Strain Data

Strain number		NIES-3669
Phylum		Chlorophyta
Class		Chloropicophyceae
Scientific name		Chloroparvula pacifica Lopes dos Santos, Noël & Eikrem
Synonym
Former name
Common name
Locality (Date of collection)		Pacific Ocean (Oyashio region) Japan (2012-10-03)
Latitude / Longitude		42.1634 / 145.0674
Habitat (Isolation source)		Marine (Seawater)
History		< Noël, Mary-Hélène
Isolator (Date of isolation)		Noël, Mary-Hélène (2013-02-08)
Identified by		Identified by DNA analysis at NIES
State of strain		Subculture; Unialgal; Clonal; Axenic[2020 Dec]
Culture condition (Preculture condition)		Medium: ESM Temperature: 20 C Light intensity: 22-24 µmol photons/m²/sec, L/D cycle: 10L:14D Duration: 25 D
Gene information		Mitochondrial DNA ( MK086011 ) , Plastid DNA ( MK085995 ) , 16S rRNA ( KU843560 ) , 18S rRNA ( KU843574 ) , ITS1-5.8S-ITS2-28S ( MF077486 )
Cell size (min - max)
Organization		Unicellular
Characteristics		Genome decoded strain (Turmel et al. 2019) ; Authentic strain (Lopes dos Santos et al. 2017) ; Clade VIIB1
Other strain no.		Other collection strain no. : RCC4656 Other strain no. : MH 509
Remarks		Axenic
Movie

Reference
Turmel, M., Lopes Dos Santos, A., Otis, C., Sergerie, R., Lemieux, C. 2019 Tracing the evolution of the plastome and mitogenome in the Chloropicophyceae uncovered convergent tRNA gene losses and a variant plastid genetic code. Genome Biol. Evol., 11, 1275–1292. Keywords: prasinophyte green algae; Picocystis salinarum; chloroplast genome; mitochondrial genome; phylogenomic analyses; AUA codon reassignment Strain(s): 2755, 2758, 3669, 3835, 3849 PubMed: 30937436 DOI: 10.1093/gbe/evz074 Lopes dos Santos, A., Pollina, T., Gourvil, P., Corre, E., Marie, D., Garrido, J. L., Rodríguez, F., Noël, M.-H., Vaulot, D., Eikrem, W. 2017 Chloropicophyceae, a new class of picophytoplanktonic prasinophytes. Sci Rep, 7, 14019 (article ID). Strain(s): 2755, 2756, 2758, 3667, 3668, 3669, 3670, 3671, 3835, 3849 PubMed: 10.3775/jie.96.352 DOI: 10.1038/s41598-017-12412-5 Lopes dos Santos, A., Gourvil, P., Tragin, M., Noël, M.-H., Decelle, J., Romac, S., Vaulot, D. 2016 Diversity and oceanic distribution of prasinophytes clade VII, the dominant group of green algae in oceanic waters. ISME J., 11, 512-528. Strain(s): 2755, 2756, 2758, 3668, 3669, 3670, 3671, 3835, 3849 PubMed: 27779617 DOI: 10.1038/ismej.2016.120

Reference

Turmel, M., Lopes Dos Santos, A., Otis, C., Sergerie, R., Lemieux, C. 2019 Tracing the evolution of the plastome and mitogenome in the Chloropicophyceae uncovered convergent tRNA gene losses and a variant plastid genetic code. Genome Biol. Evol., 11, 1275–1292.
Keywords: prasinophyte green algae; Picocystis salinarum; chloroplast genome; mitochondrial genome; phylogenomic analyses; AUA codon reassignment
Strain(s): 2755, 2758, 3669, 3835, 3849
PubMed: 30937436
DOI: 10.1093/gbe/evz074

Lopes dos Santos, A., Pollina, T., Gourvil, P., Corre, E., Marie, D., Garrido, J. L., Rodríguez, F., Noël, M.-H., Vaulot, D., Eikrem, W. 2017 Chloropicophyceae, a new class of picophytoplanktonic prasinophytes. Sci Rep, 7, 14019 (article ID).
Strain(s): 2755, 2756, 2758, 3667, 3668, 3669, 3670, 3671, 3835, 3849
PubMed: 10.3775/jie.96.352
DOI: 10.1038/s41598-017-12412-5

Lopes dos Santos, A., Gourvil, P., Tragin, M., Noël, M.-H., Decelle, J., Romac, S., Vaulot, D. 2016 Diversity and oceanic distribution of prasinophytes clade VII, the dominant group of green algae in oceanic waters. ISME J., 11, 512-528.
Strain(s): 2755, 2756, 2758, 3668, 3669, 3670, 3671, 3835, 3849
PubMed: 27779617
DOI: 10.1038/ismej.2016.120

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