| Strain number | NIES-2118 | |||
|---|---|---|---|---|
| Phylum | Cyanophyta | |||
| Class | Cyanophyceae | |||
| Scientific name | Leptolyngbya sp. | |||
| Synonym | ||||
| Former name | Oscillatoria sp. | |||
| Common name | Blue-green alga ; Cyanobacteria | |||
| Locality (Date of collection) | ||||
| Latitude / Longitude | ||||
| Habitat (Isolation source) | ||||
| History | < IAM (2007) < Safferman, R. S. | |||
| Isolator (Date of isolation) | ||||
| Identified by | Re-identified at NIES by DNA analysis | |||
| State of strain | Cryopreservation; Unialgal; Clonal; Axenic[2013 Jan.] | |||
|
Culture condition (Preculture condition) |
Medium:
MDM (agar)
Temperature: 20 C Light intensity: 13-18 µmol photons/m2/sec, L/D cycle: 10L:14D Duration: 3 M |
|||
| Gene information | 16S rRNA ( AB003163 ) , gyrB ( AB074775 ) , groEL ( AB039642 ) , rpoC1 ( AB074798 ) , rpoD1 ( AB074825 ) | |||
| Cell size (min - max) | ||||
| Organization | ||||
| Characteristics | ||||
| Other strain no. |
Other collection strain no. : IAM M-117
Other strain no. : CU 1407/1 |
|||
| Remarks | Cryopreserved; Axenic | |||
| Movie | ||||
| Reference |
|---|
|
Ishida, T., Watanabe, M. M., Sugiyama, J., Yokota, A.
2001
Evidence for polyphyletic origin of the members of the orders of Oscillatoriales and Pleurocapsales as determined by 16S rDNA analysis.
FEMS Microbiol. Lett.,
201,
79-82.
Keywords: cyanobacterium; Pleurocapsales; 16S rDNA; phylogeny Strain(s): 27, 208, 510, 2116, 2118, 2119, 2128 PubMed: 11445171 DOI: 10.1111/j.1574-6968.2001.tb10736.x Honda, D., Yokota, A., Sugiyama, J. 1999 Detection of seven major evolutionary lineages in cyanobacteria based on the 16S rRNA gene sequence analysis with new sequences of five marine Synechococcus strains. J. Mol. Evol., 48, 723-739. Keywords: cyanobacteria; Synechococcus; phylogeny; ribosomal RNA; maximum-likelihood method; neighbor-joining method; rate homo- and heterogeneous models Strain(s): 27, 208, 510, 2116, 2118, 2119 PubMed: 10229577 DOI: 10.1007/PL00006517 Ishida, T., Yokota, A., Sugiyama, J. 1997 Phylogenetic relationships of filamentous cyanobacterial taxa inferred from 16S rRNA sequence divergence. J. Gen. Appl. Microbiol., 43, 237-241. Keywords: filamentous cyanobacteria; molecular phylogeny; Oscillatoriales; 16S rRNA Strain(s): 27, 208, 510, 2116, 2118, 2119, 2128 PubMed: 12501325 DOI: 10.2323/jgam.43.237 |
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