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Strain number NIES-716  
Phylum Heterokontophyta  
Class Raphidophyceae  
Scientific name Haramonas dimorpha Horiguchi  
Synonym  
Former name  
Common name  
Locality (Date of collection) Daintree River, Australia (1991-09-21)  
Latitude / Longitude  
Habitat (Isolation source) Brackish water (Sediment)  
History < Horiguchi, Takeo  
Isolator (Date of isolation) Horiguchi, Takeo (1991-10-25)  
Identified by Horiguchi, Takeo  
State of strain Subculture; Unialgal; Clonal; Non-axenic  
Culture condition
(Preculture condition)
Medium:  f/2ESM  
Temperature:  20 C
Light intensity:  10-17 µmol photons/m2/sec, L/D cycle:  10L:14D
Duration:  2 M  
Gene information 18S rRNA ( AB365025 ) , ITS1-5.8S-ITS2 ( AB334370 ) , CO1 ( AB334516 AB445450 ) , GapC1 ( AB459523 ) , GapC2 ( AB459524 ) , petD ( AB280618 ) , psaA ( AB367952 ) , psbB ( AB280591 ) , psbC ( AB280597 ) , psbD ( AB280602 ) , rbcL ( AB280608 AB334443 ) , tufA ( AB367953 )  
Cell size (min - max)  
Organization Unicellular; Flagellate 
Characteristics Autotrophic ; Planktonic ; Benthic ; Authentic strain  
Other strain no.  
Remarks Fragile species to transportation stresses; Read and agree "How to order 4.1" 
Movie  
Reference
Mitani, E., Nakayama, F., Matsuwaki, I., Ichi, I., Kawabata, A., Kawachi, M., Kato, M. 2017 Fatty acid composition profiles of 235 strains of three microalgal divisions within the NIES Microbial Culture Collection. Microb. Resour. Syst., 33, 19-29.
Keywords: Cryptophyta; docosahexaenoic acid; eicosapentaenoic acid; fatty acid; Haptophyta; Heterokontophyta; microalgae
Strain(s): 1891415177111514522322523323426527427527627727827928028128228429332332433033334434534634734835035337237738839139540740840941341441746146246648753454855355655755855956056258758858959060360562162262369569669769869970070170270370470570670770870971071171271371471571674176576676780583799710011002100310041005100610071009101110161017104410451046104713021303132413271330133913401349135313701375137613791383138413851386138713911392139313951398139914001401169917001730181318151816182618271831186218631864186518741963196419652142214321442145214721482300233123322351236323642365237025062533253425352536253725902633266826892690269126932694269626972716271727182720272227232725272627292730273127322770277127722773283928402841284228432844285928782890 

Yang, EC., Boo, GH., Kim, HJ., Cho, SM., Boo, SM., Andersen, R. A., Yoon, HS. 2012 Supermatrix data highlight the phylogenetic relationships of photosynthetic Stramenopiles. Protist, 163, 217-231.
Keywords: Heterokont algae; molecular phylogenetic analysis; multigene phylogeny; reduced flagellar clade; stramenochromes
Strain(s): 29362271618631864 
PubMed: 22001261
DOI: 10.1016/j.protis.2011.08.001

Kamikawa, R., Masuda, I., Demura, M., et al. 2009 Mitochondrial group II introns in the Raphidophycean flagellate Chattonella spp. suggest a diatom-to-Chattonella lateral group II intron transfer. Protist, 160, 364-375.
Keywords: Chattonella; cytochrome c oxidase subunit 1 (cox1); diatoms; group II intron; lateral transfer; Raphidophyceae
Strain(s): 123148586115118121145161462557558603671716849130323912401240224032404 
DOI: 10.1016/j.protis.2009.02.003

Takishita, K., Yamaguchi, H., Maruyama, T., Inagaki, Y. 2009 A hypothesis for the evolution of nuclear-encoded, plastid-targeted glyceraldehyde-3 phosphate dehydrogenase genes in "chromalveolate" members. PLoS One, 4, e4737 (article ID).
Strain(s): 15275706716 
PubMed: 19270733
DOI: 10.1371/journal.pone.0004737

Demura, M., Noël, M.-H., Kasai, F., Watanabe, M. M., Kawachi, M. 2009 Taxonomic revision of Chattonella antiqua, C. marina and C. ovata (Raphidophyceae) based on their morphological characteristics and genetic diversity. Phycologia, 48, 518-535.
Keywords: Chattonella antiqua; Chattonella marina; Chattonella ovata; COI; COX1; Genetic diversity; ITS; Microsatellite; Morphology; Phylogeny; Population; Raphidophyceae; rbcL; Speciation; Taxonomy
Strain(s): 1235691014838485113114116118145146161293557561603671716849238323842385238623872388238923912392239323942395239623972398239924002401240224032404240524062407 
DOI: 10.2216/08-98.1

Yamaguchi, H., Hoppenrath, M., Takishita, K., Horiguchi, T. 2008 Haramonas pauciplastida sp. nov. (Raphidophyceae, Heterokontophyta) and phylogenetic analyses of Haramonas species using small subunit ribosomal RNA gene sequences. Phycol. Res., 56, 127-138.
Keywords: Haramonas pauciplastida sp. nov.; phylogeny; Raphidophyceae; small subunit rDNA; taxonomy; ultrastructure
Strain(s): 7161870 
DOI: 10.1111/j.1440-1835.2008.00493.x

Iida, K., Takishita, K., Ohshima, K., Inagaki, Y. 2007 Assessing the monophyly of chlorophyll-c containing plastids by multi-gene phylogenies under the unlinked model conditions. Mol. Phylogenet. Evol., 45(1), 227-238.
Keywords: chromist; chromalveolate; secondary endosymbiosis; model misspecification; separate model; concatenate model
Strain(s): 115548670716 

Horiguchi, T. 1996 Haramonas dimorpha gen. et sp. nov. (Raphidophyceae), a new marine raphidophyte from Australian mangrove. Phycol. Res., 44, 143-150.
Keywords: Haramonas dimorpha gen et sp. nov.; mangrove; Raphidophyceae; taxonomy; tubular invagination; ultrastructure
Strain(s): 716 

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