The Microbial Culture Collection at the National Institute for Environmental Studies

Strain Data


Strain number NIES-3713  
Phylum Heterokontophyta   Class Bacillariophyceae 
Scientific name Chaetoceros socialis H.S.Lauder f. radians (F.Schütt) A.I.Proshkina-Lavrenko  
Synonym  
Former name  
Common name Diatom (Centrales)  
Locality (Date of collection) Itsukaichi Fishing Port in Hiroshima Bay Hiroshima Japan (2005-04-27)  
Habitat (Isolation source) Marine (Seawater)  
History < Kimura, Kei < Tomaru, Yuji  
Isolator (Date of isolation) Tomaru, Yuji (2005-04-27)  
Identified by Suzuki, Hidekazu; Nagumo, Tamotsu  
State of strain Unialgal; Clonal; Axenic  
Preservation state
(State of preservation)
Subculture  
Culture condition
( Preculture condition )
Medium:  mSWM-3  
Temperature: 15 C
Light intensity: 9-11 µmol photons/m2/sec     L/D cycle: 10L:14D
Duration: 1 M  
Gene information
Cell size (min - max)   Organization  
Characteristics Red tide The virus which infects with this diatom strain has been reported (Tomaru, Y. et al. 2009).  
Other strain no. Other strain no. : L-4  
Remarks  

Reference
1640)   Tomaru, Y., Shirai, Y., Suzuki, H., Nagumo, T., Nagasaki, K. 2008 Isolation and characterization of a new single-stranded DNA virus infecting the cosmopolitan marine diatom Chaetoceros debilis. Aquat. Microb. Ecol., 50, 103-112. , Keywords: Diatom; Virus; Chaetoceros; DNA; Viral ecology , Strain(s): 37103713 

1643)   Tomaru, Y., Takao, Y., Suzuki, H., Nagumo, T., Nagasaki, K. 2009 Isolation and characterization of a single-stranded RNA virus infecting the bloom-forming diatom Chaetoceros socialis. Appl. Environ. Microbiol., 75, 2375-2391. , Strain(s): 3713 

1645)   Tomaru, Y., Toyoda, K., Suzuki, H., Nagumo, T., Kimura, K., Takao, Y. 2013 New single-stranded DNA virus with a unique genomic structure that infects marine diatom Chaetoceros setoensis. Sci Rep, 3, 3337 (article ID). , Strain(s): 3710371137123713