Search Reference

Abd Karim, F. F., Mohamad, S. E., Shaza, E. M., Iwamoto, K. 2021 Initial study on the growth of Haematococus pluvialis for astaxanthin production. IOP Conf. Ser.: Earth Environ. Sci., 765, 012064 (article ID).
Strain(s): 144 
DOI: 10.1088/1755-1315/765/1/012064
Abe, J., Hirano, N., Komiya, A., Kanda, N., Fujiwara, A., Hori, S., Tsuchikane, Y., Sekimoto, H. 2016 Preparation of knockdown transformants of unicellular charophycean alga, Closterium peracerosum-strigosum-littorale complex. Bio-protocol, 6, e1813 (article ID).
Keywords: Knockdown; Alga; Closterium; Charophycean; Transformation
Strain(s): 6768 
DOI: 10.21769/BioProtoc.1813
Abe, J., Hiwatashi, Y., Ito, M., Hasebe, M., Sekimoto, H. 2008 Expression of exogenous genes under the control of endogenous HSP70 and CAB promoters in the Closterium peracerosum–strigosum–littorale complex. Plant Cell Physiol., 49, 625-632.
Strain(s): 68 
PubMed: 18308758
DOI: 10.1093/pcp/pcn039
Abe, J., Hori, S., Sato, M., Sekimoto, H. 2016 Concanavalin A disrupts the release of fibrous material necessary for zygote formation of a unicellular charophycean alga, Closterium peracerosum-strigosum-littorale complex. Front. Plant Sci., 7, 1040 (article ID).
Keywords: charophycean; Closterium; conjugation; gamete; Concanavalin A (Con A); sexual reproduction
Strain(s): 6768 
PubMed: 27468295
DOI: 10.3389/fpls.2016.01040
Abe, J., Hori, S., Tsuchikane, Y., Kitao, N., Kato, M., Shiraiwa, H. 2011 Stable nuclear transformation of the Closterium peracerosum–strigosum–littorale complex. Plant Cell Physiol., 52, 1676-1685.
Strain(s): 6768 
PubMed: 21804095
DOI: 10.1093/pcp/pcr103
Abe, J., Kubo, T., Takagi, Y., Saito, T., Miura, K., Fukuzawa, H., Matsuda, Y. 2004 The transcriptional program of synchronous gametogenesis in Chlamydomonas reinhardtii. Curr. Genet., 46, 304-315.
Strain(s): 2235 
PubMed: 15459796
DOI: 10.1007/s00294-004-0526-4
Abe, M., Okuda, Y., Hashimoto, S. 2022 Effects of light intensity on the production of VSLs from the marine diatom Ditylum brightwellii. J. Atmos. Chem., 79, 1–16.
Keywords: Chloroform; Bromoform; Halogenated hydrocarbons; Ditylum; Phytoplankton; Light dependence
Strain(s): 350 
DOI: 10.1007/s10874-021-09426-9
Abe, T., Tsuzuki, M., Kaplan, A., Miyachi, S. 1987 Transport and fixation of inorganic carbon during photosynthesis in the cells of Anabaena grown under ordinary air. II. Effect of sodium concentration during growth on the induction of active transport system for IC. Plant Cell Physiol., 28, 671-677.
Keywords: Anabaena variabilis; CO2 accumulation; cyanobacterial growth; photosynthesis; sodium
Strain(s): 2093 
DOI: 10.1093/oxfordjournals.pcp.a077343
Abe, T., Tsuzuki, M., Miyachi, S. 1987 Transport and fixation of inorganic carbon during photosynthesis in the cells of Anabaena grown under ordinary air. III. Some characteristics of the HCO3-transport system in cells grown under ordinary air. Plant Cell Physiol., 28, 867-874.
Keywords: Anabaena; carbonic anhydrase; IC transport; photosynthesis; sodium
Strain(s): 2093 
DOI: 10.1093/oxfordjournals.pcp.a077368
Abe, T., Tsuzuki, M., Miyachi, S. 1987 Transport and fixation of inorganic carbon during photosynthesis of Anabaena grown under ordinary air. I. Active species of inorganic carbon utilized for photosynthesis. Plant Cell Physiol., 28, 273-281.
Keywords: Anabaena; carbon dioxide fixation; cyanobacterium; IC transport photosynthesis
Strain(s): 2093 
DOI: 10.1093/oxfordjournals.pcp.a077293
Abeynayaka, HDL., Asaeda, T., Rashid, MH. 2018 Effects of elevated pressure on Pseudanabaena galeata Böcher in varying light and dark environments. Environ. Sci. Pollut. Res., 25, 21224–21232.
Keywords: Cyanobacteria; Hydrostatic pressure; Pseudanabaena galeata Böcher; Prolonged darkness; Chlorophyll-a; Cell concentration
Strain(s): 512 
PubMed: 29779078
DOI: 10.1007/s11356-018-2218-5
Abram, M., Białek, R., Szewczyk, S., Karolczak, J., Gibasiewicz, K., Kargul, J. 2020 Remodeling of excitation energy transfer in extremophilic red algal PSI-LHCI complex during light adaptation. Biochim. Biophys. Acta-Bioenerg., 1861, 148093 (article ID).
Keywords: Photosystem I; Light harvesting complex I; Time-resolved fluorescence; Extremophilic red alga Cyanidioschyzon merolae; Light adaptation; Red chlorophylls
Strain(s): 1332 
PubMed: 31669460
DOI: 10.1016/j.bbabio.2019.148093
Agarkova, I. V., Lane, L. C., Dunigan, D. D., Quispe, C. F., Duncan, G. A., Milrot, E., Minsky, A., Esmael, A., Ghosh, J. F., Van Etten, J. L. 2021 Identification of a chlorovirus PBCV-1 protein involved in degrading the host cell wall during virus infection. Viruses-Basel, 13, 782 (article ID).
Keywords: Chlorella; Phycodnaviridae; chlorovirus; PBCV-1; algal lytic activity; cell wall degrading activity; alginate-like lyase
Strain(s): 25402541 
PubMed: 33924931
DOI: 10.3390/v13050782
Águila, B., Alcántara-Hernández, R. J., Montejano, G., López-Martínez, R., Falcón, L. I., Becerra-Absalón, I. 2021 Cyanobacteria in microbialites of Alchichica Crater Lake: a polyphasic characterization. Eur. J. Phycol., , 428-443.
Keywords: Clone libraries; depth gradient; microscopy; NGS library; oxyphotobacteriav; stromatolites; taxonomy
Strain(s): 439343944395439643974398 
DOI: 10.1080/09670262.2020.1853815
Ahamefule, S. C., Ogbonna, J. C., Moneke, A. N., Ossai, N. I. 2018 Application of photosynthetic microalgae as efficient pH bio-stabilizers and bio-purifiers in sustainable aquaculture of Clarias gariepinus (African catfish) fry. Nig. J. Biotech., 35, 139-150.
Keywords: nitrogen removal; ammonia; nitrite; fishery; fish pond
Strain(s): 93 
DOI: 10.4314/njb.v35i2.17
Aida, T. M., Nonaka, T., Fukuda, S., Kujiraoka, H., Kumagai, Y., Maruta, R., Ota, M., Suzuki, I., Watanabe, M. M., Inomata, H., Smith Jr., R. L. 2016 Nutrient recovery from municipal sludge for microalgae cultivation with two-step hydrothermal liquefaction. Algal Res., 18, 61-68.
Keywords: Biosolid treatment process; High temperature water; Internal recycle; Wastewater treatment; Microalgae cultivation
Strain(s): 48 
DOI: 10.1016/j.algal.2016.06.009
Aikawa, S., Ho, S-H., Nakanishi, A., Chang, J-S., Hasunuma, T., Kondo, A. 2015 Improving polyglucan production in cyanobacteria and microalgae via cultivation design and metabolic engineering. Biotechnol. J., 10, 886-898.
Keywords: Bioethanol; Cyanobacteria; Metabolic engineering; Microalgae; Polyglucan
Strain(s): 39 
PubMed: 25867926
DOI: 10.1002/biot.201400344
Aikawa, S., Inokuma, K., Wakai, S., Sasaki, K., Ogino, C., Chang, J-S., Hasunuma, T., Kondo, A. 2018 Direct and highly productive conversion of cyanobacteria Arthrospira platensis to ethanol with CaCl2 addition. Biotechnol. Biofuels, 11, 50 (article ID).
Keywords: Ethanol conversion; Glycogen extraction; Cyanobacteria; Amylase-displaying yeast; Polysaccharide layer; Organic nutrient
Strain(s): 39 
PubMed: 29492105
DOI: 10.1186/s13068-018-1050-y
Aikawa, S., Izumi, Y., Matsuda, F., Hasunuma, T., Chang, J.-S., Kondo, A. 2012 Synergistic enhancement of glycogen production in Arthrospira platensis by optimization of light intensity and nitrate supply. Bioresour. Technol., 108, 211-215.
Keywords: Arthrospira platensis; Glycogen; Cyanobacteria; Light intensity; Nitrogen starvation
Strain(s): 39 
PubMed: 22277210
DOI: 10.1016/j.biortech.2012.01.004
Aikawa, S., Joseph, A., Yamada, R., Izumi, Y., Yamagishi, T., Matsuda, F., Kawai, H., Chang, J.-S., Hasunuma, T., Kondo, A. 2013 Direct conversion of Spirulina to ethanol without pretreatment or enzymatic hydrolysis processes. Energ. Environ. Sci., 6, 1844-1849.
Strain(s): 39 
DOI: 10.1039/C3EE40305J
Aizawa, K. & Miyachi, S. 1986 Carbonic anhydrase and CO2 concentrating mechanisms in microalgae and cyanobacteria. FEMS Microbiol. Lett., 39, 215-233.
Keywords: aquatic algae; cyanobacteria; photoautotrophs; photorespiration; photosynthesis; transport
Strain(s): 2093216021732235 
DOI: 10.1111/j.1574-6968.1986.tb01860.x
Aizawa, K., Nakamura, Y., Miyachi, S. 1985 Variation of phosphoenolpyruvate carboxylase activity in Dunaliella associated with changes in atmospheric CO2 concentration. Plant Cell Physiol., 26, 1199-1203.
Keywords: carbonic anhydrase; Dunaliella; phosphoenolpyruvate carboxylase; photosynthesis; Porphyridium
Strain(s): 2138 
DOI: 10.1093/oxfordjournals.pcp.a077016
Aizawa, K., Tsuzuki, M., Miyachi, S. 1986 Kinetic studies on fhe active species of inorganic carbon absorbed by the cells of Dunaliella tertiolecta. Plant Cell Physiol., 27, 37-47.
Keywords: bicarbonate utilization; carbon dioxide; carbonic anhydrase; cell surface; Dunaliella tertiolecta; photosynthesis
Strain(s): 2170 
Akao, S., Hosoi, Y., Fujiwara, T. 2014 Utilization of water chestnut for reclamation of water environment and control of cyanobacterial blooms. Environ. Sci. Pollut. Res., 21, 2249-2255.
Keywords: Nitrogen; Phosphorus; Phenolic compounds; Potassium; Trapa natans
Strain(s): 87 
PubMed: 24046225
DOI: 10.1007/s11356-013-2102-2
Akatsuka, S., Sekimoto, H., Iwai, H., Fukumoto, R., Fujii, T. 2003 Mucilage secretion regulated by sex pheromones in Closterium peracerosum-strigosum-littorale complex. Plant Cell Physiol., 44, 1081-1087.
Keywords: Closterium; mucilage; sex pheromone; sexual reproduction
Strain(s): 6768 
DOI: 10.1093/pcp/pcg131
Akatsuka, S., Tsuchikane, Y., Fukumoto, R., Fujii, T., Sekimoto, H. 2006 Physiological characterization of the sex pheromone protoplast-release-inducing protein from the Closterium peracerosum-strigosum-littorale complex (Charophyta). Phycol. Res., 54, 116-121.
Keywords: Closterium; conjugation; mucilage; protoplast release; sex pheromone; sexual reproduction
Strain(s): 6768 
DOI: 10.1111/j.1440-1835.2006.00418.x
Akcaalan, R., Young, FM., Metcalf, JS., Morrison, LF., Albay, M., Codd, GA. 2006 Microcystin analysis in single filaments of Planktothrix spp. in laboratory cultures and environmental blooms. Water Res., 40, 1583-1590.
Keywords: Planktothrix rubescens; Planktothrix agardhii; Microcystin immunoassay; Single filaments; Cyanobacteria
Strain(s): 595 
DOI: 10.1016/j.watres.2006.02.020
Akizuki, S., Cuevas-Rodríguez, G., Toda, T. 2020 Anaerobic digestion effluent treatment using microalgae and nitrifiers in an outdoor raceway pond with fluidized carriers. Water Sci. Technol., 82, 1081–1091.
Keywords: high-ammonia-containing wastewater; immobilization; light-stress; microalgal-bacterial consortia; nitrification; photo-oxygenation
Strain(s): 2173 
DOI: 10.2166/wst.2020.226
Akizuki, S., Cuevas-Rodríguez, G., Toda, T. 2021 Nitrification of anaerobic digestate using a consortium of microalgae and nitrifiers in an open photobioreactor with moving bed carriers. Chemosphere, 263, 127948 (article ID).
Keywords: Bacterial immobilization; light attenuation; light stress; high-ammonia wastewater; photo-oxygenation
Strain(s): 2173 
PubMed: 33297018
DOI: 10.1016/j.chemosphere.2020.127948
Akizuki, S., Kishi, M., Cuevas-Rodríguez, G., Toda, T. 2020 Effects of different light conditions on ammonium removal in a consortium of microalgae and partial nitrifying granules. Water Res., 171, 115445 (article ID).
Keywords: Energy-saving process; Photo-oxygenation; Short-cut nitrogen removal; Ammonium removal pathway; Empirical model
Strain(s): 2173 
PubMed: 31954203
DOI: 10.1016/j.watres.2019.115445
Aktas, T. S., Fujibayashi, M., Takeda, F., Maruo, C., Nishimura, O. 2014 The role of rapid mixing condition on picophytoplankton floc growth. Desalin. Water Treat., 52, 1404-1413.
Keywords: Velocity gradient; Rapid mixing time; Picophytoplankton; Floc formation and breakage; Turbidity removal
Strain(s): 1348 
DOI: 10.1080/19443994.2013.787951
Aktas, T. S., Takeda, F., Maruo, C., Chiba, N., Nishimura, O. 2012 A comparison of zeta potentials and coagulation behaviors of cyanobacteria amd algae. Desalin. Water Treat., 48, 294-301.
Keywords: Zeta potential; Coagulation; Turbidity; Cyanobacteria; algae
Strain(s): 8713482170 
DOI: 10.1080/19443994.2012.698828
Alamsjah, M. A., Hirao, S., Ishibashi, F., Fujita , Y. 2005 Isolation and structure determination of algicidal compounds from Ulva fasciata. Biosci. Biotechnol. Biochem., 69, 2186-2192.
Keywords: algicidal compounds; Ulva fasciata; hexadeca-4,7,10,13-tetraenoic acid; octadeca-6,9,12,15-tetraenoic acid; α-linolenic acid
Strain(s): 15462 
PubMed: 16306701
DOI: 10.1271/bbb.69.2186
Alamsjah, M. A., Hirao, S., Ishibashi, F., Oda, T., Fujita, Y. 2008 Algicidal activity of polyunsaturated fatty acids derived from Ulva fasciata and U. pertusa (Ulvaceae, Chlorophyta) on phytoplankton. J. Appl. Phycol., 20, 713-720.
Keywords: Algicidal compound; Red tide phytoplankton; Ulva fasciata; Ulva pertusa
Strain(s): 137221251252254359381462486 
DOI: 10.1007/s10811-007-9257-5
Alamsjah, M. A., Ishibe, K., Kim, D., Yamaguchi, K., Ishibashi, F., Fujita, Y., Oda, T. 2007 Selective toxic effects of polyunsaturated fatty acids derived from Ulva fasciata on red tide phytoplankter species. Biosci. Biotechnol. Biochem., 71, 265-268.
Keywords: α-linolenic acid; linoleic acid; Ulva fasciata; red tide phytoplankter
Strain(s): 3 
PubMed: 17213644
DOI: 10.1271/bbb.60475
Al-Azab, A. J. S., Widyaningrum, D., Hirakawa, H., Hayashi, Y., Tanaka, S., Ohama, T. 2021 A resin cyanoacrylate nanoparticle as an acute cell death inducer to broad spectrum of microalgae. Algal Res., 54, 102191 (article ID).
Keywords: Cell death; Coccolith; Non-green algae; ROS; Poly (isobutylcyanoacrylate) nanoparticles
Strain(s): 1571527433153459061569971290010171308131027642778 
DOI: 10.1016/j.algal.2021.102191
Alcorta, J., Vergara-Barros, P., Antonaru, L. A., Alcamán-Arias, M. E., Nürnberg, D. J., Díez, B. 2019 Fischerella thermalis: a model organism to study thermophilic diazotrophy, photosynthesis and multicellularity in cyanobacteria. Extremophiles, 23, 635–647.
Keywords: Fischerella: Mastigocladus: Distribution: Thermophile: Nitrogen fxation: Photosynthesis: Multicellularity: Hot springs
Strain(s): 59237544106 
PubMed: 31512055
DOI: 10.1007/s00792-019-01125-4
Alghanimy, D. B. G. & Alghanmi, H. A. 2021 Effect of different magnesium oxide nanoparticles concentration on the growth of the Lyngbya majuscula. Eco. Env. & Cons., 27, 690-694.
Keywords: Nanoparticles; MgO NPs; Lyngbya majuscula; Chlorophyll a; Carotenoids
Strain(s): 46 
Allen, M. B. 1959 Studies with Cyanidium caldarium, an anomalously pigmented chlorophyte. Arch. Mikrobiol., 32, 270-277.
Strain(s): 298 
DOI: 10.1007/BF00409348
Allewaert, C. C., Vanormelingen, P., Daveloose, I., Vyverman, T. 2017 Intraspecific trait variation affecting astaxanthin productivity in two Haematococcus (Chlorophyceae) species. Algal Res., 21, 191-202.
Keywords: Astaxanthin productivity; Haematococcus pluvialis; Haematococcus rubicundus; Functional traits; Common-garden experiment; Intraspecific variation
Strain(s): 144 
DOI: 10.1016/j.algal.2016.10.021
Almeida, A. V. M., Vaz, M. G. M. V., de Castro, N. V., Genuário, D. B., Oder, J. C., de Souza, P. A. M., Martins, S. B., Machado, M., Nunes-Nesi, A., Araújo, W. L. 2023 How diverse a genus can be: An integrated multi-layered analysis into Desmonostoc (Nostocaceae, Cyanobacteriota). Syst. Appl. Microbiol., 46, 126422 (article ID).
Keywords: Diversity; Growth; Metabolism; Nif genes; Physiology; Phylogeny
Strain(s): 252820942107 
PubMed: 37119668
DOI: 10.1016/j.syapm.2023.126422
Altenburger, R., Schmitt-Jansen, M., Riedl, J. 2008 Bioassays with unicellular algae: deviations from exponential growth and its implications for toxicity test results. J. Environ. Qual., 37, 16-21.
Strain(s): 4282 
PubMed: 18178874
DOI: 10.2134/jeq2006.0556
Alvarenga, D. O., Andreote, A. P. D., Branco, L. H. Z., Delbaje, E., Cruz, R. B., Varani, A. D., Fiore, M. F. 2021 Amazonocrinis nigriterrae gen. nov., sp. nov., Atlanticothrix silvestris gen. nov., sp. nov. and Dendronalium phyllosphericum gen. nov., sp. nov., nostocacean cyanobacteria from Brazilian environments. Int. J. Syst. Evol. Microbiol., 71, 004811 (article ID).
Keywords: Nostocaceae; phyllosphere; anthropogenic dark earth; nitrogen fixation; phylogenomics
Strain(s): 4103 
PubMed: 34032563
DOI: 10.1099/ijsem.0.004811
Anam, K., Rahman, D. Y., Hidhayati, N., Rachmayati, R., Susilaningsih, D., Agustini, N. W. S., Praharyawan, S., Susanti, H., Apriastini, M. 2021 Lipid accumulation on optimized condition through biomass production in green algae. IOP Conf. Ser.: Earth Environ. Sci., 762, 012075 (article ID).
Strain(s): 215221692170 
DOI: 10.1088/1755-1315/762/1/012075
Anas, A. R. J., Nakajima, A., Naruse, C., Tone, M., Asukabe, H., Harada, K. 2016 Determination of fVIIa-sTF inhibitors in toxic Microcystis cyanobacteria by LC-MS technique. Mar. Drugs, 14, 7 (article ID).
Keywords: cyanobacteria; toxic Microcystis; anticoagulant; fVIIa-sTF inhibitors; peptides; aeruginosins; blood coagulation cascade
Strain(s): 891021031072981025104310581071108510991133 
PubMed: 26729138
DOI: 10.3390/md14010007
Andemichael, H., Lee, J. W. 2016 Toxicological study of biofuel ethanol with blue green alga Spirulina platensis. Algal Res., 18, 110-115.
Keywords: Spirulina platensis; Biofuel ethanol; Cyanobacteria; Ethanol tolerance bioassay; Biofuel ethanol toxicological effect
Strain(s): 39 
DOI: 10.1016/j.algal.2016.05.032
Ando, D., Fujisawa, T., Katagi, T. 2017 Fate of flumioxazin in aquatic plants: Two algae (Pseudokirchneriella subcapitata, Synechococcus sp.), duckweed (Lemna sp.), and water milfoil (Myriophyllum elatinoides). J. Agric. Food Chem., 65, 8813-8822.
Keywords: aquatic plants; conjugation; flumioxazin; metabolism; sediment exposure; water exposure
Strain(s): 35937 
PubMed: 28920683
DOI: 10.1021/acs.jafc.7b03355
Ando, T., Nagase, H., Eguchi, K., Hirooka, T., Nakamura, T., Miyamoto, K., Hirata, K. 2007 A novel method using cyanobacteria for ecotoxicity test of veterinary antimicrobial agents. Environ. Toxicol. Chem., 26, 601-606.
Keywords: Antimicrobial agent; Cyanobacterium; Ecotoxicity test; Algal toxicity
Strain(s): 1923441073277 
PubMed: 17447543
DOI: 10.1897/06-195R.1
Ando, T., Otsuka, S., Nishiyama, M., Sendo, K., Watanabe, M. M., Matsumoto, S. 2003 Toxic effects of dichloromethane and trichloroethlene on the growth of planktonic green algae, Chlorella vulgaris NIES227, Selenastrum capricornutum NIES35, and Volvulina steinii NIES545. Microbes Environ., 18, 43-46.
Keywords: algal growth potential (AGP); bioindicator; dichloromethane; organic solvents; trichloroethlene
Strain(s): 35227545 
DOI: 10.1264/jsme2.18.43
Annoura, T., Nara, T., Makiuchi, T., Hashimoto, T., Aoki, T. 2005 The origin of dihydroorotate dehydrogenase genes of kinetoplastids, with special reference to their biological significance and adaptation to anaerobic, parasitic conditions. J. Mol. Evol., 60, 113-127.
Keywords: Dihydroorotate dehydrogenase; Trypanosoma cruzi Bodonid; Kinetoplastid; Euglenozoa; Phylogenetic tree; Gene fusion; Horizontal gene transfer; Anaerobiosis
Strain(s): 48 
PubMed: 15696374
DOI: 10.1007/s00239-004-0078-8
Antonaru, L. A., Cardona, T., Larkum, A. W. D., Nürnberg, D. J. 2020 Global distribution of a chlorophyll f cyanobacterial marker. ISME J., 14, 2275–2287.
Strain(s): 2675933974 
PubMed: 32457503
DOI: 10.1038/s41396-020-0670-y
Antonaru, L. A., Nurnberg, D. J. 2017 Role of PatS and cell type on the heterocyst spacing pattern in a filamentous branching cyanobacterium. FEMS Mircobiol. Lett., 364 fnx154 (article ID).
Keywords: multicellularity; cyanobacteria; Stigonematales; cell differentiation; nitrogen fixation; heterocyst spacing pattern; PatS
Strain(s): 59237543756 
PubMed: 28859320
DOI: 10.1093/femsle/fnx154
Antoshvili, M. Caspy, I., Hippler, M., Nelson, N. 2019 Structure and function of photosystem I in Cyanidioschyzon merolae. Photosynth. Res., 139, 499-508.
Keywords: Photosynthesis; Photosystem I; Crystal structure; Synechocystis; Cyanobacteria; Membrane complexes
Strain(s): 1084 
PubMed: 29582227
DOI: 10.1007/s11120-018-0501-4
Aoi, J., Sasaki, D., Asayama, M. 2021 Development of a method for phycocyanin recovery from filamentous cyanobacteria and evaluation of its stability and antioxidant capacity. BMC Biotechnol., 21, 40 (article ID).
Keywords: Antioxidant; Arthrospira platensis; Cell lysis; Limnothrix sp., Phycocyanin; Pseudanabaena sp.
Strain(s): 39 
PubMed: 34134665
DOI: 10.1186/s12896-021-00692-9
Aoki, S. & Miyachi, S. 1964 Chromatographic analysis of acid-soluble polyphosphates in Chlorella cells. Plant Cell Physiol., 5, 241-250.
Strain(s): 2170 
Aoki, S., Ohara, S., Kimura, K., Mizuguchi, H., Fuse, Y., Yamada, E. 2008 Characterization of dissolved organic matter released from Microcystis aeruginosa. Anal. Sci., 24, 389-394.
Strain(s): 109 
PubMed: 18332548
DOI: 10.2116/analsci.24.389
Aoki, S., Ohara, S., Kimura, K., Mizuguchi, H., Fuse, Y., Yamada, E. 2008 Characterization of fluorophores released from three kinds of lake phytoplankton using gel chromatography and fluorescence spectrophotometry. Anal. Sci., 24, 1461-1467.
Strain(s): 109275665 
PubMed: 18997376
DOI: 10.2116/analsci.24.1461
Aoshima, J., Kubota, M., Nishimura, T., Iwamura, T. 1984 DNA polymerases of Chlorella. II. Characterization to distinguish the two enzymes. J. Biochem., 96, 461-473.
Strain(s): 2170 
Aoshima, J., Nishimura, T., Iwamura, T. 1982 DNA polymerases of Chlorella. I. Chloroplastic and nuclear DNA polymerases in synchronized algal cells. Cell Struct. Funct., 7, 327-340.
Strain(s): 2170 
Aoyama, K., Iwahori, K., Miyata, N. 2003 Application of Euglena gracilis cells to comet assay: evaluation of DNA damage and repair. Mutat. Res. Genet. Toxicol. Environ. , 538, 155-162.
Keywords: Comet assay; Single-cell gel electrophoresis; Euglena gracilis; DNA damage; DNA repair
Strain(s): 49 
DOI: 10.1016/S1383-5718(03)00113-X
Aoyama, K., Miyata, N., Iwahori, K. 2005 Evalution of DNA damaging potential in landfill leachates by comet assay using Euglena gracilis. Jpn. J. Water Treat. Biol., 41, 73-81.
Keywords: comet assay; Euglena gracilis; landfill leachate; umu test
Strain(s): 49 
DOI: 10.2521/jswtb.41.73
Aoyama, K., Uemura, I., Miyake, J., Asada, Y. 1997 Fermentative metabolism to produce hydrogen gas and organic compounds in a cyanobacterium, Spirulina platensis. J. Ferment. Bioeng., 83, 17-20.
Keywords: Spirulina; hydrogen; organic acid; ethanol
Strain(s): 46 
DOI: 10.1016/S0922-338X(97)87320-5
Arai, S., Takahashi, H. , Takano, H. , Sakai, A., Kawano, S. 1998 Isolation, characterization, and chromosome mapping of an actin gene from the primitive green alga, Nannochloris bacillaris (Chlorophyceae). J. Phycol., 34, 477–485.
Keywords: actin gene; actin localization; cell division; karyotype; Nannochloris bacillaris
Strain(s): 4016 
PubMed: 8575024
DOI: 10.1046/j.1529-8817.1998.340477.x
Araie, H., Nakamura, H., Toney, J. L., Haigg, H. A., Plancq, J., Shiratori, T., Leavitt, P. R., Seki, O., Ishida, K-I., Sawada, K., Suzuki, I., Shiraiwa, Y. 2018 Novel alkenone-producing strains of genus Isochrysis (Haptophyta) isolated from Canadian saline lakes show temperature sensitivity of alkenones and alkenoates. Org. Geochem., 121, 89-103.
Keywords: Alkenones; Alkenone unsaturation index; Canadian salt lakes; Chemotaxonomy; Haptophytes; Isochrysis; Long-chain alkyl ketones; Paleothermometer; UK37
Strain(s): 43314332433343344335 
DOI: 10.1016/j.orggeochem.2018.04.008
Araie, H., Sakamoto, K., Suzuki, I., Shiraiwa, Y. 2011 Characterization of the selenite uptake mechanism in the coccolithophore Emiliania huxleyi (Haptophyta). Plant Cell Physiol., 52, 1204-1210.
Strain(s): 837 
PubMed: 21632656
DOI: 10.1093/pcp/pcr070
Arakaki, Y., Fujiwara, T., Kawai-Toyooka, H., Kawafune, K., Featherston, J., Durand, P. M., Miyagishima, S., Nozaki, H. 2017 Evolution of cytokinesis-related protein localization during the emergence of multicellularity in volvocine green algae. BMC Evol. Biol., 17, 243 (article ID).
Keywords: Multicellularity; Volvocine algae; Tetrabaena socialis; DRP1
Strain(s): 5714121 
PubMed: 29212441
DOI: 10.1186/s12862-017-1091-z
Arakaki, Y., Kawai-Toyooka, H., Hamamura, Y., Higashiyama, T., Noga, A., Hirono, M., Olson, B. J. S. C., Nozaki, H. 2013 The simplest integrated multicellular organism unveiled. PLoS One, 8, e81641 (article ID).
Strain(s): 571 
PubMed: 24349103
DOI: 10.1371/journal.pone.0081641
Archibald, P. A. 1975 Trebouxia de Pulmaly (Chlorophyceae, Chlorococcales) and Pseudotrebouxia gen. nov. (Chlorophyceae, Chlorosarcinales). Phycologia, 14, 125-137.
Strain(s): 21832185218621872188 
DOI: 10.2216/i0031-8884-14-3-125.1
Arii, S., Yamashita, R., Tsuji, K., Tomita, K., Hasegawa, M., Bober, B., Harada, K. 2021 Differences in susceptibility of cyanobacteria species to lytic volatile organic compounds and influence on seasonal succession. Chemosphere, 284, 131378 (article ID).
Keywords: Susceptibility; Volatile organic compounds (VOCs); β-Cyclocitral; Minimal inhibitory concentration (MIC); Seasonal succession
Strain(s): 10211229880884316421652167716961728 
PubMed: 34217930
DOI: 10.1016/j.chemosphere.2021.131378
Arikawa, M., Saito, A., Omura, G., Khan, S. M. M. K., Kinoshita, E., Suzaki, T. 2002 Ca2+-dependent cytoplasmic contractility of the heliozoan Actinophrys sol. Eur. J. Protistol., 38, 365-372.
Keywords: Cell model; Permeabilization; Contractile tubules; Heliozoa; Protozoa
Strain(s): 2497 
DOI: 10.1078/0932-4739-00879
Arikawa, M., Saito, A., Omura, G., Khan, S. M. M. K., Suetomo, Y., Kakuta, S., Suzaki, T. 2005 Ca2+-dependent nuclear contraction of heliozoan Actinophrys sol. Cell Calcium, 38, 447-455.
Strain(s): 2497 
PubMed: 16099499
DOI: 10.1016/j.ceca.2005.06.034
Arikawa, M., Saito, A., Omura, G., Khan, S. M. M. K., Suetomo, Y., Kakuta, S., Suzaki, T. 2006 Ca2+-dependent in vivo contractility of a precipitate isolated from an extract of the heliozoan Actinophrys sol. Cell Motil. Cytoskeleton, 63, 57-65.
Keywords: contraction; precipitate; heliozoan; protozoa
Strain(s): 2497 
PubMed: 16362955
DOI: 10.1002/cm.20106
Arima, H., Horiguchi, N., Takaichi, S., Kofuji, R., Ishida, K-I., Wada, K., Sakamoto, T. 2012 Molecular genetic and chemotaxonomic characterization of the terrestrial cyanobacterium Nostoc commune and its neighboring species. FEMS Microbiol. Ecol., 79, 34-45.
Keywords: Anhydrobiosis; carotenoid; ferredoxin-NADP; oxidoreductase; nitrate/nitrite transporter; random amplified polymorphic DNA; water stress protein
Strain(s): 24282107210825382539 
PubMed: 22066798
DOI: 10.1111/j.1574-6941.2011.01195.x
Arsın, S., Delbaje, E., Jokela, J., Wahlsten, M., Farrar, Z. M., Permi, P., Fewer, D. 2023 A plastic biosynthetic pathway for the production of structurally distinct microbial sunscreens. ACS Chem. Biol., 18, 1959–1967.
Strain(s): 257326721002107210921112130375537563757397440734102410341054106 
PubMed: 37603862
DOI: 10.1021/acschembio.3c00112
Aruga, Y. 1965 Ecological studies of photo-synthesis and matter production of phytoplankton II. Photosynthesis of algae in relation to light intensity and temperature. Bot. Mag. Tokyo, 78, 360-365.
Strain(s): 19 
Asada, C., Doi, K., Sasaki, C., Nakamura, Y. 2012 Efficient extraction of starch from microalgae using ultrasonic homogenizer and its conversion into ethanol by simultaneous saccharification and fermentation. Natural Resources, 3, 175-179
Keywords: Bioethanol; Microalgae; Ultrasonic Treatment; Homoginizer; Starch
Strain(s): 437 
DOI: 10.4236/nr.2012.34023
Asada, Y. & Kawamura, S. 1986 Screening for cyanobacteria that evolve molecular hydrogen under dark and anaerobic conditions. J. Ferment. Technol., 64, 553-556.
Strain(s): 19212336394621193277 
DOI: 10.1016/0385-6380(86)90081-6
Asada, Y., Kawamura, S., Ho, K.-K. 1987 Hydrogenase from the unicellular cyano-bacterium, Microcystis aeruginosa. Phytochemistry, 26, 637-640.
Keywords: Microcystis aeruginosa; cyanobacterium; hydrogenase; purification; properties
Strain(s): 44 
DOI: 10.1016/S0031-9422(00)84756-1
Asai, R., Matsukawa, R., Ikebukuro, K., Karube, I. 1998 Chemiluminescence flow-injection system for rapid detection of red tide phytoplankton, Chattonella antiqua. Anal. Lett., 31, 2279-2288.
Keywords: chemiluminescence; flow injection; superoxide; luciferin analogue; red tide
Strain(s): 113 
DOI: 10.1080/00032719808005302
Asai, R., Matsukawa, R., Ikebukuro, K., Karube, I. 1999 Highly sensitive chemiluminescence flow-injection detection of the red tide phytoplankton Heterosigma carterae. Anal. Chim. Acta, 390, 237-244.
Keywords: Chemiluminescence; Flow injection analysis; Red tide phytoplankton; Superoxide; Hydrogen peroxide; Heterosigma carterae
Strain(s): 6586 
DOI: 10.1016/S0003-2670(99)00145-2
Asai, R., Ootani, K., Nomura, Y., Nakamura, C., Ikebukuro, K., Arikawa, Y., Miyake, J., Karube, I. 2003 PCR-based ribosomal DNA detection technique for microalga (Heterosigma carterae) causing red tide and its application to a biosensor using labeled probe. Mar. Biotechnol., 5, 417-423.
Keywords: small subunit rDNA; Heterosigma carterae; fluorescence polarization; asymmetric polymerase chain reaction; surface plasmon resonance
Strain(s): 144 
PubMed: 14730424
DOI: 10.1007/s10126-002-0081-2
Asamizu, E., Miura, K., Kucho, K., Inoue, Y., Fukuzawa, H., Ohyama, K., Nakamura, Y., Tabata, S. 2000 Generation of expressed sequence tags from low-CO2 and high-CO2 adapted cells of Chlamydomonas reinhardtii. DNA Res., 7, 305-307.
Keywords: Chlamydomonas reinhardtii; cDNA; EST; CO2 stress
Strain(s): 2235 
PubMed: 11089912
DOI: 10.1093/dnares/7.5.305
Asamizu, E., Nakamura, Y., Miura, K., Fukuzawa, H., Fujiwara, S., Hirono, M., Iwamoto, K., Matsuda, Y., Minagawa, J., Shimogawara, K., Takahashi, Y., Tabata, S. 2004 Establishment of publicly available cDNA material and information resource of Chlamydomonas reinhardtii (Chlorophyta), to facilitate gene function analysis. Phycologia, 43, 722-726.
Strain(s): 2235 
DOI: 10.2216/i0031-8884-43-6-722.1
Asamizu, E., Nakamura, Y., Sato, S., Fukuzawa, H., Tabata, S. 1999 A large scale structure analysis of cDNAs in a unicellular green alga, Chlamydomonas reinhardtii. I. Generation of 3433 non-redundant expressed sequence tags. DNA Res., 6, 369-373.
Keywords: green alga; Chlamydomonas reinhardtii; cDNA; EST; normalized library; similarity search
Strain(s): 2235 
PubMed: 10691129
DOI: 10.1093/dnares/6.6.369
Aso, M., Matsumae, R., Tanaka, A., Tanaka, R., Takabayashi, A. 2021 Unique peripheral antennas in the photosystems of the streptophyte alga Mesostigma viride. Plant Cell Physiol., 62, 436–446.
Keywords: Green algae; Iso-seq; Mesostigma viride; Native-PAGE; Photosystem
Strain(s): 296 
PubMed: 33416834
DOI: 10.1093/pcp/pcaa172
Asukabe, H., Akahori, S., Ueno, E., Nakayama, T., Yamashita, R., Arii, S., Harada, K., Imanishi, S. Y. 2020 Cyanobacterial classification with the toxicity using MALDI Biotyper. J. Am. Soc. Mass Spectrom., 31, 1572-1578.
Keywords: cyanobacteria; MALDI Biotyper; microcystins; profiling
Strain(s): 27394273818789100101102103104105107111112207208230266298416433478510512515592593604611808809835843846847905928931932945981989102510431058106110641068106910711076108510991101110511131115112611331134113511441157121516421643165216681672167316771678169820872131241226653708373337343736375537563757 
PubMed: 32501712
DOI: 10.1021/jasms.0c00148
Azaman, S. N. A., Wong, D. C. J., Tan, S. W., Yusoff, F. M., Nagao, N., Yeap, S. K. 2020 De novo transcriptome analysis of Chlorella sorokiniana: effect of glucose assimilation, and moderate light intensity. Sci Rep, 10, 17331 (article ID).
Strain(s): 2168 
PubMed: 33060668
DOI: 10.1038/s41598-020-74410-4
Azizi, M., Moteshafi, H., Hashemi, M. 2020 A novel CO2 steady feeding based on the pH steady strategy data in the Haematococcus pluvialis cultivation to maximize the cell growth and carbon bio-sequestration. Bioresour. Technol., 314, 123752 (article ID).
Keywords: Haematococcus pluvialis; CO2 feeding; Productivity; CO2 bio-fixation; RuBisCO activity
Strain(s): 144 
PubMed: 32629377
DOI: 10.1016/j.biortech.2020.123752
Azizi, M., Moteshafi, H., Hashemi, M. 2020 Distinctive nutrient designs using statistical approach coupled with light feeding strategy to improve the Haematococcus pluvialis growth performance and astaxanthin accumulation. Bioresour. Technol., 300, 122594 (article ID).
Keywords: H. pluvialis; Astaxanthin; Nutrients designing; Optimization; Light-feeding strategy
Strain(s): 144 
PubMed: 31901774
DOI: 10.1016/j.biortech.2019.122594
Azuma, T., Pánek, T., Tice, A. K., Kayama, M., Kobayashi, M., Miyashita, H., Suzaki, T., Yabuki, A., Brown, M. W., Kamikawa, R. 2022 An enigmatic stramenopile sheds light on early evolution in Ochrophyta plastid organellogenesis. Mol. Biol. Evol., 39, msac065 (article ID).
Keywords: Actinophryidae; plastid evolution; aminoacyl-tRNA synthase; gene transfer; phylogenomics; organellar DNA
Strain(s): 24973374 
PubMed: 35348760
DOI: 10.1093/molbev/msac065
Adachi, Y., Yokoyama, S.-I., Tanahashi, M. 2017 Development of antibacterial and antialgae product using wood biomass distillation (II). Bull. Ind. Technol. Center Gifu Prefectural Govt., 11, 9-11 (in Japanese).
Strain(s): 31227 

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