1. NIES株を使った論文リスト(2024)

文献 種名・NIES株番号
Coale, T. H., Loconte, V., Turk-Kubo, K. A., Vanslembrouck, B., Mak, W. K. E., Cheung, S., Ekman, A., Chen, J.-H., Hagino, K., Takano, Y., Nishimura, T., Adachi, M., Le Gros, M., Larabell, C., Zehr, J. P.  2024  Nitrogen-fixing organelle in a marine alga.  Science, 384 new Braarudosphaera bigelowii NIES-4399
Derienko, T. & Pröschold, T.  2024  Solotvynia, a New Coccoid Lineage among the Ulvophyceae (Chlorophyta).  Microorganisms, 12, 868 (article ID). new Halochlorococcum sp. NIES-1838, NIES-1839,
Dong, X., Zhang, S., Chen, X., Lei, Z., Yuan, T., Shimizu, K., Utsumi, M.  2024  Preliminary tests on carbon and nitrogen emissions and nutrients availability upon application of algal-bacterial granules to arid and low fertility soi.  Chem. Eng. J., 152250 (article ID).492,  new Aphanizomenon flos-aquae NIES-1726
Feng, S., Liu, F., Zhu, S., Xu, Z., Qin, L., Feng, P., Wang, Z., Chen, H., Guo, W., Ngo, H. H.  2024  Role of hydraulic retention time in integration of microalgae and activated sludge process for nutrient recycle from diluted dairy liquid digestate.  Chem. Eng. J., 484, 49538 (article ID). new Chlorella vulgaris var. vulgaris NIES-227
Horikoshi, S., Hidaka, T., Nishimura, F., Kishimoto, N.  2024  Development of separation and recovery technology of cultured Euglena gracilis using activated sludge for anaerobic digestion.  Bioresour. Technol. Reports, 25, 101790 (article ID). new Euglena gracilis NIES-49
Hosoda, K., Seno, S., MurakamiN., Matsuda, H., Osada, Y., Kamiura, R., Kondoh, M.  2024  Synthetic model ecosystem of 12 cryopreservable microbial species allowing for a noninvasive approach.  Biosystems, 235, 105087 (article ID). Anabaenopsis circularis NIES-21,
Chlamydomonas reinhardtii NIES-2236 ,
Chlorella vulgaris var. vulgaris NIES-227,
Inamori, Y., Inamori, R., Ruike, K., Murakami, K., Suzuki, R.  2024  Screening of the bacterial consortium related to the microcystin-LR degradation isolated from the marine area, Isahaya-bay, and the freshwater area, Isahaya-Shin-ike-Pond, Japan.  Int. J. Biol., 15, 8-17. new Microcystis aeruginosa NIES-298
Karitani, Y., Yamada, R., MatsumotoT., Ogino, H.  2024  Improvement of cell growth in green algae Chlamydomonas reinhardtii through co-cultivation with yeast Saccharomyces cerevisiae.  Biotechnol. Lett., 46, 431-441. new Chlamydomonas reinhardtii NIES-2238
Karitani, Y., Yamada, R., MatsumotoT., Ogino, H.  2024  UV mutagenesis improves growth potential of green algae in a green algae–yeast co‑culture system.  Arch. Microbiol., 206, 61 (article ID). Chlamydomonas reinhardtii NIES-2238
Kasai, Y., Takagi, S., Ota, S., Ishii, K., Takeshita, T., Kawano, S., Harayama, S.  2024  Development of a CRISPR/Cas9-mediated gene-editing method to isolate a mutant of the unicellular green alga Parachlorella kessleri strain NIES-2152 with improved lipid productivity.  Biotechnol. Biofuels Bioprod., 17, 36 (article ID). new Parachlorella kessleri NIES-2152
Kato, K., Hamaguchi, T., Kumazawa, M., Nakajima, Y., Ifuku, K., Hirooka, S., Hirose, Y., Miyagishima, S., Suzuki, T., Kawakami, K., Dohmae, N., Yonekura, K., Shen, J.-R., Nagao, R.  2024  The structure of PSI-LHCI from Cyanidium caldarium provides evolutionary insights into conservation and diversity of red-lineage LHCs.  Proc. Natl. Acad. Sci. U. S. A., 121, e2319658121 (article ID). new Cyanidium caldarium NIES-2137
Kodama, Y. & Endoh, Y.  2024  Comparative analyses of the symbiotic associations of the host Paramecium bursaria with free-living and native symbiotic species of Chlorella.  Curr. Microbiol., 81, 66 (article ID). Chlorella sorokiniana NIES-2169
Lee, C., Han, S.-I., Na, H., Kim, Z., Ahn, J. W., Oh, B., Kim, H. S.  2024  Comprehensive understanding of the mutant 'giant' Arthrospira platensis developed via ultraviolet mutagenesis.  Front. Plant Sci., 15, 1369976 (article ID). new Arthrospira platensis NIES-39
Maruyama, K. & Ohtsuki, T.  2024  A simple method for the preparation of single cells and regeneration of colonies of Botryococcus braunii NIES836.  J. Microbiol. Methods, 216, 106859 (article ID). Botryococcus braunii NIES-836
Matsuzawa, T., Tai, R., Mano, H., Ogura, I.  2024  Applicability of enzymatic and phenol–sulfuric acid methods for determination of cellulose nanofbers in ecotoxicity testing.  J. Wood Sci. new Raphidocelis subcapitata NIES-35
Murray, JvS., Passfield, E. M. F., Rhodes, L. L., Puddick, J., Finch, S. C., Smith, K. F., van Ginkel, R., Mudge, E. M., Nishimura, T., Funaki, H., Adachi, M., Prinsep, M. R., Harwood, D. T.  2024  Targeted metabolite fingerprints of thirteen Gambierdiscus, five Coolia and two Fukuyoa species.  Mar. Drugs, 22, 119 (article ID). new Gambierdiscus jejuensis NIES-4120
Nagai, Y., Uematsu, K., Mamo, B., Toyofuku, T.  2024  The calcitic test growth rate of Spirillina vivipara (Foraminifera).  Biogeosciences, 21, 1675-1684. new Dunaliella tertiolecta NIES-2258
Nakanishi, A., Omino, N., Nakamura, T., Goto, S., Matsumoto, R., Yomogita, M., Narisawa, N., Kimijima, M., Iritani, K.  2024  Evaluation of cellular responses of heterotrophic Escherichia coli cultured with autotrophic Chlamydomonas reinhardtii as a nutrient source by analyses based on microbiology and transcriptome.  Microorganisms, 12, 452 (article ID). new Chlamydomonas reinhardtii NIES-2235
Nakanishi, A., Yomogita, M., Horimoto, T.  2024  Evaluation of cellular responses by Chlamydomonas reinhardtii in media containing dairy-processing residues derived from cheese as nutrients by analyzing cell growth activity and comprehensive gene transcription levels.  Microorganisms, 12, 715 (article ID). new Chlamydomonas reinhardtii NIES-2235
Ohnuki, S., Sato, N., Fujiwara, S.  2024  Investigation of the cause of the sensitivity difference to pyrazosulfuron-ethyl between the green algae, Raphidocelis subcapitata and Desmodesmus subspicatus, focusing on target-site and nontarget-site resistance.  Jpn. J. Environ. Toxicol., 27, 9-22. new Desmodesmus subspicatus NIES-4282
Ok, J. H., Jeong, H. J., You, J. H., Park, S. A., Kang, H. C., Eom, S. H., Lee, M. J., Rho, J.-R.  2024  Interactions between the calanoid copepod Acartia hongi and the bloom-forming dinoflagellates Karenia bicuneiformis and K. selliformis.  Mar. Biol., 171, 112 (article ID). new Karenia selliformis NIES-4541
Ramírez‑Romero, A., Da Costa Magalhães, B., Matricon, L., Sassi, J.-F., Steyer, J.-P., Delrue, F.  2024  Aqueous phase recycling: impact on microalgal lipid accumulation and biomass quality.  Environ. Sci. Pollut. Res. new Chlorella sorokiniana NIES-2173,
Chlorella vulgaris var. vulgaris NIES-227
Shen, X. F., Xu, Y. P., Jiang, Y. F., Gao, L. J., Tong, X. Q., Gong, J., Yang, Y. F., Zeng, R. J.  2024  Evaluating nutrient limitation in co-culture of Chlorella pyrenoidosa and Rhodobacter sphaeroides.  Sci. Total Environ., 906, 167706 (article ID). Chlorella sorokiniana NIES-2168
Shinohara, K., Ito, Y., Okunishi, S., Maeda, H.  2024  Elucidating the seasonal dominance replacement mechanism of harmful raphidophytes Chattonella marina and Heterosigma akashiwo using the Lotka–Volterra model.  Ecol. Model., 491, 110660 (article ID). new Chattonella marina var. marina NIES-115,
Heterosigma akashiwo NIES-145
Shiraishi, H., Sasase, M., Nakashima, A. S.  2024  Helicoid morphology of Arthrospira platensis NIES-39 confers temperature compensation in the longitudinal movement velocity of its trichomes.  Phycology, 4, 104-116. Arthrospira platensi NIES-39
Shoguchi, E., Kawachi, M., Shinzato, C., Beedessee, G.  2024  Functional analyses of bacterial genomes found in Symbiodiniaceae genome assemblies.  Environ. Microbiol. Rep., 16, e13238 (article ID). new Breviolum minutum NIES-3808,
Cladocopium sp. NIES-4077,
Durusdinium trenchii NIES-2907 さらに表示する
Tai, R., Ogura, I., Okazaki, T., Iizumi, Y., Mano, H.  2024  Algal growth inhibition test with TEMPO-oxidized cellulose nanofibers.  NanoImpact, 34, 100504 (article ID). new Raphidocelis subcapitata NIES-35
Takusagawa, M., Misumi, O., Nozaki, H., Kato, S., Maruyama, S., Tsujimoto-Inui, Y., Yagisawa, F., Ohnuma, M., Kuroiwa, H, Kuroiwa, T., Matsunaga, S.  2024  Complete mitochondrial and chloroplast DNA sequences of the freshwater green microalga Medakamo hakoo.  Genet. Syst. Medakamo hakoo NIES-4000
Tsai, K.-P., Kirschman, Z. A., Moldaenke, C., Chaffin, J. D., McClure, A., Seo, Y., Bridgeman, T. B.  2024  Field and laboratory studies of fluorescence-based technologies for real-time tracking of cyanobacterial cell lysis and potential microcystins release.  Sci. Total Environ., 920, 171121 (article ID). new Microcystis aeruginosa NIES-298
Tuji, A., Ogiso-Tanaka, E., Yamaguchi, H.  2024  Complete genome sequence of Annamia dubia, filamentous colony-making Chroococcales with the analysis of FraC gene influencing filament integrity.  J. Genomics, 12, Annamia dubi NIES-4383
Ueno, Y. & Akimoto, S.  2024  Long-term light adaptation of light-harvesting and energy-transfer processes in the glaucophyte Cyanophora paradoxa under different light conditions.  Photosynth. Res., 159, 165-175. new Cyanophora paradoxa NIES-547
Yang, C., Ding, M., Hou, K., Feng, J., Li, X., Pan, X., Yang, C., Zhang, X., Guo, J., Dai, X.  2024  Dissolved organic matter, calcium ion and extracellular polymeric substances on living associated bacteria of Microcystis colony are crucial for unicellular Microcystis to efficiently form colonies.  J. Hazard. Mater., 471, 134352 (article ID). new Microcystis aeruginosa NIES-843
Zhang, K., Wan, M., Bai, W., Bao, Z., Duan, X., Wang, W., Fan, F., Li, Y.  2024  A novel heterotrophic cultivation process of Euglena gracilis based on NaCl stress significantly increases the paramylon production.  Algal Res., 78, 103391 (article ID). new Euglena gracilis NIES-48
Zhao, Y., Li, Z., Fan, Y., Santisouk, L., Lei, Z., Yuan, T., Shimizu, K., Utsumi, M.  2024  A preliminary test for nitrogen recovery potential of nitrogen fixing cyanobacteria and its granules treating wastewater containing different nitrogen species.  Chem. Eng. J., 490, 151765 (article ID). new Aphanizomenon flos-aquae NIES-1726, NIES-1728
Zheng, S., Lee, V., Meza-Padilla, I., Nissimov, J. I.  2024  Antiviral discovery in toxic cyanobacteria: Low hanging fruit in the age of pandemics.  J. Phycol. new Microcystis aeruginosa NIES-298

2. NIES株を使った論文リスト(2023)

文献 種名・NIES株番号
Balloo, N., Mehjabin, J. J., Phan, C.-S., Okino, T.  2023  Heat shock and iron limitation modulate the metabolic profile of the cyanobacterium Microcystis aeruginosa NIES-88.  Phycol. Res. Microcystis aeruginosa NIES-88
Ban, H., Sato, S., Yoshikawa, S., Yamada, K., Nakamura, Y., Ichinomiya, M., Sato, N., Blanc-Mathieu, R., Endo, H., Kuwata, A., Ogata, H.  2023  Genome analysis of Parmales, the sister group of diatoms, reveals the evolutionary specialization of diatoms from phago-mixotrophs to photoautotrophs.  Commun. Biol., 6, 697 (article ID). Triparma laevis f. inornata NIES-2565,
Triparma laevis f. longispina NIES-3699,
Triparma strigata NIES-3701 さらに表示する
Carrillo-Carrasco, V. P., Hernandez-Garcia, J., Weijers, D.  2023  Electroporation-based delivery of proteins in Peniummargaritaceum and other zygnematophycean algae.  Physiol. Plant., 175, e1412 (article ID). Closterium peracerosum-strigosum-littorale complex NIES-67
Penium margaritaceum NIES-217
Chen, K., Tanaka, H., Takeda, F., Ebie, Y., Yamazaki, H.  2023  Evaluation of algal growth inhibition of effluents for treated water from tandoku-syori and gappei-syori johkasou using the WET method.  J. Water Environ. Technol., 21, 141-150. Chattonella marina var. antiqua NIES-1
Dahedl, E. K. & Urakawa, H.  2023  Differential effects of hydrogen peroxide and L-lysine treatments on the growth of freshwater Cyanophyta and Chlorophyta.  Ecologies, 4, 355-370. Microcystis aeruginosa NIES-88, NIES-102, NIES-843, NIES-4325
Daniela Gómez-Martínez, D., Bengtson, J., Nilsson, A. K., Clarke, A. K., Nilsson, R. H., Kristiansson, E., Corcoll, N.  2023  Phenotypic and transcriptomic acclimation of the green microalga Raphidocelis subcapitata to high environmental levels of the herbicide diflufenican.  Sci. Total Environ., 875, 162604 (article ID). Desmodesmus sp. NIES-96,
Microcystis aeruginosa NIES-298
Davison, J. R., Rajwani, R., Zhao, G., Bewley, C. A.  2023  The genome of antibiotic-producing colonies of the Pelagophyte alga Chrysophaeum taylorii reveals a diverse and non-canonical capacity for secondary metabolism.  Sci Rep, 13, 11944 (article ID). Chrysophaeum taylorii NIES-1699
Gao, S., Pittman, K., Edmundson, S., Huesemann, M., Greer, M., Louie, W., Chen, P., Nobles, D., Benemann, J., Crowe, B.  2023  A newly isolated alkaliphilic cyanobacterium for biomass production with direct air CO2 capture.  J. CO2 Util., 69, 102399 (article ID). Geminocystis sp. NIES-3709
Glass, S. E., McCourt, R. M., Gottschalk, S. D., Lewis, L. A., Karol, K. G.  2023  Chloroplast genome evolution and phylogeny of the early-diverging charophycean green algae with a focus on the Klebsormidiophyceae and Streptofilum.  J. Phycol., 59, 1133-1146. Mesostigma viride NIES-477
Hamana, K., Furuchi, T., Hayashi, H., Uemura, T., Niitsu, M.  2023  Additional polyamine analysis of the algae belonging to the phyla Glaucophyta, Rhodophyta and Chlorophyta. ─Polyamine analysis of algae V─  Microb. Resour. Syst., 39, 33-40. Asterochloris cf. glomerata NIES-1298,
Auxenochlorella protothecoides NIES-2165, NIES-2163,
Handa, S., Nakahara-Tsubota, M., Shoda, I., Mizobuchi, A., Nakano, T., Tsubota, H.  2023  Trentepohlia brevicellulis comb. et stat. nov. (Trentepohliaceae, Ulvophyceae) found in Japan.  Phycol. Res. Trentepohlia aurea NIES-2349, NIES-2350, NIES-2651, NIES-2652 Trentepohlia brevicellulis NIES-2653, さらに表示する
Hano, T. & Tomaru, Y.  2023  Chronological age-related metabolome responses in the dinoflagellate Karenia mikimotoi, can predict future bloom demise.  Commun. Biol., 6, 273 (article ID). Chaetoceros tenuissimus NIES-3715
Hongo, Y., Hano, T., Yamaguchi, H., Tamaru, Y.  2023  Transcriptional responses of the marine diatom Chaetoceros tenuissimus to phosphate deficiency.  Gene, 884, 147695 (article ID). Chaetoceros tenuissimus NIES-3715
Hou, X., Yan, Y., Wang, Y., Jiang, T., Zhang, X., Dai, X., Igarashi, Y., Luo, F., Yang, C.  2023  An insight into algicidal characteristics of Bacillus altitudinis G3 from dysfunctional photosystem and overproduction of reactive oxygen species.  Chemosphere, 310, 136767 (article ID). Microcystis aeruginosa NIES-843
Inaba, K., Hiraka, K., Kumagai, K., Hokura, A.  2023  Tellurium nanorods produced by the reduction of tellurate and tellurite inside unicellular algae.  Chem. Lett., 52, 284-288. Pseudococcomyxa simplex NIES-2713
Ishitani, Y., Ciacci, C., Ujiié, Y., Tame, A., Tiboni, M., Tanifuji, G., Inagaki, Y., Frontalini, F.  2023  Fascinating strategies of marine benthic organisms to cope with emerging pollutant: Titanium dioxide nanoparticles.  Environ. Pollut., 330, 121538 (article ID). Dunaliella salina NIES-2257
Joun, J., Sirohi, R., Sim, S. J.  2023  The effects of acetate and glucose on carbon fixation and carbon utilization in mixotrophy of Haematococcus pluvialis.  Bioresour. Technol., 367, 128218 (article ID). Haematococcus lacustris NIES-144
Kawaguchi, Y. W., Tsuchikane, Y., Tanaka, K., Taji, T., Suzuki, Y., Toyoda, A., Ito, M., Watano, Y., Nishiyama, T., Sekimoto, H., Tsuchimatsu, T.  2023  Extensive copy number variation explains genome size variation in the unicellular Zygnematophycean alga, Closterium peracerosum–strigosum–littorale complex.  Genome Biol. Evol., 15, evad115 (article ID). Closterium peracerosum-strigosum-littorale complex NIES-53, NIES-54, NIES-58, NIES-59, NIES-62, NIES-63, さらに表示する
Kang, S., Kim, K.-H., Chung, N., Li, Z.  2023  A new omega-3 rich euglenoid Eutreptiella sp. from the Korean coastal waters.  Algal Res., 75, 103296 (article ID). Euglena gracilis NIES-47,
Eutreptiella gymnastica NIES-381,
Eutreptiella sp. NIES-2305
Kato, S., Misumi, O., Maruyama, S., Nozaki, H., Tsujimoto-Inui, Y., Takusagawa, M., Suzuki, S., Kuwata, Noda, S., Ito, N., Okabe, Y., Sakamoto, Yagisawa, Y., Matsunaga, M. T., Matsubayashi, Y., Yamaguchi, H., Kawachi, M., Kuroiwa, H., Kuroiwa, T., Matsunaga, S.  2023  Genomic analysis of an ultrasmall freshwater green alga, Medakamo hakoo.  Commun. Biol., 6, 89 (article ID). Medakamo hakoo NIES-4000
Kim, J.-H., Park, B. S., Kim, J. H.  2023  Comprehensive understanding of the life history of harmful raphidophyte Heterosigma akashiwo: Integrating in situ and in vitro observations.  Harmful Algae, 129, 102521 (article ID). Heterosigma akashiwo NIES-5, NIES-293
Kinegawa, R., Gala de Pablo, J., Wang, Y., Hiramatsu, K., Goda, K.  2023  Label-free multiphoton imaging flow cytometry.  Cytom. Part A Chromochloris zofingiensis NIES-2175
Leblond, J. D., Hollingsworth, B. E., Ayoub, D., Mckinnon, M. B., Myers, C. S., Busari, T. J., Sabir, K.  2023  Galactolipid composition of the star-shaped dinoflagellate Asterodinium gracile (Kareniaceae): presence of hexadecatetraenoic acid (16:4(n-3))-containing monogalactosyldiacylglycerol as the predominant galactolipid and chemotaxonomic closeness to Karenia mikimotoi as the only other known Kareniacean producer of this fatty acid.  Phycol. Res. Asterodinium gracile NIES-4329
Lee, A. K., Wei, J. H., Welander, P. V.  2023  De novo cholesterol biosynthesis in bacteria.  Nat. Commun., 14, 2904 (article ID). Calothrix sp. NIES-4105
Li, Z.-M., Hu, Z., Wang, X., Chen, S., Yu, W., Liu, J., Li, Z  2023  Biochemical and Structural Insights into a Thiamine Diphosphate-Dependent α-Ketoglutarate Decarboxylase from Cyanobacterium Microcystis aeruginosa NIES-843.  Int. J. Mol. Sci., 24, 12198 (article ID). Microcystis aeruginosa NIES-843
Liu, Y. & Wei, D.  2023  Enhancing carbon dioxide fixation and co-production of protein and lutein in oleaginous Coccomyxa subellipsoidea by a stepwise light intensity and nutrients feeding strategy.  Bioresour. Technol., 376, 28885 (article ID). Coccomyxa subellipsoidea NIES-2166
Ma, H., Zheng, J., Li, Y., Zhao, L., Zou, S., Hu, Q., Ha,n D.  2023  A novel bifunctional wax ester synthase involved in early triacylglycerol accumulation in unicellular green microalga Haematococcus pluvialis under high light stress.  Front. Bioeng. Biotechnol., 9, 794714 (article ID). Haematococcus lacustris NIES-144
Magalhães, B. D., Matricon, L., Romero, L. A. R., Checa, R., Lorentz, C., Chambonniere, P., Delrue, F., Roubaud, A., Afanasiev, P., Laurenti, D., Geantet, C.  2023  Catalytic hydrotreatment of bio-oil from continuous HTL of Chlorella sorokiniana and Chlorella vulgaris microalgae for biofuel production.  Biomass Bioenerg, 173, 106798 (article ID). Chlorella vulgari var. vulgari NIES-227,
Scenedesmus bijuga NIES-2273
Mao, J. F., Li, W., Liu, X., He, Y., Gin, K. Y.-H.  2023  Responses of cyanobacterium Microcystis aeruginosa under single and repeated ofloxacin exposure.  Ecotox. Environ. Safe., 253, 114668 (article ID). Microcystis aeruginosa NIES-843
Marinič, D., Grilc, M., Hočevar, B., Delrue, F., Likozar, B.  2023  Liquefaction, cracking and hydrogenation of microalgae biomass resources to CO2 negative advanced biofuels: Mechanisms, reaction microkinetics and modelling.  Renew. Energy, 203, 382-393. Chlorella sorokiniana NIES-2173
Martin, R. M., Denney, M. K., Pound, H. L., Chaffin, J. D., Bullerjahn, G. S., McKay, R. M. L., Zastepa, A., Jones, K. A., Castro, H. F., Campagna, S. R., Wilhelm, S. W.  2023  Sulfolipid substitution ratios of Microcystis aeruginosa and planktonic communities as an indicator of phosphorus limitation in Lake Erie.  Limnol. Oceanogr., 68, 1117-1131. Microcystis aeruginosa NIES-843
McGregor, G. B., Sendall, B. C., Niiyama, Y., Tuji, A., Willis, A.  2023  Chrysosporum ovalisporum is synonymous with the true-branching cyanobacterium Umezakia natans (Nostocales/Aphanizomenonaceae).  J. Phycol., 59, 326-341. Anabaenopsis circularis NIES-21,
Nodularia sp. NIES-3585,
Nostoc minutum NIES-26
Moia, I. C., Pereira, S. B., Domizio, P., De Philippis, R., Adessi, A.  2023  Phormidium ambiguum and Leptolyngbya ohadii exopolysaccharides under low water availability.  Polymers, 15, 1889 (article ID). Phormidium sp. NIES-2121
Nagao, R., Ueno, Y., Furutani, M., Kato, K., Shen, J.-R., Akimoto, S.  2023  Biochemical and spectroscopic characterization of PSI‑LHCI from the red alga Cyanidium caldarium.  Photosynth. Res., 156, 315–323. Cyanidium caldarium NIES-2137
Nagi, G. K., Goel, M., Tiwari, R., Bhawna, Gaur, S., Mallick, N., Mandal, S.  2023  Simultaneous production of bio-crude bio-oil via hydrothermal liquefaction and carotenoids via supercritical extraction from Nannochloropsis oceanica and recycling effluent to establish circular processes.  J. Clean Prod., 428, 13945 (article ID). Nannochloropsis oceanica NIES-2145
Nakanishi, A., Nemoto, S., Yamamoto, N., Iritani, K., Watanabe, M.  2023  Identification of cell-attachment factors derived from green algal cells disrupted by sonication in fabrication of cell plastics.  Bioengineering-Basel, 10, 893 (article ID). Chlamydomonas reinhardtii NIES-2235
Nozaki, H., Mori, F., Tanaka, Y., Matsuzaki, R., Yamashita, S., Yamaguchi, H., Kawachi, K.  2023  Cryopreservation of two species of the multicellular volvocine green algal genus Astrephomene.  BMC Microbiol., 23, 16 (article ID). Astrephomene gubernaculifera NIES-418, NIES-419, NIES-628, NIES-853,
Ok, J. H., Jeong, H. J., Lim, A. S., Kang, H. C., You, J. H., Park, S. A., Eom, S. H.  2023  Lack of mixotrophy in three Karenia species and the prey spectrum of Karenia mikimotoi (Gymnodiniales, Dinophyceae).  Algae, 38, 39-55. Karenia mikimotoi NIES-2411,
Karenia selliformis NIES-4541
Okuda, Y., Hiraiwa, M., Shimizu, N., Hashimoto, S.  2023  Production of volatile organic iodine compounds by the marine cyanobacterium Calothrix parasitica under different light intensities.  Mar. Chem., 248, 104211 (article ID). Calothrix parasitica NIES-267
Ota, S., Yoshimura, K., Kosugi, C., Kawano, S.  2023  Taxonomic and physiological studies of Parachlorella kimitsuensis sp. nov. (Trebouxiophyceae), which shows high ammonium tolerance.  Algal Res., 71, 103054 (article ID). Chlorella kessleri NIES-2152,
Chlorella sorokiniana NIES-2169,
Scenedesmus bijuga NIES-2273
Pang, X., Nawrocki, W. J., Cardol, P., Zheng, M., Jiang, J., Fang, Y., Yang, W., Croce, R., Tian, L.  2023  Weak acids produced during anaerobic respiration suppress both photosynthesis and aerobic respiration.  Nat. Commun., 14, 4207 (article ID). Chlamydomonas eustigma NIES-2499
Park, S. I., Cho, C. H., Ciniglia, C., Huang, T.-Y., Liu, S.-L., Bustamante, D. E., Calderon, M. S., Mansilla, A., McDermott, T., Andersen, R. A., Yoon, H. S.  2023  Revised classification of the Cyanidiophyceae based on plastid genome data with descriptions of the Cavernulicolales ord. nov. and Galdieriales ord. nov. (Rhodophyta).  J. Phycol. Galdieria javensis NIES-3638
Procházková, L., Matsuzaki, R., Řezanka, T., Nedbalová, L., Remias, D.  2023  The snow alga Chloromonas kaweckae sp. nov. (Volvocales, Chlorophyta) causes green surface blooms in the High Tatras (Slovakia) and tolerates high irradiance.  . Phycol. Chloromonas krienitzii NIES-3753,
Chloromonas miwae NIES-2379,
Chloromonas muramotoi NIES-4284
Ramírez-Romero, A., Martin, M., Boyer, A., Bolzoni, R., Matricon, L., Sassi, J.-F., Steyer, J.-P., Delrue, F.  2023  Microalgae adaptation as a strategy to recycle the aqueous phase from hydrothermal liquefaction.  Bioresour. Technol., 371, 128631 (article ID). Chlorella vulgaris var. vulgaris NIES-227
Saito, M., Watanabe, H., Sasaki, M., Ookubo, M., Yarita, T., Shiraiwa, M., Asayama, M.  2023  Coproduction of lipids and carotenoids by the novel green alga Coelastrella sp. depending on cultivation conditions.  Biotech. Rep. Haematococcus lacustris NIES-144
Seger, M., Mammadova, F., Villegas-Valencia, M., de Freitas, B. B., Chang, C. R. S., Isachsen, I., Hemstreet, H., Abualsaud, F., Boring, M., Lammers, P. J., Lauersen, K. J.  2023  Engineered ketocarotenoid biosynthesis in the polyextremophilic red microalga Cyanidioschyzon merolae 10D.  Metab. Eng. Commun., 17, e00226 (article ID). Cyanidioschyzon merolae NIES-3377
Sekimoto, H., Komiya, A., Tsuyuki, N., Kawai, J., Kanda, N., Ootsuki, R., Suzuki, Y., Toyoda, A., Fujiyama, A., Kasahara, M., Abe, J., Tsuchikane, Y., Nishiyama, T.  2023  A divergent RWP-RK transcription factor determines mating type in heterothallic Closterium.  New Phytol. Closterium peracerosum-strigosum-littorale complex NIES-67, NIES-68
Senavirathna, M. D. H. J. & Jayasekara, M. A. D. D.  2023  Temporal variation of 2-MIB and geosmin production by Pseudanabaena galeata and Phormidium ambiguum exposed to high-intensity light.  Water Environ. Res., 95, e10834 (article ID). Phormidium ambiguum NIES-2119,
Pseudanabaena foetida var. intermedia NIES-512
Shikata, T., Kitatsuji, S., Yuasa, K.  2023  Strain, cell density, and nutrient condition affect patterns of diurnal vertical migration and superoxide production in a red-tide alga.  Front. Cell. Dev. Biol., 11, 1134227 (article ID). Chattonella marina var. antiqua NIES-1
Shiraishi, H. & Nishida, H.  2023  Complete genome sequence of the edible filamentous cyanobacterium Arthrospira platensis NIES-39, based on long-read sequencing.  Microbiol. Resour. Ann., 12, e0113922 (article ID). Arthrospira platensis NIES-39
Takagi, T., Aoyama, K., Motone, K., Aburaya, S., Yamashiro, H., Miura, N., Inoue, K.  2023  Mutualistic interactions between dinoflagellates and pigmented bacteria mitigate environmental stress.  Microbiol. Spectr. Cladocopium sp. NIES-4077
Takahashi, K., Suzuki, S., Kawai-Toyooka, H., Yamamoto, K., Hamaji, T., Ootsuki, R., Yamaguchi, H., Kawachi, M., Higashiyama, T., Nozaki, H.  2023  Reorganization of the ancestral sex-determining regions during the evolution of trioecy in Pleodorina starrii.  Commun. Biol., 6, 590 (article ID). Pleodorina starrii NIES-1363, NIES-4479, NIES-4480, NIES-4481, NIES-4482
Takahashi, Y., Shimamoto, K., Toyokawa, C., Suzuki, K., Osanai, T.  2023  Gravity sedimentation of eukaryotic algae Euglena gracilis accelerated by ethanol cultivation.  Appl. Microbiol. Biotechnol. Euglena gracilis NIES-48
Tamaki, S., Koshitsuka, Y., Miyamoto, K., Ishikawa, T., Shinomura, T.  2023  Euglena gracilis; carotenoid; norflurazon; dark acclimation; posttranscriptional regulation  Biosci. Biotechnol. Biochem., 87, 491-500. Euglena gracilis NIES-48 NIES-48
Tansley, C., Houghton, J., Rose, A. M. E., Witek, B., Payet, R. D., Wu, T., Miller, J. B.  2023  CIPK-B is essential for salt stress signalling in Marchantia polymorpha.  New Phytol., 237, 2210-2223. Klebsormidium nitens NIES-2285
Tounosu, N., Sesoko, K., Hori, K., Shimojima, M., Ohta, H.  2023  Cis‑regulatory elements and transcription factors related to auxin signaling in the streptophyte algae Klebsormidium nitens.  Sci Rep, 13, 9635 (article ID). Klebsormidium nitens NIES-2285
Tuji, A., Niiyama, Y., Ichise, S.  2023  Distribution and phylogeny of Dolichospermum hangangense (Nostcales, Cyanobacteria) found in Japanese lakes and reservoirs.  Bull. Natl. Mus. Nat. Sci., Ser. B, 49, 83-95. Dolichospermum hangangense NIES-80, NIES-811, NIES-823, NIES-1682, NIES-1683,
Velmurugan, A. & Muthukaliannan, G. K.  2023  Homologous and heterologous expression of phytoene synthase gene in marine microalgae Dunaliella salina and its potential as aquaculture feed.  Aquac. Int. Haematococcus lacustris NIES-144
Watanabe, S., Mezaki, N., Nakada, T.  2023  Ultrastructure and phylogeny of Parietochloris toyamaensis sp. nov. and P. bilobata (Trebouxiophyceae).  Eur. J. Phycol. Parietochloris toyamaensis NIES-3574
Wijesinghe, A., Senevirathna, M. D. H. J., Fujino, T.  2024  Egeria densa organic extracts: an eco-friendly approach to suppress Microcystis aeruginosa growth through allelopathy.  Water Sci. Technol., 88, 2955 (article ID). Microcystis aeruginosa NIES-111
Wong, D. K., Grisdale, C. J., Slat, V. A., Rader, S. D., Fast, N. M.  2023  The evolution of pre-mRNA splicing and its machinery revealed by reduced extremophilic red algae.  J. Eukaryot. Microbiol., 70, e12927 (article ID). Cyanidioschyzon merolae NIES-1332
Xiao, C. Guo, N., Liang, Z., Huang, Z., Li, W., Xie, M., Zhao, F.  2023  Ultrafast energy transfer dynamics in a cyanobacterial light-harvesting phycobilisome.  Processes, 11, 1656 (article ID). Thermosynechococcus vulcanus NIES-2134
Xing, H., Li, Q., Zhao, Y., Gao, H., Li, L., Zhang, Y., Yu, X.  2023  Exogenous proline boosts the co-accumulation of astaxanthin and biomass in stress-induced Haematococcus pluvialis.  Bioresour. Technol., 369, 128488 (article ID). Chroomonas caudata NIES-712,
Desmodesmus subspicatus NIES-797,
Haematococcus lacustris NIES-144
Yabuki, A., Tame, A., Mizuno, K.  2023  Podomonas kaiyoae n. sp., a novel apusomonad growing axenically.  J. Eukaryot. Microbiol. Podomonas kaiyoae NIES-4540
Yamagishi, S., Yamamoto, K., Takahashi, K., Kawai-Toyooka, H., Suzuki, S., Matsuzaki, R., Yamaguchi, H., Kawachi, M., Higashiyama, T., Nozaki, H.  2023  Evolutionary analysis of MID homologs during the transition from homothallic species to heterothallic species in Volvox sect. Volvox (Chlorophyceae).  Phycol. Res. Colemanosphaera angeleri NIES-3382,
C. charkowiensis NIES-3383,
Eudorina elegans var. elegans NIES-456,
Yamaguchi, H., Sumida, N., Matsukawa, K., Adachi, M., Tomaru, Y., Ishikawa, K., Hotta, J.  2023  Establishment of a simple method for cryopreservation of the marine diatoms, Chaetoceros and Phaeodactylum.  J. Appl. Phycol. Chaetoceros tenuissimus NIES-3714, NIES-3715,
Skeletonema marinoi-dohrnii complex NIES-324
Yamamoto, K., Matsuzaki, R., Mahakham, W., Heman, W., Sekimoto, H., Kawachi, M., Minakuchi, Y., Toyoda, A., Nozaki, H.  2023  Expanded male sex-determining region conserved during the evolution of homothallism in the green alga Volvox.  iScience, 26, 106893 (article ID). Volvox africanus NIES-3780, NIES-4468
Volvox reticuliferus NIES-3785, NIES-3786468
Yang, H. E., Yu, B. S., Sim, S. J.  2023  Enhanced astaxanthin production of Haematococcus pluvialis strains induced salt and high light resistance with gamma irradiation.  Bioresour. Technol., 372, 128651 (article ID). Haematococcus lacustris NIES-144
Zhu, J., Tan, X., Hafid, H. S., Wakisaka, M.  2023  A novel strategy to promote microalgal growth and lipid productivity by supplementation of lignin related phenolic elicitors.  Fuel, 334, 126775 (article ID). Euglena gracilis NIES-48