMed: 1959251 DOI: 10.1073/pnas.0902790106 |
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Imamura, S., Nomura, Y., Takemura, T., Pancha, I., Taki, K., Toguchi, K., Tozawa, Y., Tanaka K.
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The checkpoint kinase TOR (target of rapamycin) regulates expression of a nuclear‐encoded chloroplast RelA‐SpoT homolog (RSH) and modulates chloroplast ribosomal RNA synthesis in a unicellular red alga.
Plant J.,
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Keywords: RelA-SpoT homolog; ppGpp; red alga; ribosomal RNA; target of rapamycin Strain(s): 3377 PubMed: 29441718 DOI: 10.1111/tpj.13859 |
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Imamura, S., Terashita, M., Ohnuma, M., Maruyama, S., Minoda, A., Weber, A. P. M., Inouye, T., Sekine, Y., Fujita, Y., Omata, T., Tanaka, K.
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Nitrate assimilatory genes and their transcriptional regulation in a unicellular red alga Cyanidioschyzon merolae: genetic evidence for nitrite reduction by a sulfite reductase-like enzyme.
Plant Cell Physiol.,
51,
707-717.
Keywords: Cyanidioschyzon merolae; Nitrate assimilation; Nitrite reductase; Nitrogen regulation; Red alga; Sulfite reductase Strain(s): 3377 PubMed: 20375110 DOI: 10.1093/pcp/pcq043 |
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Application of MALDI Biotyper to cyanobacterial profiling.
Rapid Commun. Mass Spectrom.,
31,
325-332.
Strain(s): 73, 89, 102, 103, 107, 112, 298, 611, 808, 809, 835, 843, 989, 1025, 1043, 1058, 1071, 1099, 1642, 1652, 1672 PubMed: 27862451 DOI: 10.1002/rcm.7793 |
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Estimating the viability of Chlorella exposed to oxidative stresses based around photocatalysis.
Int. Biodeterior. Biodegrad.,
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Keywords: Autofluorescence; Cell staining; Chlorella sorokiniana; Oxidative stress: TiO2 photocatalysis; Viability assay Strain(s): 2169 DOI: 10.1016/j.ibiod.2012.12.006 |
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Imoto, Y., Kuroiwa, H., Yoshida, Y., Ohnuma, M., Fujiwara, T., Yoshida, M., Nishida, K., Yagisawa, F., Hirooka, S., Miyagishima, S.Y., Misumi, O., Kawano, S., Kuroiwa, T.
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Single-membrane-bound peroxisome division revealed by isolation of dynamin-based machinery.
Proc. Nati. Acad. Sci. U. S. A.,
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Dynamics of seagrass bed microbial communities in artificial Chattonella blooms: A laboratory microcosm study.
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2014
Temporal and spatial distribution of algicidal and growth-inhibiting bacteria in the coastal sea of southwest Japan.
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1958
Stimulatory and inhibitory effect of light on the nitrate assimilation by Chlorella.
J. Gen. Appl. Microbiol.,
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Inagaki, Y., Ehara, M., Watanabe, K. I., Hayashi-Ishimaru, Y., Ohama, T.
1998
Directionally evolving genetic code: the UGA codon from stop to tryptophan in mitochondria.
J. Mol. Evol.,
47,
378-384.
Keywords: COXI phylogenetic tree; UGA codon; deviant genetic code; directional codon reassignment Strain(s): 12, 227, 274 PubMed: 9767683 DOI: 10.1007/PL00006395 |
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Inagaki, Y., Hayashi-Ishimaru, Y., Ehara, M., Igarashi, I., Ohama, T.
1997
Algae or protozoa: phylogenetic position of euglenophytes and dinoflagellates as inferred from mitochondrial sequences.
J. Mol. Evol.,
45,
295-300.
Keywords: mitochondrial COXI gene; Dinoflagellata; Apicomplexa; Kinetoplastida; Euglenophyta; endosymbiosis; genetic code; malarian circle Strain(s): 12, 369, 381 DOI: 10.1007/PL00006233 |
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Inamori, Y., Ohno, Y., Kaya, K., Watanabe, M. M., Sudo, R.
1990
Studies on the removal and decomposition of Microcystis viridis toxic substance in the bio-film reactor.
Jpn. J. Water Poll. Res.,
13,
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Keywords: Microcystis viridis; toxic substance cyanoviridin; bio-film reactor; hydraulic retention time Strain(s): 102 |
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Inamura, E., Katayama, T., Taguchi, S.
2017
Absorption of low-dose ultraviolet radiation by mycosporine-like amino acids induced by the dinoflagellate Prorocentrum micans.
Plankton Benthos Res.,
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Keywords: mycosporine-glycine; palythene; palythine; porphyra-334; shinorine Strain(s): 218 DOI: 10.3800/pbr.12.15 |
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Inoue, Y., Hata, T., Kawai, S., Okamura,H., Nishida, T.
2010
Elimination and detoxification of triclosan by manganese peroxidase from white rot fungus.
J. Hazard. Mater.,
180,
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Keywords: Triclosan; Bacterial growth inhibition; Algal growth inhibition; Manganese peroxidase; Ligninolytic enzymes; White rot fungi Strain(s): 35 PubMed: 20434837 DOI: 10.1016/j.jhazmat.2010.04.024 |
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Inoue-Sakamoto, K., Tanji, Y., Yamaba, M., Natsume, T., Masaura, T., Asano, T., Nishiuchi, T., Sakamoto, T.
2018
Characterization of extracellular matrix components from the desiccation-tolerant cyanobacterium Nostoc commune.
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Keywords: anhydrobiosis; desiccation tolerance; extracellular polysaccharide (EPS); superoxide dismutase (SOD); water stress protein (WspA) Strain(s): 2108, 2538, 3989, 3990, 3991 PubMed: 29225284 DOI: 10.2323/jgam.2017.03.001 |
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Ioki, M., Ohkoshi, M., Nakajima, N., Nakahira-Yanaka, Y., Watanabe, M. M.
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Isolation of herbicide-resistant mutants of Botryococcus braunii.
Bioresour. Technol.,
109,
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Keywords: Botryococcus braunii; Paraquat; Methyl viologen; Basta; Glufosinate Strain(s): 35, 119, 227, 230, 2235 DOI: 10.1016/j.biortech.2011.07.101 |
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One-pot, simultaneous cell wall disruption and complete extraction of astaxanthin from Haematococcus pluvialis at room temperature.
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Keywords: Haematococcus pluvialis; One-pot method; Cell wall disruption; Extraction; Astaxanthin; Antioxidant activity; GRAS solvent Strain(s): 144 DOI: 10.1021/acssuschemeng.9b02089 |
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Isaka, N., Kawai-Toyooka, H., Matsuzaki, R., Nakada, T., Nozaki, H.
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Description of two new monoecious species of Volvox sect. Volvox (Volvocaceae, Chlorophyceae), based on comparative morphology and molecular phylogeny of cultured material.
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Keywords: Chlorophyceae; cultures; molecular phylogeny; morphology; taxonomy; Volvocaceae; Volvox ferrisii sp. nov.; Volvox kirkiorum sp. nov.; Volvox sect. Volvox Strain(s): 543, 2736, 2737, 2738, 2739, 2740 PubMed: 27011093 DOI: 10.1111/j.1529-8817.2012.01142.x |
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A blue-light-activated adenylyl cyclase mediates photoavoidance in Euglena gracilis.
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Culture conditions and characteristics of offensive odor-producing substance in the genus Uroglena [Uroglena zoku no baiyôjôken to syûkibusshitsu tokusei].
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Strain(s): 395 |
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Environ. Eng. Res. [Kankyô-kôgaku Kenkyû Ronbunshû],
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Keywords: musty odor; Phormidium tenue; Uroglena americana; fuzzy neural network; wind speed Strain(s): 512 |
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Four new microginins, linear peptides from the cyanobacterium Microcystis aeruginosa.
Tetrahedron,
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Micropeptins 88-A to 88-F, chymotrypsin inhibitors from the cyanobacterium Microcystis aeruginosa (NIES-88).
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Kawaguchipeptin A, a novel cyclic undecapeptide from cyanobacterium Microcystis aeruginosa (NIES-88).
Tetrahedron,
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Ishida, K., Matsuda, H., Murakami, M., Yamaguchi, K.
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The absolute stereochemistry of micropeptin 90.
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Ishida, K., Matsuda, H., Murakami, M., Yamaguchi, K.
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Kawaguchipeptin B, an antibacterial cyclic undecapeptide from the cyanobacterium Microcystis aeruginosa.
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Microginins 299-A and -B, leucine aminopeptidase inhibitors from the cyanobacterium Microcystis aeruginosa (NIES-299).
Tetrahedron,
53,
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Micropeptins 478-A and -B, plasmin inhibitors from the cyanobacterium Microcystis aeruginosa.
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Ishida, K., Murakami, M., Matsuda, H., Yamaguchi, K.
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Micropeptin 90, a plasmin and trypsin inhibitor from the blue-green alga Microcystis aeruginosa (NIES-90).
Tetrahedron Letters,
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Microcyclamide, a cytotoxic cyclic hexapeptide from the cyanobacterium Microcystis aeruginosa.
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Aeruginosins, protease inhibitors from the cyanobacterium Microcystis aeruginosa.
Tetrahedron,
55,
10971-10988.
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Evidence for polyphyletic origin of the members of the orders of Oscillatoriales and Pleurocapsales as determined by 16S rDNA analysis.
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Phylogenetic relationships of filamentous cyanobacterial taxa inferred from 16S rRNA sequence divergence.
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Characteristic structures of Spirulina trichome involved in gliding movement.
Plant Morphol.,
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Distribution and phylogeny of the blue light receptors aureochromes in eukaryotes.
Planta,
230,
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Four species of Cryptomonas (Class Cryptophyceae) in Japan.
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Gene,
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Microviridin: a novel tricyclic depsipeptide from the toxic cyanobacterium Microcystis viridis.
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Cylindrical phycobilisomes from a blue-green alga, Anabaena variabilis.
Plant Cell Physiol.,
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Keywords: blue-green alga (Anabaena variabilis); electron micrograph; cylindrical phycobilisomes; phycobilisomes; protein assembly Strain(s): 2093 DOI: 10.1093/oxfordjournals.pcp.a076481 |
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Isono, T., Katoh, T.
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Subparticles of Anabaena phycobilisomes. 1. Reconstruction of allophycocyanin cores and entire phycobilisomes.
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Studies on the growth limiting nutrients of red tide plankton in the tidal area [Kanchô-iki ni okeru akashio gen'in sôrui no zôshoku yokusei inshi no suitei].
Proc. Coast. Engineering, JSCE [Kaigan Kôgaku Ronbun-shû],
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Strain(s): 323 |
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Oscillapeptins A to F, serine protease inhibitors from the three strains of Oscillatoria agardhii.
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Two structural isomeric siderophores from the freshwater cyanobacterium Anabaena cylindrica (NIES-19).
Tetrahedron,
57,
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Keywords: iron; sidenophore; cyanobacteria; Anabaena cylindrica; CAS Strain(s): 19 DOI: 10.1016/S0040-4020(01)00934-6 |
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Itou, Y., Suzuki, S., Ishida, K., Murakami, M.
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Anabaenopeptins G and H, potent carboxypeptidase A inhibitors from the cyanobacterium Oscillatoria agardhii (NIES-595).
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1999
Applicability of environmental microorganisms to alkaline single cell gel electrophoresis (comet) assay.
Jpn. J. Water Treat. Biol.,
35,
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Keywords: comet assay; DNA damage; environmental microorganisms; Euglena gracilis; cell lysis; unwinding; electrophoresis; SDS; γ-irradiation Strain(s): 49, 122, 403 |
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Iwahori, K., Miyata, N., Yamamoto, Y., Sone, D., Aoyama, K.
2004
Normalization of DNA damage indices in comet assay for comparing with various mutagenicity tests.
Jpn. J. Water Treat. Biol.,
40,
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Manipulation of oil synthesis in Nannochloropsis strain NIES-2145 with a phosphorus starvation–inducible promoter from Chlamydomonas reinhardtii.
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912 (article ID).
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Photosynthetic endosymbionts benefit from host’s phagotrophy, including predation on potential competitors.
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Degradation characteris-tics of toxic Microcystis viridis by Mastigophora, Monas guttula using aquatic large scale microcosm.
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A novel glycolate oxidase requiring flavin mononucleotide as the cofactor in the prasinophycean alga Mesostigma viride.
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Characterization of NADH nitrate reductase from the coccolithophorid Emiliania huxleyi (Lohman) Hay & Mohler (Haptophyceae).
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Iwamoto, K., Shiraiwa, Y.
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Characterization of intracellular iodine accumulation by iodine-tolerant microalgae.
Procedia Environ. Sco.,
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34-42.
Keywords: growth stimulation; growth inhibition; haptophyte; iodine; iodine accumulation Strain(s): 377, 837, 838 DOI: 10.1016/j.proenv.2012.05.007 |
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Iwamoto, K., Shiraiwa, Y.
2017
Accumulation of cesium by aquatic plants and algae.
In Impact of Cesium on Plants and the Environment, Eds. by Gupta, D. & Walther, C., Springer International Publishing,
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Keywords: Eustigmatophycean alga; Vacuoliviride crystalliferum; Fukushima 1st Nuclear Power Plant Accident; High cesium-accumulating microalgae; Phytoremediation; Radioactive cesium Strain(s): 329, 1458, 2131, 2352 DOI: 10.1007/978-3-319-41525-3_10 |
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1960
Distribution of nucleic acids among subcellular fractions of Chlorella.
Biochim. Biophys. Acta,
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Iwamura, T.
1962
Cellular distributions and properties of nucleic acid species in Chlorella.
In Symposium in Institute of Applied Microbiology, University of Tokyo, Vol. III,
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Strain(s): 2170 |
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Iwamura, T.
1962
Characterization of the turnover of chloroplast deoxyribonucleic acid in Chlorella.
Biochim. Biophys. Acta,
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Strain(s): 2170 DOI: 10.1016/0926-6550(62)90155-X |
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Iwamura, T.
1965
Change of nucleic acid content in Chlorella cells during the course of their life-cycle.
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Iwamura, T.
1966
Nucleic acid in chloroplasts and metabolic DNA.
Progr. Nucl. Acid Res. Mol. Biol.,
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1970
Phylogenetic aspects of algal biochemistry (1) DNA species in algae.
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Iwamura, T.
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The feasibility of Chlorella as the exchanger of CO2 for O2 and the food resources in the space station.
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Strain(s): 2170 |
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Iwamura, T., Aoshima, J.
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Multiplication of chloroplast DNA.
Protein, Nucleic Acid and Enzyme,
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Strain(s): 2170 |
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Iwamura, T., Hase, E., Moriyama, Y., Tamiya, H.
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Life cycle of the green alga Chlorella with special reference to the protein and nucleic acids contents of cells in successive formative stages.
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Strain(s): 2170 |
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Iwamura, T., Kanazawa, T., Kanazawa, K.
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Nucleotide metabolism in Chlorella. I. Chromatographic analysis of the acid-soluble nucleotides.
Plant Cell Physiol.,
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Strain(s): 2170 |
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Iwamura, T., Kanazawa, T., Kanazawa, K.
1963
Nucleotide metabolism in Chlorella. II. Quantitative changes in component-nucleotides of the acid-soluble fraction of algal cells during their life-cycle.
Plant Cell Physiol.,
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587-596.
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Iwamura, T., Katoh, K., Nishimura, T.
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Semi-conservative replication of chloroplast DNA in synchronized Chlorella.
Cell Struct. Funct.,
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Iwamura, T., Kunieda, R. Kuwashima, S., Nishimura, T.
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Inhibition of growth of Chlorella by various drugs.
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Iwamura, T., Kuwashima, S.
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Formation of adenosine 5-triphosphate from polyphosphate by a cell-free extract from Chlorella.
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Iwamura, T., Kuwashima, S.
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Further observations on the deoxyribonucleic acid species in Chlorella showing light-dependent metabolic turnover.
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Iwamura, T., Kuwashima, S.
1969
Two DNA species in chloroplasts of Chlorella.
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Iwamura, T., Muto, N.
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Incorporation of 5-bromouracil into the two kinds of DNA in Chlorella.
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Iwamura, T., Myers, J.
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Changes in the content and distribution of the nucleic acid bases in Chlorella during the life cycle.
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Iwamura, T., Nagai, H., Ichimura, S.
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Improved methods for determining contents of chlorophyll, protein, ribonucleic acid, and deoxyribonucleic acid in planktonic populations.
Int. Revue Ges. Hydrobiol.,
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Iwamura, T., Takeda, Y., Nishimura, T.
1990
A c-myc like DNA fragment in Chlorella.
J. Nat. Sci. Nagoya Economics Univ., Ichimura Gakuen Junior Coll.,
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Magneto-optical properties of biogenic photonic crystals in algae.
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Iwasaka, M., Mizukawa, Y.
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Effect of intense magnetic fields on the convection of biogenic guanine crystals in aqueous solution.
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Studies on the red tide dinoflagellates - II. On Heterosigma inlandica appeared in Gokasho Bay, Shima Peninsula.
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Iwase, S., Abe, T.
2010
Identification and change in concentration of musty-odor compounds during frowth in blue-green algae.
J. Sch. Marine Sci. Tech., Tokai Univ.,
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Iwata, H., Haji, A., Hashimoto, K., Mitsuyanagi, K., Kanegae, Y.
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Methods for producing heat-unsoluble β-1,3-glucan [Kanetsu gyôkosei β-1,3-glucan no seizôhô].
In Nippon-koku Tokkyo-chô (JP), Kôkai Tokkyo Kôhô (A), Hei3-163102,
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Iwataki, M., Botes, L., Sawaguchi, T., Sekiguchi, K., Fukuyo, Y.
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Cellular and body scale structure of Heterocapsa ovata sp. nov. and Heterocapsa orientalis sp. nov. (Peridiniales, Dinophyceae).
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Iwataki, M., Hansen, G., Sawaguchi, T., Hiroishi, S., Fukuyo, Y.
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Investigations of body scales in twelve Heterocapsa species (Peridiniales, Dinophyceae), including a new species H. pseudotriquetra sp. nov.
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Izumi, Y., Aikawa, S., Matsuda, F., Hasunuma, T., Kondo, A.
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Aqueous size-exclusion chromatographic method for the quantification of cyanobacterial native glycogen.
J. Chromatogr. B,
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Keywords: Size-exclusion chromatography; Native glycogen; Qantitative analysis; Polyhydroxy methacrylate; Microalgae; Arthrospira platensis Strain(s): 39 PubMed: 23727872 DOI: 10.1016/j.jchromb.2013.04.037 |
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Jang, M. H., Ha, K., Lucas, M. C., Joo, G. J., Takamura, N.
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Changes in microcystin production by Microcystis aeruginosa exposed to phytoplanktivorous and omnivorous fish.
Aquat. Toxicol.,
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Keywords: Microcystis aeruginosa; microcystin; fish-induced defence; chemical cues; Hypophthalmichthys molitrix; Carassius gibelio langsdorfi Strain(s): 44, 88, 99 PubMed: 15110469 DOI: 10.1016/j.aquatox.2004.02.002 |
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Jang, M.-H., Ha, K., Jung, J.-M., Lee, Y.-J., Takamura, N.
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Increased microcystin production of Microcystis aeruginosa by indirect exposure of nontoxic cyanobacteria: potential role in the development Microcystis bloom.
Bull. Environ. Contam. Toxicol.,
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Jang, M.-H., Ha, K., Takamura, N.
2007
Reciprocal allelopathic responses between toxic cyanobacteria (Microcystis aeruginosa) and duckweed (Lemna japonica).
Toxicon,
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Keywords: Microcystis aeruginosa Kützing; Lemna japonica Landolg; microcystin; allelochemicals; reciprocal allelopathic responses; growth; eutrophic waters Strain(s): 103, 107 PubMed: 17207510 DOI: 10.1016/j.toxicon.2006.11.017 |
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Jang, M.-H., Ha, K., Takamura, N.
2008
Microcystin production by Microcystis aeruginosa exposed to different stages of herbivorous zooplankton.
Toxicon,
51,
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Keywords: Microcystis aeruginosa; induced defense; different stages of zooplankton; infochemicals; intracellular microcystin; extracellular microcystin Strain(s): 88, 98, 103, 107 PubMed: 18243271 DOI: 10.1016/j.toxicon.2007.12.015 |
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Jang, M.-H., Jung, J.-M., Takamura, N.
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Changes in microcystin production in cyanobacteria exposed to zooplankton at different population densities and infochemical concentrations.
Limnol. Oceanogr.,
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Jang, M-H., Ha, K., Joo, G-J., Takamura, N.
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Toxin production of cyanobacteria is increased by exposure to zooplankton.
Freshw. Biol.,
48,
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Keywords: info-chemicals; microcystin production; Microcystis aeruginosa; zooplankton; zooplankton culture media filtrate Strain(s): 44, 87, 88, 99 DOI: 10.1046/j.1365-2427.2003.01107.x |
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Jangir, M. M., Vani, B., Chowdhury, S.
2018
Analysis of seven putative Na+/H+ antiporters of Arthrospira platensis NIES-39 using transcription profiling and In-silico studies: an indication towards alkaline pH acclimation.
bioRXiv
Keywords: Arthrospira platensis NIES-39; Na+/H+ antiporters; pH; Real-time PCR; CPA family Strain(s): 39 DOI: 10.1101/344416 |
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Janouskovec, J., Horák, A., Oborník, M., Lukes, J., Keeling, P. J.
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A common red algal origin of the apicomplexan, dinoflagellate, and heterokont plastids.
Proc. Natl. Acad. Sci. U. S. A.,
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Keywords: Apicomplexa: Chromera velia: CCMP3155: plastid evolution: chloroplast genome Strain(s): 4391 PubMed: 20534454 DOI: 10.1073/pnas.1003335107 |
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Jiang, J., Lu, Y.
2019
Metabolite profiling of Breviolum minutum in response to acidification.
Aquat. Toxicol.,
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Parallel re-modeling of EF-1α function: divergent EF-1α genes co-occur with EFL genes in diverse distantly related eukaryotes.
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Mitochondrial group II introns in the Raphidophycean flagellate Chattonella spp. suggest a diatom-to-Chattonella lateral group II intron transfer.
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Keywords: Chattonella; cytochrome c oxidase subunit 1 (cox1); diatoms; group II intron; lateral transfer; Raphidophyceae Strain(s): 1, 2, 3, 14, 85, 86, 115, 118, 121, 161, 462, 557, 558, 603, 671, 716, 849, 1303, 1975, 1976, 2391, 2401, 2402, 2403, 2404 PubMed: 19346162 DOI: 10.1016/j.protis.2009.02.003 |
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Fish. Sci.,
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Keywords: Chattonella sp.; cytochrome c oxidase subunit 1 (cox1); cytochrome c oxidase subunit 2 (cox2); genetic diversity; harmful algae; mitochondria Strain(s): 1, 2, 3, 14, 85, 86, 115, 118, 121, 161, 557, 558, 603, 671, 849 DOI: 10.1111/j.1444-2906.2007.01408.x |
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Expanded phylogenies of canonical and non-canonical types of methionine adenosyltransferase reveal a complex history of these gene families in eukaryotes.
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Kamikawa, R., Tanifuji, Ishikawa, G. S., Ishii, K., Matsuno, Y., Onodera, N. T., Ishida, K-I., Hashimoto, T., Miyashita, H., Mayama, S., Inagaki, Y.
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Proposal of a Twin-arginine translocator system-mediated constraint against loss of ATP synthase genes from nonphotosynthetic plastid genomes.
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Cercozoa comprises both EF-1α-containing and EFL-containing members.
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Effects of blue light and ammonia on nitrogen metabolism in a colorless mutant of Chlorella.
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Keywords: MWI fly ash; leachate; algal assay; Daphnia test; hazardous waste Strain(s): 35 |
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Kaneko, T., Nakajima, N., Okamoto, S., Suzuki, I., Tanabe, Y., Tamaoki, M., Nakamura, Y., Kasai, F., Watanabe, A., Kawashima, K., Kishida, Y., Ono, A., Shimizu, Y., Takahashi, C., Minami, C., Fujishiro, T., Kohara, M., Katoh, M., Nakazaki, N., Nakayama, S., Yamada, M., Tabata, S., Watanabe, M. M.
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Isolation and molecular identification of some blue-green algae (cyanobacteria) from freshwater sites in Tokat province of Turkey.
Turkish JAF Sci.Tech.,
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Karlsson, K.
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Liquid chromatotraphy - mass spectrometry in distribution and bioaccumulation studies of toxic cyanopeptides.
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The interactive effects of UV-B radiation and a herbicide on uptake and allocation of carbon in two strains of the green alga Scenedesmus.
Aquat. Ecol.,
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Keywords: herbicide tolerance; photosynthesis; phytoplankton; simetryn; triazine herbicides; ultraviolet radiation Strain(s): 802 DOI: 10.1007/BF02493513 |
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Genetic changes in phytoplankton communities exposed to the herbicide simetryn in outdoor experimental ponds.
Arch. Environ. Contam. Toxicol.,
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Strain(s): 797, 798, 799, 800, 801, 802 DOI: 10.1007/BF00217610 |
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Kasai, F., Hatakeyama, S.
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Chemosphere,
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Kasai, F., Hatakeyama, S.
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Changes in herbicide susceptibility of algae in a river running through an agricultural region.
Ecol. Chem. (St.Petersburg),
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Keywords: algal community; herbicide; simetryn; pretilachlor; pollution; effects Strain(s): 803, 804, 805 |
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Morphological variabilities of three closely related mating groups of Closterium ehrenbergii Meneghini (Chlorophyta).
J. Phycol.,
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Keywords: cell shape and size; clonal culture; Closterium ehrenbergii; mating group; morphological variability; statistical analysis Strain(s): 171, 228, 229 DOI: 10.1111/j.1529-8817.1986.tb04159.x |
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Kasai, F., Ichimura, T.
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Temperature optima of three closely related mating groups of the Closterium ehrenbergii (Chlorophyta) species complex.
Phycologia,
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Strain(s): 228, 229 DOI: 10.2216/i0031-8884-29-4-396.1 |
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Environ. Pollut.,
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Immunological cross-reactivity among corresponding proteins of photosystems I and II from widely divergent photosynthetic organisms.
Plant Cell Physiol.,
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Keywords: antiserum; cross-reactivity; immunoblotting; photosystem; protein Strain(s): 2093, 2138, 2235 DOI: 10.1093/oxfordjournals.pcp.a077935 |
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Kashiyama Y., Yokoyama A., Kinoshita Y., Shoji S., Miyashiya H., Shiratori T., Suga H., Ishikawa K., Ishikawa A., Inouye I., Ishida K., Fujinuma D., Aoki K., Kobayashi M., Nomoto S., Mizoguchi T., Tamiaki H.
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Ubiquity and quantitative significance of detoxification catabolism of chlorophyll associated with protistan herbivory.
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Quantitative analysis of tip growth, phototropic responses, and other blue light-dependent photoresponses of Vaucheria.
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Keywords: Apical expansion; Aureochrome; Blue light; Branching; Ca2+ ion; Coenocyte; Lightgrowth response; Negative phototropism; Polarotropism; Positive phototropism; Split-field illumination method; Unilateral illumination method; Vaucheria Strain(s): 2614, 2615 PubMed: 30694469 DOI: 10.1007/978-1-4939-9015-3_8 |
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PCR primers for selective detection of intra-species variations in the bloom-forming cyanobacterium, Microcystis.
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Recent introduction of a freshwater red alga Chantransia macrospora (Batrachospermales, Rhodophyta) to Okinawa, Japan.
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Mating type interaction in Closterium peracerosum-strigosum-littorale: mating induced protoplast release.
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Rediscovery of the wild-extinct species Nitellopsis obtusa (Charales) in Lake Kawaguchi, Japan.
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Keywords: Charales; Nitellopsis; rbcL gene; rediscovery; wild-extinct species Strain(s): 1638 |
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Morphological variation and intraspecific phylogeny of the ubiquitous species Chara braunii (Charales, Charophyceae) in Japan.
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Keywords: aquatic habitat; Chara braunii; Charales; Charophyceae; intergenic spacer region; intraspecific phylogeny; morphological variation, rbcL gene Strain(s): 1586, 1587, 1588, 1589, 1590, 1591, 1593, 1604 DOI: 10.2216/07-27.1 |
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Keywords: cyanophytes/cyanobacteria; Microcystis; allozyme divergence; allozyme genotype; allozyme study; cell size; molecular taxonomy Strain(s): 1055, 1058, 1061, 1063, 1064, 1067, 1068, 1070, 1071, 1074, 1077, 1079, 1081, 1084, 1086, 1090, 1091, 1093, 1095, 1097, 1098 |
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Effect of calcium ion on uptake of amino acids by symbiotic Chlorella F36-ZK isolated from Japanese Paramecium bursaria.
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Keywords: Paramecium bursaria; Chlorella; Calcium; Divalent cation; Amino acid transport; Symbiosis Strain(s): 227, 2157, 2540 DOI: 10.1016/j.plantsci.2007.10.001 |
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Studies on the nitrogen utilization of endosymbiotic algae isolated from Japanese Paramecium bursaria.
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Keywords: Endosymbiont; Paramecium bursaria; Nitrogen utilization; Chlorella Strain(s): 227, 2540, 2541 DOI: 10.1016/j.plantsci.2005.09.018 |
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Phylogenetic analysis of NAP, an unconventional actin of the Volvocales.
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Keywords: Volvocales; Divergent actin Strain(s): 351, 546, 576, 717, 3374 DOI: 10.1007/s00606-014-1187-5 |
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Astaxanthin production by Haematococcus pluvialis under illumination with LEDs.
Enzyme Microb. Technol.,
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Keywords: astaxanthin; light emitting diode; wavelength; accumulation of astaxanthin Strain(s): 144 DOI: 10.1016/j.enzmictec.2004.03.016 |
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Effect of flashing light from blue light emitting diodes on cell growth and astaxanthin production of Haematococcus pluvialis.
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Effect of light intensity and frequency of flashing light from blue light emitting diodes on astaxanthin production by Haematococcus pluvialis.
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Validation of rapid algal bioassay using delayed fluorescence in an interlaboratory ring study.
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Rapid ecotoxicological bioassay using delayed fluorescence in the green alga Pseudokirchneriella subcapitata.
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Application of cryopreservation to genetic analyses of a photosynthetic picoeukaryote community.
Gene,
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Two different rickettsial bacteria invading Volvox carteri.
PLoS One,
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Kawafune, K., Hongoh, Y., Hamaji, T., Nozaki, H.
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Molecular identification of rickettsial endosymbionts in the non-phagotrophic Volvocalean green algae.
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Ultrastructure of the rickettsial endosymbiont "MIDORIKO" in the green alga Carteria cerasiformis as revealed by high-pressure freezing and freeze-substitution fixation.
Protoplasma,
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Potential of a green alga Botryococcus braunii for simultaneous water purification and biofuel production under open-air condition.
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Keywords: biofuel production; Botryococcus braunii; Microcystis aeruginosa; water purification Strain(s): 87, 836, 1090 |
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Changes in alkaline band formation and calcification of corticated charophyte Chara globularis.
SpringerPlus,
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Schizocladia ischiensis: a new filamentous marine chromophyte belonging to a new class, Schizocladiophyceae.
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Determining the optimal cultivation strategy for microalgae for biodiesel production using flow cytometric monitoring and mathematical modeling.
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Keywords: Biofuel; Logistic equation; Optimal cultivation; Simulation model; Triacylglycerols Strain(s): 2168 DOI: 10.1016/j.biombioe.2018.07.005 |
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Coelastrella astaxanthina sp. nov. (Sphaeropleales, Chlorophyceae), a novel microalga isolated from an asphalt surface in midsummer in Japan.
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A photodetoxifi-cation mechanism of the cyanobacterial hepatotoxin microcystin-LR by ultraviolet irradiation.
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A novel retinoic acid analogue, 7-hydroxy retinoic acid, isolated from cyanobacteria.
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Microcystin composition of an axenic clonal strain of Microcystis viridis and Microcystis viridis-containing waterblooms in Japanese freshwaters.
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Effect of coccolith polysaccharides isolated from the coccolithophorid, Emiliania huxleyi, on calcite crystal formation in in vitro CaCO3 crystallization.
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Isolation and characterization of Noctiluca-killing bacteria from a shrimp aquaculture pond in Thailand.
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Comparative physiology and biochemistry and taxonomic assignment of the Chlorella (Chlorophyceae) strains of the Culture Collection of the University of Texas at Austin.
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Diuron causes sinking retardation and physiochemical alteration in marine diatoms Thalassiosira pseudonana and Skeletonema marinoi-dohrnii complex.
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Nuclear rDNA and chloroplast rbcL, rbcS and IGS sequence data, and their implications from the Japanese, Korean, and North American harmful algae, Heterosigma akashiwo (Raphidophyceae).
Environ. Res.,
103,
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Keywords: Heterosigma akashiwo; blooms; nuclear rDNA; rbcS; IGS Strain(s): 293 DOI: 10.1016/j.envres.2006.08.014 |
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Ki, J.-S., Han, M.-S.
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Rapid molecular identification of the harmful freshwater dinoflagellate Peridinium in various life stages using genus-specific single-cell PCR.
J. Appl. Phycol.,
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Keywords: dinoflagellate cyst; planozygote; rDNA Strain(s): 495 DOI: 10.1007/s10811-007-9157-8 |
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Kim, B.-H., Oh, H.-M., Lee, Y.-K., Choi, G.-G., Ahn, C.-y., Yoon, B.-D., Kim, H.-S.,
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Simple method for RNA preparation from cyanobacteria.
J. Phycol.,
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Keywords: bead–phenol–chloroform method; cyanobacteria; RNA extraction; xanthogenate–SDS–phenol method Strain(s): 33, 39, 230 DOI: 10.1111/j.1529-8817.2006.00263.x |
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Kim, B.-H., Ramanan, R., Cho, D.-H., Choi, G.-G., La, H.-J., Ahn, C.-Y., Oh, H.-M., Kim, H.-S.
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Simple, rapid and cost-effective method for high quality nucleic acids extraction from different strains of Botryococcus braunii.
PLoS One,
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Kim, B.-H., Ramanan, R., Kang, Z., Cho, D.-H., Oh, H.-M., Kim, H.-S.
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Chlorella sorokiniana HS1, a novel freshwater green algal strain, grows and hyperaccumulates lipid droplets in seawater salinity.
Biomass Bioenerg.,
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Keywords: Chlorella; Salt stress; Green algae; Lipid droplets; Biodiesel; Commercialization Strain(s): 2150 DOI: 10.1016/j.biombioe.2015.12.026 |
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Kim, C.-J., Hung, Y.-H., Oh, H.-M,
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Factors indicating culture status during cultivation of Spirulina (Arthrospira) platensis.
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Keywords: coil number; culture status; syanobacteria; floating activity; Spirulona platensis Strain(s): 39, 46 PubMed: 17483796 |
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Adsorption of turbid materials by the cyanobacterium Phormidium parchydematicum.
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Keywords: Chlorella vulgaris; Clay; Cyanobacteria; Phormidium parchydematicum; Turbid material Strain(s): 39 DOI: 10.1007/s10811-009-9440-y |
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Kim, D., Nakamura, A., Okamoto, T., Komatsu, N., Oda, T., Ishimatsu, A., Muramatsu, T.
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Toxic potential of the raphidophyte Olisthodiscus luteus: mediation by reactive oxygen species.
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Kim, D., Oda, T., Ishimatsu, A., Muramatsu, T.
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Galacturonic-acid-induced increase of superoxide production in red tide phytoplankton Chattonella marina and Heterosigma akashiwo.
Biosci. Biotechnol. Biochem.,
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Keywords: red tide plankton; Chattonella marina; Heterosigma akashiwo; galacturonic acid; reactive oxygen species Strain(s): 6 PubMed: 10830520 DOI: 10.1271/bbb.64.911 |
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Kim, D., Okamoto, T., Oda, T., Tachibana, K., Lee, K. S., Ishimatsu, A., Matsuyama, Y., Honjo, T., Muramatsu, T.
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Possible involvement of the glycocalyx in the ichthyotoxicity of Chattonella marina (Raphidophyceae): immunological approach using antiserum against cell surface structures of the flagellate.
Mar. Biol.,
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Strain(s): 6, 15 DOI: 10.1007/s002270100614 |
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Kim, D., Sato, Y., Oda, T., Muramatsu, T., Matsuyama, Y., Honjo, T.
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Specific toxic effect of dinoflagellate Heterocapsa circularisquama on the rotifer Brachionus plicatilis.
Biosci. Biotechnol. Biochem.,
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Keywords: red tide; Heterocapsa circularisquama; rotifer; toxicity; dinoflagellate Strain(s): 6 PubMed: 11210146 DOI: 10.1271/bbb.64.2719 |
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Kim, D., Waranabe, M., Nakayasu, Y., Kohata, K.
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Production of superoxide anion and hydrogen peroxide associated with cell growth of Chattonella antiqua.
Aquat. Microb. Ecol.,
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Keywords: Cell cycles; Chattonella antiqua; Hydrogen peroxide; NIES culture tank; Reactive oxygen species; Red tide; Superoxide anion Strain(s): 1 DOI: 10.3354/ame035057 |
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Kim, D., Waranabe, M., Nakayasu, Y., Kohata, K.
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Changes in O2- and H2O2 production by Chattonella antiqua during diel vertical migration under nutrient stratification.
Aquat. Microb. Ecol.,
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Keywords: Chattonella antiqua; Diel vertical migration; Hydrogen peroxide; Nutrient stratification; Reactive oxygen species; Superoxide anion Strain(s): 1 DOI: 10.3354/ame039183 |
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Kim, E., Graham, L. E.
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EEF2 analysis challenges the monophyly of Archaeplastida and Chromalveolata.
PLoS One,
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Strain(s): 1335 PubMed: 18612431 DOI: 10.1371/journal.pone.0002621 |
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Kim, E., Simpson, A. G., Graham, L. E.
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Evolutionary relationships of apusomonads inferred from taxon-rich analyses of nuclear encoded genes.
Mol. Biol. Evol.,
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Keywords: Apusomonas; Apusomonadidae; Opisthokonta; Amoebozoa; protists; evolution Strain(s): 936, 955, 1333, 1335 PubMed: 16982820 DOI: 10.1093/molbev/msl120 |
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Kim, E., Wilcox, L. W., Fawley, M. W., Graham, L. E.
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Phylogenetic position of the green flagellate Mesostigma viride based on alpha-tubulin and beta-tubulin gene sequences.
Int. J. Plant Sci.,
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Keywords: Mesostigma; Coleochaete; Pterosperma; Nephroselmis; Mantoniella; Streptophyta; Viridiplantae; α-tubulin; β-tubulin Strain(s): 955 DOI: 10.1086/504391 |
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Kim, J. I., Shin, W., Treimer, R. E.
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Multigene analyses of photosynthetic euglenoids and new family, Phacaceae (Euglenales).
J. Phycol.,
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Keywords: discoid chloroplast; Euglenaceae; Euglenales; multigene analysis; Phacaceae; phylogeny; synapomorphy Strain(s): 381 DOI: 10.1111/j.1529-8817.2010.00910.x |
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Kim, M., Shin, B., Lee, J., Park, H. Y., Park, W.
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Culture-independent and culture-dependent analyses of the bacterial community in the phycosphere of cyanobloom-forming Microcystis aeruginosa.
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A close relationship between algicidal bacteria and termination of Heterosigma akashiwo (Raphidophyceae) blooms in Hiroshima Bay, Japan.
Mar. Ecol. Prog. Ser.,
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Keywords: algicidal bacteria; marine bacteria; marine phytoplankton; red tide; bloom; Raphidophyceae; Heterosigma akashiwo Strain(s): 1 DOI: 10.3354/meps170025 |
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Kim, T. Y., Hong, J. E., Park, H. M., Lee, U. J., Lee, S-Y.
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Decontamination of low-level contaminated water from radioactive cesium and cobalt using microalgae.
J. Radioanal. Nucl. Chem.,
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Keywords: Radionuclide; Microalgae; Cobalt; Cesium; Decontamination; Biosorption Strain(s): 2860 DOI: 10.1007/s10967-019-07008-4 |
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Chloroplast small-subunit ribosomal RNA gene sequence from Chlamydomonas parkeae (Chlorophyta) : molecular phylogeny of a green alga with a peculiar pigment composition.
Eur. J. Phycol.,
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Keywords: Chlamydomonas parkeae; Chlorophyta; chloroplast small-subunit (SSU) rRNA; phylogeny; pigment composition Strain(s): 228, 254, 440, 468, 666 DOI: 10.1080/09670269400650661 |
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Carbonic anhydrase in Chlamydomonas reinhardtii I. Localization.
Plant Cell Physiol.,
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Keywords: carbonic anhydrase; cell wall-less mutant; Chyamydomonas reinhardtii; periplasm; wall lysing enzyme Strain(s): 2237, 2238 DOI: 10.1093/pcp/24.2.255 |
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Possible phago-trophic feeding of bacteria in a freshwater red tide Chrysophyceae Uroglena americana.
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Keywords: Microcystis; Chlorella; Nitzschia; growth inhibition; allelopathy Strain(s): 88, 487, 642 |
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Kimura, K., Tomaru, Y.
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Isolation and characterization of a single-stranded DNA virus infecting the marine planktonic diatom Chaetoceros sp. strain SS628-11 isolated from western Japan.
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Kimura, K., Tomaru, Y.
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Effects of temperature and salinity on diatom cell lysis by DNA and RNA viruses.
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Nutrient removal from anaerobic digestion effluents of aquatic macrophytes with the green alga, Chlorella sorokiniana.
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Evoluation of a cyanobacterium, Nostoc sp. HK-01, as food material for space agriculture on Mars.
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Keywords: Cyanobacteria; Food; Martian regolith simulant (MRS); Nostoc sp. HK-01; Radicalscavenging activity; Space Agriculture Strain(s): 2109, 2114 DOI: 10.2187/bss.29.24 |
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Complete life cycle and heat tolerance of dry colonies of a terrestrial cyanobacterium, Nostoc sp. HK-01.
Biological Sciences in Space,
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Keywords: compatible solute; cyanobacteria; extracellular polysaccharides; heat tolerance; life cycle of cell; Nostoc sp. HK-01 Strain(s): 2109 DOI: 10.2187/bss.31.1 |
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The ultrastructure of contractile tubules in the heliozoan Actinophrys sol and their possible involvement in rapid axopodial contraction.
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Keywords: Axopodium; Ca2+-contraction; colchicine; electron microscopy Strain(s): 2497 PubMed: 11596916 DOI: 10.1111/j.1550-7408.2001.tb00187.x |
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Ultrastructure and rapid axopodial contraction of a heliozoan, Raphidiophyrys contractilis sp. nov.
J. Eucaryot. Microbiol.,
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Keywords: Contraction; Heliozoa; microtubule pattern; new species; Raphidiophyrys; silicic scale; X-ray microanalysis Strain(s): 2498, 3374 DOI: 10.1111/j.1550-7408.1995.tb01581.x |
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A possibility of control and prevention of excessive phytoplankton growth by photochromism.
J. Jpn. Soc. Wat. Environ.,
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Keywords: photochromism; spironaphthoxazine; shielding sunlight; algal growth potential; eutrophication Strain(s): 98 |
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Biofilm cultivation of Haematococcus pluvialis enables a highly productive one-phase process for astaxanthin production using high light intensities.
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Keywords: Microalgae; Immobilized cultivation; Irradiation; Carbon dioxide; Twin-Layer; Carotenoid Strain(s): 144 DOI: 10.1016/j.algal.2016.10.025 |
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Heterotrophic utilization of ethylene glycol and propylene glycol by Chlorella protothecoides.
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Carbon fixation properties of three alkalihalophilic microalgal strains under high alkalinity.
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Carbon mass balance in Arthrospira platensis culture with medium recycle and high CO2 supply.
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Micropeptins from the freshwater cyanobacterium Microcystis aeruginosa (NIES-100).
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Studies on the growth control of toxic cyanobacteria by use of the water-extracts from the dead leaves of deciduous trees.
Environ. Eng. Res. [Kankyô-kôgaku Kenkyû Ronbunshû],
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Keywords: growth control; Microcystis aeruginosa; dead-leaves; deciduous trees; condensed tannin Strain(s): 102 |
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Kiyohara, T., Fujita, Y., Hattori, A., Watanabe, A.
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Effect of light on glucose assimilation in Tolypothrix tenuis.
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Structural and functional diversity of caspase homologues in non-metazoan organisms.
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Specimen preparation for cryogenic coherent X-ray diffraction imaging of biological cells and cellular organelles by using the X-ray free-electron laser at SACLA.
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Radiative transfer model for satellite remote sensing of ocean colors in coastal zones.
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In vivo antioxidant role of astaxanthin under oxidative stress in the green alga Haematococcus pluvialis.
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Abscisic acid-dependent algal morphogenesis in the unicellular green alga Haematococcus pluvialis.
Plant Growth Regulation,
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Keywords: abscisic acid; active oxygen; carotenoid; cyst formation; drought stress; Haematococcus pluvialis Strain(s): 144 DOI: 10.1023/A:1005862809711 |
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Kobayashi, M., Kakizono, T., Nagai, S.
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Astaxanthin production by a green alga, Haematococcus pluvialis accompanied with morphological changes in acetate media.
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Enhanced carotenoid biosynthesis by oxidative stress in acetate-induced cyst cells of a green unicellular alga, Haematococcus pluvialis.
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Photo-dependent astaxanthin biosynthesis in a green alga, Haematococcus pluvialis.
Seibutsu-Kôgaku,
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Strain(s): 144 |
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Kobayashi, M., Kakizono, T., Nishio, N., Nagai, S.
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Effects of light intensity, light quality, and illumination cycle on astaxanthin formation in a green alga, Haematococcus pluvialis.
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Antioxidant role of astaxanthin in the green alga Haematococcus pluvialis.
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Kobayashi, M., Kakizono, T., Yamaguchi, K., Nishio, N., Nagai, S.
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Growth and asta-xanthin formation of Haematococcus pluvialis in heterotrophic and mixotrophic conditions.
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Morphological changes in the life cycle of the green alga Haematococcus pluvialis.
J. Ferment. Bioeng.,
84,
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Keywords: astaxanthin; encystment; germination; Haematococcus pluvialis; life cycle; maturation Strain(s): 144 DOI: 10.1016/S0922-338X(97)82794-8 |
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Kobayashi, M., Kurimura, Y., Sakamoto, Y., Tsuji, Y.
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Selective extraction of astaxanthin and chlorophyll from the green alga Haematococcus pluvialis.
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Kobayashi, M., Kurimura, Y., Tsuji, Y.
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Light-independent, astaxanthin production by the green microalga Haematococcus pluvialis under salt stress.
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Protective role of astaxanthin against u.v.-B irradiation in the green alga Haematococcus pluvialis.
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Kobayashi, M., Todoroki, Y., Hirai, N., Kurimura, Y., Ohigashi, H., Tsuji, Y.
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Biological activities of abscisic acid analogs in the morphological change of the green alga Haematococcus pluvialis.
J. Ferment. Bioeng.,
85,
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Keywords: abscisic acid; astaxanthin; carotenogenesis; drought stress; encystment; plant hormone; Haematococcus pluvialis Strain(s): 144 DOI: 10.1016/S0922-338X(98)80076-7 |
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Kobayashi, T. Takahara, M., Miyagishima, S, Kuroiwa, H., Sasaki, N., Ohta, N., Kuroiwa, T.
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Detection and localization of a chloroplast-encoded HU-like protein that may organize chloroplast nucleoids.
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Tetrapyrole signal as a cell cycle coordinator from organelle to nuclear DNA replication in plant cells.
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Eukaryotic components remodeled chloroplast nucleoid organization during the green plant evolution.
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Aeruginosin 103-A, a thrombin inhibitor from the cyanobactrium Microcystis viridis.
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Dehydroradiosumin, a trypsin inhibitor from the cyanobacterium Anabaena cylindrica.
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Biochemical characterization of allene oxide synthases from the liverwort Marchantia polymorpha and green microalgae Klebsormidium flaccidum provides insight into the evolutionary divergence of the plant CYP74 family.
Planta,
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The use of a controlled experimental ecosystem (Microcosm) in studies of mechanism of red tide outbreaks (II) - Growth of Heterosigma akashiwo, red tide flagellate, in Microcosm.
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Keywords: cell division; culture tank; DCMU-induced fluorescence; Heterosigma akashiwo; vertical migration Strain(s): 6 DOI: 10.1016/0022-0981(86)90163-2 |
|
Kohata, K., Watanabe, M.
1987
The use of a controlled experimental ecosystem (Microcosm) in studies of mechanism of red tide outbreaks (V) - Growth and cell volume change of Heterosigma akashiwo, a red tide flagellate.
Res. Rep. Natl. Inst. Environ. Stud.,
No. 110,
57-66 (in Japanese with English summary).
Strain(s): 6 |
|
Kohata, K., Watanabe, M.
1987
The use of a controlled experimental ecosystem (Microcosm) in studies of mechanism of red tide outbreaks (VI) - Diurnal changes of C/N ratio and distribution of chloroplast pigments in the culture of Chattonella antiqua, a red tide flagellate.
Res. Rep. Natl. Inst. Environ. Stud.,
No. 110,
67-77 (in Japanese with English summary).
Strain(s): 1 |
|
Kohata, K., Watanabe, M.
1987
The use of a controlled experimental ecosystem (Microcosm) in studies of mechanism of red tide outbreaks (VII) - Growth and its mathematical model of Heterosigma akashiwo, a red tide flagellate, in light-limited synchronous cultures.
Res. Rep. Natl. Inst. Environ. Stud.,
No. 110,
79-88 (in Japanese with English summary).
Strain(s): 6 |
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Kohata, K., Watanabe, M.
1988
Diel changes in the composition of photosynthetic pigments and cellular carbon and nitrogen in Chattonella antiqua (Raphidophyceae).
J. Phycol.,
24,
58-66.
Keywords: carotenoids; cellular carbon; Chattonella antiqua; chlorophyll; diel change; laboratory culture tank; light-dark cycles Strain(s): 1 DOI: 10.1111/j.1529-8817.1988.tb04456.x |
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Kohata, K., Watanabe, M.
1989
Diel changes in the composition of photosynthetic pigments and cellular carbon and nitrogen in Pyramimonas parkeae (Prasinophyceae).
J. Phycol.,
25,
377-385.
Keywords: carotenoids; cellurar carbon; chlorophyll; diel change; laboratory culture tank; light-dark cycles; loroxanthin dodecenoate; Pyremimonas parkeae Strain(s): 254 DOI: 10.1111/j.1529-8817.1989.tb00134.x |
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Kohata, K., Watanabe, M. M., Nakamura, Y., Watanabe, M.
1982
Growth and phosphate uptake kinetics in Olisthodiscus luteus: grown on synchronized batch cultures.
Res. Rep. Natl. Inst. Environ. Stud.,
No. 30,
95-111 (in Japanese with English summary).
Strain(s): 6 |
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Kohata, K., Watanabe, M., Yamanaka, K.
1991
Highly sensitive determination of photosynthetic pigments in marine in situ samples by high-performance liquid chromatography.
J. Chromatogr. A
558,
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Strain(s): 6, 7, 254, 323, 353 |
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Koike, H., Shibata, M., Yasutomi, K., Kashino, Y., Satoh, K.
2000
Identification of photosystem I components from a glaucocystophyte, Cyanophora paradoxa: The PsaD protein has an N-terminal stretch homologous to higher plants.
Photosynth. Res.,
65,
207-217.
Keywords: Cyanophora paradoxa; glaucocystophyte; light harvesting complex; photosystem I; PsaD; PsaL Strain(s): 547 DOI: 10.1023/A:1010734912776 |
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Kojima, E., Yamaguchi, Y.
1988
Photoproduction of hydrogen by adapted cells of Chlorella pyrenoidosa.
J. Ferment. Technol.,
66,
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Strain(s): 685 DOI: 10.1016/0385-6380(88)90124-0 |
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Unique chlorophylls in picoplankton Prochlorococcus sp. “Physicochemical properties of divinyl chlorophylls, and the discovery of monovinyl chlorophyll b as well as divinyl chlorophyll b in the species Prochlorococcus NIES-2086.”
Photosynth. Res.,
130,
445-467.
Keywords: Chlorophyll; Divinyl chlorophyll; Pheophytin; Photosynthesis; Prochlorococcus Strain(s): 2086, 2087, 2884, 3376 PubMed: 27334004 DOI: 10.1007/s11120-016-0283-5 |
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Komor, E., Cho, B.-H., Kraus, M.
1988
The occurrence of the glucose-inducible transport systems for glucose, proline, and arginine in different species of Chlorella.
Botanica Acta,
101,
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Keywords: Amino acid transport; induction by glucose; Chlorella; classification Strain(s): 687, 2150 DOI: 10.1111/j.1438-8677.1988.tb00051.x |
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Kondo, F., Ikai, Y., Oka, H., Ishikawa, N., Watanabe, M. F., Watanabe, M., Harada, K., Suzuki, M.
1992
Separation and identification of microcystins in cyanobacteria by frit-fast atom bombardment liquid chromatography / mass spectrometry.
Toxicon,
30,
227-237.
Strain(s): 1213 PubMed: 1529459 DOI: 10.1016/0041-0101(92)90865-3 |
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Kondo, R., Kagiya, G., Hiroishi, S., Watanabe, M.
2000
Genetic typing of a bloom-forming cyanobacterial genus Microcystis in Japan using 16S rRNA gene sequence analysis.
Plankton Biol. Ecol.,
47,
1-6.
Keywords: genetic typing; 16S rDNA; Microcystis; cyanobacteria; phylogenetic analysis Strain(s): 87, 88, 89, 90, 91, 98, 99, 100, 101, 102, 104, 105, 106, 108, 109, 110, 111, 112, 298, 299, 604, 1055, 1061, 1068, 1076, 1090, 1091, 1105, 1122, 1142, 1164 |
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1999
Rapid DNA extraction from a bloom-forming cyanobacterium.
Microbes Environ.,
14,
157-161.
Keywords: DNA extraction; PCR; Microcystis; cyanobacteria Strain(s): 87, 88, 89, 90, 91, 98, 99, 100, 101, 102, 104, 105, 106, 108, 109, 110, 111, 112, 298, 299, 604, 1055, 1061, 1068, 1076, 1090, 1091, 1105, 1122, 1142, 1164 DOI: 10.1264/jsme2.14.157 |
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Kondo, R., Kagiya, G., Komura, M., Yuki, Y., Hiroishi, S., Watanabe, M.
2000
Molecular taxonomy of a bloom-forming cyanobacterial genus Microcystis.
Bull. Plankton Soc. Japan,
47,
25-33 (in Japanese with English summary).
Keywords: cyanobacteria; Microcystis; bacterial criteria; molecular analysis Strain(s): 6, 87, 88, 89, 90, 91, 98, 99, 100, 101, 102, 104, 105, 106, 108, 109, 110, 111, 112, 298, 299, 604, 1055, 1061, 1068, 1076, 1090, 1091, 1105, 1122, 1142, 1164 |
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Kondo, R., Kagiya, G., Yuki, Y., Hiroishi, S., Watanabe, M.
1998
Taxonomy of a bloom-forming cyanobacterial genus Microcystis.
Nippon Suisan Gakkaishi,
64,
291-292 (in Japanese with English title).
Strain(s): 87, 88, 89, 90, 91, 98, 99, 100, 101, 102, 104, 105, 106, 107, 108, 109, 110, 111, 112, 298, 299, 604 |
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Kondo, R., Komura, M., Hiroishi, S., Hata, Y.
1998
Detection and 16S rDNA sequence analysis of a bloom-forming cyanobacterial genus Microcystis.
Fish. Sci.,
64,
840-841.
Keywords: Microcystis; 16S rDNA; PCR Strain(s): 107, 112 DOI: 10.2331/fishsci.64.840 |
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Growth and grazing kinetics of the facultative anaerobic nanoflagellate, Suigetsumonas clinomigrationis.
Microbes Environ.,
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Keywords: anaerobic flagellate; growth rate; ingestion rate; Lake Suigetsu Strain(s): 3647 PubMed: 28190796 DOI: 10.1264/jsme2.ME16113 |
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Kondo, R., Yoshida, T., Yuki, Y., Hiroishi, S.
2000
DNA-DNA reassociation among a bloom-forming cyanobacterial genus, Microcystis.
Int. J. Syst. Evol. Microbiol.,
50,
767-770.
Keywords: DNA hybridization; DNA G+C content; cyanobacteria; Microcystis Strain(s): 87, 89, 98, 102, 104, 111, 112, 298, 604 |
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Robust expression of heterologous genes by selection marker fusion system in improved Chlamydomonas strains.
Biotech. Bioeng.,
120,
239-245.
Keywords: Transgene silencing; Position effect; Squalene synthase-like gene; Botryococcus braunii; Methyltransferase gene Strain(s): 2235 PubMed: 25660568 DOI: 10.1016/j.jbiosc.2015.01.005 |
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1987
Effects of chemical substance on the growth of algae [Sôrui no zôsyoku ni oyobosu kagakubusshitsu no eikyô].
Tokyo-to Kankyô Kagaku Kenkyûjo Nenpô. 1987,
4 pp. (in Japanese without English title).
Strain(s): 35 |
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Kooistra, W. H. C. F., Sarno, D., Balzano, S., Gu, H., Andersen, R. A., Zingone, A.
2008
Global diversity and biogeography of Skeletonema species (Bacillariophyta).
Protist,
159,
177-193.
Keywords: biogeography; cryptic species; distribution; LSU rDNA; phytoplankton; Skeletonema costatum Strain(s): 16, 17, 223, 323, 324 PubMed: 18042429 DOI: 10.1016/j.protis.2007.09.004 |
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Quantitative real-time PCR detection of toxic Nodularia cyanobacteria in the Baltic Sea.
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73,
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Strain(s): 81, 89, 102 PubMed: 17277219 DOI: 10.1128/AEM.02746-06 |
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1989
Occurrence of protochlorophyll and its phototransformation to chlorophyll in mutant C-2A' of Scenedesmus obliquus.
Physiol. Plant.,
75,
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Keywords: green algae; phototransformation; protochlorophyllide; protochlorophyllide reductase; Scenedesmus obliquus Strain(s): 2280 DOI: 10.1111/j.1399-3054.1989.tb06172.x |
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The origin of photoactivated adenylyl cyclase (PAC), the Euglena blue-light receptor: phylogenetic analysis of orthologues of PAC subunits from several euglenoids and trypanosome-type adenylyl cyclases from Euglena gracilis.
Photochem. Photobiol. Sci.,
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SSU rRNA gene phylogeny of morphospecies affiliated to the bioassay alga "Selenastrum capricornutum" recovered the polyphyletic origin of crescent-shaped Chlorophyta.
J. Phycol.,
47,
880-893.
Keywords: Kirchneriella; Neocystis mucosa sp. nov..; Nephrochlamys; Raphidocelis; Rhombocystis; Selenastrum; SSU rRNA gene phylogeny; taxonomy; Tetranephris; ultrastructure Strain(s): 2708, 2709, 2710, 2711, 2712, 2713, 2714 PubMed: 27020023 DOI: 10.1111/j.1529-8817.2011.01010.x |
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Krupnik, T., Kotabová, E., van Bezouwen, L. S., Mazur, R., Garstka, M., Nixon, P. J., Barber, J., Kaňa, R., Boekema, E. J., Kargul, J.
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A reaction center-dependent photoprotection mechanism in a highly robust photosystem II from an extremophilic red alga, Cyanidioschyzon merolae.
J. Biol. Chem.,
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Strain(s): 1332 DOI: 10.1074/jbc.M113.484659 |
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Application of chloroplast promoters of Cyanidioschyzon merolae for exogenous protein expression.
Algae,
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351-358.
Keywords: chloroplast promoters; chloroplast transformation; Cyanidioschyzon merolae Strain(s): 1332 DOI: 10.4490/algae.2018.33.12.5 |
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Enhancement mechanisms of copper(II) adsorption onto kaolinite by extracellular polymeric substances of Microcystis aeruginosa (cyanobacterium).
Int. Biodeterior. Biodegrad.,
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Keywords: Microcystis aeruginosa; Extracellular polymeric substances; Copper(II); Adsorption kinetics; Adsorption isotherm Strain(s): 843 DOI: 10.1016/j.ibiod.2018.12.009 |
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Kubo, T., Abe, J., Saito, T., Matsuda, Y.
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Genealogical relationships among laboratory strains of Chlamydomonas reinhardtii as inferred from matrix metalloprotease genes.
Curr. Genet.,
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Keywords: Chlamydomonas reinhardtii; Chlamydomonas smithii; matrix metalloprotease genes; molecular phylogeny Strain(s): 2235 PubMed: 12073093 DOI: 10.1007/s00294-002-0284-0 |
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Effective determination method for a cyanobacterial neurotoxin, β-N-methylamino-L-alanine.
Toxicon,
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Keywords: Cyanobacteria; Neurotoxin; BMAA; LC–ESI-MS; HILIC; SIM Strain(s): 88 PubMed: 18407310 DOI: 10.1016/j.toxicon.2008.02.015 |
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Kubo, T., Saito, T., Fukuzawa, H., Matsuda, Y.
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Two tandemly-located matrix metalloprotease genes with different expression patterns in the Chlamydomonas sexual cell cycle.
Curr. Genet.,
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Keywords: cell wall degradation; Chlamydomonas reinhardtii; gametolysin; zygote-specific gene Strain(s): 2235 PubMed: 11680823 DOI: 10.1007/s002940100239 |
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Kuchitsu, K., Oh-hama, T., Tsuzuki, M., Miyachi, S.
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Detection and characterization of acidic compartments (vacuoles) in Chlorella vulgaris 11h cells by 31P-in vivo NMR spectroscopy and cytochemical techniques.
Arch. Mikrobiol.,
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Strain(s): 2160 |
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Kuchitsu, K., Tsuzuki, M., Miyachi, S.
1988
Changes of starch localization within the chloroplast induced by changes in CO2 concentration during growth of Chlamydomonas reinhardtii. Independent regulation of pyrenoid starch and stroma starch.
Plant Cell Physiol.,
29,
1269-1278.
Keywords: Chlamydomonas (Chlorophyta); chloroplast; CO2 concentration; pyrenoid; starch; stroma Strain(s): 2235 DOI: 10.1093/oxfordjournals.pcp.a077635 |
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Kuchitsu, K., Tsuzuki, M., Miyachi, S.
1988
Characterization of the pyrenoid isolated from unicellular green alga Chlamydomonas reinhardtii. Particulate form of RuBisCO protein.
Protoplasma,
144,
17-24.
Keywords: Chlamydomonas; pyrenoid; ribulose-1,5-bisphosphate carboxylase/oxygenase (RuBisCO); stroma Strain(s): 2235 DOI: 10.1007/BF01320276 |
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Kumagai, M., Takamura, Y., Yagi, O., Sudo, R.
1986
Interactions between Microcystis aeruginosa and Moraxella nonliquefaciens.
Jpn. J. Limnol.,
47,
219-228 (in Japanese with English summary).
Keywords: blue-green algae; Microcystis; interaction Strain(s): 604 |
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Kumazaki, S., Akari, M., Hasegawa, M.
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Transformation of thylakoid membranes during differentiation from vegetative cell into heterocyst visualized by microscopic spectral imaging.
Plant Physiol.,
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Strain(s): 2095 PubMed: 23274239 DOI: 10.1104/pp.112.206680 |
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Kume, N., Isono, T., Katoh, T.
1982
Stability of cyanobacterial phycobilisomes in reference to their concentration.
Photobiochem. Photobiophys.,
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Strain(s): 2093 |
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Kume, N., Katoh, T.
1982
Dissociation kinetics of Anabaena phycobilisomes.
Plant Cell Physiol.,
23,
803-812.
Keywords: Anabaena variabilis; blue-green alga; dissociation kinetics; molecular assembly; phycobiliprotein; phycobilisome Strain(s): 2093 DOI: 10.1093/oxfordjournals.pcp.a076414 |
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Kuno, S., Yoshida, T., Kamikawa, R., Hosoda, N., Sako, Y.
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The distribution of a phage-related insertion sequence element in the cyanobacterium, Microcystis aeruginosa.
Microbes Environ.,
25,
295-301.
Keywords: cyanobacteria; Microcystis; cyanophage; insertion sequence; horizontal gene transfer Strain(s): 90, 91, 98, 99, 101, 102, 112, 298, 604, 843, 1058, 1067, 1070, 1086, 1098, 1105 DOI: 10.1264/jsme2.ME10125 |
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Yoshida, T., Takashima, Y., Tomaru Y., Shirai, Y., Takao, Y., Hiroishi, S., Nagasaki, K.
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Intricate interactions between the bloom-forming cyanobacterium Microcystis aeruginosa and foreign genetic elements, revealed by diversified clustered regularly interspaced short palindromic repeat (CRISPR) signatures.
Appl. Environ. Microbiol.,
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Strain(s): 87, 102, 298 PubMed: 22636003 DOI: 10.1128/AEM.00626-12 |
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Kunugi, M., Matsumoto, M., Kondo, K.
2010
Effect of culture conditions on production of useful materials by Haematococcus pluvialis.
Bull. Soc. Sea Water Sci., Jpn,
64,
297-304.
Keywords: biomass; microalgae; carbon dioxide; useful material production Strain(s): 144 |
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2016
Evolution of green plants accompanied changes in light-harvesting systems.
Plant Cell Physiol.,
57,
1231-1243.
Keywords: Evolution; Green algae; Land plants; Light adaptation; Photosystem Strain(s): 254, 1419, 2541, 2582 PubMed: 27057002 DOI: 10.1093/pcp/pcw071 |
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Kuramoto, T., Iwamoto, K., Izumi, M., Kirihata, M., Yoshizako, F.
1999
Asymmetric reduction of ethyl 2-methyl 3-oxobutanoate by Chlorella.
Biosci. Biotechnol. Biochem.,
63,
598-601.
Keywords: Chlorella; asymmetric reduction; ethyl 2-methyl 3-oxobutanoate; (2S, 3S)-ethyl 2-methyl 3-hydroxybutanoate; (2S, 3R)-ethyl 2-methyl 3-hydroxybutanoate Strain(s): 226, 227 PubMed: 10227152 DOI: 10.1271/bbb.63.598 |
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Kuroda, M., Horino, T., Inoue, D., Morikawa, M., Ike, M.
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Biomass production and nutrient removal through cultivation of Euglena gracilis in domestic wastewater.
Jpn. J. Water Treat. Biol.,
54,
105-113.
Keywords: Euglena gracilis; biomass production; domestic wastewater; nutrient removal Strain(s): 48 DOI: 10.2521/jswtb.54.105 |
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Kuroiwa, T.
1998
The primitive red algae Cyanidium caldarium and Cyanidioschyzon merolae as model system for investigating the dividing apparatus of mitochondria and plastids.
Bioessays,
20,
344-354.
Strain(s): 3377 DOI: 10.1002/(SICI)1521-1878(199804)20:4<344::AID-BIES11>3.0.CO;2-2 |
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Kuroiwa, T., Kuroiwa, H., Sakai, A., Takahashi, H., Toda, K., Itoh, R.
1998
The division apparatus of plastids and mitochondria.
Int. Rev. Cytol.,
181,
1-41.
Keywords: Cytokinesis; Organellokinesis; Organelle division; Mitochondrial division; Plastid division; FtsZ; Contractile ring; Cell division Strain(s): 3377 DOI: 10.1016/S0074-7696(08)60415-5 |
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Kuroiwa, T., Ohnuma, M., Imoto, Y., Misumi, O., Nagata, N., Miyakawa, I., Fujishima, M., Yagisawa, F., Kuroiwa, H.
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Genome size of the ultrasmall unicellular freshwater green alga, Medakamo hakoo 311, as determined by staining with 4′,6-diamidino-2-phenylindole after microwave oven treatments: II. Comparison with Cyanidioschyzon merolae, Saccharomyces cerevisiae (n, 2n), and Chlorella variabilis.
Cytologia,
81,
69-76.
Keywords: Ultrasmall genome size; Medakamo hakoo; Saccharyomyces cerevisiae; Chlorella variabilis; DAPI staining; Microwave oven Strain(s): 3377 DOI: 10.1508/cytologia.81.69 |
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Kuroiwa, T., Ohnuma, M., Nozaki, H., Imoto, Y., Misumi, O., Kuroiwa, H.
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Cytological evidence of cell-nuclear genome size of a new ultra-small unicellular freshwater green alga, “Medakamo hakoo” strain M-hakoo 311 I. Comparison with Cyanidioschyzon merolae and Ostreococcus tauri.
Cytologia,
80,
143-150.
Keywords: Ultra-small alga; Chlorophyte M. hakoo; Cyanidioschyzon merolae; Ostreococcus tauri; Genome size; Cytochemistry Strain(s): 2673, 3377 DOI: 10.1508/cytologia.80.143 |
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Kuroiwa, T., Suzuki, T., Ogawa, K., Kawano, S.
1981
The chloroplast nucleus: Distribution, number, size and shape, and a model for the multiplication of the chloroplast genome during chloroplast development.
Plant Cell Physiol.,
22,
381-396.
Keywords: chloroplast nuclei; classification (chloroplast); development (Chloroplast); division cycle (chloroplast) Strain(s): 47, 2572 DOI: 10.1093/oxfordjournals.pcp.a076181 |
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Kuroiwa, Y., Al-Maamari, R. S., Tasaki, M., Okamura, K., Sueyoshi, M., Nakashima, A., Yoshida, E., Suzuki, K.
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Spirulina subsalsa var. salina var. nov.: Thermo-halotolerant cyanobacteria accumulating two kinds of compatible solute, originated from the Sultanate of Oman.
J. Environ. Biotechnol.,
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43-56.
Keywords: Spirulina subsalsa var. salina var. nov.; Halospirulina; halotolerant; glycine betamine; O-α-D-glucopyranosyl-(1→2)-glycerole Strain(s): 3373 |
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Kushibiki, A., Yokoyama, A., Iwataki, M., Yokoyama, J., West, J. A., Hara, Y.
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New unicellular red alga, Bulboplastis apyrenoidosa gen. et sp. nov. (Rhodellophyceae, Rhodophyta) from the mangroves of Japan: Phylogenetic and ultrastructural observations.
Phycol. Res.,
60,
114-122.
Keywords: Bulboplastis apyrenoidosa; chloroplast; Golgi body; mannitol; nucleus-associated organelles; small subunit rDNA; ultrastructure; unicellular red alga Strain(s): 2742 DOI: 10.1111/j.1440-1835.2012.00643.x |
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Kusui, T., Itatsu, Y., Jin, J.
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Whole effluent toxicity assessment of industrial effluents.
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Strain(s): 35 DOI: 10.1007/978-1-4939-7425-2_17 |
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Kusumi, T., Ooi, T., Watanabe, M. M. Takahashi, H., Kakisawa, H.
1987
Cyanoviridin RR, a toxin from the cyanobacterium (blue-green alga) Microcystis viridis.
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Whole effluent toxicity assessment of industrial effluents in Toyama, Japan with a battery of short-term chronic bioassays.
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Keywords: aqquatic organism; ecotoxic effect; industrial effluent; whole effluent toxicity (WET) Strain(s): 35 DOI: 10.2965/jwet.2014.55 |
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Kuwata, A., Yamada, K., Ichinomiya, M., Yoshikawa, S., Tragin, M., Vaulot, D., Lopes dos Santos, A.
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Bolidophyceae, a sister picoplanktonic group of diatoms – a review.
Front. Mar. Sci.,
5,
370 (article ID).
Keywords: bolidophyceae; parmales; diatoms; genetic diversity; mitosis; geographical distribution; seasonal dynamics and silicification Strain(s): 2565, 2682, 3369, 3370, 3371, 3699, 3700, 3701 DOI: 10.3389/fmars.2018.00370 |
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A microreactor system for cultivation of Haematococcus pluvialis and astaxanthin production.
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Keywords: Astaxanthin; Haematococcus pluvialis; Microfluidic Devices; Nile Red; PDMS Strain(s): 144 PubMed: 26353702 DOI: 10.1166/jnn.2015.9321 |
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Lababpour, A., Hada, K., Shimahara, K., Katsuda, T., Katoh, S.
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Effects of nutrient supply methods and illumination with blue light emitting diodes (LEDs) on astaxanthin production by Haematococcus pluvialis.
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Lababpour, A., Shimahara, K., Hada, K., Kyoui, Y., Katsuda, T., Katoh, S.
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Fed-batch culture under illumination with blue light emitting diodes (LEDs) for astaxanthin production by Haematococcus pluvialis.
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Mitochondrial genome conformation among CW-group Chlorophycean algae.
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Development of models of threshold and efficient algal densities for larval and juvenile tilapia Oreochromis niloticus on raw Spirulina.
Aquaculture,
285,
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Keywords: assimilation; 14C labeling; CERAS (closed ecological recirculating aquaculture system); density; ingestion; Spirulina; Oreochromis niloticus Strain(s): 39 DOI: 10.1016/j.aquaculture.2008.08.039 |
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Lu, J., Takeuchi, T.
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Spawning and egg quality of the tilapia Oreochromis niloticus fed solely on raw Spirulina throughout three generations.
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Lu, J., Takeuchi, T., Satoh, H.
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Ingestion and assimilation of three species of freshwater algae by larval tilapia Oreochromis niloticus.
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Ingestion, assimilation and utilization of raw Spirulina by larval tilapia Oreochromis niloticus during larval development.
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Evaluation of filamentous heterocystous cyanobacteria for integrated pig-farm biogas slurry treatment and bioenergy production.
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A novel fed-batch strategy to boost cyst cells production based on the understanding of intracellular carbon and nitrogen metabolism in Haematococcus pluvialis.
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The presence of toxic and non-toxic Cyanobacteria in the sediments of the Limpopo River Basin: Implications for human health.
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Characterization of cyanobacterial carotenoid ketolase CrtW and hydroxylase CrtR by complementation analysis in Escherichia coli.
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Makino, W., Ban, S.
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Occurrence of multiple, independent gene fusion events for the fifth and sixth enzymes of pyrimidine biosynthesis in different eukaryotic groups.
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Diversity of active marine picoeukaryotes in the Eastern Mediterranean Sea unveiled using photosystem-II psbA transcripts.
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Development of sensitive and specific multiplex PCR method for the detection of microcystin producing cyanobacteria in spirulina food supplements.
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Water quality comparison of secondary effluent and reclaimed water to ambient river water of southern Okinawa Island via biological evaluation.
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Evaluating the joint toxicity of two benzophenone-type UV filters on the Ggreen alga Chlamydomonas reinhardtii with response surface methodology.
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Nested in the Chlorellales or independent class? Phylogeny and classification of the Pedinophyceae (Viridiplantae) revealed by molecular phylogenetic analyses of complete nuclear and plastid-encoded rRNA operons.
Protist,
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Flagellar hairs in prasinophytes (Chlorophyta): ultrastructure and distribution on the flagellar surface.
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Mitochondrial genomes from two red tide forming raphidophycean algae Heterosigma akashiwo and Chattonella marina var. marina.
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Prasinoxanthin is absent in the green-colored dinoflagellate Lepidodinium chlorophorum strain NIES-1868: pigment composition and 18S rRNA phylogeny.
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Protist,
162,
268-276.
Strain(s): 626, 1419, 1868, 2432 PubMed: 20829107 DOI: 10.1016/j.protis.2010.07.001 |
|
Matsunaga, N., Uehara, A., Murase, N., Kuriyoma, A.
2018
Cryopreservation of Spirulina (Arthrospira) platensis NIES-46 by snap-freezing considering trichome morphology.
Cryobiology and Cryotechnology,
64,
75-83.
Keywords: Spirulina (Arthrospira) platensis; cyanobacteria; snap-freezing; cryopreservation; trichome morphology Strain(s): 46 DOI: 10.20585/cryobolcryotechnol.64.2_75 |
|
Matsunaga, S., Hori, T., Takahashi, T., Kubota, M., Watanabe, M., Okamoto, K., Masuda, K., Sugai, M.
1998
Discovery of signaling effect of UV-B/C light in the extended UV-A/blue-type action spectra for step-down and step-up photo-phobic responses in the unicellular flagellate alga Euglena gracilis.
Protoplasma,
201,
45-52.
Keywords: action spectra; blue light; Euglena; photophobic responses; ultraviolet light Strain(s): 48 DOI: 10.1007/BF01280710 |
|
Matsunaga, S., Takahashi, T., Watanabe, M., Sugai, M., Hori, T.
1999
Control by ammonium ion of the change from step-up to step-down photophobically responding cells in the flagellate alga Euglena gracilis.
Plant Cell Physiol.,
40,
213-221.
Keywords: ammonium ion; blue light; Euglena; greening; photophobic responses Strain(s): 48 DOI: 10.1093/oxfordjournals.pcp.a029530 |
|
Matsunaga, S., Watanabe, S., Sakaushi, S., Miyamura, S., Hori, T.
2003
Screening effect diverts the swimming directions from diaphototactic to positive phototactic in a disk-shaped green flagellate Mesostigma viride.
Photochem. Photobiol.,
77,
324-332.
Strain(s): 476, 477 PubMed: 12685662 DOI: 10.1562/0031-8655(2003)077<0324:SEDTSD>2.0.CO;2 |
|
Matsuo, E., Inagaki, Y.
2018
Patterns in evolutionary origins of heme, chlorophyll a and isopentenyl diphosphate biosynthetic pathways suggest non-photosynthetic periods prior to plastid replacements in dinoflagellates.
PeerJ,
6,
e5345 (article ID).
Strain(s): 1868 PubMed: 30083465 DOI: 10.7717/peerj.5345 |
|
Matsuo, M., Katahata, A., Satoh, S., Matsuzaki, M., Nomura, M., Ishida, K. I., Inagaki, Y., Obokata, J.
2018
Characterization of spliced leader transsplicing in a photosynthetic rhizarian amoeba, Paulinella micropora, and its possible role in functional gene transfer.
PLoS One,
13,
e0200961 (article ID).
Strain(s): 4060 PubMed: 30024971 DOI: 10.1371/journal.pone.0200961 |
|
Matsushita, T., Kobayashi, Y., Nakamura, K., Matsui, Y., Ohno, K.
2010
Effect of transmembrane pressure on geosmin release from Cyanobacterial cell during microfiltration.
Water Practice & Technology,
5,
wpt2010049 (article ID).
Keywords: Cyanobacteria; geosmin; microfiltration; water treatment Strain(s): 824 |