Strain Data
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| Strain number | NIES-324 | |||
|---|---|---|---|---|
| Phylum | Heterokontophyta | Class | Bacillariophyceae | |
| Scientific name | Skeletonema marinoi-dohrnii complex | |||
| Synonym | ||||
| Former name | Skeletonema costatum (Greville) Cleve | |||
| Common name | Diatom (Centrales) | |||
| Locality (Date of collection) | Osaka Bay Off Kobe Hyogo Japan (1985-07-02) | |||
| Habitat (Isolation source) | Marine (Seawater) | |||
| History | < Osaka Pref. Fish. Exp. St. | |||
| Isolator (Date of isolation) | Yamochi, Susumu (1985-07-10) | |||
| Identified by | Yamochi, Susumu | |||
| State of strain | Unialgal; Clonal; Axenic[2013 Jan] | |||
|
Preservation state (State of preservation) |
Subculture | |||
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Culture condition ( Preculture condition ) |
Medium:
f/2
Temperature: 10 C Light intensity: 6-12 µmol photons/m2/sec L/D cycle: 12L:12D Duration: 1 M |
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| Gene information | 18S rRNA ( AB488611 ) | |||
| Cell size (min - max) | - 4 μm | Organization | ||
| Characteristics | Red tide DNA sequencing indicates this strain is included in Skeletonema marinoi/dohrnii clade | |||
| Other strain no. | Other strain no. : Sk-85su | |||
| Remarks | ||||
| Reference | ||
|---|---|---|
|
510)
Kooistra, W. H. C. F., Sarno, D., Balzano, S., Gu, H., Andersen, R. A., Zingone, A.
2008
Global diversity and biogeography of Skeletonema species (Bacillariophyta).
Protist,
159,
177-193.
, Keywords: biogeography; cryptic species; distribution; LSU rDNA; phytoplankton; Skeletonema costatum
, Strain(s):
16,
17,
223,
323,
324
651) Mochida, K., Onduka, T., Amano, H., Ito, M., Tanaka, H., Fujii, K. 2012 Use of species sensitivity distributions to predict no-effect concentrations of an antifouling biocide, pyridine triphenylborane, for marine organisms. Mar. Pollut. Bull., 64, 2807-2814. , Keywords: Algal growth inhibition test; Bayesian inference; Crustacean immobilization test; Fish acute toxicity; Primary risk analysis , Strain(s): 324 693) Nagasoe, S., Toda, S., Shimasaki, Y., Osima, Y., Uchida, T., Honjo, T. 2006 Growth inhibition of Gyrodinium instriatum (Dinophyceae) by Skeletonema costatum (Bacillariophyceae). Afr. J. Mar. Sci., 28, 325-329. , Keywords: allelopathy; Gyrodinium instriatum; Skeletonema costatum; species interaction , Strain(s): 324 857) Oh, S. J., Kim, D.-I., Sajima, T., Shimasaki, Y., Matsuyama, Y., Oshima, Y., Honjo, T., Yang, H.-S. 2008 Effects of irradiance of various wavelengths from light-emitting diodes on the growth of the harmful dinoflagellate Heterocapsa circularisquama and the diatom Skeletonema costatum. Fish. Sci., 74, 137-145. , Keywords: Heterocapsa circularisquama; irradiance; light wavelengths; light-emitting diode; Skeletonema costatum , Strain(s): 324 903) Okamura, K. 1992 Growth characteristics of Skeletonema costatum for algal growth potential. Kanagawa-ken Kankyô Kagaku Sentâ Kenkyû Hôkoku, 15, 12-15 (in Japanese with English title). , Strain(s): 324 910) Okumura, Y., Koyama, J., Takaku, H., Satoh, H. 2001 Influence of organic solvents on the growth of marine microalgae. Arch. Environ, Contam. Toxicol. 41, 123-128. , Strain(s): 6, 324 915) Onduka, T., Kakuno, A., Kono, K., Ito, K., Mochida, K., Fujii, K. 2012 Toxicity of chlorothalonil to marine organisms. Fish Sci., 78, 1301-1308. , Keywords: Antifouling biocides; Toxicity; Early-life-stage Toxicity test; Predicted no-effect concentration , Strain(s): 324 916) Onduka, T., Mochida, K., Harino, H., Ito, K., Kakuno, A., Fujii, K. 2010 Toxicity of metal pyrithione photodegradation products to marine organisms with indirect evidence for their presence in seawater. Arch. Environ. Contam. Toxicol., 58, 991-997. , Strain(s): 324 917) Onduka, T., Ojima, D., Kakuno, A., Mochida, K., Ito, K., Koyama, J., Fujii, K. 2012 Nitrated polycyclic aromatic hydrocarbons in the marine environment: acute toxicities for organisms at three trophic levels. Jpn. J. Environ. Toxicol., 15, 1-10. , Keywords: alga; crustacean, fish, nitro-PAHs; predicted no effect concentrations , Strain(s): 324 967) Qiu, XC., Yamasaki, Y., Shimasaki, Y., Gunjikake, H., Honda, M., Kawagushi, M., Matsubara, T., Nagasoe, S., Etoh, T., Matsui, S., Honjo, T., Oshima, Y. 2012 Allelopathy of the raphidophyte Heterosigma akashiwo against the dinoflagellate Akashiwo sanguinea is mediated via allelochemicals and cell contact. Mar. Ecol. Prog. Ser., 446, 107-118. , Keywords: Heterosigma akashiwo; Akashiwo sanguinea; Allelopathy; Polysaccharide−protein complex; Cell contact; Growth interaction; Growth simulation , Strain(s): 10, 324 1393) Yamasaki, Y., Nagasoe, S., Tameishi, M., Shikata, T., Zou, Y., Jiang, Z., Matsubara, T., Shimasaki, Y., Yamaguchi, K., Oshima, Y., Honjo, T. 2010 The role of interactions between Prorocentrum minimum and Heterosigma akashiwo in bloom formation. Hydrobiologia, 641, 33-44. , Keywords: Allelopathy; growth and interaction; Heterosigma akashiwo; Prorocentrum minimum; Reactive oxygen species; Skeletonema costatum , Strain(s): 1, 10, 324 1394) Yamasaki, Y., Ohmichi, Y., Hirose, M., Shikata, T., Shimasaki, Y., Oshima, Y., Honjo, T. 2012 Low molecular weight allelochemicals produced by the diatom, Skeletonema costatum. Thalassas, 28, 9-17. , Keywords: Allelochemicals; Diatom; Growth inhibition; Heterosigma akashiwo; Raphidophyt; Skeletonema costatum , Strain(s): 10, 324 1395) Yamasaki, Y., Ohmichi, Y., Shikata, T., Hirose, M., Shimasaki, Y., Oshima, Y., Honjo, T. 2010 Species-specific allelopathic effects of the diatom Skeletonema costatum. Thalassas, 27, 21-32. , Keywords: Allelopathy; growth inhibition; growth promotion; Heterosigma akashiwo; low molecular weight allelochemicals; Skeletonema costatum; species-specific effect , Strain(s): 10, 324 1396) Yamasaki, Y., Shikata, T., Nukata, A., Ichiki, S., Nagasoe, S., Matsubara, T., Shimasaki, Y., Nakao, M., Yamaguchi, K., Oshima, Y., Oda, T., Ito, M., Jenkinson, I. R., Asakawa, M., Honjo, T. 2009 Extracellular polysaccharide-protein complexes of a harmful alga mediate the allelopathic control it exerts within the phytoplankton community. ISME Journal, 3, 808-817. , Keywords: allelopathy; growth inhibition; growth stimulation; harmful algal blooms (HABs); Heterosigma akashiwo; Skeletonema costatum , Strain(s): 10, 324 1445) 奥村真子, 長谷川浩, 水本英伸, 牧輝弥, 上田一正 (Okumura et al.) 2004 キレート配位子存在下での海洋植物プランクトン培養液中の鉄化合物のサイズ分画 (Size fractionation of iron compounds in phytoplankton cultures in the presence of chelating ligands.) 分析化学 (Bunseki Kagaku), 53, 1215-1221 (in Japanese with English summary). , Keywords: iron; speciation; chelating ligands; phytoplankton growth , Strain(s): 324 1448) 山口晴生, 西島敏隆, 西谷博和, 深見公雄, 足立真佐雄 (Yamaguchi et al.) 2004 赤潮プランクトン3種の有機態リン利用特性とアルカリフォスファターゼ産生能 (Organic phosphorus utilization and alkaline phosphatase production of 3 red tide photoplankton.) 日本水産学会誌 (Nippon Suisan Gakkaishi), 70, 123-130 (in Japanese with English summary). , Keywords: Karenia mikimotoi; Skeletonema costatum; Heterosigma akashiwo; 赤潮プランクトン; 有機態リン; アルカリフォスファターゼ , Strain(s): 5, 324 1451) 松原賢, 長副聡, 山崎康裕, 紫加田知幸, 島崎洋平, 大嶋雄治, 本城凡夫 (Matsubara et al.) 2008 渦鞭毛藻Akashiwo sanguineaに対する中心目珪藻類による増殖抑制作用 (Inhibitory effects of centric diatoms on the growth of the dinoflagellate Akashiwo sanguinea.) 日本水産学会誌 (Nippon Suisan Gakkaishi), 74, 598-606 (in Japanese with English summary). , Keywords: Akashiwo sanguinea; アレロパシー; 増殖抑制; 中心目珪藻類 , Strain(s): 324 1452) 深尾剛志, 西島敏隆, 山口晴生, 足立真佐雄 (Fukao et al.) 2007 赤潮プランクトン6種の尿素利用能 (Utilization of urea by the 6 species of red tide phytoplankton.) 日本プランクトン学会報 (Bull. Plankton Soc. Japan), 54, 1-8 (in Japanese with English summary). , Keywords: growth; red tide; phytoplankton; urea; uptake kinetics , Strain(s): 1, 6, 237, 323, 324, 605 |
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