| Amphidinium operculatum | NIES-4606, NIES-4607, NIES-4608 |
| Amphidinium uduigamense | NIES-4605 |
| Coolia canariensis | NIES-4602, NIES-4603, NIES-4604 |
| Coolia malayensis | NIES-4595, NIES-4596, NIES-4597, NIES-4598, NIES-4599, NIES-4600 |
| Coolia palmyrensis | NIES-4601 |
| Amphidinium massartii | NIES-4545 |
| Dolichospermum circinale | NIES-3153 |
| Dolichospermum flos-aquae | NIES-3154 |
| Dolichospermum ucrainicum | NIES-832 |
| Hemistasia phaeocystidicola | NIES-3356 |
| Medakamo hakoo | NIES-4000 |
| Planktothricoides raciborskii | NIES-926, NIES-927 |
| Podomonas kaiyoae | NIES-4540 |
| Raphidiopsis raciborskii | NIES-3085, NIES-3086, NIES-3087, NIES-3088, NIES-3089, NIES-3091, NIES-3092, NIES-3093, NIES-3094, NIES-3095, NIES-3096, NIES-3097, NIES-3098, NIES-3099, NIES-3100, NIES-3101, NIES-3102, NIES-3103 |
| Isochrysis sp. | NIES-4331, NIES-4332, NIES-4333, NIES-4334, NIES-4335 |
| Phormidium sp. | NIES-4263 |
| Synechococcus sp. | NIES-3083, NIES-3084 |
| Emiliania huxleyi | NIES-3363, NIES-3364, NIES-3365 |
| Gambierdiscus jejuensis | NIES-4120 |
| Prorocentrum caipirignum | NIES-4554 |
| Prorocentrum lima | NIES-4555, NIES-4557, NIES-4558 |
| Closterium peracerosum-strigosum-littorale complex | NIES-4321, NIES-4322 |
| Pandorina morum | NIES-4469, NIES-4470 |
| Planktothrix agardhii | NIES-910 |
| Planktothrix mougeotii | NIES-844, NIES-911, NIES-912, NIES-913 |
| Planktothrix pseudagardhii | NIES-845, NIES-915, NIES-916 |
| Planktothrix raciborskii | NIES-918, NIES-920, NIES-921, NIES-925 |
| Raphidiopsis sp. | NIES-3080 |
| Volvulina steinii | NIES-4471 |
| Gonium pectorale | NIES-4499, NIES-4500, NIES-4501, NIES-4502 |
| Parietochloris toyamaensis | NIES-3574 |
| Volvox ferrisii | NIES-4535 |
| Karenia selliformis | NIES-4541, NIES-4542, NIES-4543, NIES-4544 |
| Galdieria sulphuraria | NIES-3638 |
| Microcystis aeruginosa | NIES-3105, NIES-3106, NIES-3107, NIES-3109, NIES-3110, NIES-3111 |
| Nitzschia putrida | NIES-4239 |
| Planktothricoides raciborskii | NIES-3114 |