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Preparation of knockdown transformants of unicellular charophycean alga, Closterium peracerosum-strigosum-littorale complex.
Bio-protocol,
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Keywords: Knockdown; Alga; Closterium; Charophycean; Transformation Strain(s): 67, 68 DOI: 10.21769/BioProtoc.1813 |
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Keywords: charophycean; Closterium; conjugation; gamete; Concanavalin A (Con A); sexual reproduction Strain(s): 67, 68 PubMed: 27468295 DOI: 10.3389/fpls.2016.01040 |
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Keywords: Anabaena variabilis; CO2 accumulation; cyanobacterial growth; photosynthesis; sodium Strain(s): 2093 DOI: 10.1093/oxfordjournals.pcp.a077343 |
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Transport and fixation of inorganic carbon during photosynthesis in the cells of Anabaena grown under ordinary air. III. Some characteristics of the HCO3-transport system in cells grown under ordinary air.
Plant Cell Physiol.,
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Keywords: Anabaena; carbonic anhydrase; IC transport; photosynthesis; sodium Strain(s): 2093 DOI: 10.1093/oxfordjournals.pcp.a077368 |
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Transport and fixation of inorganic carbon during photosynthesis of Anabaena grown under ordinary air. I. Active species of inorganic carbon utilized for photosynthesis.
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Keywords: Anabaena; carbon dioxide fixation; cyanobacterium; IC transport photosynthesis Strain(s): 2093 DOI: 10.1093/oxfordjournals.pcp.a077293 |
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Biotechnol. Biofuels,
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Synergistic enhancement of glycogen production in Arthrospira platensis by optimization of light intensity and nitrate supply.
Bioresour. Technol.,
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Plant Cell Physiol.,
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Keywords: carbonic anhydrase; Dunaliella; phosphoenolpyruvate carboxylase; photosynthesis; Porphyridium Strain(s): 2138 DOI: 10.1093/oxfordjournals.pcp.a077016 |
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Utilization of water chestnut for reclamation of water environment and control of cyanobacterial blooms.
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Mucilage secretion regulated by sex pheromones in Closterium peracerosum-strigosum-littorale complex.
Plant Cell Physiol.,
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Keywords: Closterium; mucilage; sex pheromone; sexual reproduction Strain(s): 67, 68 DOI: 10.1093/pcp/pcg131 |
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Physiological characterization of the sex pheromone protoplast-release-inducing protein from the Closterium peracerosum-strigosum-littorale complex (Charophyta).
Phycol. Res.,
54,
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Keywords: Closterium; conjugation; mucilage; protoplast release; sex pheromone; sexual reproduction Strain(s): 67, 68 DOI: 10.1111/j.1440-1835.2006.00418.x |
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40,
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Keywords: Planktothrix rubescens; Planktothrix agardhii; Microcystin immunoassay; Single filaments; Cyanobacteria Strain(s): 595 DOI: 10.1016/j.watres.2006.02.020 |
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Nitrification of anaerobic digestate using a consortium of microalgae and nitrifiers in an open photobioreactor with moving bed carriers.
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Keywords: Energy-saving process; Photo-oxygenation; Short-cut nitrogen removal; Ammonium removal pathway; Empirical model Strain(s): 2173 PubMed: 31954203 DOI: 10.1016/j.watres.2019.115445 |
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Desalin. Water Treat.,
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Keywords: Velocity gradient; Rapid mixing time; Picophytoplankton; Floc formation and breakage; Turbidity removal Strain(s): 1348 DOI: 10.1080/19443994.2013.787951 |
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Desalin. Water Treat.,
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Isolation and structure determination of algicidal compounds from Ulva fasciata.
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Algicidal activity of polyunsaturated fatty acids derived from Ulva fasciata and U. pertusa (Ulvaceae, Chlorophyta) on phytoplankton.
J. Appl. Phycol.,
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Keywords: Algicidal compound; Red tide phytoplankton; Ulva fasciata; Ulva pertusa Strain(s): 1, 3, 7, 221, 251, 252, 254, 359, 381, 462, 486 DOI: 10.1007/s10811-007-9257-5 |
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Selective toxic effects of polyunsaturated fatty acids derived from Ulva fasciata on red tide phytoplankter species.
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A resin cyanoacrylate nanoparticle as an acute cell death inducer to broad spectrum of microalgae.
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54,
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Keywords: Cell death; Coccolith; Non-green algae; ROS; Poly (isobutylcyanoacrylate) nanoparticles Strain(s): 1, 5, 7, 15, 274, 331, 534, 590, 615, 699, 712, 900, 1017, 1308, 1310, 2411, 2764, 2778 DOI: 10.1016/j.algal.2021.102191 |
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Extremophiles,
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Mar. Drugs,
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Keywords: cyanobacteria; toxic Microcystis; anticoagulant; fVIIa-sTF inhibitors; peptides; aeruginosins; blood coagulation cascade Strain(s): 89, 102, 103, 107, 298, 1025, 1043, 1058, 1071, 1085, 1099, 1133 PubMed: 26729138 DOI: 10.3390/md14010007 |
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A novel method using cyanobacteria for ecotoxicity test of veterinary antimicrobial agents.
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Keywords: algal growth potential (AGP); bioindicator; dichloromethane; organic solvents; trichloroethlene Strain(s): 35, 227, 545 DOI: 10.1264/jsme2.18.43 |
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The origin of dihydroorotate dehydrogenase genes of kinetoplastids, with special reference to their biological significance and adaptation to anaerobic, parasitic conditions.
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Photosynth. Res.,
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Protist,
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Molecular mechanisms for Pb removal by Cyanidiales: a potential biomaterial applied in thermo-acidic conditions.
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Morphological characterization and molecular phylogenetic analysis of Dolichospermum hangangense (Nostocales, Cyanobacteria) sp. nov. from Han River, Korea.
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Photoalteration of dissolved organic matter (DOM) released from Microcystis aeruginosa in different growth phases: DOM-fraction distribution and biodegradability.
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Development of large-scale and economic pH control system for outdoor cultivation of microalgae Haematococcus pluvialis using industrial flue.
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Molecular markers from different genomic compartments reveal cryptic diversity within glaucophyte species.
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Morphology, genetic diversity, temperature tolerance and toxicity of Cylindrospermopsis raciborskii (Nostocales, Cyanobacteria) strains from Thailand and Japan.
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Haemagglutinating and antibiotic activities of freshwater microalgae.
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Evaluating the species boundaries of green microalgae (Coccomyxa, Trebouxiophyceae, Chlorophyta) using integrative taxonomy and DNA barcoding with further implications for the species identification in environmental samples.
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PhytoREF: a reference database of the plastidial 16S rRNAgene of photosynthetic eukaryotes with curated taxonomy.
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Algal ancestor of land plants was preadapted for symbiosis.
Proc. Natl. Acad. Sci. U. S. A.,
112,
13390-13395
Keywords: symbiosis; plant evolution; algae; plant–microbe interactions; phylogeny Strain(s): 67 PubMed: 26438870 DOI: 10.1073/pnas.1515426112 |
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Delmont, T. O., Eren, A. M.
2018
Linking pangenomes and metagenomes: the Prochlorococcus metapangenome.
PeerJ,
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Strain(s): 2880 PubMed: 29423345 DOI: 10.7717/peerj.4320 |
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Delrue, F., Cerqueira, M. R. D., Compadre, A., Alvarez, P., Fleury, G., Escoffier, C., Sassi, J. F.
2021
Hydroponic farm wastewater treatment using an indigenous consortium.
Processes,
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519 (article ID).
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Demura, M., Kawachi, M., Kunugi, M., Nishizawa, T., Kasai, F., Watanabe, M. M.
2007
Development of microsatellite markers for the red tide-forming harmful species Chattonella antiqua, C. marina, and C. ovata (Raphidophyceae).
Mol. Ecol. Notes,
7,
315-317.
Keywords: Chattonella; harmful algal bloom; microsatellite; phytoplankton; Raphidophyceae; red tide Strain(s): 2 DOI: 10.1111/j.1471-8286.2006.01592.x |
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Demura, M., Nakayama, T., Kasai, F., Kawachi, M.
2014
Genetic structure of Japanese Chattonella marina (Raphidophyceae) populations revealed using microsatellite markers.
Phycol. Res.,
62,
102-108.
Keywords: Chattonella marina var. antiqua; Chattonella marina var. marina; genetic structure; isolation by distance; microsatellite marker; population genetics Strain(s): 1, 2, 3, 14, 83, 84, 85, 86, 113, 114, 115, 116, 118, 121, 161, 557, 1974, 1975, 1976, 1977, 1978, 1980, 1981, 1982, 1983, 1984, 2383, 2384, 2385, 2386, 2387, 2388, 2389, 2390, 2391, 2392, 2393, 2394, 2395, 2396, 2397, 2398, 2399, 2400, 2401, 2402, 2403, 2404, 2405, 2406, 2407, 2509, 2510, 2511, 2512, 2513, 2514, 2515, 2516, 2517, 2518 DOI: 10.1111/pre.12047 |
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Demura, M., Noël, M.-H., Kasai, F., Watanabe, M. M., Kawachi, M.
2009
Taxonomic revision of Chattonella antiqua, C. marina and C. ovata (Raphidophyceae) based on their morphological characteristics and genetic diversity.
Phycologia,
48,
518-535.
Keywords: Chattonella antiqua; Chattonella marina; Chattonella ovata; COI; COX1; Genetic diversity; ITS; Microsatellite; Morphology; Phylogeny; Population; Raphidophyceae; rbcL; Speciation; Taxonomy Strain(s): 1, 2, 3, 5, 6, 9, 10, 14, 83, 84, 85, 113, 114, 116, 118, 146, 161, 293, 557, 561, 603, 671, 716, 849, 1974, 1975, 1976, 1977, 1978, 1980, 1981, 1982, 1983, 1984, 1986, 2383, 2384, 2385, 2386, 2387, 2388, 2389, 2391, 2392, 2393, 2394, 2395, 2396, 2397, 2398, 2399, 2400, 2401, 2402, 2403, 2404, 2405, 2406, 2407 DOI: 10.2216/08-98.1 |
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Denboh, T., Hendrayanti, D., Ichimura, T.
2001
Monophyly of the genus Closterium and the order Desmidiales (Charophyceae, Chlorophyta) inferred from nuclear small subunit rDNA data.
J. Phycol.,
37,
1063-1072.
Keywords: Charophyceae; Closterium; desmid; molecular phylogeny; placoderm; SSU rDNA; Zygnematales Strain(s): 52, 125, 165, 170, 174, 175, 180, 181, 185, 187, 188, 191, 194, 198, 199, 200, 271, 339, 449 DOI: 10.1046/j.1529-8817.2001.00146.x |
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Denboh, T., Ichimura, T., Hendrayanti, D., Coleman, A. W.
2003
Closterium moniliferum-ehrenbergii (Charophyceae, Chlorophyta) species complex viewed from the 1506 Group I intron and ITS2 of nuclear rDNA.
J. Phycol.,
39,
960-977.
Keywords: biological species; Closterium; group I introns; ITS2; mating group; molecular phylogeny; speciation Strain(s): 172, 173, 174, 182, 183, 228, 229 DOI: 10.1046/j.1529-8817.2003.02145.x |
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Deodatoa, C. R., Barlow, S. B., Hovde, B. T., Cattolico, R. A.
2019
Naked Chrysochromulina (Haptophyta) isolates from lake and river ecosystems: An electron microscopic comparison including new observations on the type species of this taxon.
Algal Res.,
40,
101492.
Keywords: Chrysochromulina; Freshwater; Scale-less; Electron microscopy; Morphology; Cryptic species complexes Strain(s): 562 DOI: 10.1016/j.algal.2019.101492 |
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Devi, A., Chiu, Y.-T., Hsueh, H.-T., Lin, T.-F.
2021
Quantitative PCR based detection system for cyanobacterial geosmin/2-methylisoborneol (2-MIB) events in drinking water sources: Current status and challenges.
Water Res.,
188,
116478 (article ID).
Keywords: biomolecular; drinking water; database; geo; mic; monitoring; Taq-Man probes Strain(s): 512, 4062, 4063, 4237, 4238 DOI: 10.1016/j.watres.2020.116478 |
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Dimier, C., Giovanni, S., Ferdinando, T., Brunet, C.
2009
Comparative ecophysiology of the xanthophyll cycle in six marine phytoplanktonic species.
Protist,
160,
397-411.
Keywords: diatoxanthin; photoprotection; phytoplankton; picoplankton; pigments; xanthophyll cycle Strain(s): 2687 PubMed: 19375387 DOI: 10.1016/j.protis.2009.03.001 |
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Dimier, C., Giovanni, S., Ferdinando, T., Brunet, C.
2009
Growth and photoregulation dynamics of the picoeukaryote Pelagomonas calceolata in fluctuating light.
Limnol. Oceanogr.,
54,
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Strain(s): 2690 DOI: 10.4319/lo.2009.54.3.0823 |
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Dionisio, M. L., Tsuzuki, M., Miyachi, S.
1989
Blue light induction of carbonic anhydrase activity in Chlamydomonas reinhardtii.
Plant Cell Physiol.,
30,
215-219.
Keywords: blue light; carbonic anhydrase; Chlamydomonas reinhardtii; enzyme induction; photoreceptor Strain(s): 2235 DOI: 10.1093/oxfordjournals.pcp.a077732 |
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Dionisio, M. L., Tsuzuki, M., Miyachi, S.
1989
Light requirement for carbonic anhydrase induction in Chlamydomonas reinhardtii.
Plant Cell Physiol.,
30,
207-213.
Keywords: blue light; carbonic anhydrase; Chlamydomonas reinhardtii; enzyme induction; light intensity Strain(s): 2235 DOI: 10.1093/oxfordjournals.pcp.a077731 |
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Dionisio-Sese, M. L., Fukuzawa, H., Miyachi, S.
1990
Light-induced carbonic anhydrase expression in Chlamydomonas reinhardtii.
Plant Physiol.,
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Strain(s): 2235 PubMed: 16667803 DOI: 10.1104/pp.94.3.1103 |
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Dionisio-Sese, M. L., Miyachi, S.
1992
The effect of sodium chloride on carbonic anhydrase activity in marine microalgae.
J. Phycol.,
28,
619-624.
Keywords: carbonic anhydrase; Cl- activation; Cl- inhibition; marine microalgae; NaCl effect; photosynthesis Strain(s): 2168 DOI: 10.1111/j.0022-3646.1992.00619.x |
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Dittami, S. M., Riisberg, I., Edvardsen, B.
2013
Molecular probes for the detection and identification of ichthyotoxic marine microalgae of the genus Pseudochattonella (Dictyochophyceae, Ochrophyta).
Environ. Sci. Pollut. Res.,
20,
6824-6837.
Keywords: Harmful algae; Dot blot hybridizations; PCR assays; DNA microarrays; Quantitative real-time PCR Strain(s): 670 PubMed: 23361173 DOI: 10.1007/s11356-012-1402-2 |
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do Amaral, S. C., Monteiro, P. R., Neto, J. d. S. P., Serra, G. M., Gonçalves, E. C., Xavier, L. P., Santos, A. V.
2021
Current knowledge on microviridin from cyanobacteria.
Mar. Drugs,
19,
17 (article ID).
Keywords: biotechnology; cyanobacteria; ecology; microviridin; oligopeptide Strain(s): 298, 834, 1211 PubMed: 33406599 DOI: 10.3390/md19010017 |
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Domínguez-Bocanegra, A. R., Legarreta, I. G., Jeronimo, F. M.
2004
Influence of environmental and nutritional factors in the production of astaxanthin from Haematococcus pluvialis.
Bioresour. Technol.,
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Keywords: Haematococcus; Astaxanthin production; Light intensity; Aeration Strain(s): 144 PubMed: 14693455 DOI: 10.1016/j.biortech.2003.04.001 |
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Domínguez-Bocanegra, A. R., Ponce-Noyola, T., Torres-Muñoz, J. A.
2007
Astaxanthin production by Phaffia rhodozyma and Haematococcus pluvialis: a comparative study.
Appl. Microbiol. Biotechnol.,
75,
783-791.
Keywords: Haematococcus pluvialis; Phaffia rhodozyma; Astaxanthin synthesis; Coconut milk Strain(s): 144 PubMed: 17333170 DOI: 10.1007/s00253-007-0889-9 |
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Domínguez-Martín, M. A., Gómez-Baena, G., Díez J., López-Grueso, M. J., Beynon, R. J., García-Fernández, J. M.
2017
Quantitative proteomics shows extensive remodeling induced by nitrogen limitation in Prochlorococcus marinus SS120.
mSystems.,
2,
e00008-17 (article ID).
Keywords: marine cyanobacteria; nitrogen limitation; nitrogen metabolism; prochlorococcus; quantitative proteomics Strain(s): 2880 PubMed: 28593196 DOI: 10.1128/mSystems.00008-17 |
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Donia, M. S., Schmidt, E. W.
2011
Linking chemistry and genetics in the growing cyanobactin natural products family.
Chem. Biol.,
18,
508-519.
Strain(s): 596 PubMed: 21513887 DOI: 10.1016/j.chembiol.2011.01.019 |
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Dorantes-Aranda, J. J., Nichols, P. D., Waite, T. D., Hallegraeff, G. M.
2013
Strain variability in fatty acid composition of Chattonella marina (Raphidophyceae) and its relation to differing ichthyotoxicity toward rainbow trout gill cells.
J. Phycol.,
2,
427-438.
Keywords: Aldehydes; Chattonella marina; fatty acids; harmful phytoplankton; ichthyotoxicity; rainbow trout gill cell line; RT gill-W1 Strain(s): 118 PubMed: 27008528 DOI: 10.1111/jpy.12053 |
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Dorrell, R. G., Azuma, T., Nomura, M., Audren de Kerdrel, G., Paoli, L., Yang, S., Bowler, C., Ishii, K.-I., Miyashita, H., Gile, G. H., Kamikawa, R.
2019
Principles of plastid reductive evolution illuminated by nonphotosynthetic chrysophytes.
Proc. Natl. Acad. Sci. U. S. A.,
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6914-6923.
Keywords: heterotrophy; ochrophyte; phylogenomics; dual targeting; protist Strain(s): 1846 PubMed: 30872488 DOI: 10.1073/pnas.1819976116 |
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Dorrell, R. G., Drew, J., Nisbet, R. E., Howe, C. J.
2014
Evolution of chloroplast transcript processing in Plasmodium and its chromerid algal relatives.
PLoS Genet.,
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Strain(s): 4391 PubMed: 24453981 DOI: 10.1371/journal.pgen.1004008 |
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Dreher, T. W., Davis, E. W., Mueller, R. S., Otten, T. G.
2021
Comparative genomics of the ADA clade within the Nostocales.
Harmful Algae,
104,
102037 (article ID).
Keywords: Dolichospermum; Aphanizomenon; Anabaena; Mobilome; Genome synteny; Cyanotoxin genes Strain(s): 806 PubMed: 34023075 DOI: 10.1016/j.hal.2021.102037 |
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Driscoll, C. B., Meyer, K. A., Šulčius, S., Brown, N. M., Dick, G. J., Cao, H., Gasiūnas, G., Timinskas, A., Yin, Y., Landry, Z. C., Otten, T. G., Davis, T. W., Watson, S. B., Dreher, T. W.
2018
A closely-related clade of globally distributed bloom-forming cyanobacteria within the Nostocales.
Harmful Algae,
77,
93-107.
Keywords: Genomics; Metagenomics; Filamentous cyanobacteria Strain(s): 81 PubMed: 30005805 DOI: 10.1016/j.hal.2018.05.009 |
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Du, HW., Yang, LY., Wu, J., Xiao, L., Wang, XL., Jiang, LJ.
2012
Simultaneous removal of phosphorus and nitrogen in a sequencing batch biofilm reactor with transgenic bacteria expressing polyphosphate kinase.
Appl. Microbiol. Biotechnol.,
96,
265-272.
Keywords: Poly-phosphate kinase gene; Pseudomonas putida; Sequencing batch biofilm reactor; Phosphorus removal; Nitrogen removal Strain(s): 843 PubMed: 22218771 DOI: 10.1007/s00253-011-3839-5 |
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Dufresne, A., Garczarek, L., Partensky, F.
2005
Accelerated evolution associated with genome reduction in a free-living prokaryote.
Genome Biol.,
6,
R14 (article ID).
Strain(s): 2880, 2887 PubMed: 15693943 DOI: 10.1186/gb-2005-6-2-r14 |
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Dwi, S., Hirata, K., Asada, Y., Miyamoto, K.
2001
Utilization of cyanobacterial biomass from water bloom for bioproduction of lactic acid.
World J. Microbiol. Biotech.,
17,
259-264.
Keywords: cyanobacterium; CO2 supplementation; lactic acid; Lactobacillus agilis; L. amylovorus; L. ruminis; starch; water bloom Strain(s): 23, 44 DOI: 10.1023/A:1016638619 |
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Dziga, D., Tokodi, N., Backović, D. D., Kokociński, M., Antosiak, A., Puchalski, J., Strzałka, W., Madej, M., Meriluoto, J., Svirčev, Z.
2019
The effect of a combined hydrogen peroxide-MlrA treatment on the phytoplankton community and microcystin concentrations in a mesocosm experiment in Lake Ludoš.
Toxins,
11,
725 (article ID).
Keywords: microcystin; biodegradation; hydrogen peroxide; treatment; cyanobacteria; bloom Strain(s): 107 PubMed: 31835838 DOI: 10.3390/toxins11120725 |
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Edvardsen, B., Eikrem, W., Shalchian-Tabrizi, K., Riisberg, I., Johnsen, G., Naustvoll, L., Throndsen, J.
2007
Verrucophora farcimen gen. et sp nov (Dictyochophyceae, Heterokonta) - A bloom-forming ichthyotoxic flagellate from the Skagerrak, Norway.
J. Phycol.,
43,
1054-1070.
Keywords: carotenoids; Chattonella; Dictyochophyceae; harmful algae; LSU rDNA; new taxon; phylogeny; SSU rDNA; ultrastructure Strain(s): 670 DOI: 10.1111/j.1529-8817.2007.00390.x |
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Edvardsen, B., Eikrem, W., Throndsen, J., Sáez, A. G., Probert, I., Medlin, L. K.
2011
Ribosomal DNA phylogenies and a morphological revision provide the basis for a revised taxonomy of the Prymnesiales (Haptophyta).
Eur. J. Phycol.,
46,
202-228.
Keywords: Chrysochromulinaceae; Haptophyta; phylogeny; phytoplankton; Prymnesiales; Pseudohaptolina arctica; ribosomal DNA; taxonomy Strain(s): 1333, 1393 DOI: 10.1080/09670262.2011.594095 |
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Edwin, N., Akhwale, J. K., Mwirichia, R.
2019
Phylogenetic and morphological diversity of culturable cyanobacteria from Lake Magadi in Kenya.
Afr. J. Bio. Sc.,
1,
24-31.
Keywords: Cyanobacteria; Soda lakes; Extremophiles; Lake Magadi Strain(s): 208 DOI: 10.33472/AFJBS.1.4.2019.24-31 |
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Ehara, M., Kitayama, T., Watanabe, K. I., Inagaki, Y., Hayashi-Ishimaru, Y., Ohama, T.
1999
Comprehensive molecular phylogenetic analysis of a heterokont alga (NIES 548) using genes from all three cellular compartments.
Phycol. Res.,
47,
225-231.
Keywords: cytochrome oxydase subunit I; Phaeophyceae; Tribonema; Xanthophyceae Strain(s): 548 DOI: 10.1046/j.1440-1835.1999.00166.x |
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Ehara, M., Watanabe, K. I., Kawai, H., Inagaki, Y., Hayashi-Ishimaru, Y., Ohama, T.
1998
Distribution of the mitochondrial deviant genetic code AUA for methionine in heterokont algae.
J. Phycol.,
34,
1005-1008.
Keywords: cytochrome oxydase subunit I; deviant genetic code; heterokont algae; Phaeophyceae; Xanthophyceae Strain(s): 1 DOI: 10.1046/j.1529-8817.1998.341005.x |
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Ehara, T., Ogasawara, Y., Osafune, T.
1990
Behavior of chloroplast nucleoids during the cell cycle of Chlamydomonas reinhardtii (Chlorophyta) in synchronized culture.
J. Phycol.,
26,
317-323.
Keywords: cell cycle; Chlamydomons; chloroplast division; DAPI; nucleoid Strain(s): 2235 DOI: 10.1111/j.0022-3646.1990.00317.x |
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Ehara, T., Osafune, T., Hase, E.
1985
Interactions between the nucleus and cytoplasmic organelles durihg the cell cycle of Euglena gracilis in synchronized cultures. III. Associations between the nucleus and chloroplasts at an early stage of the cell cycle under photoorganotrophic conditions (part II).
Plant Cell Physiol.,
26,
1155-1165.
Keywords: cell cycle; chloroplast-nucleus association; chloroplast-nucleoid; Euglena gracilis; three-dimensional chloroplast model Strain(s): 48 |
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Ehara, T., Osafune, T., Hase, E.
1990
Interactions between the nucleus and cytoplasmic organelles during the cell cycle of Euglena gracilis in synchronized cultures.
Exp. Cell Res.,
190,
104-112.
Strain(s): 48 DOI: 10.1016/0014-4827(90)90150-9 |
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Ehara, T., Shihira-Ishikawa, I., Osafune, T., Hase, E., Ohkuro, I.
1975
Some structural characteristics of chloroplast degeneration in cells of Euglena gracilis Z during their heterotrophic growth in darkness.
J. Electron Microscopy,
24,
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Strain(s): 48 DOI: 10.1093/oxfordjournals.jmicro.a049978 |
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Ehara, T., Sumida, S., Osafune, T.
1988
Dynamic morphological changes of organelles in Euglena gracilis Z.
J. Tokyo Med. Coll.,
46,
420-431.
Strain(s): 48 |
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Ehara, T., Sumida, S., Osafune, T., Hase, E.
1984
Interactions between the nucleus and cytoplasmic organelles during the cell cycle of Euglena gracilis in cynchronized cultures. I. Associations between the nucleus and chloroplasts at an early stage in the cell cycle under photoorganotrophic conditions (Part I).
Plant Cell Physiol.,
25,
1133-1146.
Keywords: cell cycle; chloroplast-nucleus association; chloroplast-nucleoid; chromosome; Euglena gracilis Strain(s): 48 |
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Eikrem, W., Romari, K., Latasa, M., Le Gall, F., Throndsen, J., Vaulot, D.
2004
Florenciella parvula gen. et sp. nov. (Dictyochophyceae, Heterokontophyta), a small flagellate isolated from the English Channel.
Phycologia,
43,
658-668.
Strain(s): 2684 DOI: 10.2216/i0031-8884-43-6-658.1 |
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Eio, E. J., Kawai, M., Niwa, C., Ito, M., Yamamoto, S., Toda, T.
2015
Biodegradation of bisphenol A by an algal-bacterial system.
Environ. Sci. Pollut. Res.,
22,
15145–15153.
Keywords: Algal-bacterial system; Bacterial consortium; Biodegradation; Bisphenol A; Inhibition; Photosynthetic oxygen Strain(s): 2168 PubMed: 26013738 DOI: 10.1007/s11356-015-4693-2 |
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Eisentraeger, A., Dott, W., Klein, J., Hahn, S.
2003
Comparative studies on algal toxicity testing using fluorometric microplate and Erlenmeyer flask growth-inhibition assays.
Ecotox. Environ. Safe.,
54,
346-354.
Keywords: Algal growth-inhibition assay; Algal quantification; In vivo chlorophyll fluorescence; Testing volumina; Microplate; Evaluation parameters; Toxicological endpoints; EC value; Reference toxicants Strain(s): 4282 PubMed: 12651191 DOI: 10.1016/S0147-6513(02)00099-4 |
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El Alaoui, S., Diez, J., Toribio, F., Gómez-Baena, G., Dufresne, A., García-Fernández, J. M.
2003
Glutamine synthetase from the marine cyanobacteria Prochlorococcus spp.; characterization, phylogeny and response to nutrient limitation.
Environ. Microbiol.,
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Strain(s): 2880, 2887 PubMed: 12713467 DOI: 10.1046/j.1462-2920.2003.00433.x |
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Eliáš, M. Neustupa, J.
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Pseudomarvania, gen. nov. (Chlorophyta, Trebouxiophyceae). a new genus for "budding" subaerial green algae Marvania aerophytica Neustupa et Šejnohová and Stichococcus ampulliformis Handa.
Fottea,
9,
169-177.
Keywords: evolution; Marvania; Stichococcus; phylogeny; Trebouxiophyceae; 18S rRNA Strain(s): 996 DOI: 10.5507/fot.2009.017 |
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Endo, B., Fujii, T., Kamiya, Y., Sekimoto, H.
1997
Analysis of genomic sequences encoding a sex pheromone from the Closterium peracerosum-strigosum-littorale complex.
J. Plant Res.,
110,
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Keywords: cis-element; Closterium; genomic DNA; protoplast-release- inducing protein (PR-IP); sex pheromone; transcription Strain(s): 67, 68 DOI: 10.1007/BF02506807 |
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Engesmo, A., Strand, D., Gran-Stadniczeñko, S., Edvardsen, B., Medlin, LK., Eikrem, W.
2018
Development of a qPCR assay to detect and quantify ichthyotoxic flagellates along the Norwegian coast, and the first Norwegian record of Fibrocapsa japonica (Raphidophyceae).
Harmful Algae,
75,
105-117.
Keywords: Karenia mikimotoi; Karlodinium veneficum; Heterosigma akashiwo; Molecular monitoring; rDNA; 454 high throughput environmental; sequencing; SEM Strain(s): 15 PubMed: 29778220 DOI: 10.1016/j.hal.2018.04.007 |
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Erata, M., Chihara, M.
1987
Cryptomonads from the Sugadaira-Moor, Central Japan.
Bull. Sugadaira Mont. Res. Center, Univ. Tsukuba,
8,
57-69 (in Japanese with English summary).
Strain(s): 706, 713, 714, 715 |
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Erata, M., Chihara, M.
1989
Re-examination of Pyrenomonas and Rhodomonas (Class Cryptophyceae) through ultrastructural survey of red pigmented cryptomonads.
Bot. Mag. Tokyo,
102,
429-443.
Keywords: nucleomorph; periplastidal compartment; Pyrenomonas; Rhodomonas Strain(s): 697, 698, 699, 700, 701, 702, 705, 706 DOI: 10.1007/BF02488125 |
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Erata, M., Chihara, M.
1991
Cryptomonads of Japan (2) three species of Chroomonas.
J. Jpn. Bot.,
66,
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Erata, M., Kubota, M., Takahashi, T., Inouye, I., Watanabe, M.
1995
Ultrastructure and phototactic action spectra of two genera of cryptophyte flagellate algae, Cryptomonas and Chroomonas.
Protoplasma,
188,
258-266.
Keywords: action spectrum; Chroomonas; Cryptomonas; cryptophyte; eyespot; phototaxis; phycobilin Strain(s): 707, 714 DOI: 10.1007/BF01280378 |
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Erhard, M., von Döhren, H., Jungblut, P.
1997
Rapid typing and elucidation of new secondary metabolites of intact cyanobacteria using MALDI-TOF mass spectrometry.
Nat. Biotechnol.,
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Differential drawdown of ammonium, nitrate, and urea by freshwater chlorophytes and Cyanobacteria.
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56,
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Fang, L., Leliaert, F., Novis, P. M., Zhang, Z., Zhu, H., Liu, G., Penny, D., Zhong, B.
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Improving phylogenetic inference of core Chlorophyta using chloroplastsequences with strong phylogenetic signals and heterogeneous models.
Mol. Phylogenet. Evol.,
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Keywords: Green algae; Phylogenomics; GC-heterogeneous sites; Heterogeneous models; Phylogenetic signals Strain(s): 154, 537, 1837, 1838 PubMed: 29885933 DOI: 10.1016/j.ympev.2018.06.006 |
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Faria, D. G., Kato, A., de la Peña, M., Suda, S.
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Taxonomy and phylogeny of Nephroselmis clavistella sp. nov. (Nephroselmidophyceae, Chlorophyta).
J. Phycol.,
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Keywords: molecular phylogeny; morphology; Nephroselmidophyceae; Nephroselmis clavistella sp. nov.; scale morphology; taxonomy; ultrastructure Strain(s): 2867 PubMed: 27020363 DOI: 10.1111/j.1529-8817.2011.01059.x |
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Fawley, M. W.
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Disjunct distribution of the xanthophyll loroxanthin in the green algae (Chlorophyta).
J. Phycol.,
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Keywords: carotenoids; Chlorophyta; high-performance liquid chromatography; loroxanthin; xanthophylls Strain(s): 2285 DOI: 10.1111/j.0022-3646.1991.00544.x |
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Sequence of the Gonium pectorale mating locus reveals a complex and dynamic history of changes in volvocine algal mating haplotypes.
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Additional analysis of cyanobacterial polyamines ─ Distributions of spermidine, homospermidine, spermine, and thermospermine within the phylum Cyanobacteria. ─
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Polyamine distribution profiles in unicellular and multicellular red algae (phylum Rhodophyta) —Detection of 1,6-diaminohexane, aminobutylcadaverine, canavalmine and aminopropylcanavalmine.—
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Keywords: aminobutylcadaverine; aminopropylcanavalmine; canavalmine; diaminohexane; polyamine; red algae; Rhodophyta Strain(s): 551, 1032, 1572, 1957, 2138, 2140, 2636, 2662, 2742 |
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Cellular polyamine profiles in cyanobacteria.
Microbiol. Cult. Coll.,
24,
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Keywords: cyanobacteria; homospermidine; polyamine; spermine; thermospermine Strain(s): 26, 33, 36, 46, 206, 208, 230, 267, 268, 305, 361, 416, 433, 434, 481, 507, 597, 598, 931, 932, 1031, 2115, 2133, 2135 |
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Polyamines of unicellular thermoacidophilic red alga Cyanidium caldarium.
Phytochemistry,
29,
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Keywords: Cyanidium caldarium; Rhodophyta; red algae; polyamines; chemotaxonomy Strain(s): 250, 2137, 3891 DOI: 10.1016/0031-9422(90)85082-Q |
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Occurrence of syn-homospermidine as the major polyamine in nitrogen-fixing cyanobacteria.
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Cellular polyamines of lower eukaryotes belonging to the phyla Glaucophyta, Rhodophyta, Cryptophyta, Haptophyta and Percolozoa.
J. Gen. Appl. Microbiol.,
52,
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Keywords: Cryptophyta; Glaucophyta; Haptophyta; Perclozoa; polyamine; Rhodophyta Strain(s): 8, 274, 276, 277, 282, 353, 388, 699, 706, 715, 741, 763, 764, 1016, 1017, 1032, 1036, 1332, 1441, 1456, 1457, 1462, 1463, 1467, 1473, 3377 PubMed: 17116972 DOI: 10.2323/jgam.52.235 |
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Occurrence of homospermidine and thermospermine as a cellular polyamine in unicellular chlorophyte and multicellular charophyte green algae
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Keywords: green alga; homospermidine; polyamine; thermospermine Strain(s): 18, 151, 160, 255, 296, 306, 360, 363, 640, 722, 836, 1409, 1410, 1411, 1419, 1837, 2164, 2199, 3374 PubMed: 24005181 DOI: 10.2323/jgam.59.313 |
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Cellular polyamine profile of the phyla Dinophyta, Apicomplexa, Ciliophora, Euglenozoa, Cercozoa and Heterokonta.
J. Gen. Appl. Microbiol.,
50,
297-303.
Keywords: Apicomlexa; Cercozoa; Ciliophora; Dinophyta; Euglenozoa; Heterokonta; norspermidine; polyamine Strain(s): 12, 286, 304, 331, 381, 387, 463 PubMed: 15747233 DOI: 10.2323/jgam.50.297 |
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A novel approach to enhance astaxanthin production in Haematococcus lacustris using a microstructure-based culture platform.
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Keywords: Haematococcus lacustris; Microfabricated structure; Astaxanthin; ROS; Mechanical stimulation Strain(s): 144 DOI: 10.1016/j.algal.2019.101464 |
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Astaxanthin biosynthesis promotion with pH shock in the green microalga, Haematococcus lacustris.
Bioresour. Technol.,
314,
123725 (article ID).
Keywords: Haematococcus lacustris; Astaxanthin; pH shock; Biological change; Mass culture Strain(s): 144 PubMed: 32615445 DOI: 10.1016/j.biortech.2020.123725 |
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Reconsideration of the taxonomy of ellipsoidal species of Chlorella (Trebouxiophyceae, Chlorophyta), with establishment of Watanabea gen. nov.
Phycol. Res.,
46,
221-229.
Keywords: Chlorella saccharophila; ellipsoidal species of Chlorella; pyrenoid-lacking Chlorella-like algae: Watanabea gen. et sp. nov. Strain(s): 2189 DOI: 10.1111/j.1440-1835.1998.tb00117.x |
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Interrelations between Microcystis and Cladocera in the highly eutrophic Lake Kasumigaura, Japan.
Int. Revue ges. Hydrobiol.,
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Keywords: Microcystis; Cladocera; toxicity; food chain; Lake Kasumigaura Strain(s): 44, 298, 299 DOI: 10.1002/iroh.19910760104 |
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Handa, S., Nakahara, M., Tsubota, H., Deguchi, H., Nakano, T.
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A new aerial alga, Stichococcus ampulliformis sp. nov. (Trebouxiophyceae, Chlorophyta) from Japan.
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Keywords: aerial algae; molecular phylogeny; Stichococcus ampulliformis sp. nov.; Trebouxiophyceae; 18SrRNA gene Strain(s): 996 DOI: 10.1046/j.1440-1835.2003.00311.x |
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Enhanced lipid productivity of Chlamydomonas reinhardtii with combination of NaCl and CaCl2 stresses.
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Metabolomics-based approach to explore growth phase-dependent markers in cultured diatom Chaetoceros tenuissimus.
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On the rediscovery of Volvox perglobator (Volvocales, Chlorophyceae) and the evolution of outcrossing from self-fertilization.
Evol. Ecol. Res.,
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Keywords: homothallism; phylogenetics; reversion; self-fertilization; sexual reproduction; volvocine green algae Strain(s): 289, 421, 456, 458, 460, 474, 522, 541, 543, 544, 545, 564, 566, 568, 569, 571, 572, 574, 578, 582, 653, 732, 751, 851, 856, 872, 876, 877, 878, 880, 882, 1038, 1122, 1140, 1148, 1156, 1157, 1362, 1708, 1711, 1713, 1859, 2457, 2569, 2738, 3382, 3388, 3780, 3782, 3986 |
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Hanschen, E. R., Ferris, P. J., Michod, R. E.
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Early evolution of the genetic basis for soma in the Volvocaceae.
Evolution,
68,
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Keywords: Gene duplication; germ-soma differentiation; major transitions; multicellularity; regA; Volvox Strain(s): 2739 PubMed: 4689915 DOI: 10.1111/evo.12416 |
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Hanschen, E. R., Herron, M. D., Wiens, J. J., Nozaki, H., Michod, R. E.
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Multicellularity drives the evolution of sexual traits.
Am. Nat.,
192,
E93-E10.
Keywords: sex; volvocine green algae; multicellularity; ancestral state; reconstruction; anisogamy; sexual dimorphism Strain(s): 289, 418, 421, 456, 458, 460, 522, 541, 543, 544, 545, 564, 566, 568, 569, 571, 572, 574, 578, 582, 653, 732, 751, 851, 856, 857, 872, 875, 876, 877, 878, 880, 882, 883, 891, 892, 1038, 1362, 1711, 1713, 2457, 2569, 2738, 3382, 3388, 3780, 3782 PubMed: 30125231 DOI: 10.1086/698301 |
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Hanschen, E. R., Herron, M. D., Wiens, J. J., Nozaki, H., Michod, R. E.
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Repeated evolution and reversibilityof self-fertilization in the volvocinegreen algae.
Evolution,
72,
386-398.
Keywords: Haploid; phylogenetics; self-fertilization; sex; sexual reproduction; volvocine green algae Strain(s): 289, 418, 456, 458, 460, 541, 543, 544, 545, 564, 566, 568, 569, 571, 572, 574, 578, 582, 653, 732, 851, 856, 857, 872, 875, 876, 877, 878, 880, 882, 883, 891, 892, 1038, 1362, 1711, 1713, 2457, 2569, 2738, 3382, 3388, 3780, 3782 PubMed: 29134623 DOI: 10.1111/evo.13394 |
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The Gonium pectorale genome demonstrates co-option of cell cycle regulation during the evolution of multicellularity.
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Hara, Y.
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Chattonella ovata Y. Hara et Chihara mss.
In Red Tide Organisms in Japan - An Illustrated Taxonomic Guide, Eds. by Fukuyo, Y., Takano, H., Chihara, M. & Matsuoka, K., Uchida Rokakuho, Tokyo,
pp. 340-341 (in Japanese with English summary).
Strain(s): 603 |
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Hara, Y., Chihara, M.
1982
Ultrastructure and taxonomy of Chattonella (Class Raphidophyceae) in Japan.
Jpn. J. Phycol. (Sôrui),
30,
47-56 (in Japanese with English summary).
Keywords: Chattonella; Chattonella marina comb. nov.; Raphidophyceae; red tides; taxonomy; ultrastructure Strain(s): 161 |
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Hara, Y., Doi, K., Chihara, M.
1994
Four new species of Chattonella (Raphidophyceae, Chromophyta) from Japan.
Jpn. J. Phycol. (Sôrui),
42,
407-420.
Keywords: Chattonella; C. globosa; C. minima; C. ovata; C. verruculosa; Raphidophyceae; red tide organisms; taxonomy Strain(s): 118, 161, 603, 670, 849 |
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Hara, Y., Inouye, I., Chihara, M.
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Morphology and ultrastructure of Olisthodiscus luteus (Raphidophyceae) with special reference to the taxonomy.
Bot. Mag. Tokyo,
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Keywords: Heterosigma; Olisthodiscus luteus; Raphidophyceae; red tide flagellate; taxonomy of Olisthodiscus; ultrastructure of Olisthodiscus Strain(s): 15 DOI: 10.1007/BF02488775 |
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Blue color formation of cyanobacteria with b-cyclocitral.
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Harada, R., Hirakawa, Y., Yabuki, A., Kashiyama, Y., Maruyama, M., Onuma, R., Soukal, P., Miyagishima, S., Hampl, V., Tanifuji, G., Inagaki, Y.
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Inventory and evolution of mitochondrion-localized family a DNA polymerases in Euglenozoa.
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257 (article ID).
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Evolution of bioconvection patterns in a culture of motile flagellates.
Phys. Fluids,
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Strain(s): 6 DOI: 10.1063/1.866812 |
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Quantitative PCR method for enumeration of cells of cryptic species of the toxic marine dinoflagellate Ostreopsis spp. in Coastal Waters of Japan.
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Molecular response of the bloom-forming cyanobacterium, Microcystis aeruginosa, to phosphorus Limitation.
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An additional note on the nature of sulfur-containing peptide nucleotide complex obtained from Chlorella and yeast.
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Hase, E., Mihara, S., Otsuka, H., Tamiya, H.
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Sulfur-containing peptide-nucleotide complex isolated from Chlorella and yeast cells.
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Hase, E., Mihara, S., Tamiya, H.
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Role of sulfur in the cell division of Chlorella with special reference to the sulfur compounds appearing during the process of cell division. I.
Plant Cell Physiol.,
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Hase, E., Mihara, S., Tamiya, H.
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Some data on the nature of sulfur-containing peptide-nucleotide compounds obtained from Chlorella cells at different developmental stages in their life cycle.
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Hase, E., Mihara, S., Tamiya, H.
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Sulfur-containing deoxypentose polynucleotides obtained from Chlorella cells.
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Hase, E., Mihara, S., Tamiya, H.
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Capabilities of various sulfur substances in inducing the cell division of Chlorella arrested by sulfur deficiency.
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Hase, E., Mihara, S., Tamiya, H.
1961
Role of sulfur in the cell division of Chlorella with special reference to the sulfur compounds appearing during the process of cell division. II.
Plant Cell Physiol.,
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Hase, E., Miyachi, S., Mihara, S.
1963
A preliminary note on the phosphorus compounds in chloroplast and volutin granules isolated from Chlorella cells.
Plant Cell Physiol.,
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Strain(s): 2170 |
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Hase, E., Morimura, Y., Mihara, S., Tamiya, H.
1958
The role of sulfur in the cell division of Chlorella.
Arch. Mikrobiol.,
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Hase, E., Morimura, Y., Tamiya, H.
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Some data on the growth physiology of Chlorella studied by the technique of synchronous culture.
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Hase, E., Moriyama, Y., Tamiya, H.
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A short remark on the role of sulfur in the cell division of Chlorella.
J. Gen. Appl. Microbiol.,
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Hase, E., Otsuka, H., Mihara, S., Tamiya, H.
1959
Role of sulfur in the cell division of Chlorella, studied by the technique of synchronous culture.
Biochim. Biophys. Acta,
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180-189.
Strain(s): 2170 PubMed: 13851937 DOI: 10.1016/0006-3002(59)90346-4 |
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Detection of iron(III)-binding ligands originating from marine phytoplankton using cathodic stripping voltammetry.
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Effect of biodegradable chelating ligands on Fe uptake in and growth of marine microalgae.
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Hasegawa, M., Nishizawa, A., Tsuji, K., Kimura, S., Harada, K.
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Volatile organic compounds derived from 2-keto-acid decarboxylase in Microcystis aeruginosa.
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Hasegawa, M., Yoshida, T., Yabuta, M., Terazima, M., Kumazaki, S.
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Anti-Stokes fluorescence spectra of chloroplasts in Parachlorella kessleri and maize at room temperature as characterized by near-infrared continuous-wave laser fluorescence microscopy and absorption microscopy.
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Hashimoto, H., Murakami, S.
1982
Changes in morphology and ultrastructure of chloroplast along its division cycle in Euglena gracilis cultured synchronously under photoautotrophic condition.
Scientific Papers of the College of General Education, Univ. of Tokyo,
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55-64.
Strain(s): 48 |
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Hashimoto, H., Murakami, S.
1982
Chloroplast replication and loss of chloroplast DNA induced by nalidixic acid in Euglena gracilis.
Cell Struct. Funct.,
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Hashimoto, H., Murakami, S.
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Effects of cycloheximide and chloramphenicol on chloroplast replication in synchronously dividing cultured cells of Euglena gracilis.
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Hashizume, M., Yoshida, M., Demura, M., Watanabe, M. M.
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Culture study on utilization of phosphite by green microalgae.
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Keywords: Phosphite utilization; Chlorella vulgaris; Coccomyxa subellipsoidea Strain(s): 2166, 2170, 2280 DOI: 10.1007/s10811-020-02088-2 |
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Hasunuma, T., Kikuyama, F., Matsuda, M., Aikawa, S., Izumi, Y., Kondo, A.
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Dynamic metabolic profiling of cyanobacterial glycogen biosynthesis under conditions of nitrate depletion.
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Hata, N., Ogbonna, J. C., Hasegawa, Y., Taroda, H., Tanaka, H.
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Production of astaxanthin by Haematococcus pluvialis in a sequential heterotrophic-photoautotrophic culture.
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Hatakeyama, S., Fukushima, S., Kasai, F., Shiraishi, H.
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Assessment of herbicide effects on algal production in the Kokai River (Japan) using a model stream and Selenastrum bioassay.
Ecotoxicology,
3,
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Keywords: herbicides; effects; algal production; algal community; channel carrying river water; bioassay; pesticide analysis Strain(s): 35 |
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Hatano, S.
1978
Studies on frost hardiness in Chlorella ellipsoidea: Effects of antimetabolites, surfactants, hormones, and sugars on the hardening process in the light and dark.
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Strain(s): 2170 |
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Hatano, S., Akashi, H., Nogata, Y., Yoshimoto, M.
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Fatty acid synthetase system in relation to frost hardiness in Chlorella ellipsoidea.
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Strain(s): 2170 |
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Hatano, S., Hara, Y., Takahashi, M.
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Preliminary study on the effects of photoperiod and nutrients on the vertical migratory behavior of a red tide flagellate, Heterosigma akashiwo. Jpn.
Jpn. J. Phycol. (Sôrui),
31,
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Keywords: Heterosigma akashiwo; nutrients; photoperiod; vertical migration Strain(s): 6 |
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Hatano, S., Joh, T., Miyamoto, T., Yoshimoto, M.
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Preparation of protoplasts from Chlorella ellipsoidea C-27.
Plant Cell Physiol.,
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Keywords: cell wall-lytic enzyme; chitosanase; Chlorella ellipsoidea C-27; protoplast Strain(s): 2170 DOI: 10.1093/oxfordjournals.pcp.a078301 |
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Hatano, S., Kabata, K.
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Transition of lipid metabolksm in relation to frost hardiness in Chlorella ellipsoidea.
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Hatano, S., Kabata, K., Sadakane, H.
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Transition of lipid synthesis from chloroplasts to a cytoplasmic system during hardening in Chlorella ellipsoidea.
Plant Physiol.,
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Hatano, S., Kabata, K., Yoshimoto, M., Sadakane, H.
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Accumulation of free fatty acid during hardening of Chlorella ellipsoidea.
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Hatano, S., Sadakane, H., Tutumi, M., Watanabe, T.
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Studies on frost hardiness in Chlorella ellipsoidea. I. Development of frost hardiness of Chlorella ellipsoidea in cynchronous culture.
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Hatano, S., Sadakane, H., Tutumi, M., Watanabe, T.
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Studies on frost hardiness in Chlorella ellipsoidea. II. Effects of inhibitors of RNA and protein synthesis and surfactants on the process of hardening.
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Hattori, A.
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Studies on the metabolism of urea and other nitrogenous compounds in Chlorella ellipsoidea.
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Hattori, A., Fujita, Y.
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Crystalline phycobilin chromoproteids obtained from a blue-green alga, Tolypothrix tenuis.
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J. Biochem.,
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1959
Formation of phycobilin pigments in a blue-green alga, Tolypothrix tenuis, as induced by illumination with colored lights.
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Morphology, molecular phylogeny and taxonomy of Gonium maiaprilis sp. nov. (Goniaceae, Chlorophyta) from Japan.
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Construction of river model biofilm for assessing pesticide effects.
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Optimization of seawater-based triacylglycerol accumulation in a freshwater green alga, Chlorella kessleri, through simultaneous imposition of loweredtemperature and enhanced-light intensity.
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Characterization of a Chlorophyta microalga isolated from a microbial mat in Salar de Atacama (northern Chile) as a potential source of compounds for biotechnological applications.
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Keywords: Altiplane; Chlorella sorokiniana; extreme tolerant; microalgae; microbial mat; oleaginous strain, polyunsaturated; fatty acid; stearic acid Strain(s): 2173 DOI: 10.1111/pre.12176 |
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1997
A deviant mitochondrial genetic code in prymnesiophytes (yellow-algae): UGA codon for tryptophan.
Curr. Genet.,
32,
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Keywords: Prymnesiophyta; deviant genetic code; cytochrome c oxidase subunit I; the codon-capture theory Strain(s): 8, 353, 388 PubMed: 9342410 DOI: 10.1007/s002940050280 |
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1996
UAG is a sense codon in several chlorophycean mitochondria.
Curr. Genet.,
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Streptomyces neyagawaensis as a control for the hazardous biomass of Microcystis aeruginosa (Cyanobacteria) in eutrophic freshwaters.
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Electrophoretic karyotyping and chromosomal gene mapping of Chlorella.
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Keywords: Cell wall; Chlorella variabilis; GlycosaminoglycansParamecium bursaria; Symbiosis Strain(s): 3374 PubMed: 30286318 DOI: 10.1016/j.ejop.2018.09.003 |
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Inner ear development in cyclostomes and evolution of the vertebrate semicircular canals.
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Identification of antioxidant genes in the ostracod Heterocypris incongruens through de novo transcriptome sequencing.
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An examination of algal bioassay method for agricultural chemicals and heavy metals in a water environment.
Hokkaido Kankyô Kagaku Kenkyû Sentâ Syohô,
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Strain(s): 228, 229 |
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The primitive rhodophyte Cyanidioschyzon merolae contains a semiamylopectin-type, but not an amylose-type, α-glucan.
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Isolation of high molecular weight cellular DNA with a novel granulated hydroxyapatite.
Agric. Biol. Chem.,
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Unique repetitive sequences of 170 bp in Chlorella.
Plant Mol. Biol.,
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γ-ｌinolenic acid production by microalgae.
Appl. Biochem. Biotechnol.,
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Keywords: g-linolenic acid; Spirulina platensis; green algae; lipid; marine microalgae Strain(s): 39 DOI: 10.1007/BF02920244 |
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A receptor-like kinase, related to cell wall sensor of higher plants, is required for sexual reproduction in the unicellular charophycean alga, Closterium peracerosum-strigosum-littorale complex.
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Ecotoxicity testing of bioremediation agents for shoreline oil-spill clean up.
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Draft genome sequences of four species of Chlamydomonas containing phosphatidylcholine.
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Evolution of the phosphatidylcholine biosynthesis pathways in green algae: Combinatorial diversity of methyltransferases.
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Hirata, K., Phunchindawan, M., Tukamoto, J., Goda, S., Miyamoto, K.
1996
Cryopreservation of microalgae using encapsulation-dehydration.
CryoLetters,
17,
321-328.
Keywords: Dunaliella tertiolecta; microalgae; cryopreservation; encapsulation-dehydration Strain(s): 8, 19, 22, 24, 27, 32, 44, 242, 375, 396, 422, 437 |
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Hirato, Y., Goto, M., Tokuhisa, M., Tanigawa, M., Nishimura, K.
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Crystallization and X-ray analysis of D-threonine aldolase from Chlamydomonas reinhardtii.
Acta Crystallogr. F-Struct. Biol.,
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Keywords: D-threonine aldolase; Chlamydomonas reinhardtii; D-amino acids; crystallization Strain(s): 2237 PubMed: 28177318 DOI: 10.1107/S2053230X1602063X |
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Hirato, Y., Tokuhisa, M., Tanigawa, M., Ashida, H., Tanaka, H., Nishimura, K.
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Cloning and characterization of d-threonine aldolase from the green alga Chlamydomonas reinhardtii.
Phytochemistry,
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Keywords: Chlamydomonas reinhardtii; Chlamydomonadaceae; Green alga; Enzyme characterization; d-Amino acid; d-Threonine aldolase; Pyridoxal 5’-phosphate Strain(s): 2237 PubMed: 28038776 DOI: 10.1016/j.phytochem.2016.12.012 |
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Identification of Heterocapsa circularisquama by means of antibody.
Fish. Sci.,
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Keywords: identification; Heterocapsa; dinoflagellate; antibody Strain(s): 7, 235, 472, 473 DOI: 10.2331/fishsci.68.sup1_627 |
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Hiroishi, S., Uchida, A., Nagasaki, K., Ishida, Y.
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A new method for identification of inter- and intra-species of the red tide algae Chattonella antiqua and Chattonella marina (Raphidophyceae) by means of monoclonal antibodies.
J. Phycol.,
24,
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Keywords: Chattonella; identification; immunofluorescence; inter-species; intra-species; method; monoclonal antibody; red tide Strain(s): 1, 2, 14, 83, 84, 85, 86, 113, 114, 115, 116, 118, 121 DOI: 10.1111/j.1529-8817.1988.tb04488.x |
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1989
A new method for inter- and intra-species identification of red tide algae Chattonella antiqua and Chattonella marina by means of monoclonal antibodies.
In Red Tides: Biology, Environmental Science, and Toxicology, Eds. by Okaichi, T., Anderson, D. M. & Nemoto, T., Elsevier Science Pub., New York,
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Strain(s): 85, 86, 118, 121 |
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Hirokawa, T., Hata, M., Takeda, H.
1982
Correlation between the starch level and the rate of starch synthesis during the developmental cycle of Chlorella ellipsoidea.
Plant Cell Physiol.,
23,
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Keywords: 14C-fixation; cell cycle; Chlorella ellipsoidea; photosynthesis; starch accumulation; starch synthesis; synchronous culture Strain(s): 2170 |
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Hirokawa, T., Miyachi, S., Tamiya, H.
1958
Effect of hydrogen peroxide on the light-induced capacity of carbon dioxide-fixation in green algae.
J. Biochem.,
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Hirokawa, T., Takeda, H.
1980
Automatic analysing system for the liquid chromatography.
J. Gen. Edu. Dept., Niigata Univ.,
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Hiroki, M., Shimizu, A., Li, R., Watanabe, M., Watanabe, M. M.
1998
Development of a database system useful for identification of Anabaena spp. (Cyanobacteria).
Phycol. Res.,
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Keywords: Anabaena; computer; cyanobacteria; database system; identification; morphology Strain(s): 810, 819, 826, 835 DOI: 10.1111/j.1440-1835.1998.tb00276.x |
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Hirooka, S., Hirose, Y., Kanesaki, Y., Higuchi, S., Fujiwara, T., Onuma, R., Era, A., Ohbayashi, R., Uzuka, A., Nozaki, H., Yoshikawa, H., Miyagishima, SY.
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Acidophilic green algal genome provides insights into adaptation to an acidic environment.
Proc. Natl. Acad. Sci. U. S. A.,
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Efficient open cultivation of cyanidialean red algae in acidified seawater.
Sci Rep,
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Hirooka, T., Akiyama, Y., Tsuji, N., Nakamura, T., Nagase, H., Hirata, K., Miyamoto, K.
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Removal of hazardous phenols by microalgae under photoautotrophic conditions.
J. Biosci. Bioeng.,
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Keywords: green algae; cyanobacteria; nitrophenol; chlorophenol; bisphenol A; photoautotrophic conditions Strain(s): 19, 23, 44, 422, 437 PubMed: 16233393 DOI: 10.1016/S1389-1723(03)80130-5 |
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Near-UV and blue light effects in cyanobacteria.
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Hirose, M., Reimer, J. D., Hidaka, M., Suda, S.
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Phylogenetic analyses of potentially free-living Symbiodinium spp. Isolated from coral reef sand in Okinawa, Japan.
Mar. Biol.,
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Strain(s): 2638, 2639, 2640, 2641, 2642, 2643 DOI: 10.1007/s00227-008-1011-2 |
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Hirose, Y., Fujisawa, T., Ohtsubo, Y., Katayama, M., Misawa, N., Wakazuki, S., Shimura, Y., Nakamura, Y., Kawachi, M., Yoshikawa, H., Eki, T., Kanesaki, Y.
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Complete genome sequence of cyanobacterium Fischerella sp. NIES-3754, providing thermoresistant optogenetic tools.
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Keywords: Cyanobacteria; Genome; Photosensor; Thermophile Strain(s): 3754 PubMed: 26784989 DOI: 10.1016/j.jbiotec.2016.01.011 |
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Hirose, Y., Fujisawa, T., Ohtsubo, Y., Katayama, M., Misawa, N., Wakazuki, S., Shimura, Y., Nakamura, Y., Kawachi, M., Yoshikawa, H., Eki, T., Kanesaki, Y.
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Complete genome sequence of cyanobacterium Leptolyngbya sp. NIES-3755.
GenomeA,
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Hirose, Y., Fujisawa, T., Ohtsubo, Y., Katayama, M., Misawa, N., Wakazuki, S., Shimura, Y., Nakamura, Y., Kawachi, M., Yoshikawa, H., Eki, T., Kanesaki, Y.
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Complete genome sequence of cyanobacterium Nostoc sp. NIES-3756, a potentially useful strain for phytochrome-based bioengineering.
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Hirose, Y., Katayama, M., Ohtsubo, Y., Misawa, N., Iioka, E., Suda, W., Oshima, K., Hanaoka, M., Tanaka, K., Eki, T., Ikeuchi, M., Kikuchi, Y., Ishida, M., Hattori, M.
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Complete genome sequence of cyanobacterium Geminocystis sp. strain NIES-3708, which performs type II complementary chromatic acclimation.
GenomeA,
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Strain(s): 3708 PubMed: 25953174 DOI: 10.1128/genomeA.00357-15 |
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Hirose, Y., Katayama, M., Ohtsubo, Y., Misawa, N., Iioka, E., Suda, W., Oshima, K., Hanaoka, M., Tanaka, K., Eki, T., Ikeuchi, M., Kikuchi, Y., Ishida, M., Hattori, M.
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Complete genome sequence of cyanobacterium Geminocystis sp. strain NIES-3709, which harbors a phycoerythrin-rich phycobilisome.
GenomeA,
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Strain(s): 3709 PubMed: 25931605 DOI: 10.1128/genomeA.00385-15 |
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Characterization of the genuine type 2 chromatic acclimation in the two Geminocystis cyanobacteria.
DNA Res.,
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Keywords: Cyanobacteria; chromatic acclimation; phycobilisome; cyanobacteriochrome Strain(s): 3708, 3709 PubMed: 28338901 DOI: 10.1093/dnares/dsx011 |
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Hiwatari, T., Kasai, F., Watanabe, M. M., Nei, T.
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Cryopreservation of Scenedesmus acutus and Pediastrum duplex in liquid nitrogen - Survival and growth after freezing.
Jpn. J. Freez. Dry.,
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Detection and identification of potentially toxic cyanobacteria: Ubiquitous distribution of Microcystis aeruginosa and Cuspidothrix issatschenkoi in Japanese lakes.
Harmful Algae,
16,
49-57.
Keywords: Anatoxin-a; Automated rRNA intergenic spacer analysis (ARISA); Cuspidothrix issatschenkoi; Cyanotoxin; Microcystin; Microcystis aeruginosa Strain(s): 30, 40, 77, 102, 111, 230, 512, 843, 905, 928, 932, 937, 991, 1645, 1669, 1698, 1729, 1950, 2116 DOI: 10.1016/j.hal.2012.01.003 |
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Temporal variation in cyanobacteria species composition and photosynthetic activity in experimentally induced blooms.
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Keywords: cyanobacterial bloom; DCMU [3'-(3,4-dichlorophenyl)-1',1'-dimethyl urea]; maximum quantum yieldMicrocystis aeruginosa Strain(s): 843 DOI: 10.1093/plankt/fbr040 |
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Pitfalls of establishing DNA barcoding systems in protists: the cryptophyceae as a test case.
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Hoef-Emden, K.
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Osmotolerance in the Cryptophyceae: Jacks-of-all-trades in the Chroomonas clade.
Protist,
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Keywords: Chroomonas; contractile vacuole; cryptomonads; floridoside; osmolarity; osmoregulation; osmotolerance; phylogeny Strain(s): 708, 712, 713, 714, 1004 PubMed: 24568876 DOI: 10.1016/j.protis.2014.01.001 |
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Hoef-Emden, K.
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Revision of the genus Chroomonas HANSGIRG: The benefits of DNA-containing specimens.
Protist,
169,
662-681.
Keywords: Chroomonas; novel species; phylogeny; ancient DNA; revision; Cryptophyceae Strain(s): 708, 712, 1004 PubMed: 30125802 DOI: 10.1016/j.protis.2018.04.005 |
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Hoef-Emden, K., Melkonian, M.
2003
Revision of the genus Cryptomonas (Cryptophyceae): a combination of molecular phylogeny and morphology provides insights into a long-hidden dimorphism.
Protist,
154,
371-409.
Strain(s): 274, 276, 279 PubMed: 14658496 DOI: 10.1078/143446103322454130 |
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Hogetsu, D., Miyachi, S.
1970
Effect of oxygen on the light-enhanced dark carbon dioxide fixation in Chlorella cells.
Plant Physiol.,
45,
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Strain(s): 2170 PubMed: 16657299 DOI: 10.1104/pp.45.2.178 |
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Hogetsu, D., Miyachi, S.
1977
Effects of CO2 concentration during growth on subsequent photosynthetic CO2 fixation.
Plant Cell Physiol.,
18,
347-352.
Strain(s): 2160 |
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Hogetsu, D., Miyachi, S.
1979
Role of carbonic anhydrase in photosynthetic CO2 fixation in Chlorella.
Plant Cell Physiol.,
20,
747-756.
Keywords: carbonic anhydrase; Chlorella; CO2 fixation; photosynthesis; ribulose 1,5-bisphosphate carboxylase Strain(s): 2160 DOI: 10.1093/oxfordjournals.pcp.a075865 |
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Honda, D., Yokota, A., Sugiyama, J.
1999
Detection of seven major evolutionary lineages in cyanobacteria based on the 16S rRNA gene sequence analysis with new sequences of five marine Synechococcus strains.
J. Mol. Evol.,
48,
723-739.
Keywords: cyanobacteria; Synechococcus; phylogeny; ribosomal RNA; maximum-likelihood method; neighbor-joining method; rate homo- and heterogeneous models Strain(s): 27, 208, 510, 2116, 2118, 2119 PubMed: 10229577 DOI: 10.1007/PL00006517 |
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Honda, R., Boonnorat, J., Chiemchaisri, C., Chiemchaisri, w., Yamamoto, K.
2012
Carbon dioxide capture and nutrients removal utilizing treated sewage by concentrated microalgae cultivation in a membrane photobioreactor.
Bioresour. Technol.,
125,
59-64.
Keywords: Carbon dioxide capture; Nutrients removal; Membrane photobioreactor; Microalgae; Botryococcus braunii Strain(s): 2199 PubMed: 23023237 DOI: 10.1016/j.biortech.2012.08.138 |
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Honda, R., Rukapan, W., Komura, H., Teraoka, Y., Noguchi, M., Hoek, E.M.V.
2015
Effects of membrane orientation on fouling characteristics of forward osmosis membrane in concentration of microalgae culture.
Bioresour. Technol.,
197,
429-433.
Keywords: Forward osmosis; Microalgae; Membrane fouling; Extracellular polymeric substances (EPS) Strain(s): 2170 PubMed: 26356114 DOI: 10.1016/j.biortech.2015.08.096 |
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Honda, R., Teraokab, Y., Noguchia, M., Yang, S.
2017
Optimization of hydraulic retention time and biomass concentration in microalgae biomass production from treated sewage with a membrane photobioreactor.
J. Water Environ. Technol.,
15,
1-11.
Keywords: membrane photobioreactor; microalgae; resource recovery from wastewater Strain(s): 2170 DOI: 10.2965/jwet.15-085 |
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Yoshida, T., Takashima, Y., Tomaru Y., Shirai, Y., Takao, Y., Hiroishi, S., Nagasaki, K.
2012
A protein binding to an upstream sequence of ftsZ involved in coordination of DNA replication and cell division in Microcystis aeruginosa.
Fish. Sci.,
78,
375-379.
Keywords: Cyanobacteria; Microcystis; Cell division; DNA replication; ftsZ Strain(s): 298 DOI: 10.1007/s12562-011-0442-8 |
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Hondo, S., Takahashi, M., Osanai, T., Matsuda, M., Hasunuma, T., Tazuke, A., Nakahira, Y., Chohnan, S., Hasegawa, M., Asayama, M.
2015
Genetic engineering and metabolite profiling for overproduction of polyhydroxybutyrate in cyanobacteria.
J. Biosci. Bioeng.,
120,
510-517.
Keywords: Acetyl-CoA; Cyanobacteria; Metabolite analysis; Nitrogen depletion; Polyhydroxybutyrate Strain(s): 843 PubMed: 26055446 DOI: 10.1016/j.jbiosc.2015.03.004 |
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Hong, J. W., Kim, O. H., Jo, S. W., Kim, H., Jeong, M. R., Yoon, H. S.
2018
Characterization of alkane-producing Nostoc sp. isolated from a summer bloom for biofuel potential.
J. Biobased Mater. Bioenergy,
12,
244-251.
Keywords: Alkane-Producing Genes; Biofuel; Cyanobacteria; Heptadecane; Potential; Feedstoc Strain(s): 21, 2109 DOI: 10.1166/jbmb.2018.1757 |
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Hong, M. E., Choi, S. P., Park, Y. I., Kim, Y. K., Chang, W. S., Kim, B. W., Sim, S. J.
2012
Astaxanthin production by a highly photosensitive Haematococcus mutant.
Process Biochem.,
47,
1972–1979.
Keywords: Haematococcus pluvialis; Astaxanthin; Photo-inducible mutant; Photo-sensitivity Strain(s): 144 DOI: 10.1016/j.procbio.2012.07.007 |
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Hong, M. E.1, Choi, H. I., Kwak, H. S., Hwang, S. W., Sung, Y. J., Chang, W. S., Sim, S. J.
2018
Rapid selection of astaxanthin-hyperproducing Haematococcus mutant via azide-based colorimetric assay combined with oil-based astaxanthin extraction.
Bioresour. Technol.,
267,
175-181.
Keywords: Haematococcus pluvialis; Autotrophic astaxanthin production; High-throughput screening; Azide-based colorimetric assay; Oil-based astaxanthin extraction method Strain(s): 144 PubMed: 30014996 DOI: 10.1016/j.biortech.2018.07.033 |
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Hong, M.-E., Choi, Y. Y., Sim, S. J.
2016
Effect of red cyst cell inoculation and iron (II) supplementation on autotrophic astaxanthin production by Haematococcus pluvialis under outdoor summer conditions.
J. Biotechnol.,
218,
25–33.
Keywords: Haematococcus pluvialis; Photoautotrophic culture; Astaxanthin; Summer outdoor conditions; Red cyst cell (aplanospore) inoculation method; Iron(Fe2+) supplementation method Strain(s): 144 PubMed: 26630998 DOI: 10.1016/j.jbiotec.2015.11.019 |
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Honjo, M., Matsui, K., Ueki, M., Nakamura, R., Fuhrman, J. A., Kawabata, Z.
2006
Diversity of virus-like agents killing Microcystis aeruginosa in a hyper-eutrophic pond.
J. Plankton Res.,
28,
407-412.
Strain(s): 298 DOI: 10.1093/plankt/fbi128 |
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Hoppenrath, M., Yubuki, N., Stern, R., Leander, B. S.
2017
Ultrastructure and molecular phylogenetic position of a new marine sand-dwellin dinoflagellate from British Columbia, Canada: Pseudadenoides polypyrenoides sp. nov. (Dinophyceae).
Eur. J. Phycol.,
52,
208-224.
Keywords: Clone libraries; depth gradient; microscopy; NGS library; oxyphotobacteriav; stromatolites; taxonomy Strain(s): 1367 DOI: 10.1080/09670262.2016.1274788 |
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Hori, K. Maruyama, F., Fujisawa, T., Togashi, T., Yamamoto, N., Seo, M., Sato, S., Yamada, T., Mori, H., Tajima, N., Moriyama, T., Ikeuchi, M., Watanabe, M., Wada, H., Kobayashi, K., Saito, M., Masuda, T., Sasaki-Sekimoto, Y., Mashiguchi, K., Awai, K., Shimojima, M., Masuda, S., Iwai, M., Nobusawa, T., Narise, T., Kondo, S., Saito, H., Sato, R., Murakawa, M., Ihara, Y., Oshima-Yamada, Y., Ohtaka, K., Satoh, M., Sonobe, K., Ishii, M., Ohtani, R., Kanamori-Sato, M., Honoki, R., Miyazaki, D., Mochizuki, H., Umetsu, J., Higashi, K., Shibata, D., Kamiya, Y., Sato, N., Nakamura, Y., Tabata, S., Ida, S., Kurokawa, K., Ohta, H.
2014
Klebsormidium flaccidum genome reveals primary factors for plant terrestrial adaptation.
Nat. Commun.,
5,
3978 (article ID).
Strain(s): 2285 PubMed: 24865297 DOI: 10.1038/ncomms4978 |
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Hori, S., Sekimoto, H., Abe, J.
2012
Properties of cell surface carbohydrates in sexual reproduction of the Closterium peracerosum–strigosum–littorale complex (Zygnematophyceae, Charophyta).
Phycol. Res.,
60,
254-260.
Keywords: cell-cell recognition; Closterium; ConcanavalinA; conjugation; lectin; Lycopersicon esculentum lectin; sexual reproduction Strain(s): 67, 68 DOI: 10.1111/j.1440-1835.2012.00656.x |
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Horiguchi, T.
1996
Haramonas dimorpha gen. et sp. nov. (Raphidophyceae), a new marine raphidophyte from Australian mangrove.
Phycol. Res.,
44,
143-150.
Keywords: Haramonas dimorpha gen et sp. nov.; mangrove; Raphidophyceae; taxonomy; tubular invagination; ultrastructure Strain(s): 716 DOI: 10.1111/j.1440-1835.1996.tb00043.x |
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Hoshina, R., Fujiwara, Y.
2013
Molecular characterization of Chlorella cultures of the National Institute for Environmental Studies culture collection with description of Micractinium inermum sp. nov., Didymogenes sphaerica sp. nov., Didymogenes soliella sp. nov., (Chlorellaceae, Trebouxiophyceae).
Phycol. Res.,
61,
124-132.
Keywords: Chlorella; Didymogenes; group 1 intron; internal transcribed spacer 2; Micractinium; species concept Strain(s): 2167, 2171, 2173, 2330 DOI: 10.1111/pre.12010 |
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Hoshina, R., Hayakawa, M. M., Kobayashi, M., Higuchi, R., Suzaki, T.
2020
Pediludiella daitoensis gen. et sp. nov. (Scenedesmaceae, Chlorophyceae), a large coccoid green alga isolated from a Loxodes ciliate.
Sci Rep,
10,
628 (article ID).
Strain(s): 4031 PubMed: 31959793 DOI: 10.1038/s41598-020-57423-x |
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Hoshina, R., Imamura, N.
2008
Eu-Chlorella large subunit rDNA sequences and group I introns in ribosomal DNA of the paramecian symbiotic alga NC64A.
Phycol. Res.,
56,
21-32.
Keywords: Chlorella vulgaris; group I intron; intron phylogeny; intron transposition; large subunit ribosomal DNA; NC64A Strain(s): 227 DOI: 10.1111/j.1440-1835.2008.00481.x |
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Hoshina, R., Imamura, N.
2009
Phylogenetically close group I introns with different positions among Paramecium bursaria photobionts imply a primitive stage of intron diversification.
Mol. Biol. Evol.,
26,
1309-1319.
Keywords: degenerative homing; intron diversification; intron transposition; Paramecium bursaria symbiotic algae; reverse splicing Strain(s): 2541 PubMed: 19279084 DOI: 10.1093/molbev/msp044 |
|
Hoshina, R., Iwataki, M., Imamura, N.
2010
Chlorella variabilis and Micractinium reisseri sp. nov. (Chlorellaceae, Trebouxiophyceae): Redescription of the endosymbiotic green algae of Paramecium bursaria (Peniculia, Oligohymenophorea) in the 120th year.
Phycol. Res.,
58,
188-201.
Keywords: Chlorella variabilis; ITS2; Micractinium reisseri; Paramecium bursaria; species concept Strain(s): 2540, 2542 DOI: 10.1111/j.1440-1835.2010.00579.x |
|
Hoshina, R., Kamako, S.-I., Imamura, N.
2004
Phylogenetic position of endosymbiotic green algae in Paramecium bursaria Ehrenberg from Japan.
Plant Biol.,
6,
447-453.
Keywords: 18S rDNA; Chlorella; endosymbiont; ITS; Paramecium bursaria; phylogeny Strain(s): 2540, 2541 DOI: 10.1055/s-2004-820888 |
|
Hoshina, R., Kato, Y., Kamako, S., Imamura, N.
2005
Genetic evidence of "American" and "European" type symbiotic algae of Paramecium bursaria Ehrenberg.
Plant Biol.,
7,
526-532.
Keywords: 18S rDNA; "American"; "European"; Chlorella; ITS; Paramecium bursaria; Phylogeny Strain(s): 2540, 2541 DOI: 10.1055/s-2005-865912 |
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Hoshina, R., Kobayashi, M., Suzaki, T., Kusuoka, Y.
2018
Brandtia ciliaticola gen. et sp. nov. (Chlorellaceae, Trebouxiophyceae) a common symbiotic green coccoid of various ciliate species.
Phycol. Res.,
66,
76-81.
Keywords: Chlorella; genus definition; rRNA structure Strain(s): 4032, 4033, 4034 DOI: 10.1111/pre.12194 |
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Hoshina, R., Tsukii, Y., Harumoto, T., Suzaki, T.
2021
Characterization of a green Stentor with symbiotic algae growing in an extremely oligotrophic environment and storing large amounts of starch granules in its cytoplasm.
Sci Rep,
11,
2865 (article ID).
Strain(s): 3374 PubMed: 33536497 DOI: 10.1038/s41598-021-82416-9 |
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Hosoi-Tanabe, S., Honda, D., Fukaya, S., Otake, I., Inagaki, Y., Sako, Y.
2007
Proposal of Pseudochattonella verruculosa gen. nov., comb. nov. (Dictyochophyceae) for a formar rephidophycean alga Chattonella verruculosa, based on 18S rDNA phylogeny and ultrastructural characteristics.
Phycol. Res.,
55,
185-192.
Keywords: Chatonella verruculosa; Dictyochophyceae; flagellar apparatus; harmful algal bloom; phylogenetic analysis; Pseudochattonella verruculosa; Raphidophyceae Strain(s): 670 DOI: 10.1111/j.1440-1835.2007.00461.x |
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Hosoi-Tanabe, S., Otake, I., Sako, Y.
2006
Phylogenetic analysis of noxious red tide flagellates Chattonella antiqua, C. marina, C. ovata, and C. verruculosa (Raphidophyceae) based on the rRNA gene family.
Fish. Sci.,
72,
1200-1208.
Keywords: Chattonella; genetic homogeneity; phylogenetic analysis; Raphidophyceae; rRNA gene family Strain(s): 1, 5, 86, 121, 558, 559, 603, 670 DOI: 10.1111/j.1444-2906.2006.01277.x |
|
Hosoi-Tanabe, S., Sako, Y.
2005
Species-specific detection and quantification of toxic marine Dinoflagellates Alexandrium tamarense and A. catenella by reai-time PCR assay.
Mar. Biotechnol.,
7,
506-514.
Keywords: toxic dinoflagellate; — Alexandrium; paralytic shellfish poisoning (PSP); real-time PCR; species-specific identification; quantification Strain(s): 1, 7, 12, 293, 331, 559, 603, 670 PubMed: 16007374 DOI: 10.1007/s10126-004-4128-4 |
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Hosokawa, Y., Miki-Noumura, T.
1987
Bending motion of Chlamydomonas axonemes after extrusion of central-pair microtubules.
J. Cell Biol.,
105,
1297-1301.
Strain(s): 2239 |
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Hosomi, M., Sudo, R.
1979
Studies on the effects of sediments on algal growth - Algal growth potential of sediments.
Res. Rep. Natl. Inst. Environ. Stud.,
No. 6,
115-121 (in Japanese with English summary).
Strain(s): 35 |
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Hosoya, R., Hamana, K., Isobe, M., Yokota, A.
2005
Polyamine distribution profiles within Cyanobacteria.
Microbiol. Cult. Coll.,
21,
3-8.
Keywords: cyanobacteria; homospermidine; polyamine; spermidine Strain(s): 19, 21, 22, 28, 30, 34, 37, 41, 44, 45, 50, 73, 78, 79, 80, 81, 204, 208, 510, 512, 515, 592, 593, 610, 843, 846, 847, 2093, 2096, 2098, 2100, 2102, 2107, 2108, 2118, 2119, 2123, 2124, 2125, 2126, 2128, 2129, 2131, 2132, 3259, 3275, 3276, 3277 |
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Houdai, T., Matsuoka, S., Matsumori, N., Murata, M.
2004
Membrane-permeabilizing activities of amphidinol 3, polyene-polyhydroxy antifungal from a marine dinoflagellate.
Biochem. Biophys. Acta,
1667,
91-100.
Keywords: amphidinol; Amphidinium klebsii; amphotericin B Strain(s): 613 PubMed: 15533309 DOI: 10.1016/j.bbamem.2004.09.002 |
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Houdai, T., Matsuoka, S., Morsy, N., Matsumori, N., Satake, M., Murata, M.
2005
Hairpin conformation of amphidinols possibly accounting for potent membrane permeabilizing activities.
Tetrahedron,
61,
2795-2802.
Keywords: amphidinol membrane-permeabilizaion Strain(s): 613 DOI: 10.1016/j.tet.2005.01.069 |
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Houdai, T., Matsuoka, S., Murata, M., Satake, M., Ota, S., Oshima, Y., Rhodes, L. L.
2001
Acetate labeling patterns of dinoflagellate polyketides, amphidinols 2, 3 and 4.
Tetrahedron,
57,
5551-5555.
Keywords: dinoflagellate; polyketides; biosynthesis; amphidinol; Amphidinium; isotopic labelling Strain(s): 613 DOI: 10.1016/S0040-4020(01)00481-1 |
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Houndan, A., Billard, C., Marie, D., Not, F., Sáez, A. G., Young, J. R., Probert, I.
2003
Holococcolithophore-heterococcolithophore (Haptophyta) life cycles: flow cytometric analysis of relative ploidy levels.
Systematics and Biodiversity,
4,
453-465.
Keywords: Coccolithophore; haplo-diploid; Haptophyta; heterococcolith; holococcolith; life cycle; microalgae; ploidy Strain(s): 2694, 2697 DOI: 10.1017/S1477200003001270 |
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Hovde, B. T., Deodato, C. R., Andersen, R. A., Starkenburg, S. R., Barlow, S.B., Cattolico, R.A.
2019
Chrysochromulina: Genomic assessment and taxonomic diagnosis of the type species for an oleaginous algal clade.
Algal Res.,
37,
307-319.
Keywords: Haptophyta; Chrysochromulina genome; nad evolution; FtsZ phylogeny; Meiosis; Taxon diagnosis Strain(s): 562 DOI: 10.1016/j.algal.2018.11.023 |
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Howe, A. T., Bass, D., Vickerman, K., Chao, E. E., Cavalier-Smith, T.
2009
Phylogeny, taxonomy, and astounding genetic diversity of Glissomonadida ord. nov., the dominant gliding zooflagellates in soil (Protozoa: Cercozoa).
Protist,
160,
159-189.
Keywords: Glissomonadida; Sandonidae; Allapsidae; Bodomorphidae; Heteromita; phylogeny Strain(s): 2414, 2415, 2417, 2418, 2419, 2421, 2422, 2423, 2424, 2425, 2426, 2427, 2428, 2429, 2430 PubMed: 19324594 DOI: 10.1016/j.protis.2008.11.007 |
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Htet, AN., Noguchi, M., Ninomiya, K., Tsuge, Y., Kuroda, K., Kajita, S., Masai, E., Katayama, Y., Shikinaka, K., Otsuka, Y., Nakamura, M., Honda, R., Takahashi, K.
2018
Application of microalgae hydrolysate as a fermentation medium for microbial production of 2-pyrone 4,6-dicarboxylic acid.
J. Biosci. Bioeng.,
125,
717-722.
Keywords: Microalgae; Chlorella emersonii; Acid hydrolysis; Fermentation; Escherichia coli; 2-pyrone 4,6-dicarboxylic acid Strain(s): 2151 PubMed: 29395960 DOI: 10.1016/j.jbiosc.2017.12.026 |
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Hu, ZY., Li, YT., Sommerfeld, M., Chen, F., Hu, Q.
2008
Enhanced protection against oxidative stress in an astaxanthin-overproduction Haematococcus mutant (Chlorophyceae).
Eur. J. Phycol.,
43,
365-376.
Keywords: astaxanthin; carotenogenesis; flow cytometry; Haematococcus pluvialis; oxidative stress; pigment mutant Strain(s): 144 DOI: 10.1080/09670260802227736 |
|
Hua, C., Ludsinb, S. A., Martinc, J. F., Dittmannd, E., Lee, J.
2018
Mycosporine-like amino acids (MAAs)—producing Microcystis in Lake Erie:Development of a qPCR assay and insight into its ecology.
Harmful Algae,
77,
1–10.
Keywords: Shinorine; Porphyra; UV irradiation; Sunscreen; Eutrophication; Harmful algal bloom Strain(s): 843 PubMed: 30005796 DOI: 10.1016/j.hal.2018.05.010 |
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Hua, J., Lee, R.W.
2012
Factors affecting codon bias in the mitochondrial genomes of the Streptophyte Mesostigma viride and the Chlorophyte Chlamydomonas reinhardtii.
J. Eucaryot. Microbiol.,
59,
287-289.
Keywords: Green algae; mutation; selection; synonymous codon usage Strain(s): 296 PubMed: 22340021 DOI: 10.1111/j.1550-7408.2011.00613.x |
|
Hua, JM., Smith, D. R., Borza, T., Lee, R. W.
2012
Similar relative mutation rates in the three genetic compartments of Mesostigma and Chlamydomonas.
Protist,
163,
105-115.
Keywords: Chlamydomonas; genome architecture; Mesostigma; mutation rate; silent substitution rate Strain(s): 296, 476 PubMed: 21621456 DOI: 10.1016/j.protis.2011.04.003 |
|
Huang, Y., Lee, H., Lai, C.
2013
Engineering of the growth environment of microalgae with high biomass and lipid productivity.
J. Nanosci. Nanotechnol.,
13,
2117-2121.
Keywords: Microalgae; Cultivation Environment; Carbon Dioxide; Biomass Productivity; Lipid Productivity Strain(s): 2199 DOI: 10.1166/jnn.2013.6877 |
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Huang, Y.-T., Su, C.-P.
2014
High lipid content and productivity of microalgae cultivating under elevated carbon dioxide.
Int. J. Environ. Sci. Technol.,
11,
703-710.
Keywords: Biodiesel; Chlorella; Global warming; Light intensity Strain(s): 2173 DOI: 10.1007/s13762-013-0251-y |
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Huang, Y-T., Lai, C-W., Wu, B-W., Lin, K-S., Wu, J.C.S., Md Shahriar A Hossain, Yamauchi, Y., Wu, C.-W.
2017
Advances in bioconversion of microalgae with high biomass and lipid productivity.
J. Taiwan Inst. Chem. Eng.,
79,
37-42.
Keywords: Bioconversion; Fatty acid; methyl esters; Illumination; Microalgae Strain(s): 2199 DOI: 10.1016/j.jtice.2017.05.026 |
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Hunsperger, H. M., Randhawa, T., Cattolico, R. A.
2015
Extensive horizontal gene transfer, duplication, and loss of chlorophyll synthesis genes in the algae.
BMC Evol. Biol.,
15,
16 (article ID).
Keywords: Chlorophyll synthesis; Horizontal gene transfer; Endosymbiotic gene transfer; Gene duplication; Algae; Protochlorophyllide Strain(s): 293, 360, 484, 1363, 2140 PubMed: 25887237 DOI: 10.1186/s12862-015-0286-4 |
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Huss, V. A. R., Wein, K. H., Kessler, E.
1988
Deoxyribonucleic acid reassociation in the taxonomy of the genus Chlorella.
Arch. Mikrobiol.,
150,
509-511.
Strain(s): 2163 |
|
Hwang, S. W., Choi, H. I., Sim, S. J.
2019
Acidic cultivation of Haematococcus pluvialis for improved astaxanthin production in the presence of a lethal fungus.
Bioresour. Technol.,
278,
138-144.
Keywords: Haematococcus pluvialis; Paraphysoderma sedebokerensis; Acidic cultivation; Stress relief; Astaxant Strain(s): 144 PubMed: 30685617 DOI: 10.1016/j.biortech.2019.01.080 |
|
Ichimura, T.
1971
Sexual cell division and conjugation-papilla formation in sexual reproduction of Closterium strigosum.
In Proceedings of the Seventh International Seaweed Symposium, University of Tokyo Press, Tokyo,
pp. 208-214.
Strain(s): 66, 262 |
|
Ichimura, T.
1973
Culture of microalgae (6).
Iden,
27,
97-101 (in Japanese).
Strain(s): 66, 173, 175, 179, 180, 181, 183, 198, 262, 338, 450 |
|
Ichimura, T.
1973
The life cycle and its control in some species of Closterium, with special reference to the biological species problems.
Thesis D. Sci., University of Tokyo,
69 pp., 11 tables, 40 figs.
Strain(s): 66, 67, 68, 124, 125, 127, 174, 175, 176, 177, 179, 180, 181, 182, 183, 185, 198, 202, 262, 337, 338, 450, 451 |
|
Ichimura, T.
1981
Mating types and reproductive isolation in Closterium ehrenbergii Meneghini.
Bot. Mag. Tokyo,
94,
325-334.
Keywords: biosystematic study; Closterium ehrenbergii; mating group; mating type; reproductive isolation Strain(s): 228, 229 DOI: 10.1007/BF02493393 |
|
Ichimura, T.
1983
Hybrid inviability and predominant survival of mating type minus progeny in laboratory crosses between two closely related mating groups of Closterium ehrenbergii.
Evolution,
37,
252-260.
Strain(s): 228, 229 |
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Ichimura, T.
1997
Chlamydomonas pulsatilla Wollenweber from a supra-littoral rockpool on a small island offshore the city of Muroran, Hokkaido, Japan.
Algol. Stud.,
85,
23-29.
Keywords: Chlamydomonas pulsatilla; euryhaline species; acetate; nutrition; supra-littoral rockpool Strain(s): 122 |
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Ichimura, T., Itoh, T.
1977
17. Preservation methods of microalgae (I) [17. Bisaisôrui no hozonhô (I)].
In Preservation methods of microorganisms [Biseibutsu Hozonhô], Ed. by Nei, T., University of Tokyo Press, Tokyo,
pp. 355-373 (in Japanese).
Strain(s): 19, 21, 22, 23, 24, 27, 28, 30, 31, 32, 33, 34, 36, 37, 38, 39, 40, 41, 44, 45, 46, 47, 48, 49, 50, 122, 123, 127, 131, 144, 152, 173, 175, 179, 180, 181, 182, 183, 185, 198, 200, 203, 206, 217, 226, 227, 241, 266, 267, 268, 271, 295, 309, 310, 334, 338, 379, 436, 448, 450, 455, 527 |
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Post-zygotic isolation between allopatric mating groups of Closterium ehrenbergii Meneghini (Conjugato-phyceae).
Phycologia,
23,
77-85.
Strain(s): 228, 229 DOI: 10.2216/i0031-8884-23-1-77.1 |
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Ichimura, T., Kasai, F.
1984
Time lapse analyses of sexual reproduction in Closterium ehrenbergii (Conjugatophyceae).
J. Phycol.,
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Keywords: Closterium ehrenbergii; conjugation; desmids; mating type; sexual reproduction Strain(s): 228, 229 DOI: 10.1111/j.0022-3646.1984.00258.x |
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Ichimura, T., Kasai, F.
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Studies on the life cycle of Spinoclosterium cuspidatum (Bailey) Hirano (Conjugatophyceae).
Phycologia,
24,
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Strain(s): 325 DOI: 10.2216/i0031-8884-24-2-205.1 |
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Ichimura, T., Kasai, F.
1987
Time-lapse analyses of sexual isolation between two closely related mating groups of the Closterium ehrenbergii species complex (Chlorophyta).
J. Phycol.,
23,
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Keywords: Closterium ehrenbergii; desmids; mating group; multiple-choice mating; no-choice mating; sexual interactions; sexual isolation; time-lapse photomicrography Strain(s): 228, 229 DOI: 10.1111/j.1529-8817.1987.tb04201.x |
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Ichimura, T., Kasai, F.
1989
Life cycles of homothallic and heterothallic clones of Triploceras gracile Bailey (Desmidiaceae, Chlorophyta).
Phycologia,
28,
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Strain(s): 789, 790, 791, 792, 793, 794, 795, 796 DOI: 10.2216/i0031-8884-28-2-212.1 |
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Ichimura, T., Watanabe, M.
1974
The Closterium calosporum complex from the Ryukyu Islands - Variation and taxonomical problems.
Mem. Natn. Sci. Mus. Tokyo,
7,
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Strain(s): 163, 164, 165, 168, 186, 187, 194, 271, 339, 340, 341 |
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Ichimura, T., Watanabe, M. M.
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An axenic clone of Microcystis aeruginosa Kutz. emend. Elenkin from Lake Kasumigaura.
Bull. Jpn. Soc. Phycol.,
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Strain(s): 44 |
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Diversity and oceanic distribution of the Parmales (Bolidophyceae), a picoplanktonic group closely related to diatoms.
ISME J.,
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Growth characteristics and vertical distribution of Triparma laevis (Parmales) during summer in the Oyashio region, western North Pacific.
Aquat. Microb. Ecol.,
68,
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Keywords: Triparma laevis; Parmales; Vertical distribution; Growth characteristics; Oyashio region Strain(s): 2565 DOI: 10.3354/ame01606 |
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Ichinomiya, M., Yoshikawa, S., Kmiya, M., Ohki, K., Takaichi, S., Kuwata, A.
2011
Isolation and characterization of Parmales (Heterokonta/Heterokontophyta/Stramenopiles) from the Oyashio region, Western North Pacific.
J. Phycol.,
47,
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Keywords: Bolidophyceae; diatoms; heterokonts; Parmales; PDMPO; phylogeny; stramenopiles; Triparma laevis Strain(s): 2565, 2682 PubMed: 27021720 DOI: 10.1111/j.1529-8817.2010.00926.x |
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Cytological analyses by advanced electron microscopy.
In Cyanidioschyzon merolae: A New Model Eukaryote for Cell and Organelle Biology, Eds. by Kuroiwa, T., Miyagishima, S., Matsunaga, S., Sato, N., Nozaki, H., Tanaka, K., Misumi, O., Springer Singapore,
pp. 129-151.
Keywords: FIB-SEM; SBF-SEM; EM-tomography; EM (electron microscopy); Block-face imaging; Cryo-TEM; Cryo-TEM tomography; Cyanidioschyzon merolae; Physical fixation Strain(s): 1804 DOI: 10.1007/978-981-10-6101-1_9 |
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Iehara, M.
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Kinetic analysis of the growth of Chlorella vulgaris.
Biotech. Bioeng.,
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Iida, H., Nishii, I., Inouye, I.
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Embryogenesis and cell positioning in Platydorina caudata (Volvocaceae, Chlorophyta).
Phycologia,
50,
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Keywords: Volvocaceae; inversion; intercalation; cytoplasmic bridge; stalk; colony formation Strain(s): 728, 729 DOI: 10.2216/10-80.1 |
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Cleavage, incomplete inversion, and cytoplasmic bridges in Gonium pectorale (Volvocales, Chlorophyta).
J. Plant Res.,
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Keywords: Cytoplasmic bridge; Gonium; Inversion; Multicellularity; Transmission electron microscopy; Volvocales Strain(s): 645 PubMed: 23455615 DOI: 10.1007/s10265-013-0553-7 |
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Assessing the monophyly of chlorophyll-c containing plastids by multi-gene phylogenies under the unlinked model conditions.
Mol. Phylogenet. Evol.,
45(1),
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Keywords: chromist; chromalveolate; secondary endosymbiosis; model misspecification; separate model; concatenate model Strain(s): 1, 15, 548, 670, 716 PubMed: 17591448 DOI: 10.1016/j.ympev.2007.05.003 |
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Iino, M., Hashimoto, H.
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Intermediate features of cyanelle division of Cyanophora paradoxa (Glaucocystophyta) between cyanobacterial and plastid division.
J. Phycol.,
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Keywords: chloroplast division; cyanelle; Cyanophora paradoxa; endosymbiosis; Glaucocystophyta; peptidoglycan; plastid dividing-ring; plastid division; plastid envelope Strain(s): 547 DOI: 10.1046/j.1529-8817.2003.02132.x |
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Chemotaxis toward inorganic phosphate in the red tide alga Chattonella antiqua.
J. Plankton Res.,
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Strain(s): 1 DOI: 10.1093/plankt/17.7.1587 |
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2019
First report of Microcystis strains producing MC-FR and -WR toxins in Japan.
Toxins,
11,
521 (article ID).
Keywords: Cyanobacteria; Microcystis; microcystins; environmental water; liquid chromatographymass spectrometry; protein phosphatase 2A inhibition assay Strain(s): 4344, 4345 PubMed: 31505765 DOI: 10.3390/toxins11090521 |
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Ikushima, T.
1975
Action of furylfuramide (AF-2) on chloroplasts of Euglena gracilis.
Annu. Rep. Res. Reactor Inst. Kyoto Univ.,
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Strain(s): 48 |
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Imai, A., Fukushima, T., Matsushige, K.
1999
Effects of aquatic humic substances on the growth of the cyanobacterium Microcystis aeruginosa.
J. Jpn. Soc. Wat. Environ. [Mizukankyô Gakkai Shi],
22,
555-560 (in Japanese with English summary).
Keywords: aquatic humic substances; Microcystis aeruginosa; iron limitation; siderophore; Lake Kasumigaura Strain(s): 98 |
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Imai, A., Fukushima, T., Matsushige, K.
1999
Effects of iron limitation and aquatic humic substances on the growth of Microcystis aeruginosa.
Can. J. Fish. Aquat. Sci.,
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Strain(s): 98 DOI: 10.1139/f99-131 |
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Imai, I., Fujimaru, D., Nishigaki, T.
2002
Co-culture of fish with macroalgae and associated bacteria: A possible mitigation strategy for noxious red tides in enclosed coastal sea.
Fish. Sci.,
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Keywords: red tide; mitigation; algicidal bacteria; macroalgae; co-culture of fish and macroalgae Strain(s): 1 DOI: 10.2331/fishsci.68.sup1_493 |
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Imai, I., Hatano, M., Naito, K.
2004
Development of a chemically defined artificial medium for marine red tide-causing raphidophycean flagellates.
Plankton Biol. Ecol.,
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Keywords: Chattonella; Fibrocapsa; artificial media; molybdenum; iodine Strain(s): 1 |
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Imai, I., Ishida, Y., Hata, Y.
1993
Killing of marine phytoplankton by a gliding bacterium Cytophaga sp., isolated from the coastal sea of Japan.
Mar. Biol.,
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Strain(s): 1 DOI: 10.1007/BF00355470 |
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Imai, I., Ishida, Y., Sakaguchi, K., Hata, Y.
1995
Algicidal marine bacteria isolated from northern Hiroshima Bay, Japan.
Fish. Sci.,
61,
628-636.
Keywords: algicidal bacteria; red tide; Chattonella; Alteromonas Strain(s): 1 DOI: 10.2331/fishsci.61.628 |
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Imai, I., Ishida, Y., Sawayama, S., Hata, Y.
1991
Isolation of a marine gliding bacterium that kills Chattonella antiqua (Raphidophyceae).
Nippon Suisan Gakkaishi,
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Imai, I., Kim, M. C., Nagasaki, K., Itakura, S., Ishida, Y.
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Detection and enumeration of microorganisms that are lethal to harmful phytoplankton in coastal waters.
Plankton Biol. Ecol.,
45,
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Keywords: red tide; Chattonella; Heterosigma; killer bacteria; viruses Strain(s): 1 |
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Imai, I., Kim, M. C., Nagasaki, K., Itakura, S., Ishida, Y.
1998
Relationships between dynamics of red tide-causing raphidophycean flagellates and algicidal micro-organisms in the coastal sea of Japan.
Phycol. Res.,
46,
139-146.
Keywords: algicidal bacteria; Chattonella; Heterosigma; Raphidophyceae; red tide; virus Strain(s): 1 DOI: 10.1111/j.1440-1835.1998.tb00106.x |
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Imai, I., Nakagiri, S., Nagai, K., Nagasaki, K., Itakura, S., Yamaguchi, M.
1998
Fluctuations of algicidal microorganisms against the harmful dinoflagellate Heterocapsa circularisquama in Ago Bay, Mie Prefecture, Japan.
Bull. Nansei Natl. Fish. Res. Inst.,
31,
53-61 (in Japanese with English summary).
Keywords: red tide; Heterocapsa circularisquama; algicidal bacteria; viruses; Ago Bay Strain(s): 1 |
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Imaizumi, M., Sekimoto, H., Noguchi, T.
2007
Induction of sex pheromone secretion and observations of the secretory pathway in the Closterium peracerosum-strigosum-littorale complex.
Plant Sci.,
173,
206-212.
Keywords: Closterium peracerosum-strigosum-littorale; Immunoelectron microscopy; Protoplast release-inducing protein; Sex pheromone; Sexual reproduction; Zygote formation Strain(s): 67, 68 DOI: 10.1016/j.plantsci.2007.05.002 |
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Imamura, N., Motoike, I., Noda, M., Adachi, K., Konno, A., Fukami, H.
2000
Argimicin A, a novel anti-cyanobacterial compound produced by an algae-lysing bacterium.
J. Antibiotics,
53,
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Strain(s): 102, 298 DOI: 10.7164/antibiotics.53.1317 |
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Imamura, N., Motoike, I., Shimada, N., Nishikori, M., Morisaki, H., Fukami, H.
2001
An efficient screening approach for anti-Microcystis compounds based on knowledge of aquatic microbial ecosystem.
J. Antibiotics,
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Strain(s): 102, 228 PubMed: 11560377 DOI: 10.7164/antibiotics.54.582 |
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Imamura, S., Hanaoka, M., Tanaka, K.
2008
The plant-specific TFIIB-related protein, pBrp, is a general transcription factor for RNA polymerase I.
EMBO J.,
27,
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Strain(s): 3377 PubMed: 18668124 DOI: 10.1038/emboj.2008.151 |
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Imamura, S., Kanesaki, Y., Ohnuma, M., Inouye, T., Sekine, Y., Fujiwara, T., Kuroiwa, T., Tanaka, K.
2009
R2R3-type MYB transcription factor, CmMYB1, is a central nitrogen assimilation regulator in Cyanidioschyzon merolae.
Proc. Nati. Acad. Sci. U. S. A.,
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Strain(s): 3377 PubMed: 1959251 DOI: 10.1073/pnas.0902790106 |
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Imamura, S., Nomura, Y., Takemura, T., Pancha, I., Taki, K., Toguchi, K., Tozawa, Y., Tanaka K.
2018
The checkpoint kinase TOR (target of rapamycin) regulates expression of a nuclear‐encoded chloroplast RelA‐SpoT homolog (RSH) and modulates chloroplast ribosomal RNA synthesis in a unicellular red alga.
Plant J.,
94,
327-339.
Keywords: RelA-SpoT homolog; ppGpp; red alga; ribosomal RNA; target of rapamycin Strain(s): 3377 PubMed: 29441718 DOI: 10.1111/tpj.13859 |
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Imamura, S., Terashita, M., Ohnuma, M., Maruyama, S., Minoda, A., Weber, A. P. M., Inouye, T., Sekine, Y., Fujita, Y., Omata, T., Tanaka, K.
2010
Nitrate assimilatory genes and their transcriptional regulation in a unicellular red alga Cyanidioschyzon merolae: genetic evidence for nitrite reduction by a sulfite reductase-like enzyme.
Plant Cell Physiol.,
51,
707-717.
Keywords: Cyanidioschyzon merolae; Nitrate assimilation; Nitrite reductase; Nitrogen regulation; Red alga; Sulfite reductase Strain(s): 3377 PubMed: 20375110 DOI: 10.1093/pcp/pcq043 |
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2017
Application of MALDI Biotyper to cyanobacterial profiling.
Rapid Commun. Mass Spectrom.,
31,
325-332.
Strain(s): 73, 89, 102, 103, 107, 112, 298, 611, 808, 809, 835, 843, 989, 1025, 1043, 1058, 1071, 1099, 1642, 1652, 1672 PubMed: 27862451 DOI: 10.1002/rcm.7793 |
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Estimating the viability of Chlorella exposed to oxidative stresses based around photocatalysis.
Int. Biodeterior. Biodegrad.,
78,
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Keywords: Autofluorescence; Cell staining; Chlorella sorokiniana; Oxidative stress: TiO2 photocatalysis; Viability assay Strain(s): 2169 DOI: 10.1016/j.ibiod.2012.12.006 |
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Imoto, Y., Kuroiwa, H., Yoshida, Y., Ohnuma, M., Fujiwara, T., Yoshida, M., Nishida, K., Yagisawa, F., Hirooka, S., Miyagishima, S.Y., Misumi, O., Kawano, S., Kuroiwa, T.
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Single-membrane-bound peroxisome division revealed by isolation of dynamin-based machinery.
Proc. Nati. Acad. Sci. U. S. A.,
110,
9583-9588.
Strain(s): 3377 PubMed: 23696667 DOI: 10.1073/pnas.1303483110 |
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Inaba, N., Trainer, V., Nagai, S., Kojima, S., Sakami, T., Takagi, S., Imai, I.
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Dynamics of seagrass bed microbial communities in artificial Chattonella blooms: A laboratory microcosm study.
Harmful Algae,
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Keywords: Microcosm; Study; Chattonella; Harmful algal blooms (HAB); Seagrass; HAB ; prevention Strain(s): 1 PubMed: 31128798 DOI: 10.1016/j.hal.2018.12.004 |
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Inaba, N., Watanabe, T., Sakami, T., Nishi, H., Tahara, Y., Imai, I.
2014
Temporal and spatial distribution of algicidal and growth-inhibiting bacteria in the coastal sea of southwest Japan.
J. Plankton Res.,
36,
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Keywords: algicidal bacteria; growth-inhibiting bacteria; particle-associated bacteria; free-living bacteria; harmful algal blooms Strain(s): 1 DOI: 10.1093/plankt/fbt119 |
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Inada, Y.
1958
Stimulatory and inhibitory effect of light on the nitrate assimilation by Chlorella.
J. Gen. Appl. Microbiol.,
4,
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Strain(s): 2170 DOI: 10.2323/jgam.4.153 |
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Inagaki, Y., Ehara, M., Watanabe, K. I., Hayashi-Ishimaru, Y., Ohama, T.
1998
Directionally evolving genetic code: the UGA codon from stop to tryptophan in mitochondria.
J. Mol. Evol.,
47,
378-384.
Keywords: COXI phylogenetic tree; UGA codon; deviant genetic code; directional codon reassignment Strain(s): 12, 227, 274 PubMed: 9767683 DOI: 10.1007/PL00006395 |
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Inagaki, Y., Hayashi-Ishimaru, Y., Ehara, M., Igarashi, I., Ohama, T.
1997
Algae or protozoa: phylogenetic position of euglenophytes and dinoflagellates as inferred from mitochondrial sequences.
J. Mol. Evol.,
45,
295-300.
Keywords: mitochondrial COXI gene; Dinoflagellata; Apicomplexa; Kinetoplastida; Euglenophyta; endosymbiosis; genetic code; malarian circle Strain(s): 12, 381 DOI: 10.1007/PL00006233 |
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Inamori, Y., Ohno, Y., Kaya, K., Watanabe, M. M., Sudo, R.
1990
Studies on the removal and decomposition of Microcystis viridis toxic substance in the bio-film reactor.
Jpn. J. Water Poll. Res.,
13,
525-530 (in Japanese with English summary).
Keywords: Microcystis viridis; toxic substance cyanoviridin; bio-film reactor; hydraulic retention time Strain(s): 102 |
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Inamura, E., Katayama, T., Taguchi, S.
2017
Absorption of low-dose ultraviolet radiation by mycosporine-like amino acids induced by the dinoflagellate Prorocentrum micans.
Plankton Benthos Res.,
12,
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Keywords: mycosporine-glycine; palythene; palythine; porphyra-334; shinorine Strain(s): 218 DOI: 10.3800/pbr.12.15 |
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Inoue, Y., Hata, T., Kawai, S., Okamura,H., Nishida, T.
2010
Elimination and detoxification of triclosan by manganese peroxidase from white rot fungus.
J. Hazard. Mater.,
180,
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Keywords: Triclosan; Bacterial growth inhibition; Algal growth inhibition; Manganese peroxidase; Ligninolytic enzymes; White rot fungi Strain(s): 35 PubMed: 20434837 DOI: 10.1016/j.jhazmat.2010.04.024 |
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Inoue-Sakamoto, K., Nazifi, E., Tsuji, C., Asano, T., Nishiuchi, T., Matsugo, S., Ishihara, K., Kanesaki, Y., Yoshikawa, H., Sakamoto, T.
2018
Characterization of mycosporine-like amino acids in the cyanobacterium Nostoc verrucosum.
J. Gen. Appl. Microbiol.,
64,
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Keywords: antioxidant; environmental adaptation; mycosporine-like amino acid (MAA); mys genes Strain(s): 2538, 2539 DOI: 10.2323/jgam.2017.12.003 |
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Inoue-Sakamoto, K., Tanji, Y., Yamaba, M., Natsume, T., Masaura, T., Asano, T., Nishiuchi, T., Sakamoto, T.
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Characterization of extracellular matrix components from the desiccation-tolerant cyanobacterium Nostoc commune.
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Keywords: anhydrobiosis; desiccation tolerance; extracellular polysaccharide (EPS); superoxide dismutase (SOD); water stress protein (WspA) Strain(s): 2108, 2538, 3989, 3990, 3991 PubMed: 29225284 DOI: 10.2323/jgam.2017.03.001 |
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Ioki, M., Ohkoshi, M., Nakajima, N., Nakahira-Yanaka, Y., Watanabe, M. M.
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Isolation of herbicide-resistant mutants of Botryococcus braunii.
Bioresour. Technol.,
109,
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Keywords: Botryococcus braunii; Paraquat; Methyl viologen; Basta; Glufosinate Strain(s): 35, 119, 227, 230, 2235 PubMed: 21906932 DOI: 10.1016/j.biortech.2011.07.101 |
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One-pot, simultaneous cell wall disruption and complete extraction of astaxanthin from Haematococcus pluvialis at room temperature.
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Keywords: Haematococcus pluvialis; One-pot method; Cell wall disruption; Extraction; Astaxanthin; Antioxidant activity; GRAS solvent Strain(s): 144 DOI: 10.1021/acssuschemeng.9b02089 |
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Isaka, N., Kawai-Toyooka, H., Matsuzaki, R., Nakada, T., Nozaki, H.
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Description of two new monoecious species of Volvox sect. Volvox (Volvocaceae, Chlorophyceae), based on comparative morphology and molecular phylogeny of cultured material.
J. Phycol.,
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Keywords: Chlorophyceae; cultures; molecular phylogeny; morphology; taxonomy; Volvocaceae; Volvox ferrisii sp. nov.; Volvox kirkiorum sp. nov.; Volvox sect. Volvox Strain(s): 543, 2736, 2737, 2738, 2739, 2740 PubMed: 27011093 DOI: 10.1111/j.1529-8817.2012.01142.x |
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Iseki, M., Matsunaga, S., Murakami, A., Ohno, K., Shiga, K., Yoshida, K., Sugai, M., Takahashi, T., Hori, T., Watanabe, M.
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A blue-light-activated adenylyl cyclase mediates photoavoidance in Euglena gracilis.
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Ishibashi, Y., Ichiyanagi, J., Gotoh, M., Konno, H.
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Culture conditions and characteristics of offensive odor-producing substance in the genus Uroglena [Uroglena zoku no baiyôjôken to syûkibusshitsu tokusei].
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Ishibashi, Y., Oikawa, E., Honda, H., Adachi, T., Nakatochi, M.
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Analyses of growth factors of taste and odor producing algae by a fuzzy neural network.
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Keywords: musty odor; Phormidium tenue; Uroglena americana; fuzzy neural network; wind speed Strain(s): 512 DOI: 10.11532/proes1992.44.255 |
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Ishida, K., Matsuda, H., Murakami, M.
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Four new microginins, linear peptides from the cyanobacterium Microcystis aeruginosa.
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Ishida, K., Matsuda, H., Murakami, M.
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Micropeptins 88-A to 88-F, chymotrypsin inhibitors from the cyanobacterium Microcystis aeruginosa (NIES-88).
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Ishida, K., Matsuda, H., Murakami, M., Yamaguchi, K.
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Kawaguchipeptin A, a novel cyclic undecapeptide from cyanobacterium Microcystis aeruginosa (NIES-88).
Tetrahedron,
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Ishida, K., Matsuda, H., Murakami, M., Yamaguchi, K.
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The absolute stereochemistry of micropeptin 90.
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Kawaguchipeptin B, an antibacterial cyclic undecapeptide from the cyanobacterium Microcystis aeruginosa.
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Microginins 299-A and -B, leucine aminopeptidase inhibitors from the cyanobacterium Microcystis aeruginosa (NIES-299).
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Micropeptins 478-A and -B, plasmin inhibitors from the cyanobacterium Microcystis aeruginosa.
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Kasumigamide, an antialgal peptide from the cyanobacterium Microcystis aeruginosa.
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Cylindrical phycobilisomes from a blue-green alga, Anabaena variabilis.
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Isono, T., Katoh, T.
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Subparticles of Anabaena phycobilisomes. 1. Reconstruction of allophycocyanin cores and entire phycobilisomes.
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Oscillapeptins A to F, serine protease inhibitors from the three strains of Oscillatoria agardhii.
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Two structural isomeric siderophores from the freshwater cyanobacterium Anabaena cylindrica (NIES-19).
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Applicability of environmental microorganisms to alkaline single cell gel electrophoresis (comet) assay.
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Keywords: comet assay; DNA damage; environmental microorganisms; Euglena gracilis; cell lysis; unwinding; electrophoresis; SDS; γ-irradiation Strain(s): 49, 122, 403 |
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Normalization of DNA damage indices in comet assay for comparing with various mutagenicity tests.
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Manipulation of oil synthesis in Nannochloropsis strain NIES-2145 with a phosphorus starvation–inducible promoter from Chlamydomonas reinhardtii.
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A novel glycolate oxidase requiring flavin mononucleotide as the cofactor in the prasinophycean alga Mesostigma viride.
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Characterization of NADH nitrate reductase from the coccolithophorid Emiliania huxleyi (Lohman) Hay & Mohler (Haptophyceae).
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Characterization of intracellular iodine accumulation by iodine-tolerant microalgae.
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Accumulation of cesium by aquatic plants and algae.
In Impact of Cesium on Plants and the Environment, Eds. by Gupta, D. & Walther, C., Springer International Publishing,
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Distribution of nucleic acids among subcellular fractions of Chlorella.
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Iwamura, T.
1962
Cellular distributions and properties of nucleic acid species in Chlorella.
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Strain(s): 2170 |
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Iwamura, T.
1962
Characterization of the turnover of chloroplast deoxyribonucleic acid in Chlorella.
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1965
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Nucleic acid in chloroplasts and metabolic DNA.
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Multiplication of chloroplast DNA.
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Strain(s): 2170 |
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Iwamura, T., Kanazawa, T., Kanazawa, K.
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Iwamura, T., Kanazawa, T., Kanazawa, K.
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Nucleotide metabolism in Chlorella. II. Quantitative changes in component-nucleotides of the acid-soluble fraction of algal cells during their life-cycle.
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Iwamura, T., Kunieda, R. Kuwashima, S., Nishimura, T.
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Further observations on the deoxyribonucleic acid species in Chlorella showing light-dependent metabolic turnover.
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Two DNA species in chloroplasts of Chlorella.
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Changes in the content and distribution of the nucleic acid bases in Chlorella during the life cycle.
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Iwamura, T., Nagai, H., Ichimura, S.
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Improved methods for determining contents of chlorophyll, protein, ribonucleic acid, and deoxyribonucleic acid in planktonic populations.
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Iwamura, T., Takeda, Y., Nishimura, T.
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A c-myc like DNA fragment in Chlorella.
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Studies on the red tide dinoflagellates - II. On Heterosigma inlandica appeared in Gokasho Bay, Shima Peninsula.
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In Nippon-koku Tokkyo-chô (JP), Kôkai Tokkyo Kôhô (A), Hei3-163102,
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Iwataki, M., Botes, L., Sawaguchi, T., Sekiguchi, K., Fukuyo, Y.
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Iwataki, M., Hansen, G., Sawaguchi, T., Hiroishi, S., Fukuyo, Y.
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Aqueous size-exclusion chromatographic method for the quantification of cyanobacterial native glycogen.
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Jaiswal, T. P., Chakraborty, S., Singh, P., Mishra, A. K., Singh, S. S.
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Description of hot spring dwelling Mastigocladus ambikapurensis sp. nov., using a polyphasic approach.
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Keywords: 16S rRNA gene; Cyanobacteria; ITS; Mastigocladus; Phylogeny Strain(s): 592, 3754 DOI: 10.1007/s00606-021-01755-2 |
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Jang, M. H., Ha, K., Lucas, M. C., Joo, G. J., Takamura, N.
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Changes in microcystin production by Microcystis aeruginosa exposed to phytoplanktivorous and omnivorous fish.
Aquat. Toxicol.,
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Jang, M.-H., Ha, K., Jung, J.-M., Lee, Y.-J., Takamura, N.
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Increased microcystin production of Microcystis aeruginosa by indirect exposure of nontoxic cyanobacteria: potential role in the development Microcystis bloom.
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Jang, M.-H., Ha, K., Takamura, N.
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Reciprocal allelopathic responses between toxic cyanobacteria (Microcystis aeruginosa) and duckweed (Lemna japonica).
Toxicon,
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Jang, M.-H., Ha, K., Takamura, N.
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Microcystin production by Microcystis aeruginosa exposed to different stages of herbivorous zooplankton.
Toxicon,
51,
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Jang, M.-H., Jung, J.-M., Takamura, N.
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Changes in microcystin production in cyanobacteria exposed to zooplankton at different population densities and infochemical concentrations.
Limnol. Oceanogr.,
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Jang, M-H., Ha, K., Joo, G-J., Takamura, N.
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Toxin production of cyanobacteria is increased by exposure to zooplankton.
Freshw. Biol.,
48,
1540-1550.
Keywords: info-chemicals; microcystin production; Microcystis aeruginosa; zooplankton; zooplankton culture media filtrate Strain(s): 44, 87, 88, 99 DOI: 10.1046/j.1365-2427.2003.01107.x |
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Differential response of photosynthetic apparatus towards alkaline pH treatment in NIES-39 and PCC 7345 strains of Arthrospira platensis.
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Jangir, M. M., Vani, B., Chowdhury, S.
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Analysis of seven putative Na+/H+ antiporters of Arthrospira platensis NIES-39 using transcription profiling and In-silico studies: an indication towards alkaline pH acclimation.
Physiol. Mol. Biol. Plants
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A common red algal origin of the apicomplexan, dinoflagellate, and heterokont plastids.
Proc. Natl. Acad. Sci. U. S. A.,
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Jeong, S.-Y., Son, H.-J.
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Effects of mycosubtilin homolog algicides from a marine bacterium, Bacillus sp. SY-1, against the harmful algal bloom species Cochlodinium polykrikoides.
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Expression and manufacturing of protein therapeutics in spirulina.
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Jiang, J., Lu, Y.
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Metabolite profiling of Breviolum minutum in response to acidification.
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Jiang, R., Qin, L., Feng, S., Huang, D., Wang, Z., Zhu, S.
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The joint effect of ammonium and pH on the growth of Chlorella vulgaris and ammonium removal in artificial liquid digestate.
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Phylogenetic relationships and genetic divergence of paralytic shellfish toxin- and cylindrospermopsin- producing Cylindrospermopsis and raphidiopsis.
Harmful Algae,
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101792 (article ID).
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Influence of increased nutrient supply on Microcystis aeruginosa at cellular and proteomic levels.
Aquat. Microb. Ecol.,
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Antibiotic contaminants reduced the treatment efficiency of UV-C on Microcystis aeruginosa through hormesis.
Environ. Pollut.,
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Preliminary toxicity Assessment of combined Sewer overflows in Toyama, Japan.
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Reduced resilience of a globally distributed coccolithophore to ocean acidification: Confirmed up to 2000 generations.
Mar. Pollut. Bull.,
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Evolutionary responses of a coccolithophorid Gephyrocapsa oceanica to ocean acidification.
Evolution,
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Ocean acidification alters the photosynthetic responses of a coccolithophorid to fluctuating ultraviolet and visible radiation.
Plant Physiol.,
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Mar. Pollut. Bull.,
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Development of novel microsatellite markers for strain-specific identification of Chlorella vulgaris.
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Isolation, identification, and biochemical characteristics of a cold-tolerant Chlorella vulgaris KNUA007 isolated from King George Island, Antarctica.
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Highly divergent 16S rRNA sequences in ribosomal operons of Scytonema hyalinum (Cyanobacteria).
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Effects of bromide and iodine on stalk secretion in the biofouling diatom Achnanthes longipes (Bacillariophyceae).
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Keywords: Achnanthes longipes; Bacillariophyceae; biofouling; bromide; diatom; EPS secretion; image analysis; inhibition of adhesion; iodine; Lotus-FITC; stalks Strain(s): 330 DOI: 10.1111/j.0022-3646.1995.00401.x |
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Cell size for commitment to cell division and number of successive cell divisions in cyanidialean red algae.
Protoplasma,
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Algal growth potential of Microcystis aeruginosa from reclaimed water.
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Prasinoderma singularis sp. nov. (Prasinophyceae, Chlorophyta), a solitary coccoid prasinophyte from the South-East Pacific Ocean.
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The analysis of cyanobacterial neurotoxins by high-performance liquid chromatography-mass spectrometry.
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Pseudomonas flurescens HYK0210-SK09 offers species-specific biological control of winter algal blooms caused by freshwater diatom Stephanodiscus hantzschii.
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Effects of temperature and irradiance on growth of strains belonging to seven Skeletonema species isolated from Dokai Bay, southern Japan.
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Photoautotrophic high-density cultivation of vegetative cells of Haematococcus pluvialis in airlift bioreactor.
Bioresour. Technol.,
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Keywords: Airlift bioreactors; Astaxanthin; Autotrophic; Bioprocess design; Bubble columns; Microalgae Strain(s): 144 PubMed: 16516464 DOI: 10.1016/j.biortech.2006.01.011 |
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Aurearenophyceae classis nova, a new class of Heterokontophyta based on a new marine unicellular alga Aurearena cruciata gen. et sp. nov. inhabiting sandy beaches.
Protist,
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Keywords: flagellar apparatus; Phaeophyceae; Phaeothamniophyceae; pigment composition; Xanthophyceae; phylogeny Strain(s): 1862, 1863, 1864, 1865 PubMed: 18358776 DOI: 10.1016/j.protis.2007.12.003 |
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A front-end desaturase from the green alga Chlamydomonas reinhardtii produces pinolenic and coniferonic acids by ω13 desaturation in methylotrophic yeast and tobacco.
Plant Cell Physiol.,
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Keywords: Chlamydomonas reinhardtii; Δ5-unsaturated bis-methylene-interrupted fatty acids; fatty acid desaturase; Pichia pastoris; tobacco plant Strain(s): 2235 PubMed: 16267098 DOI: 10.1093/pcp/pci224 |
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Isolation and functional identification of a novel cDNA for astaxanthin biosynthesis from Haematococcus pluvialis, and astaxanthin synthesis in Escherichia coli.
Plant Mol. Biol.,
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Keywords: astaxanthin; canthaxanthin; carotenoid; xanthophyll; Haematococcus pluvialis; green alga Strain(s): 144 PubMed: 7579184 DOI: 10.1007/BF00043657 |
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Culture temperature affects gene expression and metabolic pathways in the 2-methylisoborneol-producing cyanobacterium Pseudanabaena galeata.
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Ca2+- and glycoconjugates-dependent prey capture in the heliozoan Actinophrys sol.
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Keywords: calium ion influx; Con A; exocytosis; extrusome; glycoprotein; secretory granule Strain(s): 2497 PubMed: 18178392 DOI: 10.1016/j.ejop.2007.11.001 |
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Kamata, K., Piao, Z., Suzuki, S., Fujimori, T., Tajiri, W., Nagai, K., Iyoda, T., Yamada, A., Hayakawa, T., Ishiwara, M., Horaguchi, S., Belay, A., Tanaka, T., Takano, K., Hangyo M.
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Spirulina-templated metal microcoils with controlled helical structures for THz electromagnetic responses.
Sci Rep,
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Growth stimulation and inhibition effects of 4-hydroxybenzoic acid and some related compounds on the freshwater green alga Pseudokirchneriella subcapitata.
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2020
Tylosin degradation during manure composting and the effect of the degradation byproducts on the growth of green algae.
Sci. Total Environ.,
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Keywords: Sheep feces; Half-life; Thermal degradation; Elution from artificial rainwater; Acute toxicity test; Raphidocelis subcapitata Strain(s): 35 DOI: 10.1016/j.scitotenv.2020.137295 |
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Application of a real-time PCR assay to a comprehensive method of monitoring harmful algae.
Mircobes Environ.,
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Kamikawa, R., Azuma, T., Ishii, K-I., Matsuno, Y., Miyashita, H.
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Diversity of organellar genomes in non-photosynthetic diatoms.
Protist,
169,
351-361.
Keywords: ATP synthase complex; mitochondria; Nitzschia; plastids; vitamin B1 Strain(s): 2729, 3576, 3581 PubMed: 29803116 DOI: 10.1016/j.protis.2018.04.009 |
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Kamikawa, R., Brown, M. W., Nishimura, Y., Sako, Y., Heiss, A. A., Yubuki, N., Gawryluk, R., Simpson, A. G. B., Roger, A. J., Hashimoto, T., Inagaki, Y.
2013
Parallel re-modeling of EF-1α function: divergent EF-1α genes co-occur with EFL genes in diverse distantly related eukaryotes.
BMC Evol. Biol.,
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131 (article ID).
Keywords: Diatoms; Differential Gene Loss; EF-1α; EFL; Functional Remodeling; Goniomonas; Pythium; Spizellomyces; Thecamonas Strain(s): 417, 534, 1349, 1371, 1373, 1374 PubMed: 23800323 DOI: 10.1186/1471-2148-13-131 |
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Mitochondrial group II introns in the Raphidophycean flagellate Chattonella spp. suggest a diatom-to-Chattonella lateral group II intron transfer.
Protist,
160,
364-375.
Keywords: Chattonella; cytochrome c oxidase subunit 1 (cox1); diatoms; group II intron; lateral transfer; Raphidophyceae Strain(s): 1, 2, 3, 14, 85, 86, 115, 118, 121, 161, 462, 557, 558, 603, 671, 716, 849, 1303, 1975, 1976, 2391, 2401, 2402, 2403, 2404, 3422, 3429 PubMed: 19346162 DOI: 10.1016/j.protis.2009.02.003 |
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Kamikawa, R., Masuda, I., Oyama, K., Yoshimatsu, S., Sako, Y.
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Genetic variation in mitochondrial genes and intergenic spacer region in harmful algae Chattonella species.
Fish. Sci.,
73,
871-880.
Keywords: Chattonella sp.; cytochrome c oxidase subunit 1 (cox1); cytochrome c oxidase subunit 2 (cox2); genetic diversity; harmful algae; mitochondria Strain(s): 1, 2, 3, 14, 85, 86, 115, 118, 121, 161, 557, 558, 603, 671, 849, 3422, 3428, 3429 DOI: 10.1111/j.1444-2906.2007.01408.x |
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Kamikawa, R., Sanchez-Perez, G. F., Sako, Y., Roger, A. J., Inagaki, Y.
2009
Expanded phylogenies of canonical and non-canonical types of methionine adenosyltransferase reveal a complex history of these gene families in eukaryotes.
Mol. Phylogenet. Evol.,
53,
565-570.
Keywords: Methionine adenosyltransferase; Lateral gene transfer; Diaoms; Aureococcus; Haptophytes; Cryptomonads Strain(s): 17, 350, 417, 534, 586, 1045, 1349 PubMed: 19577655 DOI: 10.1016/j.ympev.2009.06.016 |
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Kamikawa, R., Shiratori, T., Ishida, K-I., Miyashita, H., Roger, A. J.
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Group II intron-mediated trans-splicing in the green-rich mitochondrial genome of an enigmatic eukaryote, Diphylleia rotans.
Genome Biol. Evol.,
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Keywords: Diphyllatia; introns; mitochondria; inverted repeats; trans-splicing Strain(s): 3764 PubMed: 26833505 DOI: 10.1093/gbe/evw011 |
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Kamikawa, R., Tanifuji, G., Kawachi, M., Miyashita, H., Hashimoto, T., Inagaki, Y.
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Plastid genome-based phylogeny pinpointed the origin of the green-colored plastid in the dinoflagellate Lepidodinium chlorophorum.
Genome Biol. Evol,
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Keywords: genome reduction; Lepidodinium; Pedinophyceae; secondary plastids; plastid replacement Strain(s): 1868 PubMed: 25840416 DOI: 10.1093/gbe/evv060 |
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Kamikawa, R., Tanifuji, Ishikawa, G. S., Ishii, K., Matsuno, Y., Onodera, N. T., Ishida, K-I., Hashimoto, T., Miyashita, H., Mayama, S., Inagaki, Y.
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Proposal of a Twin-arginine translocator system-mediated constraint against loss of ATP synthase genes from nonphotosynthetic plastid genomes.
Mol. Biol. Evol.,
32,
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Keywords: apochlorotic diatoms; nonphotosynthetic plastid genome; genome reduction; ATP synthase complex; Twin-arginine translocator Strain(s): 3581 PubMed: 26048548 DOI: 10.1093/molbev/msv134 |
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Kamikawa, R., Yabuki, A., Nakayama, T., Ishida, K-I., Hashimoto, T., Inagaki, Y.
2011
Cercozoa comprises both EF-1α-containing and EFL-containing members.
Eur. J. Protistol.,
47,
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Keywords: Cercozoa; Elongation factor 1α; Elongation factor-like protein Strain(s): 2378 PubMed: 21071191 DOI: 10.1016/j.ejop.2010.08.002 |
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Fates of evolutionarily distinct, plastid‐type glyceraldehyde 3‐phosphate dehydrogenase genes in kareniacean dinoflagellates.
J. Eukaryot. Microbiol.,
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Keywords: endosymbiotic gene transfer; gapC1 gene Strain(s): 2411 PubMed: 29478272 DOI: 10.1111/jeu.12512 |
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Kamikawa, R., Yubuki, N., Yoshida, M., Taira, M., Nakamura, N., Ishida, K-I., Leander, B. S., Miyashita, H., Hashimoto, T., Mayama, S., Inagaki, Y.
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Multiple losses of photosynthesis in Nitzschia (Bacillariophyceae).
Phycol. Res.,
63,
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Keywords: apochlorotic diatoms; genetic diversity; large subunit rRNA; molecular phylogenetic analysis; nonphotosynthetic plastids; plastid 16S rRNA Strain(s): 3576, 3577, 3578, 3579, 3580, 3581 DOI: 10.1111/pre.12072 |
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Kamiya, A.
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Blue light-induced in vivo absorbance changes and in vitro activation of nitrate reductase in a nitrate-starved Chlorella mutant.
Plant Cell Physiol.,
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Kamiya, A.
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Effects of blue light and ammonia on nitrogen metabolism in a colorless mutant of Chlorella.
Plant Cell Physiol.,
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Kamiya, A., Miyachi, S.
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Effects of blue light on respiration and carbon dioxyde fixation in colorless Chlorella mutant cells.
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Blue light-induced formation of photphoenolpyruvate carboxylase in colorless Chlorella mutant cells.
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Subunit constitution of carbonic anhydrase from Chlamydomonas reinhardtii.
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Quantitative separation of inorganic polyphosphates in Chlorella cells.
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Light-induced formation and mobilization of polyphosphate "C" in Chlorella cells.
Plant Cell Physiol.,
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Synchronous culture of Chlorella with special reference of the processes of assimilation of potassium magnesium and iron.
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Mass culture of unicellular algae using "open circulation method".
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Lipids extracted from several species of natural blue–green microalgae by dimethyl ether: Extraction yield and properties.
Fuel,
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CRISPR/Cas9-based knockouts reveal that CpRLP1 is a negative regulator of the sex pheromone PR-IP in the Closterium peracerosum-strigosum-littorale complex.
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Short-term algal toxicity test based on phosphate uptake.
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Toxicity evaluation of municipal solid waste incinerator fly ash by algal assay.
Reports Facul. Eng. Yamanashi Univ.,
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Strain(s): 35 |
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Kaneko, H., Yamaguchi, M., Ikeda, F.
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Toxicity of municipal solid waste incinerator fly ash and the contribution of Cadmium.
J. Jpn. Soc. Wat. Environ. [Mizukankyô Gakkai Shi],
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Keywords: MWI fly ash; leachate; algal assay; Daphnia test; hazardous waste Strain(s): 35 |
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External light conditions and internal cell cycle phases coordinate accumulation of chloroplast and mitochondrial transcripts in the red alga Cyanidioschyzon merolae.
DNA Res.,
19,
289-303.
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Isolation and molecular identification of some blue-green algae (cyanobacteria) from freshwater sites in Tokat province of Turkey.
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Liquid chromatotraphy - mass spectrometry in distribution and bioaccumulation studies of toxic cyanopeptides.
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The interactive effects of UV-B radiation and a herbicide on uptake and allocation of carbon in two strains of the green alga Scenedesmus.
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Genetic changes in phytoplankton communities exposed to the herbicide simetryn in outdoor experimental ponds.
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Morphological variabilities of three closely related mating groups of Closterium ehrenbergii Meneghini (Chlorophyta).
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Temperature optima of three closely related mating groups of the Closterium ehrenbergii (Chlorophyta) species complex.
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Immunological cross-reactivity among corresponding proteins of photosystems I and II from widely divergent photosynthetic organisms.
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Kashiyama Y., Yokoyama A., Kinoshita Y., Shoji S., Miyashiya H., Shiratori T., Suga H., Ishikawa K., Ishikawa A., Inouye I., Ishida K., Fujinuma D., Aoki K., Kobayashi M., Nomoto S., Mizoguchi T., Tamiaki H.
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Ubiquity and quantitative significance of detoxification catabolism of chlorophyll associated with protistan herbivory.
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Keywords: phototoxicity of chlorophylls; microbial herbivory; phagocytosis; biodiversity of eukaryotes; microbial loop Strain(s): 281 PubMed: 22949677 DOI: 10.1073/pnas.1207347109 |
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ISME J.,
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Strain(s): 8, 254, 274, 286, 324, 331, 353, 381, 494, 623, 624, 997, 1012, 1013, 1015, 1320, 1330, 1333, 1334, 1335, 1372, 1377, 1388, 1390, 1396, 1397, 1408, 1438, 1439, 1441, 1868, 1964, 2008, 2142, 2144, 2149, 2300, 2305, 2325, 2411, 2433, 2498, 2502, 2566, 2584, 2586, 2589, 2590, 2677, 2878, 3374, 3604, 3775, 3876 PubMed: 30809012 DOI: 10.1038/s41396-019-0377-0 |
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Keywords: Apical expansion; Aureochrome; Blue light; Branching; Ca2+ ion; Coenocyte; Lightgrowth response; Negative phototropism; Polarotropism; Positive phototropism; Split-field illumination method; Unilateral illumination method; Vaucheria Strain(s): 2614, 2615 PubMed: 30694469 DOI: 10.1007/978-1-4939-9015-3_8 |
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PCR primers for selective detection of intra-species variations in the bloom-forming cyanobacterium, Microcystis.
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Recent introduction of a freshwater red alga Chantransia macrospora (Batrachospermales, Rhodophyta) to Okinawa, Japan.
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Mating type interaction in Closterium peracerosum-strigosum-littorale: mating induced protoplast release.
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Rediscovery of the wild-extinct species Nitellopsis obtusa (Charales) in Lake Kawaguchi, Japan.
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Keywords: Charales; Nitellopsis; rbcL gene; rediscovery; wild-extinct species Strain(s): 1638 |
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Morphological variation and intraspecific phylogeny of the ubiquitous species Chara braunii (Charales, Charophyceae) in Japan.
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Keywords: aquatic habitat; Chara braunii; Charales; Charophyceae; intergenic spacer region; intraspecific phylogeny; morphological variation, rbcL gene Strain(s): 1586, 1587, 1588, 1589, 1590, 1591, 1593, 1604 DOI: 10.2216/07-27.1 |
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Allozyme divergence in Microcystis (Cyanophyceae) and its taxonomic inference.
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Keywords: cyanophytes/cyanobacteria; Microcystis; allozyme divergence; allozyme genotype; allozyme study; cell size; molecular taxonomy Strain(s): 1055, 1058, 1061, 1063, 1064, 1067, 1068, 1070, 1071, 1074, 1077, 1079, 1081, 1084, 1086, 1090, 1091, 1093, 1095, 1097, 1098 |
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Effect of calcium ion on uptake of amino acids by symbiotic Chlorella F36-ZK isolated from Japanese Paramecium bursaria.
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Keywords: Paramecium bursaria; Chlorella; Calcium; Divalent cation; Amino acid transport; Symbiosis Strain(s): 227, 2157, 2540 DOI: 10.1016/j.plantsci.2007.10.001 |
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Kato, Y., Ueno, S., Imamura, N.
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Studies on the nitrogen utilization of endosymbiotic algae isolated from Japanese Paramecium bursaria.
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Keywords: Endosymbiont; Paramecium bursaria; Nitrogen utilization; Chlorella Strain(s): 227, 2540, 2541 DOI: 10.1016/j.plantsci.2005.09.018 |
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Isolation and characterization of drought-tolerant cyanobacterium Nostoc sp. HK-01.
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Phylogenetic analysis of NAP, an unconventional actin of the Volvocales.
Plant Syst. Evol.,
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Astaxanthin production by Haematococcus pluvialis under illumination with LEDs.
Enzyme Microb. Technol.,
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Katsuda, T., Shimahara, K., Shiraishi, H., Yamagami, K., Ranjbar, R., Katoh, S.
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Effect of flashing light from blue light emitting diodes on cell growth and astaxanthin production of Haematococcus pluvialis.
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Effect of light intensity and frequency of flashing light from blue light emitting diodes on astaxanthin production by Haematococcus pluvialis.
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Validation of rapid algal bioassay using delayed fluorescence in an interlaboratory ring study.
Sci. Total Environ.,
605-606,
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Katsumata, M., Koike, T., Nishikawa, M., Kazumura, K., Tsuchiya, H.
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Rapid ecotoxicological bioassay using delayed fluorescence in the green alga Pseudokirchneriella subcapitata.
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Application of cryopreservation to genetic analyses of a photosynthetic picoeukaryote community.
Gene,
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Kawachi, M., Nakayama, T., Kayama, M., Nomura, M., Miyashita, H., Bojo, O., Rhodes, L., Sym, S., Pienaar, R. N., Probert, I., Inouye, I., Kamikawa, R.
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Two different rickettsial bacteria invading Volvox carteri.
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Kawafune, K., Hongoh, Y., Hamaji, T., Nozaki, H.
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Molecular identification of rickettsial endosymbionts in the non-phagotrophic Volvocalean green algae.
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Ultrastructure of the rickettsial endosymbiont "MIDORIKO" in the green alga Carteria cerasiformis as revealed by high-pressure freezing and freeze-substitution fixation.
Protoplasma,
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Potential of a green alga Botryococcus braunii for simultaneous water purification and biofuel production under open-air condition.
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Determining the optimal cultivation strategy for microalgae for biodiesel production using flow cytometric monitoring and mathematical modeling.
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Coelastrella astaxanthina sp. nov. (Sphaeropleales, Chlorophyceae), a novel microalga isolated from an asphalt surface in midsummer in Japan.
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Comparative physiology and biochemistry and taxonomic assignment of the Chlorella (Chlorophyceae) strains of the Culture Collection of the University of Texas at Austin.
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EEF2 analysis challenges the monophyly of Archaeplastida and Chromalveolata.
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Multigene analyses of photosynthetic euglenoids and new family, Phacaceae (Euglenales).
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Evoluation of a cyanobacterium, Nostoc sp. HK-01, as food material for space agriculture on Mars.
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Keywords: Bloom control; cyanobacteria; fusaricidin; Microcystis; Paenibacillus polymyxa Strain(s): 23, 94 PubMed: 30394041 DOI: 10.4014/jmb.1804.04031 |
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Specimen preparation for cryogenic coherent X-ray diffraction imaging of biological cells and cellular organelles by using the X-ray free-electron laser at SACLA.
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Kobayashi, A., Takayama, Y., Hirakawa, T., Okajima, K., Oide, M., Oroguchi, T., Inui, Y., Yamamoto, M., Matsunaga, S., Nakasako, M.
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Common architectures in cyanobacteria Prochlorococcus cells visualized by X-ray diffraction imaging using X-ray free electron laser.
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Thermal expansion behavior of hydrate paramylon in the low-temperature region.
Carbohydr. Polym.,
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In vivo antioxidant role of astaxanthin under oxidative stress in the green alga Haematococcus pluvialis.
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Kobayashi, M., Hatta, K., Sugai, M.
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Endopolyploidy in Chlorella.
Arch. Mikrobiol.,
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Kobayashi, M., Hirai, N., Kurimura, Y., Ohigashi, H., Tsuji, Y.
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Abscisic acid-dependent algal morphogenesis in the unicellular green alga Haematococcus pluvialis.
Plant Growth Regulation,
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Keywords: abscisic acid; active oxygen; carotenoid; cyst formation; drought stress; Haematococcus pluvialis Strain(s): 144 DOI: 10.1023/A:1005862809711 |
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Kobayashi, M., Kakizono, T., Nagai, S.
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Astaxanthin production by a green alga, Haematococcus pluvialis accompanied with morphological changes in acetate media.
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Appl. Environ. Microbiol.,
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Kobayashi, M., Kakizono, T., Nagai, S.
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Photo-dependent astaxanthin biosynthesis in a green alga, Haematococcus pluvialis.
Seibutsu-Kôgaku,
71,
233-237 (in Japanese with English summary).
Strain(s): 144 |
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Kobayashi, M., Kakizono, T., Nishio, N., Nagai, S.
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Effects of light intensity, light quality, and illumination cycle on astaxanthin formation in a green alga, Haematococcus pluvialis.
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Strain(s): 144 DOI: 10.1016/0922-338X(92)90271-U |
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Kobayashi, M., Kakizono, T., Nishio, N., Nagai, S., Kurimura, Y., Tsuji, Y.
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Antioxidant role of astaxanthin in the green alga Haematococcus pluvialis.
Appl. Microbiol. Biotechnol.,
48,
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Strain(s): 144 DOI: 10.1007/s002530051 |
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Kobayashi, M., Kakizono, T., Yamaguchi, K., Nishio, N., Nagai, S.
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Growth and asta-xanthin formation of Haematococcus pluvialis in heterotrophic and mixotrophic conditions.
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Strain(s): 144 |
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Kobayashi, M., Kurimura, Y., Kakizono, T., Nishio, N., Tsuji, Y.
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Morphological changes in the life cycle of the green alga Haematococcus pluvialis.
J. Ferment. Bioeng.,
84,
94-97.
Keywords: astaxanthin; encystment; germination; Haematococcus pluvialis; life cycle; maturation Strain(s): 144 DOI: 10.1016/S0922-338X(97)82794-8 |
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Kobayashi, M., Kurimura, Y., Sakamoto, Y., Tsuji, Y.
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Selective extraction of astaxanthin and chlorophyll from the green alga Haematococcus pluvialis.
Biotechnol. Tech.,
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Kobayashi, M., Kurimura, Y., Tsuji, Y.
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Light-independent, astaxanthin production by the green microalga Haematococcus pluvialis under salt stress.
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Kobayashi, M., Okada, T.
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Protective role of astaxanthin against u.v.-B irradiation in the green alga Haematococcus pluvialis.
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Keywords: antioxidant; astaxanthom; Haematococcus pluvialis oxidative stress; u.v.-B; Strain(s): 144 DOI: 10.1023/A:100564960983 |
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Kobayashi, M., Todoroki, Y., Hirai, N., Kurimura, Y., Ohigashi, H., Tsuji, Y.
1998
Biological activities of abscisic acid analogs in the morphological change of the green alga Haematococcus pluvialis.
J. Ferment. Bioeng.,
85,
529-531.
Keywords: abscisic acid; astaxanthin; carotenogenesis; drought stress; encystment; plant hormone; Haematococcus pluvialis Strain(s): 144 DOI: 10.1016/S0922-338X(98)80076-7 |
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Kobayashi, T. Takahara, M., Miyagishima, S, Kuroiwa, H., Sasaki, N., Ohta, N., Kuroiwa, T.
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Detection and localization of a chloroplast-encoded HU-like protein that may organize chloroplast nucleoids.
Plant Cell,
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Strain(s): 3377 PubMed: 12119376 DOI: 10.1105/tpc.002717 |
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Tetrapyrole signal as a cell cycle coordinator from organelle to nuclear DNA replication in plant cells.
Proc. Nati. Acad. Sci. U. S. A.,
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Eukaryotic components remodeled chloroplast nucleoid organization during the green plant evolution.
Genome Biol. Evol.,
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Kodani, S.
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Studies on antialgal compounds of algicidal bacteria.
PhD thesis, University of Tokyo, Japan,
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Strain(s): 19 |
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Kodani, S., Imoto, A., Mitsutani, A., Murakami, M.
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Isolation and identification of the antialgal compound, harmane (1-methyl-B-carboline), produced by the algicidal bacterium, Pseudomonas sp. K44-1.
J. Appl. Phycol.,
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Keywords: Algicidal bacteria; Antialgal compound; Cyanobacteria; Harmane; Pseudomonas sp.; Water bloom Strain(s): 19, 23, 102, 227, 299, 446, 506 DOI: 10.1023/A:1019533414018 |
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Kodani, S., Ishida, K., Murakami, M.
1998
Aeruginosin 103-A, a thrombin inhibitor from the cyanobactrium Microcystis viridis.
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Kodani, S., Ishida, K., Murakami, M.
1998
Dehydroradiosumin, a trypsin inhibitor from the cyanobacterium Anabaena cylindrica.
J. Nat. Prod.,
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1999
Occurrence and identification of UDP-N-acetylmuramyl-pentapeptide from the cyanobacterium Anabaena cylindrica.
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Keywords: cyanobacterium; UDP-N-acetylmuramyl-pentapeptide; peptidoglycan Strain(s): 19 PubMed: 10427714 DOI: 10.1111/j.1574-6968.1999.tb13678.x |
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Biochemical characterization of allene oxide synthases from the liverwort Marchantia polymorpha and green microalgae Klebsormidium flaccidum provides insight into the evolutionary divergence of the plant CYP74 family.
Planta,
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Keywords: Allene oxide synthase; Plant evolution; CYP74; Hydroperoxide lyase; C8 volatiles Strain(s): 2285 PubMed: 26105654 DOI: 10.1007/s00425-015-2355-8 |
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Koga, T., Arasaki, T., Tanaka, T., Ueda, S.
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Studies on cell fusion of microalgae, part 2 protoplast induction and regeneration of Chlorella.
Annu. Rep. Kumamoto Kogyo Univ.,
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Strain(s): 685, 2163, 2189 |
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Koga, T., Arasaki, T., Tanaka, T., Ueda, S.
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Studies on cell fusion of microalgae, part 3 interspecific cell fusion of Chlorella.
Annu. Rep. Kumamoto Kogyo Univ.,
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Kohata, K., Watanabe, M.
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The use of a controlled experimental ecosystem (Microcosm) in studies of mechanism of red tide outbreaks (II) - Growth of Heterosigma akashiwo, red tide flagellate, in Microcosm.
Res. Rep. Natl. Inst. Environ. Stud.,
No. 63,
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Strain(s): 6 |
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Kohata, K., Watanabe, M.
1986
Synchronous division and the pattern of diel vertical migration of Heterosigma akashiwo (Hada) Hada (Raphidophyceae) in a laboratory culture tank.
J. Exp. Mar. Biol. Ecol.,
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Keywords: cell division; culture tank; DCMU-induced fluorescence; Heterosigma akashiwo; vertical migration Strain(s): 6 DOI: 10.1016/0022-0981(86)90163-2 |
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Kohata, K., Watanabe, M.
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The use of a controlled experimental ecosystem (Microcosm) in studies of mechanism of red tide outbreaks (V) - Growth and cell volume change of Heterosigma akashiwo, a red tide flagellate.
Res. Rep. Natl. Inst. Environ. Stud.,
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Strain(s): 6 |
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Kohata, K., Watanabe, M.
1987
The use of a controlled experimental ecosystem (Microcosm) in studies of mechanism of red tide outbreaks (VI) - Diurnal changes of C/N ratio and distribution of chloroplast pigments in the culture of Chattonella antiqua, a red tide flagellate.
Res. Rep. Natl. Inst. Environ. Stud.,
No. 110,
67-77 (in Japanese with English summary).
Strain(s): 1 |
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Kohata, K., Watanabe, M.
1987
The use of a controlled experimental ecosystem (Microcosm) in studies of mechanism of red tide outbreaks (VII) - Growth and its mathematical model of Heterosigma akashiwo, a red tide flagellate, in light-limited synchronous cultures.
Res. Rep. Natl. Inst. Environ. Stud.,
No. 110,
79-88 (in Japanese with English summary).
Strain(s): 6 |
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Kohata, K., Watanabe, M.
1988
Diel changes in the composition of photosynthetic pigments and cellular carbon and nitrogen in Chattonella antiqua (Raphidophyceae).
J. Phycol.,
24,
58-66.
Keywords: carotenoids; cellular carbon; Chattonella antiqua; chlorophyll; diel change; laboratory culture tank; light-dark cycles Strain(s): 1 DOI: 10.1111/j.1529-8817.1988.tb04456.x |
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Kohata, K., Watanabe, M.
1989
Diel changes in the composition of photosynthetic pigments and cellular carbon and nitrogen in Pyramimonas parkeae (Prasinophyceae).
J. Phycol.,
25,
377-385.
Keywords: carotenoids; cellurar carbon; chlorophyll; diel change; laboratory culture tank; light-dark cycles; loroxanthin dodecenoate; Pyremimonas parkeae Strain(s): 254 DOI: 10.1111/j.1529-8817.1989.tb00134.x |
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Kohata, K., Watanabe, M. M., Nakamura, Y., Watanabe, M.
1982
Growth and phosphate uptake kinetics in Olisthodiscus luteus: grown on synchronized batch cultures.
Res. Rep. Natl. Inst. Environ. Stud.,
No. 30,
95-111 (in Japanese with English summary).
Strain(s): 6 |
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Kohata, K., Watanabe, M., Yamanaka, K.
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Highly sensitive determination of photosynthetic pigments in marine in situ samples by high-performance liquid chromatography.
J. Chromatogr. A
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Strain(s): 6, 7, 254, 323, 353 DOI: 10.1016/0021-9673(91)80118-Z |
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Koike, H., Shibata, M., Yasutomi, K., Kashino, Y., Satoh, K.
2000
Identification of photosystem I components from a glaucocystophyte, Cyanophora paradoxa: The PsaD protein has an N-terminal stretch homologous to higher plants.
Photosynth. Res.,
65,
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Keywords: Cyanophora paradoxa; glaucocystophyte; light harvesting complex; photosystem I; PsaD; PsaL Strain(s): 547 DOI: 10.1023/A:1010734912776 |
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Kojima, E., Yamaguchi, Y.
1988
Photoproduction of hydrogen by adapted cells of Chlorella pyrenoidosa.
J. Ferment. Technol.,
66,
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Strain(s): 685 DOI: 10.1016/0385-6380(88)90124-0 |
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Komatsu, H., Wada, K., Kanjoh, T., Miyashita, H., Sato, M., Kawachi, M., Kobayashi, M.
2016
Unique chlorophylls in picoplankton Prochlorococcus sp. “Physicochemical properties of divinyl chlorophylls, and the discovery of monovinyl chlorophyll b as well as divinyl chlorophyll b in the species Prochlorococcus NIES-2086.”
Photosynth. Res.,
130,
445-467.
Keywords: Chlorophyll; Divinyl chlorophyll; Pheophytin; Photosynthesis; Prochlorococcus Strain(s): 2086, 2087, 2884, 3376 PubMed: 27334004 DOI: 10.1007/s11120-016-0283-5 |
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Komor, E., Cho, B.-H., Kraus, M.
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The occurrence of the glucose-inducible transport systems for glucose, proline, and arginine in different species of Chlorella.
Botanica Acta,
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Keywords: Amino acid transport; induction by glucose; Chlorella; classification Strain(s): 687, 2150 DOI: 10.1111/j.1438-8677.1988.tb00051.x |
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Kondo, F., Ikai, Y., Oka, H., Ishikawa, N., Watanabe, M. F., Watanabe, M., Harada, K., Suzuki, M.
1992
Separation and identification of microcystins in cyanobacteria by frit-fast atom bombardment liquid chromatography / mass spectrometry.
Toxicon,
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Strain(s): 1213 PubMed: 1529459 DOI: 10.1016/0041-0101(92)90865-3 |
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Kondo, R., Kagiya, G., Hiroishi, S., Watanabe, M.
2000
Genetic typing of a bloom-forming cyanobacterial genus Microcystis in Japan using 16S rRNA gene sequence analysis.
Plankton Biol. Ecol.,
47,
1-6.
Keywords: genetic typing; 16S rDNA; Microcystis; cyanobacteria; phylogenetic analysis Strain(s): 87, 88, 89, 90, 91, 98, 99, 100, 101, 102, 104, 105, 106, 108, 109, 110, 111, 112, 298, 299, 604, 1055, 1061, 1068, 1076, 1090, 1091, 1105, 1122, 1142, 1164 |
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Kondo, R., Kagiya, G., Hiroishi, S., Watanabe, M., Hata, Y.
1999
Rapid DNA extraction from a bloom-forming cyanobacterium.
Microbes Environ.,
14,
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Keywords: DNA extraction; PCR; Microcystis; cyanobacteria Strain(s): 87, 88, 89, 90, 91, 98, 99, 100, 101, 102, 104, 105, 106, 108, 109, 110, 111, 112, 298, 299, 604, 1055, 1061, 1068, 1076, 1090, 1091, 1105, 1122, 1142, 1164 DOI: 10.1264/jsme2.14.157 |
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Kondo, R., Kagiya, G., Komura, M., Yuki, Y., Hiroishi, S., Watanabe, M.
2000
Molecular taxonomy of a bloom-forming cyanobacterial genus Microcystis.
Bull. Plankton Soc. Japan,
47,
25-33 (in Japanese with English summary).
Keywords: cyanobacteria; Microcystis; bacterial criteria; molecular analysis Strain(s): 6, 87, 88, 89, 90, 91, 98, 99, 100, 101, 102, 104, 105, 106, 108, 109, 110, 111, 112, 298, 299, 604, 1055, 1061, 1068, 1076, 1090, 1091, 1105, 1122, 1142, 1164 |
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Kondo, R., Kagiya, G., Yuki, Y., Hiroishi, S., Watanabe, M.
1998
Taxonomy of a bloom-forming cyanobacterial genus Microcystis.
Nippon Suisan Gakkaishi,
64,
291-292 (in Japanese with English title).
Strain(s): 87, 88, 89, 90, 91, 98, 99, 100, 101, 102, 104, 105, 106, 107, 108, 109, 110, 111, 112, 298, 299, 604 |
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Kondo, R., Komura, M., Hiroishi, S., Hata, Y.
1998
Detection and 16S rDNA sequence analysis of a bloom-forming cyanobacterial genus Microcystis.
Fish. Sci.,
64,
840-841.
Keywords: Microcystis; 16S rDNA; PCR Strain(s): 107, 112 DOI: 10.2331/fishsci.64.840 |
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Kondo, R., Okamura, T.
2017
Growth and grazing kinetics of the facultative anaerobic nanoflagellate, Suigetsumonas clinomigrationis.
Microbes Environ.,
32,
80-83.
Keywords: anaerobic flagellate; growth rate; ingestion rate; Lake Suigetsu Strain(s): 3647 PubMed: 28190796 DOI: 10.1264/jsme2.ME16113 |
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Kondo, R., Yoshida, T., Yuki, Y., Hiroishi, S.
2000
DNA-DNA reassociation among a bloom-forming cyanobacterial genus, Microcystis.
Int. J. Syst. Evol. Microbiol.,
50,
767-770.
Keywords: DNA hybridization; DNA G+C content; cyanobacteria; Microcystis Strain(s): 87, 89, 98, 102, 104, 111, 112, 298, 604 PubMed: 10758887 DOI: 10.1099/00207713-50-2-767 |
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Kong, F., Yamasaki, T., Kurniasih, S. D., Hou, L., Li, X., Ivanova, N., Okada, S., Ohama, T.
2015
Robust expression of heterologous genes by selection marker fusion system in improved Chlamydomonas strains.
Biotech. Bioeng.,
120,
239-245.
Keywords: Transgene silencing; Position effect; Squalene synthase-like gene; Botryococcus braunii; Methyltransferase gene Strain(s): 2235 PubMed: 25660568 DOI: 10.1016/j.jbiosc.2015.01.005 |
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Konno, R., Wakabayashi, A.
1987
Effects of chemical substance on the growth of algae [Sôrui no zôsyoku ni oyobosu kagakubusshitsu no eikyô].
Tokyo-to Kankyô Kagaku Kenkyûjo Nenpô. 1987,
4 pp. (in Japanese).
Strain(s): 35 |
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Kooistra, W. H. C. F., Sarno, D., Balzano, S., Gu, H., Andersen, R. A., Zingone, A.
2008
Global diversity and biogeography of Skeletonema species (Bacillariophyta).
Protist,
159,
177-193.
Keywords: biogeography; cryptic species; distribution; LSU rDNA; phytoplankton; Skeletonema costatum Strain(s): 16, 17, 223, 323, 324 PubMed: 18042429 DOI: 10.1016/j.protis.2007.09.004 |
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Koskenniemi, K., Lyra, C., Rajaniemi-Wacklin, P., Jokela, J., Sivonen, K.
2007
Quantitative real-time PCR detection of toxic Nodularia cyanobacteria in the Baltic Sea.
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Strain(s): 81, 89, 102 PubMed: 17277219 DOI: 10.1128/AEM.02746-06 |
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Kotzabasis, K., Schuering, M., Senger, H.
1989
Occurrence of protochlorophyll and its phototransformation to chlorophyll in mutant C-2A' of Scenedesmus obliquus.
Physiol. Plant.,
75,
221-226.
Keywords: green algae; phototransformation; protochlorophyllide; protochlorophyllide reductase; Scenedesmus obliquus Strain(s): 2280 DOI: 10.1111/j.1399-3054.1989.tb06172.x |
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Koumura, Y., Suzuki, T., Yoshikawa, S., Watanabe, M., Iseki, M.
2004
The origin of photoactivated adenylyl cyclase (PAC), the Euglena blue-light receptor: phylogenetic analysis of orthologues of PAC subunits from several euglenoids and trypanosome-type adenylyl cyclases from Euglena gracilis.
Photochem. Photobiol. Sci.,
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Strain(s): 48, 381 PubMed: 5170488 DOI: 10.1039/b316075k |
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Krausfeldt, L. E., Farmer, A. T., Castro, H. F., Boyer, G. L., Campagna, S. R., Wilhelm, S. W.
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Nitrogen flux into metabolites and microcystins changes in response to different nitrogen sources in Microcystis aeruginosa NIES‐843.
Environ. Microbiol.,
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Strain(s): 843 PubMed: 32338427 DOI: 10.1111/1462-2920.15032 |
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Krienitz, L., Bock, C., Nozaki, H., Wolf, M.
2011
SSU rRNA gene phylogeny of morphospecies affiliated to the bioassay alga "Selenastrum capricornutum" recovered the polyphyletic origin of crescent-shaped Chlorophyta.
J. Phycol.,
47,
880-893.
Keywords: Kirchneriella; Neocystis mucosa sp. nov..; Nephrochlamys; Raphidocelis; Rhombocystis; Selenastrum; SSU rRNA gene phylogeny; taxonomy; Tetranephris; ultrastructure Strain(s): 2708, 2709, 2710, 2711, 2712, 2713, 2714 PubMed: 27020023 DOI: 10.1111/j.1529-8817.2011.01010.x |
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Krivina, E. S., Temraleeva, A. D.
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Identification problems and cryptic diversity of Chlorella-clade microalgae (Chlorophyta).
Microbiology,
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Keywords: microalgae; morphology; ecology; phylogeny; 18S−ITS1−5.8S−ITS2 fragments; polyphasic approach Strain(s): 2167, 2173, 4032, 4034 DOI: 10.1134/S0026261720060107 |
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Krupnik, T., Kotabová, E., van Bezouwen, L. S., Mazur, R., Garstka, M., Nixon, P. J., Barber, J., Kaňa, R., Boekema, E. J., Kargul, J.
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A reaction center-dependent photoprotection mechanism in a highly robust photosystem II from an extremophilic red alga, Cyanidioschyzon merolae.
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Strain(s): 1332 DOI: 10.1074/jbc.M113.484659 |
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Krupnik, T., Wasilewska, W., Drożak, A., Romanowska, E., Zienkiewicz, M.
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Application of chloroplast promoters of Cyanidioschyzon merolae for exogenous protein expression.
Algae,
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Keywords: chloroplast promoters; chloroplast transformation; Cyanidioschyzon merolae Strain(s): 1332 DOI: 10.4490/algae.2018.33.12.5 |
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Kuang, X., Peng, L., Chen, A., Xeng, Q., Luo, S., Shao, J.
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Enhancement mechanisms of copper(II) adsorption onto kaolinite by extracellular polymeric substances of Microcystis aeruginosa (cyanobacterium).
Int. Biodeterior. Biodegrad.,
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Keywords: Microcystis aeruginosa; Extracellular polymeric substances; Copper(II); Adsorption kinetics; Adsorption isotherm Strain(s): 843 DOI: 10.1016/j.ibiod.2018.12.009 |
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Kubo, T., Abe, J., Saito, T., Matsuda, Y.
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Genealogical relationships among laboratory strains of Chlamydomonas reinhardtii as inferred from matrix metalloprotease genes.
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Kubo, T., Kato, N., Hosoya, K., Kaya, K.
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Effective determination method for a cyanobacterial neurotoxin, β-N-methylamino-L-alanine.
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Feeding by the harmful phototrophic dinoflagellate Takayama tasmanica (Family Kareniaceae).
Harmful Algae,
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Genetic diversity and molecular phylogeny of Planktothrix (Oscillatoriales, cyanobacteria) strains from China.
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Effects of temperature on life history traits of Eodiaptomus japonicus (Copepoda: Calanoida) from Lake Biwa (Japan).
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Int. Biodeterior. Biodegrad.,
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A comparison of the mussel Anodonta woodiana's acute physiological responses to different algae diets.
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Extensive dinoflagellate phylogenies indicate infrequent marine–freshwater transitions.
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Diversity and oceanic distribution of prasinophytes clade VII, the dominant group of green algae in oceanic waters.
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Development of models of threshold and efficient algal densities for larval and juvenile tilapia Oreochromis niloticus on raw Spirulina.
Aquaculture,
285,
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Keywords: assimilation; 14C labeling; CERAS (closed ecological recirculating aquaculture system); density; ingestion; Spirulina; Oreochromis niloticus Strain(s): 39 DOI: 10.1016/j.aquaculture.2008.08.039 |
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Lu, J., Takeuchi, T.
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Spawning and egg quality of the tilapia Oreochromis niloticus fed solely on raw Spirulina throughout three generations.
Aquaculture,
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Keywords: Closed ecological recirculating aquaculture system (CERAS); egg quality; larval quality; Oreochromis niloticus; parent; progeny; reproduction; spawn; Spirulina platensis Strain(s): 39 DOI: 10.1016/j.aquaculture.2003.12.027 |
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Lu, J., Takeuchi, T., Satoh, H.
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Ingestion and assimilation of three species of freshwater algae by larval tilapia Oreochromis niloticus.
Aquaculture,
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Lu, J., Takeuchi, T., Satoh, H.
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Ingestion, assimilation and utilization of raw Spirulina by larval tilapia Oreochromis niloticus during larval development.
Aquaculture,
254,
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Evaluation of filamentous heterocystous cyanobacteria for integrated pig-farm biogas slurry treatment and bioenergy production.
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A novel fed-batch strategy to boost cyst cells production based on the understanding of intracellular carbon and nitrogen metabolism in Haematococcus pluvialis.
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Distribution and evolution of peroxisomes in alveolates (Apicomplexa, Dinoflagellates, Ciliates).
Genome Biol. Evol.,
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Hidden diversity of eukaryotic plankton in the soda lake Nakuru, Kenya, during a phase of low salinity revealed by a SSU rRNA gene clone library.
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Accumulation and elimination of Microcystins in freshwater clam Corbicula leana under laboratory conditions, assessment of risks to humans.
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Molecular characterization of planktic cyanobacteria of Anabaena, Aphanizomenon, Microcystis and Planktothrix genera.
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LSU rDNA based RFLP assays for the routine identification of Gambierdiscus species.
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Accumulation, assimilation and growth inhibition of copper on freshwater alga (Scenedesmus subspicatus 86.81 SAG) in the presence of EDTA and fulvic acid.
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Mortalities of sea-cage salmon (Oncorhynchus tshawytscha) due to a bloom of Pseudochattonella verruculosa (Dictyochophyceae) in Queen Charlotte Sound, New Zealand.
Harmful Algae,
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The presence of toxic and non-toxic Cyanobacteria in the sediments of the Limpopo River Basin: Implications for human health.
Toxins,
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Control by ammonium ion of the change from step-up to step-down photophobically responding cells in the flagellate alga Euglena gracilis.
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Phycologia,
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Keywords: Chloromonas; Evolution; Green algae; Hydrophobicity of RBCS helices; Pyrenoid; Pyrenoid loss; Rubisco small subunit (RBCS) Strain(s): 144, 424, 425, 2207, 2212, 2215, 2242, 2243, 2499, 3753, 4284 PubMed: 33514317 DOI: 10.1186/s12862-020-01733-1 |
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Matumura, H., Muto, S., Miyachi, S.
1982
Light-induced conversion of NAD+ to NADP+ in Chlorella cells.
Biochim. Biophys. Acta,
679,
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Strain(s): 2160, 2161 DOI: 10.1016/0005-2728(82)90300-0 |
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Mazalová, P., Šarhanová, P., Ondřej, V., Poulíčková, A.
2011
Quantificaion of DNA content in freshwater microalgae using flow cytometry: a modified protocol for selected green microalgae.
Fottea,
11,
317-328.
Keywords: DNA content; flow cytometry; desmids; microalgae; standards; Micrasterias pinnatifida Strain(s): 783 DOI: 10.5507/fot.2011.030 |
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McDonald, S. M., Plant, J. N. Worden, A. Z.
2010
The mixed lineage nature of nitrogen transport and assimilation in marine eukaryotic phytoplankton: a case study of Micromonas.
Mol. Biol. Evol.,
27,
2268-2283.
Keywords: nitrogen; Micromonas; Ostreococcus; green algae; green lineage; quantitative PCR; genomics; phylogeny Strain(s): 2672 PubMed: 20457585 DOI: 10.1093/molbev/msq113 |
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McKay, R. M., Gibbs, S. P.
1989
Immunocytochemical localization of ribulose 1,5-bisphosphate carboxylase/oxygenase in light-limited and light-saturated cells of Chlorella pyrenoidosa.
Protoplasma,
149,
31-37.
Keywords: pyrenoid; ribulose 1,5-bisphosphate carboxylase/oxygenase; Chlorella pyrenoidosa; immunocytochemistry Strain(s): 687, 2142 |
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McKindles, K. M., Manes, M. A., DeMarco, J. R., McClure, A., McKay, R. M., Davis, T. W., Bullerjahn, G. S.
2020
Dissolved microcystin release coincident with lysis of a Microcystis-dominated bloom in western Lake Erie attributed to a novel cyanophage.
Appl. Environ. Microbiol.,
86,
e01397-20.
Strain(s): 843 PubMed: 32859600 DOI: 10.1128/AEM.01397-20 |
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Mcmillan, R.
1957
Morphogenesis and polymorphism of Ankistrodesmus spp.
J. Gen. Microbiol.,
17,
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Strain(s): 2190, 2194, 2195 DOI: 10.1099/00221287-17-3-658 |
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Meglič, A., Pecman, A., Rozina, T., Leštan, D., Sedmak, B.
2016
Electrochemical inactivation of cyanobacteria and microcystin degradation using a boron-doped diamond anode - A potential tool for cyanobacterial bloom control.
J. Environ. Sci.,
53,
248-261.
Keywords: Cyanobacterial bloom control; Boron-doped diamond anode; Electro-oxidation; Microcystin degradation; Protein phosphatase-1 inhibition; Water remediation Strain(s): 843 PubMed: 28372749 DOI: 10.1016/j.jes.2016.02.016 |
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Meriluoto, J., Codd, G. A. (eds.)
2005
TOXIC: cyanobacterial monitoring and cyanotoxin analysis.
Acta Acad. Aboensis, ser, B,
Vol. 65(1),
149 pp.
Strain(s): 107 |
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Meriluoto, J., Karlsson, K., Spoof, L.
2004
High-throughput screening of ten microcystins and nodularins, cyanobacterial peptide hepatotoxins, by reversed-phase liquid chromatography-electrospray ionization mass spectrometry.
Chromatographia,
59,
291-298.
Keywords: columun liquid chromatography; mass spectrometry detection; microcystins and nodularins; cyanobacteria; toxins Strain(s): 107 DOI: 10.1365/s10337-003-0163-y |
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Merola, A., Castaldo, R., De Luca, P., Gambardella, R., Musacchio, A., Taddei, R.
1981
Revision of Cyanidium caldarium. Three species of acidophilic algae.
Giorn Bot. Ital.,
115,
189-195.
Strain(s): 550 DOI: 10.1080/11263508109428026 |
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Metcalf, J. S., Bell, S. G., Codd, G. A.
2000
Production of novel polyclonal antibodies against the cyanobacterial toxin microcystin-LR and their application for the detection and quantification of microcystins and nodularin.
Water Res.,
34,
2761-2769.
Keywords: cyanobacteria; blue-green algae; microcystin; toxins; antibodies; immunoassays Strain(s): 42, 102, 103, 104, 595 DOI: 10.1016/S0043-1354(99)00429-7 |
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Miao, H., Beardall, J., Gao, K.
2018
Calcification moderates the increased susceptibility to UV radiation of the coccolithophorid Gephryocapsa oceanica grown under elevated CO2 concentration: Evidence based on calcified and non-calcified cells.
Photochem. Photobiol.,
94,
994-1002.
Strain(s): 1318 PubMed: 29701244 DOI: 10.1111/php.12928 |
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Miao, M., Li, Z., Hwang, E.-A., Kim, H.-K., Lee, H., Kim, B.-H.
2020
Two new benthic diatoms of the genus Achnanthidium (Bacillariophyceae) from the Hangang River, Korea.
Diversity-Basel,
12,
285 (article ID).
Keywords: Achnanthidium; freshwater; molecular phylogeny; morphology; rbcL; SSU; taxonomy Strain(s): 372, 407, 410, 411, 412, 413, 414 DOI: 10.3390/d12070285 |
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