1. Reference list published in 2022

Reference Strain (s)
Abe, M., Okuda, Y., Hashimoto, S.  2022  Effects of light intensity on the production of VSLs from the marine diatom Ditylum brightwellii.  J. Atmos. Chem., 79, 1-16. new Ditylum brightwellii NIES-350
Grzebyk, D., Pasqualini, V., Garrido, M., Quilichini, Y., Pereto, C., Cecchi, P.  2022  Insight into the morphology and genetic diversity of the Chaetoceros tenuissimus (Bacillariophyta) species complex.  Eur. J. Phycol. new Chaetoceros tenuissimus NIES-3715
Hirayama, A., Sueyoshi, M. N., Nakano, T., Ota, Y., Kurita, H., Tasaki, M., Kuroiwa, Y., Kato, T., Serizawa, S., Kojima, K., Al-Maamari, R. S., Hasegawa, T., Thomas-Hall, S. R., Schenk, P. M.  2022  Development of large-scale microalgae production in the Middle East.  Bioresour. Technol., 343, 126036 (article ID). Chlorella sorokiniana NIES-2169
Iwataki, M., Lum, W. M., Kuwata, K., Takahashi, K., Arima, D., Kuribayashi, T., Kosaka, Y., Hasegawa, N., Watanabe, T., Shikata, T., isada, T., Orlova, T. Y., Sakamoto, S.  2022  Morphological variation and phylogeny of Karenia selliformis (Gymnodiniales, Dinophyceae) in an intensive cold-water algal bloom in eastern Hokkaido, Japan.  Harmful Algae, 114, 102204 (article ID). new Karenia selliformis NIES-4541, NIES-4542, NIES-4543, NIES-4544
Jester, B.W., Zhao, H., Gewe, M. et al.  2022  Development of spirulina for the manufacture and oral delivery of protein therapeutics.  Nat. Biotechnol. new Arthrospira platensis NIES-39
Kato, K., Nagao, R., Ueno, Y., Yokono, M., Suzuki, T., Jiang, T.-Y., Dohmae, N., Akita, F., Akimoto, S., Miyazaki, N., Shen, J.-R.  2022  Structure of a tetrameric photosystem I from a glaucophyte alga Cyanophora paradoxa.  Nat. Commun., 13, 1679 (article ID). new Cyanophora paradoxa NIES-547
Kawai, J., Kanazawa, M., Suzuki, R., Kikuchi, N., Hayakawa, Y., Sekimoto, H.  2022  Highly efficient transformation of the model zygnematophycean alga Closterium peracerosum-strigosum-littorale complex by square-pulse electroporation.  New Phytol., 233, 569-578.. Closterium peracerosum-strigosum-littorale complex NIES-67, NIES-68
Kurita, T., Iwai, M., Moroi, K., Okazaki, K., Nomura, S., Saito, F., Maeda, S., Takami, A., Sakamoto, A., Ohta, H., Sakuma, T., Yamamoto, T.  2022  Genome editing with removable TALEN vectors harboring a yeast centromere and autonomous replication sequence in oleaginous microalga.  Sci Rep, 12, 2480 (article ID). new Nannochloropsis oceanica NIES-2145
Le, V. V., Ko, S.-R.; Kang, M., Lee, S.-A., Oh, H.-M., Ahn, C.-Y.  2022  Algicide capacity of Paucibacter aquatile DH15 on Microcystis aeruginosa by attachment and non-attachment effects.  Environmental Pollution, 302, 119079 (article ID). new Microcystis aeruginosa NIES-843
Lee, J. E., Yu, M. N., Yu, S., Byeon, M.  2022  Occurrence and phylogenetic analysis of Pseudanabaena sp. producing 2-methylisoborneol in drinking water source of South Korea.  Environ. Microbiol. Rep., 14, 197-202. new Pseudanabaena foetida var. intermedia NIES-512
Minoda, A., Miyashita, S., Fujii, S., Inagaki, K., Takahashi, Y.  2022  Cell population behavior of the unicellular red alga Galdieria sulphuraria during precious metal biosorption.  J. Hazard. Mater., 302, 119079 (article ID). new Galdieria sulphuraria NIES-3638
Miyashita, S., Ogura, T., Kondo, T., Fujii, S., Inagaki, K., Takahashi, Y., Minoda, A.  2022  Recovery of Au from dilute aqua regia solutions via adsorption on the lyophilized cells of a unicellular red alga Galdieria sulphuraria: A mechanism study.  J. Hazard. Mater., 432, 128576 (article ID). new Galdieria sulphuraria NIES-3638
Mizoi, K., Rodríguez-González, V., Sasaki, M., Suzuki, S., Honda, K., Ishida, N., Suzuki, N., Kuchitsu, K., Kondo, T., Yuasa, M., Fujishima, A., Teshima, K., Terashima, C.  2022  Interactions between pH, reactive species, and cells in plasma-activated water can remove algae.  RSC Adv., 12, 7626-7634. new Chlorella vulgaris NIES-2170
Myint, A. A., Hariyanto, P., Irshad, M., Ruqian, C., Wulandari, S., Hong, M. E., Sim, S. J., Kim, J.  2022  Strategy for high-yield astaxanthin recovery directly from wet Haematococcus pluvialis without pretreatment.  Bioresour. Technol., 346, 126616 (article ID). Haematococcus lacustris NIES-144
Nishi, K., Akizuki, S., Toda, T., Matsuyama, T., Ida, J.  2022  Advanced light-tolerant microalgae-nitrifying bacteria consortia for stable ammonia removal under strong light irradiation using light-shielding hydrogel.  Chemosphere, 297, 134252 (article ID). new Chlorella sorokiniana NIES-2173
Purba, L. D. A., Othman, A., Yuzir, A., Mohamad, S. V., Iwamoto, K., Abdullah, N., Shimizu, K., Hermana, J.  2022  Enhanced cultivation and lipid production of isolated microalgae strains using municipal wastewater.  Environ. Technol. Innov., 27, 102444 (article ID). new Chlorella vulgaris NIES-1269
Suruzzaman, M., Cao, T., Lu, J., Wang, Y., Su, M., Yang, M.  2022  Evaluation of the MIB-producing potential based on real-time qPCR in drinking water reservoirs.  Environ. Res., 204, 112308 (article ID). Pseudanabaena foetida var. intermedia NIES-512,
P. cinerea  NIES-4062, NIES-4063,
P. yagii  NIES-4237, NIES-4238
Suzuki, S., Matsuzaki, R., Yamaguchi, H., Kawachi, M.  2022  What happened before losses of photosynthesis in cryptophyte algae?  Mol. Biol. Evol. Chroomonas collegionis NIES-703,
Chroomonas debatzensis NIES-2331,
Cryptomonas borealis NIES-276,
Temraleeva, A., Krivina, E., Boldina, O.  2022  Edaphochloris, gen. nov.: a new genus of soil green algae (Trebouxiophyceae, Chlorophyta) with simple morphology.  Plant Syst. Evol., 308, 4 (article ID). Nannochloris bacillaris NIES-4016
van Zee, M., de Rutte, J., Rumyan, R., Williamson, C., Burnes, T., Radakovits, R., Eugenio, A. S., Badih, S., Lee, S., Lee, D.-H., Archang, M., Di Carlo, D.  2022  High-throughput selection of cells based on accumulated growth and division using PicoShell particles.  Proc. Natl. Acad. Sci. U. S. A., 119, e2109430119 (article ID). new Euglena gracilis NIES-48
Watanabe, S., Mezaki, N., Nakada, T.  2022  Ultrastructure and phylogeny of Parietochloris toyamaensis sp. nov. and P. bilobata (Trebouxiophyceae).  Eur. J. Phycol. new Parietochloris toyamaensis NIES-3574
Wu, D., Yang, C., Zhang, X., Hou, X., Zhang, S., Dai, X., Zhang, X., Igarashi, Y., Luo, F.  2022  Algicidal effect of tryptoline against Microcystis aeruginosa: Excess reactive oxygen species production mediated by photosynthesis.  Sci. Total Environ., 806, 150719 (article ID). new Microcystis aeruginosa NIES-843
Yamasaki, Y., Hirayama, R., Yamamoto, A., Yuasa, K., Shikata, T.  2022  Effects of micronutrients on the detection of extracellular superoxide produced by the harmful raphidophyte Chattonella antiqua in culture.  , 44, 36–47. Chattonella marina var. antiqua NIES-1

2. Reference list published in 2021

Reference Strain (s)
Agarkova, I. V., Lane, L. C., Dunigan, D. D., Quispe, C. F., Duncan, G. A., Milrot, E., Minsky, A., Esmael, A., Ghosh, J. F., Van Etten, J. L.  2021  Identification of a chlorovirus PBCV-1 protein involved in degrading the host cell wall during virus infection.  Viruses-Basel, 13, 782 (article ID). Chlorella variabilis NIES-2540, NIES-2541
Águila, B., Alcántara-Hernández, R. J., Montejano, G., López-Martínez, R., Falcón, L. I., Becerra-Absalón, I.  2021  Cyanobacteria in microbialites of Alchichica Crater Lake: a polyphasic characterization.  Eur. J. Phycol. Chroococcidium sp. NIES-4398,
Myxosarcina sp. NIES-4397,
Nodosilinea sp. NIES-4394 more
Al-Azab, A. J. S., Widyaningrum, D., Hirakawa, H., Hayashi, Y., Tanaka, S., Ohama, T.  2021  A resin cyanoacrylate nanoparticle as an acute cell death inducer to broad spectrum of microalgae.  Algal Res., 54, 102191 (article ID). Amphidinium carterae NIES-331,
Calyptrosphaera sphaeroidea NIES-1308,
Chattonella marina var. antiqua NIES-1,
Aoi, J., Sasaki, D., Asayama, M.  2021  Development of a method for phycocyanin recovery from filamentous cyanobacteria and evaluation of its stability and antioxidant capacity.  BMC Biotechnol., 21, 40 (article ID). Arthrospira platensis NIES-39
Arii, S., Yamashita, R., Tsuji, K., Tomita, K., Hasegawa, M., Bober, B., Harada, K.  2021  Differences in susceptibility of cyanobacteria species to lytic volatile organic compounds and influence on seasonal succession.  Chemosphere, 284, 131378 (article ID). Aphanizomenon flos-aquae NIES-1728,
Dolichospermum affine NIES-1642,
D. crassum NIES-1652,
Aso, M., Matsumae, R., Tanaka, A., Tanaka, R., Takabayashi, A.  2021  Unique peripheral antennas in the photosystems of the streptophyte alga Mesostigma viride.  Plant Cell Physiol. Mesostigma viride NIES-296
Barcytė, D., Eikrem, W., Engesmo, A., Seoane, S., Wohlmann, J., Horák, A., Yurchenko, T., Eliáš, M.  2021  Olisthodiscus represents a new class of Ochrophyta.  J. Phycol. Olisthodiscus tomasii NIES-15
Bhattad, T., Koradiya, A., Prakash, G.  2021  Prebiotic activity of paramylon isolated from heterotrophically grown Euglena gracilis.  Heliyon Euglena gracilis NIES-48
Bock, N. A., Charvet, S., Burns, J., Gyaltshen, Y., Rozenberg, A., Duhamel ,S., Kim, E.  2021  Experimental identification and in silico prediction of bacterivory in green algae.  ISME J. Mesostigma viride NIES-296, NIES-995,
Pterosperma cristatum NIES-626,
Pyramimonas parkeae NIES-254
Cao, H., Shimura, Y., Steffen, M. M., Yang, Z., Lu, J., Joel, A., Jenkins, L., Kawachi, M., Yin, Y., Garcia-Pichel, F.,  2021  The trait repertoire enabling cyanobacteria to bloom assessed through comparative genomic complexity and metatranscriptomics.  mBio, 11, e01155-20 (article ID). Microcystis aeruginosa NIES-843,
Oscillatoria laetevirens NIES-31
Cho, S. J., Sung, Y. J., Lee, J. S., Yu, B. S., Sim, S. J.  2021  Robust cyst germination induction in Haematococcus pluvialis to enhance astaxanthin productivity in a semi-continuous outdoor culture system using power plant flue gas.  Bioresour. Technol., 338, 125533 (article ID). Haematococcus lacustris NIES-144
Cho, Y., Hidema, S., Omura, T., Koike, K., Koike, K., Oikawa, H., Konoki, K., Oshima, Y., Yotsu-Yamashita, M.  2021  SxtA localizes to chloroplasts and changes to its 3′UTR may reduce toxin biosynthesis in non-toxic Alexandrium catenella (Group I).  Harmful Algae, , 101972 (article ID). Alexandrium insuetum NIES-678
Delrue, F., Cerqueira, M. R. D., Compadre, A., Alvarez, P., Fleury, G., Escoffier, C., Sassi, J. F.  2021  Hydroponic farm wastewater treatment using an indigenous consortium.  Processes, 9, 519 (article ID). Chlorella vulgaris NIES-227,
Parachlorella kessleri NIES-2152
Fitriana, H.-N., Lee, S.-Y., Choi, S.-A., Lee, J.-Y., Kim, B.-L., Lee, J.-S., Oh, Y.-K.  2021  Electric stimulation of astaxanthin biosynthesis in Haematococcus pluvialis.  Appl. Sci., 11, 3384 (article ID). Haematococcus lacustris NIES-144
Fritzsche, S., Blenk, P., Christian, J., Castiglione, K., Becke,r A. M.  2021  Inhibitory properties of microalgal extracts on the in vitro replication of cyprinid herpesvirus 3.  bioRXiv Arthrospira platensis NIES-39
Galica, T., Borbone, N., Mareš, J., Kust, A., Caso, A., Esposito, G., Saurav, K., Hájek, J., Řeháková, K., Urajová, P., Costantino, V., Hrouzek, P.  2021  Cyanochelins, an overlooked class of widely distributed cyanobacterial siderophores, discovered by silent gene cluster awakening.  Appl. Environ. Microbiol. Leptolyngbya sp. NIES-3755
Gu, S., Dai, X., Niu, Q., Jiang, J., Liu, Y.  2021  Molecular, structural and biochemical characterization of a novel recombinant chlorophyllase from cyanobacterium Oscillatoria acuminata PCC 6304.  Microb. Cell. Fact., 20, 14 (article ID). Nostoc punctiforme NIES-2108
Gu, Y., Tobino, T., Nakajima, F.  2021  Determining the relative importance of dietborne and waterborne toxicity of 4-tert-butylphenol and 4-tert-octylphenol to the benthic crustacean, Heterocypris incongruens.  Environ. Sci. Technol., 55, 7939–7948. Chlorella vulgaris NIES-2170,
Closterium acerosum NIES-124,
Desmodesmus subspicatus NIES-797,
Scenedesmus acutus NIES-94
Harada, N., Hirose, Y., Chihong, S., Kurita, H., Sato, M., Onodera, J., Murata, K., Itoh, F.  2021  A novel characteristic of a phytoplankton as a potential source of straight-chain alkanes.  Sci Rep, 11, 14190 (article ID). Emiliania huxleyi NIES-3367,
Dicrateria rotunda NIES-1001, NIES-2779, NIES-2780
new Haraguchi, Y., Shimizu, T.  2021  Microalgal culture in animal cell waste medium for sustainable 'cultured food' production.  Arch. Microbiol., 203, 5525–5532. Chlorella vulgaris NIES-2170
Haraguchi, Y., Shimizu, T.  2021  Three-dimensional tissue fabrication system by co-culture of microalgae and animal cells for production of thicker and healthy cultured food.  Biotechnol. Lett. Chlorella vulgaris NIES-2170
new Hirose, Y., Ohtsubo, Y., Misawa, N., Yonekawa, C., Nagao, N., Shimura, Y., Fujisawa, T., Kanesaki, Y., Katoh, H., Katayama, M., Yamaguchi, H., Yoshikawa, H., Ikeuchi, M., Eki, T., Nakamura, Y., Kawachi, M.  2021  Genome sequencing of the NIES Cyanobacteria collection with a focus on the heterocyst-forming clade.  DNA Res., 28, dsab024 (article ID). Anabaena cylindrica NIES-19,
Anabaenopsis circularis NIES-21,
Anabaena variabilis NIES-23
new Hongo, Y., Kimura, K., Takaki, Y., Yoshida, Y., Baba, S., Kobayashi, G., Nagasaki, K., Hano, T., Tomaru, Y.  2021  The genome of the diatom Chaetoceros tenuissimus carries an ancient integrated fragment of an extant virus.  Sci Rep, 11, 22877 (article ID). Chaetoceros tenuissimus NIES-3715
new Irisarri, I., Darienko, T., Pröschold, T., Fürst-Jansen, J. M. R., Jamy, M., de Vries, J.  2021  Unexpected cryptic species among streptophyte algae most distant to land plants.  Proc. R. Soc. B-Biol. Sci., 288, 20212168 (article ID). Chlorokybus sp.  NIES-160
Hoshina, R., Tsukii, Y., Harumoto, T., Suzaki, T.  2021  Characterization of a green Stentor with symbiotic algae growing in an extremely oligotrophic environment and storing large amounts of starch granules in its cytoplasm.  Sci Rep, 11, 2865 (article ID). Chlorogonium capillatum NIES-3374
Jangir, M. M., Chowdhury, S., Bhagavatula, V.  2021  Differential response of photosynthetic apparatus towards alkaline pH treatment in NIES-39 and PCC 7345 strains of Arthrospira platensis.  Int. Microbiol., 24, 219-231. Arthrospira platensis NIES-39
Jeong, S.-Y., Son, H.-J.  2021  Effects of mycosubtilin homolog algicides from a marine bacterium, Bacillus sp. SY-1, against the harmful algal bloom species Cochlodinium polykrikoides.  J. Microbiol., 59, 389-400. Anabaena variabilis NIES-23,
Chlamydomonas tetragama NIES-446,
Chlorella vulgaris var. vulgaris NIES-227 more
Jester, B. et al.  2021  Expression and manufacturing of protein therapeutics in spirulina.  bioRXiv Arthrospira platensis NIES-39
Jiang, M., Nakano, S.  2021  Application of image analysis for algal biomass quantifcation: a low‑cost and non‑destructive method based on HSI color space.  J. Appl. Phycol. Aulacoseira granulata NIES-333,
Chlorella vulgaris NIES-2172
Jiang, R., Qin, L., Feng, S., Huang, D., Wang, Z., Zhu, S.  2021  The joint effect of ammonium and pH on the growth of Chlorella vulgaris and ammonium removal in artificial liquid digestate.  Bioresour. Technol., 325, 124690 (article ID). Chlorella vulgaris var. vulgaris NIES-221
Jong, L. W., Fujiwara, T., Hirooka, S., Miyagishima, S.  2021  Cell size for commitment to cell division and number of successive cell divisions in cyanidialean red algae.  Protoplasma Cyanidioschyzon merolae NIES-3377
Kato, S., Nam, H. G.  2021  The cell division cycle of Euglena gracilis indicates that the level of circadian plasticity to the external light regime changes in prolonged-stationary cultures.  Plants-Basel, 10, 1475 (article ID). Euglena gracilis NIES-48
Kawachi, M., Nakayama, T., Kayama, M., Nomura, M., Miyashita, H., Bojo, O., Rhodes, L., Sym, S., Pienaar, R. N., Probert, I., Inouye, I., Kamikawa, R.  2021  Rappemonads are haptophyte phytoplankton.  Curr. Biol. Pavlomulina ranunculiformis NIES-3900
Kobayashi, A., Takayama, Y., Hirakawa, T., Okajima, K., Oide, M., Oroguchi, T., Inui, Y., Yamamoto, M., Matsunaga, S., Nakasako, M.  2021  Common architectures in cyanobacteria Prochlorococcus cells visualized by X-ray diffraction imaging using X-ray free electron laser.  Sci Rep, 11, 3877 (article ID). Prochlorococcus marinus NIES-2087
Li, B., Li, J., An, G., Zhao, C., Wang, C.  2021  Long-term and strong suppression against Microcystis growth and microcystin-release by luteolin continuous-release microsphere: Optimal construction, characterization, effects and proteomic mechanisms.  Water Res., 202, 117448 (article ID). Microcystis aeruginosa NIES-102,  NIES-298
new Lindsey, C. R., Rosenzweing, F., Herron, M. D.  2021  Phylotranscriptomics points to multiple independent origins of multicellularity and cellular differentiation in the volvocine algae.  BMC Biol., 19, 182 (article ID). Astrephomene gubernaculifera NIES-418,
A. perforata NIES-564,
Basichlamys sacculifera NIES-566,
Maeda, I., Kudou, S., Iwai, S.  2021  Efficient isolation and cultivation of endosymbiotic Chlorella from Paramecium bursaria on agar plates by co-culture with yeast cells.  J. Microbiol. Methods, 186, 106254 (article ID). Chlorella vulgari var. vulgari NIES-227
Makita, Y., et al.  2021  Identification of a dual orange/far-red and blue light photoreceptor from an oceanic green picoplankton.  Nat. Commun., 12, 3593 (article ID). Pycnococcus provasolii NIES-2893
Matsuzaki, R., Suzuki, S., Yamaguchi, H., Kawachi, M., Kanesaki, Y., Yoshikawa, H., Mori, T., Nozaki, H.  2021  The Rubisco small subunits in the green algal genus Chloromonas provide insights into evolutionary loss of the eukaryotic carbon-concentrating organelle, the pyrenoid  BMC Ecol. Evol., 21, 11 (article ID). Carteria cerasiformis NIES-424, NIES-425,
Chlamydomonas asymmetrica NIES-2207,
new Mikulic, P., Beardall, J.  2021  Oxidative and anti-oxidative responses to metal toxicity in an extremophilic alga (Cyanidium caldarium) and a neutrophilic alga (Chlamydomonas reinhardtii).  Phycologia, 60, 513-523. Cyanidium caldarium NIES-2529
Miyauchi, H., Harada, K., Suzuki, Y., Okada, K., Aoki, M., Umemura, T., Fujiwara,S., Tsuzuki, M.  2021  Development of an algal cell-attached solid surface culture system for simultaneous wastewater treatment and biomass production.  Agal Res., 58, 102394 (article ID). Parachlorella kessleri NIES-2160
Mizukami-Murata, S., Suzuki, Y., Sakurai, K., Yamashita, H.  2021  Freshwater alga Raphidocelis subcapitata undergoes metabolomic changes in response to electrostatic adhesion by micrometer-sized nylon 6 particles.  Environ. Sci. Pollut. Res. Raphidocelis subcapitata NIES-35
Nagao, R., Yokono, M., Kato, K., Ueno, Y., Shen, J.-R., Akimoto, S.  2021  High‑light modifcation of excitation‑energy‑relaxation processes in the green fagellate Euglena gracilis.  Photosynth. Res. Euglena gracilis NIES-48
Nakanishi, A., Iritani, K., Sakihama, Y., Watanabe, M., Mochiduki, A., Tsuruta, A., Sakamoto, S., Ota, A.  2021  Fabrication and biodegradability of starch cell-plastics as recyclable resources.  Appl. Sci.-Basel, 11, 847 (article ID). Chlamydomonas reinhardtii NIES-2235
Noguchi, M., Aizawa, R., Nakazawa, D., Hakumura, Y., Furuhashi, Y., Yang, S., Ninomiya, K.,Takahashi, K., Honda, R.  2021  Application of real treated wastewater to starch production by microalgae: Potential effect of nutrients and microbial contamination.  Biochem. Eng. J., 169, 107973 (article ID). Chlorella vulgaris NIES-2170,
Graesiella emersonii NIES-2151,
Parachlorella kessleri NIES-2159
new Nomaki, H., Rastelli, E., ogawa, N. O., Matsui, Y., Tsuchiya, M., Manea, E., Corinaldesi, C., Hirai, M., Ohkouchi, N., Danovaro, R., Nunoura, T., Amaro, T.  2021  In situ experimental evidences for responses of abyssal benthic biota to shifts in phytodetritus compositions linked to global climate change.  Glob. Change Biol., , Chaetoceros socialis NIES-377,
Synechococcus sp. NIES-986
Oda, Y., Nakamura, H., Tokishita, S., Mano, H., Chang, K.-H., Sakamoto, M.  2021  Phenotypic changes in Daphnia pulex under oxygen deficiency, resource limitation and predation risk.  Ecol. Res. Raphidocelis subcapitata NIES-35
Phan,C.-S., Matsuda, K., Balloo, N., Fujita, K., Wakimoto, T., Okino, T.  2021  Argicyclamides A–C Unveil Enzymatic Basis for Guanidine Bis-prenylation  J. Am. Chem. Soc. Microcystis aeruginosa NIES-88
Rubiyatno, R., Mori, K., Inoue, D., Kim, S., Yu, J., Lee, T., Ike, M., Toyama, T.  2021  Isolation and characterization of Euglena gracilis-associated bacteria, Enterobacter sp. CA3 and Emticicia sp. CN5, capable of promoting the growth and paramylon production of E. gracilis under mixotrophic cultivation.  Microorganisms, 9, 1496 (article ID). Euglena gracilis NIES-48
Russell, S., Jackson, C., Reyes-Prieto, A.  2021  High sequence divergence but limited architectural rearrangements in organelle genomes of Cyanophora (Glaucophyta) species.  J. Eukaryot. Microbiol., 68, e12831 (article ID). Cyanophora paradoxa NIES-763,
Cyanophora sudae NIES-764
new Shen, O., Wang, Q., Miao, H., Shimada, M., Utsumi, M., Lei, Z., Zhang, Z., Nishimura, O., Asada, Y., Fujimoto, N., Takanashi, H., Akiba, M., Shimizu, K.  2021  Temperature affects growth, geosmin/2-methylisoborneol production, and gene expression in two cyanobacterial species.  Environ. Sci. Pollut. Res. Pseudanabaena foetidavar. intermedia NIES-512,
Pseudocarteria mucosa NIES-524
Shibata, A., Takahashi, F., Imamura, N., Kasahara, M.  2021  Characteristics of maltose transport system in the endosymbiont Chlorella variabilis of Paramecium bursaria.  Phycol. Res. Chlorella vulgaris NIES-227
Shimakawa, G., Shoguchi, E., Burlacot, A., Ifuku, K., Che, Y., Kumazawa, M., Tanaka, K., Nakanishi, S.  2021  Coral symbionts evolved a functional polycistronic flavodiiron gene.  Photosynth. Res. Cladocopium sp. NIES-4077
Shimasaki, Y., Mukai, K., Takai, Y., Qiu, X., Oshima, Y.  2021  Recent progress in the study of peroxiredoxin in the harmful algal bloom species Chattonella marina.  Antioxidants, 10, 162 (article ID). Chattonella marina var. marina NIES-1, NIES-3
Shoguchi, E., Beedessee, G., Hisata, K., Tada, I., Narisoko, H., Satoh, N., Kawachi, M., Shinzato, C.  2021  A new dinoflagellate genome illuminates a conserved gene cluster involved in sunscreen biosynthesis.  Genome Biol. Evol., 13, evaa235 (article ID). Durusdinium trenchii NIES-2907
Senavirathna, M. D. H. J., Muhetaer, G., Atapaththu, K. S. S., Fujino, T.  2021  Egeria densa allelopathy on Microcystis aeruginosa under different light intensities and preliminary insight into inter-parameter relationships.  Water Air Soil Pollut., 232, 135 (article ID). Microcystis aeruginosa NIES-111
Su, D., Yang, L., Shi, X., Ma, X., Zhou, X., Hedges, S. B., Zhong, B.  2021  Large-scale phylogenomic analyses reveal the monophyly of bryophytes and Neoproterozoic origin of land plants.  Mol. Biol. Evol. Lamprothamnium succinctum NIES-1606,
Nitella flexilis NIES-1611,
Nitellopsis obtusa NIES-1638
Sugawara, K., Fujibayashi, M., Okano, K., Enda, Y., Ichinoseki, S., Taniguchi, Y., Miyata, N.  2021  Assimilation of cyanobacteria by the freshwater bivalve Nodularia douglasiae: Insights from long-term laboratory and field feeding experiments.  J. Water Environ. Technol., 19, 74-84. Microcystis aeruginosa NIES-44
new Suzuki, S., Kawachi, M., Tsukakoshi, C., Nakamura, A., Hagino, K., Inouye, I., Ishida, K.  2021  Unstable relationship between Braarudosphaera bigelowii (= Chrysochromulina parkeae) and its nitrogen-fixing endosymbiont.  Front. Plant Sci., 12, 749895 (article ID). Braarudosphaera bigelowii NIES-3865, NIES-4442
new Tan, X., Zhu, J., Wakisaka, M.  2021  Efect of phytochemical vanillic acid on the growth and lipid accumulation of freshwater microalga Euglena gracilis.  World J. Microbiol. Biotechnol., 37, 217 (article ID). Euglena gracilis NIES-48
new Tanno, A., Tokutsu, R., Arakaki, Y., Ueki, N., Minagawa, J., Yoshimura, K., Hisabori, T., Nozaki, H., Wakabayashi, K.  2021  The four-celled Volvocales green alga Tetrabaena socialis exhibits weak photobehavior and high-photoprotection ability.  PLoS One, 16, e0259138 (article ID). Tetrabaena socialis NIES-571
Tokunaga, S., Morimoto, D., Koyama, T., Kubo, Y., Shiroi, M., Ohara, K., Tokuhiro, H., Mori, Y., Nakagawa, S., Sawayama, S.  2021  Enhanced lutein production in Chlamydomonas reinhardtii by overexpression of the lycopene epsilon cyclase gene.  Appl. Biochem. Biotechnol. Chlamydomonas reinhardtii NIES-2237
Tomaru, Y., Yamaguchi, H., Miki, T.  2021  Growth rate-dependent cell death of diatoms due to viral infection and their subsequent coexistence in a semi-continuous culture system.  Microbes Environ., 36 Chaetoceros tenuissimus NIES-3715
Takahashi, K., Kawai-Toyooka, H., Ootsuki, R., Hamaji, T., Tsuchikane, Y., Sekimoto, H., Higashiyama, T., Nozaki, H.  2021  Three sex phenotypes in a haploid algal species give insights into the evolutionary transition to a self-compatible mating system.  Evolution Colemanosphaera angeleri NIES-3382,
Colemanosphaera charkowiensis NIES-3383,
Eudorina elegans NIES-456
Toyoshima, H., Miyata, A., Yoshida, R., Ishige, T., Takaichi, S., Kawasaki, S.  2021  Distribution of the water-soluble astaxanthin binding carotenoprotein (AstaP) in Scenedesmaceae.  Mar. Drugs, 19, 349 (article ID). Chlamydomonas reinhardtii NIES-2238,
Chlorella variabilis NIES-2540
Tsuchiya, M., Nomaki, H.  2021  Rapid response of the giant protist xenophyophores (Foraminifera, Rhizaria) to organic matter supply at abyssal depths revealed by an in situ dual stable isotope labeling experiment.  Deep-Sea Research, 176, 103608 (article ID). Pseudo-nitzschia sp. NIES-1383
Tuji, A., Yamaguchi, H., Kataoka, T., Sato, M., Sano, T., Niiyama, Y.  2021  Annamia dubia sp. nov. with a description of a new family, Geminocystaceae fam. nov. (Cyanobacteria).  Fottea, 21, 100-109. Annamia dubia NIES-4383
van Zee, M., de Rutte, J., Rumyan, R., Williamson, C., Burnes, T., Radakovits, R., Eugenio, A. S., Badih, S., Lee, D.-H., Archang, M., Di Carlo D.  2021  High-throughput selection of microalgae based on biomass accumulation rates in production environments using PicoShell Particles.  bioRXiv Euglena gracilis NIES-48
Wan, J.-K., Chu, W.-L., Kok, Y.-Y., Lee, C.-S.  2021  Influence of polystyrene microplastic and nanoplastic on copper toxicity in two freshwater microalgae.  Environ. Sci. Pollut. Res. Raphidocelis subcapitata NIES-35
Xu, M., Harmon, J., Yuan, D., Yan, S., Lei, C., Hiramatsu, K., Zhou, Y., Loo, M. H., Hasunuma, T., Isozaki, A., Goda, K.  2021  Morphological indicator for directed evolution of Euglena gracilis with a high heavy metal removal efficiency.  Environ. Sci. Technol., 55, 7880-7889. Euglena gracilis NIES-48
Xu, S., Liu, Y., Zhang, J., Gao, B.  2021  Proteomic mechanisms for the combined stimulatory effects of glyphosate and antibiotic contaminants on Microcystis aeruginosa.  Chemosphere, 267 Microcystis aeruginosa NIES-843
Yamamoto, K., Hamaji, T., Kawai-Toyooka, H., Matsuzaki, R., Takahashi, F., Nishimura, Y., Kawachi, M., Noguchi, H., Minakuchi, YY., Umen, J. G., Toyoda, A., Nozaki, H.  2021  Three genomes in the algal genus Volvox reveal the fate of a haploid sex-determining region after a transition to homothallism.  Proc. Natl. Acad. Sci. U. S. A., 118, e2100712118 (article ID). Volvox africanus NIES-3780, NIES-3784,
V. reticuliferus NIES-3781, NIES-3782, NIES-3783,NIES-3785, NIES-3786
new Yamano, T., Toyokawa, C., Shimamura, D., Matsuoka, T., Fukuzawa, H.  2021  CO2-dependent migration and relocation of LCIB, a pyrenoid-peripheral protein in Chlamydomonas reinhardtii.  Plant Physiol., kiab528 (article ID). Chlamydomonas reinhardtii NIES-2235
new Yamashita, S., Yamamoto, K., Matsuzaki, R., Shigekatsu, S., Yamaguchi, H., Hirooka, S., Minakuchi, Y., Miyagishima, S., Masanobu, M., Atsushi, T., Hisayoshi, N.  2021  Genome sequencing of the multicellular alga Astrephomene provides insights into convergent evolution of germ-soma differentiation.  Sci Rep, 11, 22231 (article ID). Astrephomene gubernaculifera  NIES-4017
new Yonamine, Y., Asai, T., Suzuki, Y., Ito, T., Ozeki, Y., Hoshino, Y.  2021  Probing the biogenesis of polysaccharide granules in algal cells at sub-organellar resolution via raman microscopy with stable isotope labeling.  Anal. Chem. Euglena gracilis NIES-48
new Yu, B. S., Sung, Y. J., Choi, H. I., Sirohi, R., Sim, S. J.  2021  Concurrent enhancement of CO2 fixation and productivities of omega-3 fatty acids and astaxanthin in Haematococcus pluvialis culture via calcium-mediated homeoviscous adaptation and biomineralization.  Bioresour. Technol., 340, 125720 (article ID). Haematococcus lacustris NIES-144
Yruela, I., Moreno-Yruela, C., Olsen, C. A>  2021  Zn2+-dependent histone deacetylases in plants: Structure and evolution.  Trends Plant Sci. Microcystis aeruginosa NIES-843,
Pelatocladus sp. NIES-4106
Zhang, X., Ohtsuki, H., Makino, W., Kato, Y., Watanabe, H., Urabe, J.  2021  Variations in effects of ectosymbiotic microbes on the growth rates among different species and genotypes of Daphnia fed different algal diets.  Ecol. Res. Cyclotella meneghiniana NIES-2364
Zhu, J., Tan, X., Hafid, H. S., Wakisaka, M.  2021  Enhancement of biomass yield and lipid accumulation of freshwater microalga Euglena gracilis by phenolic compounds from basic structures of lignin.  Bioresour. Technol., 321, 124441 (article ID). Euglena gracilis NIES-48