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Yoshida, T., Takashima, Y., Tomaru Y., Shirai, Y., Takao, Y., Hiroishi, S., Nagasaki, K.
2012
A protein binding to an upstream sequence of ftsZ involved in coordination of DNA replication and cell division in Microcystis aeruginosa.
Fish. Sci.,
78,
375-379.
Keywords: Cyanobacteria; Microcystis; Cell division; DNA replication; ftsZ Strain(s): 298 |
|
Yoshida, T., Takashima, Y., Tomaru Y., Shirai, Y., Takao, Y., Hiroishi, S., Nagasaki, K.
2012
Intricate interactions between the bloom-forming cyanobacterium Microcystis aeruginosa and foreign genetic elements, revealed by diversified clustered regularly interspaced short palindromic repeat (CRISPR) signatures.
Appl. Environ. Microbiol.,
78,
5353-5360.
Strain(s): 87, 102, 298 PubMed: 22636003 DOI: 10.1128/AEM.00626-12 |
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Yabuki, A., Ishida, K-I.
2011
Mataza hastifera n. g., n. sp.: a possible new lineage in the Thecofilosea (Cercozoa).
J. Eucaryot. Microbiol.,
58,
94-102.
Keywords: Cryomonadida; Cryothecomonas; environmental sequence; extrusome; phylogeny; Protaspis; taxonomy; ultrastructure Strain(s): 2568 |
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Yabuki, A., Nakayama, T., Yubuki, N., Hashimoto, T., Ishida, K-I. Inagaki, Y.
2011
Tsukubamonas globosa n. gen., n. sp., a novel excavate flagellate possibly holding a key for the early evolution in "Discoba".
J. Eucaryot. Microbiol.,
58,
319-331.
Keywords: Flagellar apparatus; heteroloboseans; jakobids; multigene phylogeny; taxonomy; ultrastructure Strain(s): 1390 |
|
Yagawa, Y., Aizawa, K., Yang, S.-Y., Miyachi, S.
1986
Release of carbonic anhydrase from the cell surface of Chlamydomonas reinhardtii by trypsin.
Plant Cell Physiol.,
27,
215-221.
Keywords: carbonic anhydrase; cell surface; Chlamydomonas reinhardtii; trypsin treatment Strain(s): 2235 |
|
Yagawa, Y., Muto, S., Miyachi, S.
1987
Carbonic anhydrase of a unicellular red alga Porphyridium cruentum R-1. I. Purification and properties of the enzyme.
Plant Cell Physiol.,
28,
1253-1262.
Keywords: carbonic anhydrase; chloride ion-activation; Porphyridium cruentum Strain(s): 2138 |
|
Yagawa, Y., Muto, S., Miyachi, S.
1987
Carbonic anhydrase of a unicellular red alga Porphyridium cruentum R-1. II. Distribution and role in photosynthesis.
Plant Cell Physiol.,
28,
1509-1516.
Keywords: anti-Porphyridium carbonic anhydrase antibody; carbonic anhydrase; immunogold electron microscopy; intracellular distribution; Porphyridium cruentum Strain(s): 2138 |
|
Yagawa, Y., Muto, S., Miyachi, S.
1988
Carbonic anhydrase of Chlamydomonas reinhardtii. Cellular distribution and subunit constitution in two strains.
Plant Cell Physiol.,
29,
185-188.
Keywords: carbonic anhydrase (cellular distribution); Chlamydomonas Strain(s): 2235 |
|
Yagawa, Y., Shiraiwa, Y., Miyachi, S.
1984
Carbonic anhydrase from the blue-green alga (cyanobacterium) Anabaena variabilis.
Plant Cell Physiol.,
25,
775-783.
Keywords: Anabaena variabilis; blue-green alga; carbonic anhydrase (EC4.2.1.1); cyanobacterium; enzyme purification Strain(s): 2093 |
|
Yagi, O., Hagiwara, T., Takamura, Y., Sudo, R.
1984
Growth characteristics of axenic and unialgal Microcystis isolated from Lake Kasumigaura.
Jpn. J. Water Poll. Res.,
7,
496-503 (in Japanese with English summary).
Keywords: Microcystis; bacteria; growth; axenic; algae Strain(s): 478, 604 |
|
Yagi, O., Hagiwara, T., Takamura, Y., Sudo, R.
1987
Limiting nutrients of algal growth in Lake Kasumigaura.
Jpn. J. Water Poll. Res.,
10,
115-122 (in Japanese with English summary).
Keywords: Microcystis; blue-green algae; nutrients; algal growth potential Strain(s): 35, 478 |
|
Yagi, O., Ohkubo, N., Tomioka, N., Okada, M.
1989
Limiting nutrients of algal growth in Ushiku Marsh.
Jpn. J. Limnol.,
50,
139-148 (in Japanese with English summary).
Keywords: algal growth potential; Microcystis; Selenastrum; nutrient Strain(s): 35, 478 |
|
Yagi, O., Sudo, R., Imaoka, T., Teranishi, S.
1984
Algal growth potential on munisipal wastewater using red tide organisms.
Res. Rep. Natl. Inst. Environ. Stud.,
No. 63,
231-242 (in Japanese with English summary).
Strain(s): 35 |
|
Yagisawa, F., Nishida, K., Yoshida, M., Ohnuma, N., Shimada, T., Fujiwara, T., Yoshida, Y., Misumi, O., Kuroiwa, H., Kuroiwa, T.
2009
Identification of novel proteins in isolated polyphosphate vacuoles in the primitive red alga Cyanidioschyzon merolae.
Plant J.,
60,
882-893.
Keywords: polyphosphate; vacuole; primitive; Cyanidioschyzon; isolation; mass spectrometry (MS) Strain(s): 3377 PubMed: 19709388 DOI: 10.1111/j.1365-313X.2009.04008.x |
|
Yamada, E., Hirota, T., Hatori, N., Kitao, Y., Fuse, Y., Aoki, S., Karatani, H., Matsunaga, T.
2012
Characterization of protein-like fluorophores released from lake phytoplankton on the basis of fractionation and electrophoresis.
Anal. Sci.,
28,
595-600.
Strain(s): 109, 275, 665 |
|
Yamada, E., Ohara, S., Uehara, T., Hirota, T., Hatori, N., Fuse, Y., Aoki, S.
2012
Biodegradation of dissolved organic matter (DOM) released from phytoplankton in Lake Biwa.
Anal. Sci.,
28,
675-681.
Strain(s): 109, 275, 665 |
|
Yamada, K., Moriyama, R., Hatano, S.
1987
Production of osmotically labile cells in Chlorella ellipsoidea C-27 and C-102 by enzyme treatment.
Agric. Biol. Chem.,
51,
579-580.
Strain(s): 2170 |
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Yamada, M., Katsuki, E., Otsubo, M., Kawaguchi, M., Ichimi, K., Keriyama, H., Tada, K., Harrison, P. J.
2010
Species diversity of the genus Skeltonema (Bacillariophyceae) in the Industrial Harbor Dokai Bay, Japan.
J. Oceanogr.,
66,
755-771.
Keywords: Skeletonema; species diversity; isolation characteristics; Dokai Bay; LSU rDNA; SSU rDNA; SEM Strain(s): 2837, 2838, 2839, 2841, 2842, 2843, 2844 |
|
Yamada, N., Aoyama, K., Yamada, M., Hamamura, N.
1985
Studies on earthy-musty odor in natural water (1). Growth characteristics and 2-methylisoborneol production of Phormidium tenue.
Jpn. J. Water Poll. Res.,
8,
515-521 (in Japanese with English summary).
Keywords: blue-green algae; Phormidium tenue; growth characteristics; headspace-GC analysis; 2-methylisoborneol Strain(s): 512 |
|
Yamada, N., Aoyama, K., Yamada, M., Hamamura, N.
1986
Studies on earthy-musty odor in natural water (3). Isolation of bacteria-free Phormidium tenue and the effect of associated bacteria on the growth of axenic P. tenue.
Jpn. J. Water Poll. Res.,
9,
379-385 (in Japanese with English summary).
Keywords: Phormidium tenue; axenic; growth; 2-methylisoborneol; bacteria interaction Strain(s): 512 |
|
Yamada, T. K., Miyaji, K., Nozaki, H.
2008
A taxonomic study of Eudorina unicocca (Volvocaceae, Chlorophyceae) and related species, based on morphology and molecular phylogeny.
Eur. J. Phycol.,
43,
317-326.
Keywords: aplanosporic strain; Eudorina unicocca; Eudorina peripheralis stat. nov.; Chlorophyceae; molecular phylogeny; morphology; taxonomy; Volvocales; Yamagishiella Strain(s): 578, 666, 717, 722, 723, 724, 725, 726, 870, 872, 1858, 1859 |
|
Yamada, T. K., Tsuchikane, Y., Wu, J.-T., Sekimoto, H., Miyaji, K., Nozaki, H.
2008
Morphology and molecular phylogeny of Eudorina sp. (Volvocaceae, Chlorophyceae) from Taiwan.
Hikobia,
15,
135-143.
Keywords: Eudorina elegans; Eudorina minodii; Eudorina unicocca; Eudorina peripheralis; Chlorophyceae; molecular phylogeny; morpholohy; taxsonomy; Volvocales Strain(s): 724, 725, 726, 1858, 2734, 2735 |
|
Yamada, T., Nakada, T., Miyaji, K., Nozaki, H.
2006
Morphology and molecular phylogeny of Gonium multicoccum (Volvocales, Chlorophyceae) newly found in Japan.
J. Jpn. Bot.,
81,
139-147.
Keywords: Chlorophyceae; Gonium multicoccum; ITS2; rbcL; Volvocales Strain(s): 1038, 1707, 1708, 1709, 1711, 1713 |
|
Yamada, T., Sakaguchi, K.
1981
Protoplast induction in Chlorella species.
Agric. Biol. Chem.,
45,
1905-1909.
Strain(s): 685, 2160, 2165, 2170, 2189 |
|
Yamada, T., Sakaguchi, K.
1982
Comparative studies on Chlorella cell walls: Induction of protoplast formation.
Arch. Mikrobiol.,
132,
10-13.
Strain(s): 227, 686, 2159, 2163, 2166, 2168, 2171, 2189, 2352 |
|
Yamagishi, T., Katsumata, M., Yamaguchi, H., Shimura, Y., Kawachi, M., Koshikawa, H., Horie, Y., Tatarazako, N.
2016
Rapid ecotoxicological bioassay using delayed fluorescence in the marine cyanobacterium Cyanobium sp. (NIES-981).
Ecotoxicology,
25,
1751-1758.
Keywords: Algal growth inhibition test; Cyanobium sp.; Delayed fluorescence; Marine cyanobacteria Strain(s): 981 DOI: 10.1007/s10646-016-1718-7 |
|
Yamagishi, T., Kawai, H.
2012
Cytoskeleton organization during the cell cycle in two stramenopile microalgae, Ochromonas danica (Chrysophyceae) and Heterosigma akashiwo (Raphidophyceae), with special reference to F-actin organization and its role in cytokinesis.
Protist,
163,
686-700.
Keywords: Cytokinesis; F-actin; Heterosigma; microtubule; Ochromonas; phalloidin; stramenopiles Strain(s): 6 PubMed: 22104586 DOI: 10.1016/j.protis.2011.09.003 |
|
Yamagishi, T., Kurihara, A., Kawai, H.
2015
A ribbon-like structure in the ejective organelle of the green microalga Pyramimonas parkeae (Prasinophyceae) consists of core histones and polymers containing N-acetyl-glucosamine.
Protist,
166,
522-533.
Keywords: Core histone; ejectisome; N-acetyl-glucosamine; Pyramimonas parkeae Strain(s): 251, 254 PubMed: 26398336 DOI: 10.1016/j.protis.2015.08.003 |
|
Yamaguchi, H., Arisaka, H., Otsuka, N., Tomaru, Y.
2014
Utilization of phosphate diesters by phosphodiesterase-producing marine diatoms.
J. Plankton Res.,
36,
281-285.
Keywords: marine diatoms; phosphate diester; phosphodiesterase; phosphorus Strain(s): 6 DOI: 10.1093/plankt/fbt091 |
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Yamaguchi, H., Hoppenrath, M., Takishita, K., Horiguchi, T.
2008
Haramonas pauciplastida sp. nov. (Raphidophyceae, Heterokontophyta) and phylogenetic analyses of Haramonas species using small subunit ribosomal RNA gene sequences.
Phycol. Res.,
56,
127-138.
Keywords: Haramonas pauciplastida sp. nov.; phylogeny; Raphidophyceae; small subunit rDNA; taxonomy; ultrastructure Strain(s): 716, 1870 DOI: 10.1111/j.1440-1835.2008.00493.x |
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Yamaguchi, H., Nakayama, T., Hongoh, Y., Kawachi, M., Inouye, I.
2014
Molecular diversity of endosymbiotic Nephroselmis (Nephroselmidophyceae) in Hatena arenicola (Katablepharidophycota).
J. Plant Res.,
127,
241-247.
Keywords: 18S rRNA gene; 16S rRNA gene; Symbiosis; Hatena arenicola; Nephroselmiis; Phylogeny Strain(s): 2864, 2865, 2866 DOI: 10.1007/s10265-013-0591-1 |
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Yamaguchi, H., Nakayama, T., Murakami, A., Inouye, I.
2010
Phylogeny and taxonomy of the Raphidophyceae (Heterokontophyta) and Chlorinimonas sublosa gen. et sp. nov., a new marine sand-dwelling raphidophyte.
J. Plant Res.,
123,
333-342.
Keywords: Chlorinimonas sublosa gen. et sp. nov.; Phylogeny; Raphidophyceae; Taxonomy; Ultrastructure Strain(s): 558, 1380, 1808, 1809 PubMed: 19946727 DOI: 10.1007/s10265-009-0281-1 |
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Yamaguchi, H., Shimura, Y., Suzuki, S., Yamagishi, T., Tatarazako, N., Kawachi, M.
2016
Complete genome sequence of Cyanobium sp. NIES-981, a marine strain potentially useful for ecotoxicological bioassays.
GenomeA,
4,
e00736-16 (article ID).
Strain(s): 981 DOI: 10.1128/genomeA.00736-16 |
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Yamaguchi, H., Suda, S., Nakayama, T., Pienaar, RN., Chihara, M., Inouye, I.
2011
Taxonomy of Nephroselmis viridis sp. nov. (Nephroselmidophyceae, Chlorophyta), a sister marine species to freshwater N. olivacea.
J. Plant Res.,
124,
49-62.
Keywords: 18S rDNA; Intron; Nephroselmis viridis; Phylogeny; Prasinophyceae; Ultrastructure Strain(s): 486 PubMed: 20499263 DOI: 10.1007/s10265-010-0349-y |
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Yamaguchi, H., Suzuki, S., Tanabe, Y., Osana, Y., Shimura, Y., Ishida, K-I., Kawachi, M.
2015
Complete genome sequence of Microcystis aeruginosa NIES-2549, a bloom-forming cyanobacterium from lake Kasumigaura, Japan.
GenomeA,
3,
e00551-15 (article ID).
Strain(s): 2549 DOI: 10.1128/genomeA.00551-15 |
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Yamaguchi, H., Tanimoto, Y., Yoshimatsu, T., Sato, S., Nishimura, T., Uehara, K., Adachi, M.
2012
Culture method and growth characteristics of marine benthic dinoflagellate Ostreopsis spp. isolated from Japanese coastal waters.
Fish. Sci.,
78,
993-1000.
Keywords: Culture method; Growth characteristics; Ostreopsis; Palytoxin Strain(s): 3353 |
|
Yamaguchi, K., Murakami, M., Okino, T.
1989
Screening of angiotensin-converting enzyme inhibitory activities in microalgae.
J. Appl. Phycol.,
1,
271-275.
Keywords: angiotensin converting enzyme; inhibitor; microalgae; peptide; screening Strain(s): 14, 100, 102, 104, 114 |
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Yamaguchi, M., Ogawa, T., Muramoto, K., Kamio, Y., Jimbo, M., Kamiya, H.
1999
Isolation and characterization of a mannan-binding lectin from the freshwater cyanobacterium (blue-green algae) Microcystis viridis.
Biochem. Biophys. Res. Commun.,
265,
703-708.
Keywords: Microcystis viridis; lectin; cyanobacterium; mannan-binding lectin; blue-green algae; hemaggulutinin Strain(s): 102 |
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Yamaguchi, T., Kobayashi, Y., Adachi, K., Imamura, N.
2003
Argimicins B and C, new anti-cyanobacterial compounds produced by Sphingomonas sp. M-17.
J. Antibiot.,
56,
655-657.
Strain(s): 45, 81, 102, 230, 298, 592 |
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Yamaki, H., Sitachitta, N., Sano, T., Kaya, K.
2005
Two new chymotrypsin inhibitors isolated from the cyanobacterium Microcystis aeruginosa NIES-88.
J. Nat. Prod.,
68,
14-18.
Strain(s): 88 |
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Yamamoto, H., Hada, K., Yamaji, H., Katsuda, T., Ohno, H., Fukuda, H.
2006
Application of regularized alternating least squares and independent component analysis to HPLC-DAD data of Haematococcus pluvialis metabolites.
Biochem. Eng. J.,
32,
149-156.
Keywords: metabolomics; chemometrics; HPLC-DAD; alternating least squares; regularized term; independent component analysis Strain(s): 144 |
|
Yamamoto, H., Nakamura, Y., Nakamura, Y., Kitani, C., Imari, T., Sekizawa, J., Takao, Y., Yamashita, N., Hirai, N., Oda, S., Takarazako, N.
2007
Initial ecological risk assessment of eight selected human pharmaceuticals in Japan.
Environ. Sci.,
14,
177-193.
Keywords: pharmaceuticals; initial risk assessment; aquatic organisms; predicted no effect concentration Strain(s): 35 |
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Yamamoto, M., Handa, S., Kawachi, M., Miyamura, S., Nagumo, T., Hirata, A., Kawano, S.
2016
Mother cell wall cleavage during filament formation in Stichococcus bacillaris (Trebouxiophyceae, Chlorophyta).
Cytologia,
81,
35-39.
Keywords: Binary fission; Filament formation; Mother cell wall; Stichococcus; Trebouxiophyceae Strain(s): 3639 DOI: 10.1508/cytologia.81.35 |
|
Yamamoto, M., Nozaki, H., Kawano, S.
2001
Evolutionary relationships among multiple modes of cell division in the genus Nannochloris (Chlorophyta) revealed by genome size, actin gene multiplicity, and phylogeny.
J. Phycol.,
37,
106-120.
Keywords: actin gene; autosporulation; binary fission; budding; cell division; Chlorophyta; DNA content; genome size; phylogeny; Nannochloris Strain(s): 2160 DOI: 10.1046/j.1529-8817.2001.037001106.x |
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Yamamoto, M., Nozaki, H., Miyazawa, Y., Koide, T., Kawano, S.
2003
Relationship between presence of a mother cell wall and speciation in the unicellular microalga Nannochloris (Chlorophyta).
J. Phycol.,
39,
172-184.
Keywords: 18S rRNA; actin gene; autosporulation; binary fission; budding; Chlorella; Chlorophyta; molecular phylogeny; TBR, tree bisection reconnection Strain(s): 2160, 2169, 2173, 2186 DOI: 10.1046/j.1529-8817.2003.02052. |
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Yamamoto, Y.
1972
The fatty acid composition of akinetes, heterocysts and vegetative cells in Anabaena cylindrica.
Plant Cell Physiol.,
13,
913-915.
Strain(s): 19 |
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Yamamoto, Y.
1975
Effect of desiccation on the germination of akinetes of Anabaena cylindrica.
Plant Cell Physiol.,
16,
749-752.
Strain(s): 19 |
|
Yamamoto, Y.
1976
Effect of some physical and chemical factors on the germination of akinates of Anabaena cylindrica.
J. Gen. Appl. Microbiol.,
22,
311-323.
Strain(s): 19 |
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Yamamoto, Y.
1978
Detection of algal lysing biological agents in lakes by the soft-agar overlayer technique.
Jpn. J. Limnol,
39,
9-14 (in Japanese with English summary).
Strain(s): 19 |
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Yamamoto, Y.
1981
Observation on the occurrence of microbial agents which cause lysis of blue-green algae in Lake Kasumigaura.
Jpn. J. Limnol.,
42,
20-27.
Strain(s): 19 |
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Yamamoto, Y., Kawashima, D., Hashizume, A., Hisamotsu, M., Isono, N.
2013
Purification and characterization of 1,3-β-D-glucan phosphorylase from Ochromonas danica.
Biosci. Biotechnol. Biochem.,
77,
130411-130416.
Keywords: 1,3-β-D-glucan phosphorylase; Ochromonas danica; laminarin; laminarioligosaccharides; 1,3-β-D-glucan Strain(s): 2142 DOI: 10.1271/bbb.130411 |
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Yamamoto, Y., Shiah, F.-K.
2010
Relationship between cell growth and frequency of dividing cells of Microcystis aeruginosa.
Plankton Benthos Res.,
5,
131-135.
Keywords: frequency of dividing cells; incubation experiment; Microcystis aeruginosa; specific growth rate Strain(s): 1355 |
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Yamamoto, Y., Shiah, FK.
2015
Effect of sonication on live and fixed cells of Microcystis aeruginosa.
Plankton Benthos Res.,
10,
163-166.
Keywords: cell destruction; fixation; Lugol's iodine solution; Microcystis aeruginosa; sonication Strain(s): 1090, 1157 DOI: 10.3800/pbr.10.163 |
|
Yamamoto, Y., Suzuki, K.
1990
Distribution and algal-lysing activity of fruiting myxobacteria in Lake Suwa.
J. Phycol.,
26,
457-462.
Keywords: algal-lysing activity; cyanobacteria; fruiting myxobacteria Strain(s): 19, 40, 44, 99, 102, 112 |
|
Yamane, K., Matsuyama, S., Igarashi, K., Kuwabara, T.
2013
Pyrolytic Generation of Petroleum Crude Oils from the Marine Phytomicroalgal Coccolithophore Emiliania huxleyi (Haptophyta) and Preparation of n-Alkane-Rich Biofuel.
Energy Fuels,
27,
7470–7479.
Strain(s): 837 |
|
Yamane, K., Matsuyama, S., Igarashi, K., Utsumi, M., Shiraiwa, Y., Kuwabara, T.
2013
Anaerobic coculture of microalgae with Thermosipho globiformans and Methanocaldococcus jannaschii at 68 ºC enhances generarion of n-alkane-rich biofules after pyrolysis.
Appl. Environ. Microbiol.,
79,
924-930.
Strain(s): 837, 2258 PubMed: 23183975 DOI: 10.1128/AEM.01685-12 |
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Yamano, T., Iguchi, H. Fukuzawa, H.
2013
Rapid transformation of Chlamydomonas reinhardtii without cell-wall removal.
J. Biosci. Bioeng.,
115,
691-694.
Keywords: Chlamydomonas reinhardtii; Electroporation; Square electric pulse; Transformation Strain(s): 2235 DOI: 10.1016/j.jbiosc.2012.12.020 |
|
Yamano, T., Miura, K., Fukuzawa, H.
2008
Expression analysis of genes associated with the induction of the carbon-concentrating mechanism in Chlamydomonas reinhardtii.
Plant Physiol.,
147,
340-354.
Strain(s): 2235 DOI: 10.1104/pp.107.114652 |
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Yamasaki, Y., Nagasoe, S., Matsubara, T., Shikata, T., Shimasaki, Y., Oshima, Y., Honjo, T.
2007
Allelopathic interactions between the bacillariophyte Skeletonema costatum and the raphidophyte Heterosigma akashiwo.
Mar. Ecol. Prog. Ser.,
339,
83-92.
Keywords: Allelopathy; Bacillariophyceae; Skeletonema costatum; Raphidophyceae; Heterosigma akashiwo; Bi-algal culture; Growth inhibition Strain(s): 10, 324 |
|
Yamasaki, Y., Nagasoe, S., Tameishi, M., Shikata, T., Zou, Y., Jiang, Z., Matsubara, T., Shimasaki, Y., Yamaguchi, K., Oshima, Y., Honjo, T.
2010
The role of interactions between Prorocentrum minimum and Heterosigma akashiwo in bloom formation.
Hydrobiologia,
641,
33-44.
Keywords: Allelopathy; growth and interaction; Heterosigma akashiwo; Prorocentrum minimum; Reactive oxygen species; Skeletonema costatum Strain(s): 1, 10, 324 |
|
Yamasaki, Y., Ohmichi, Y., Hirose, M., Shikata, T., Shimasaki, Y., Oshima, Y., Honjo, T.
2012
Low molecular weight allelochemicals produced by the diatom, Skeletonema costatum.
Thalassas,
28,
9-17.
Keywords: Allelochemicals; Diatom; Growth inhibition; Heterosigma akashiwo; Raphidophyt; Skeletonema costatum Strain(s): 10, 324 |
|
Yamasaki, Y., Ohmichi, Y., Shikata, T., Hirose, M., Shimasaki, Y., Oshima, Y., Honjo, T.
2010
Species-specific allelopathic effects of the diatom Skeletonema costatum.
Thalassas,
27,
21-32.
Keywords: Allelopathy; growth inhibition; growth promotion; Heterosigma akashiwo; low molecular weight allelochemicals; Skeletonema costatum; species-specific effect Strain(s): 10, 324 |
|
Yamasaki, Y., Shikata, T., Nukata, A., Ichiki, S., Nagasoe, S., Matsubara, T., Shimasaki, Y., Nakao, M., Yamaguchi, K., Oshima, Y., Oda, T., Ito, M., Jenkinson, I. R., Asakawa, M., Honjo, T.
2009
Extracellular polysaccharide-protein complexes of a harmful alga mediate the allelopathic control it exerts within the phytoplankton community.
ISME Journal,
3,
808-817.
Keywords: allelopathy; growth inhibition; growth stimulation; harmful algal blooms (HABs); Heterosigma akashiwo; Skeletonema costatum Strain(s): 10, 324 DOI: 10.1038/ismej.2009.24 |
|
Yamashita, N., Yasojima, M., Nakada, N., Miyajima, K., Komori, K., Suzuki, Y., Tanaka, H.
2006
Effects of antibacterial agents, levofloxacin and clarithromycin, on aquatic organisms.
Water Sci. Technol.,
53,
65-72.
Keywords: antibacterial agent; clarithromycin; ecotoxicity; levofloxacin; risk Strain(s): 35 |
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Yamashita, S., Arakaki, Y., Kawai-Toyooka, H., Noga, A., Hirono, M., Nozaki, H.
2016
Alternative evolution of a spheroidal colony in volvocine algae: developmental analysis of embryogenesis in Astrephomene (Volvocales, Chlorophyta).
BMC Evol. Biol.,
16,
243 (article ID).
Strain(s): 4017, 4018 PubMed: 27829356 DOI: 10.1186/s12862-016-0794-x |
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Yamatogi, T., Miyahara, J., Tanaka, J.
1996
Preculture of noxious red tide flagellate Chattonella antiqua (Raphidophyceae) for AGP assay.
Bull. Nagasaki Pref. Inst. Fish.,
22,
7-13 (in Japanese with English summary).
Strain(s): 1 |
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Yamazaki, T; Hirai, C; Ota, S; Kuwano, K; Kawano, S.
2014
Use of FM1-43, a membrane-specific fluorescent dye, to estimate plasma membrane integrity in the cryopreservation of green algae.
CryoLetters,
35,
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Keywords: FM1-43, cryopreservation, two-step freezing, plasma membrane, green algae, Parachlorella kessleri Strain(s): 2152 |
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Mechanisms for outbreak of Heterosigma akashiwo red tide in Osaka Bay, Japan. Part 1. Nutrient factors involved in controlling the growth of Heterosigma akashiwo Hada.
J. Oceanogr. Soc. Japan,
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Report of Freshwater Fisheries Experiment Station Ibaraki Prefecture,
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Strain(s): 96 |
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Supermatrix data highlight the phylogenetic relationships of photosynthetic Stramenopiles.
Protist,
163,
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Carbonic anhydrase of Chlamydomonas: Pulification and studies on its induction using antiserum against Chlamydomonas carbonic anhydrase.
Plant Cell Physiol.,
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Keywords: affinity chromatography; carbon dioxide concentration; carbonic anhydrase; Chlamydomonas reinhardtii; enzyme induction Strain(s): 2235 |
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Strain(s): 381 |
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Protein phosphatase ihnibition assay for detection of microcystins in lake water and Microcystis cultures.
Mircob. Environ.,
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Keywords: Daphnia kairomone; Scenedesmus; aliphatic sulfate; absolute configuration Strain(s): 802 |
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Isolation of new aliphatic sulfates and sulfamate as the Daphnia kairomones inducing morphological change of a phytoplankton Scenedesmus gutwinskii.
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Keywords: Daphnia kairomone; Scenedesmus; aliphatic sulfate; aliphatic sulfamate Strain(s): 802 |
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Isolation and absolute configuration determination of aliphatic sulfates as the Daphnia kairomones inducing morphological defense of a phytoplankton.
Chem. Pharm. Bull.,
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Keywords: Daphnia kairomone; Scenedesmus; aliphatic sulfate; absolute configulation Strain(s): 802 |
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Aliphatic sulfates released from Daphnia induce morphologiral defense of phytoplankton: isolation and synthesis of kairomones.
Tetrahedron Letters ,
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Keywords: kairomonda; phytoplankton; Daphnia; Scenedesmus; aliphatic sulfate Strain(s): 802 |
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Yasumoto, T.
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Toxin of the marine micro-algae [Kaiyô bisaisôrui no Tokishin].
BIO Medica,
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Excitation energy transfer between photosystem II and photosystem I in red algae: larger amounts of phycobilisome enhance spillover.
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Yokota, A., Kitaoka, S.
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A method for determination of glyoxylate with pumpkin isocitrate lyase and its application to photosynthesizing Euglena gracilis Z.
Plant Sci.,
46,
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Keywords: determination of glyoxylate; pumpkin isocitrate lyase; Euglena gracilis Strain(s): 48 |
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Yokota, A., Kitaoka, S.
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Rates of glycolate synthesis and metabolism during photosynthesis of Euglena and microalgae grown on low CO2.
Planta,
170,
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Keywords: aminooxyacetate; Chlorophyta (microalgae); CO2-concentrating mechanism; cyanobacteria; Euglena; glycolate excretion; photosynthesis (CO2-concentrating mechanism) Strain(s): 48 |
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Yokota, A., Kitaoka, S.
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The mechanism of induction of glycolate excretion by aminooxyacetate in low CO2-grown Euglena gracilis Z.
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J. Phycol.,
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Yongmanitchai, W., Ward, O. P.
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Screening of algae for potential alternative sources of eicosapentaenoic acid.
Phytochemistry,
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Keywords: algae; Thailand; w-3 fatty acids; linolenic acid; eicosapentaenoic acid; docosahexaenoic acid Strain(s): 2256, 2258 |
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Optimal design of scalable photo-bioreactor for phototropic culturing of Haematococcus pluvialis.
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A haptophyte bearing siliceous scales: ultrastructure and phylogenetic position of Hyalolithus neolepis gen. et sp. nov. (Prymnesiophyceae, Haptophyta).
Protist,
157,
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Keywords: biomineralization; silica; Prymnesium; Chrysochromulina; 18S rDNA; rbcL Strain(s): 1393 |
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Intra-specific phenotypic and genotypic variation in toxic cyanobacterial Microcystis aeruginosa.
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Keywords: microcystin; Microcystis; peptide synthetase; population dynamics; real-time PCR; toxic cyanobacteria Strain(s): 298 |
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Yoshida, T., Ancajas, R. R.
1970
Application of the acetylene reduction method in nitrogen fixation studies.
Soil Sci. & Plant Nutr.,
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FEMS Microbiol. Lett.,
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Keywords: cyanobacteria; cell division; DNA replication; FtsZ; Microcystis Strain(s): 298 |
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Yoshida, T., Nagasaki, K., Takashima, Y., Shirai, Y., Tomaru, Y., Takao, Y., Sakamoto, S., Hiroishi, S., Ogata, H.
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Ma-LMM01 infecting toxic Microcystis aeruginosa illuminates diverse cyanophage genome strategies.
J. Bacteriol.,
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Yoshida, T., Nakai, R., Seto, H., Wang, M.-K., Iwataki, M., Hiroishi, S.
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Production of superoxide anion and hydrogen peroxide associated with cell growth of Chattonella antiqua.
Microbes. Environ.,
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Keywords: dinoflagellate; Heterocapsa circularisquama; internal transcribed spacer; ITS; red tide Strain(s): 472, 474, 614 |
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Yoshida, T., Sakamoto, T.
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Water-stress induced trehalose accumulation and control of trehalase in the cyanobacterium Nostoc punctiforme IAM M-15.
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Keywords: compatible solute, desiccation tolerance, post-translational regulation, terrestrial cyanobacterium Strain(s): 2108 DOI: 10.2323/jgam.55.135 |
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Yoshida, T., Takashima, Y., Tomaru Y., Shirai, Y., Takao, Y., Hiroishi, S., Nagasaki, K.
2006
Isolation and characterization of a cyanophage infecting the toxic cyanobacterium Microcystis aeruginosa.
Appl. Environ. Microbiol.,
72,
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Strain(s): 44, 87, 90, 98, 102, 104, 111, 112, 298, 604 |
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Yoshida, T., Yuki, Y., Lei, S., Chinen, H., Yoshida, M., Kondo, R., Hiroishi, S.
2003
Quantitative detection of toxic strains of the cyanobacterial genus Microcystis by competitive PCR.
Microbes. Environ.,
18,
16-23.
Keywords: competitive PCR; microcystin; Microcystis; peptide synthetase; toxic cyanobacteria Strain(s): 87, 88, 89, 90, 102, 104, 105, 106, 108, 109, 110, 111, 112, 298, 299, 604 |
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Yoshida, Y., Fujiwara, T., Imoto, Y., Yoshida, M., Ohnuma, M., Hirooka, S., Misumi, O., Kuroiwa, H., Kato, S., Matsunaga, S., Kuroiwa, T.
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The kinesin-like protein TOP promotes Aurora localisation and induces mitochondrial, chloroplast and nuclear division.
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Keywords: Cell-division cycle, Cyanidioschyzon merolae; Kinesin; Mitochondrial division; Plastid division Strain(s): 3377 PubMed: 23549784 DOI: 10.1242/jcs.116798 |
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Yoshida, Y., Kuroiwa, H., Hirooka, S., Fujiwara, T., Ohnuma, M., Yoshida, M., Misumi, O., Kawano, S., Kuroiwa, T.
2009
The bacterial ZapA-like protein ZED is required for mitochondrial division.
Curr. Biol.,
19,
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Strain(s): 3377 PubMed: 19699094 DOI: 10.1016/j.cub.2009.07.035 |
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Yoshida, Y., Kuroiwa, H., Misumi, O., Yoshida, M., Ohnuma, M., Fujiwara, T., Yagisawa, F., Hirooka, S., Imoto, Y., Matsushita, K., Kawano, S., Kuroiwa, T.
2010
Chloroplasts divide by contraction of a bundle of nanofilaments consisting of polyglucan.
Science,
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Yoshida, Y., Miyagishima, S.-Y., Kuroiwa H., Kuroiwa, T.
2012
The plastid-dividing machinery: formation, constriction and fission.
Curr. Opin. Plant Biol.,
15,
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Yoshii, Y., Takaichi, S., Maoka, T., Hanada, S., Inouye, I.
2002
Characterization of two unique carotenoid fatty acid esters from Pterosperma cristatum (Prasinophyceae, Chlorophyta).
J. Phycol.,
38,
297-303.
Keywords: antenna pigment; carotenoid; Prasinophyceae; Pterosperma; siphonaxanthin; siphonaxanthin ester Strain(s): 936 |
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Yoshii, Y., Takaichi, S., Maoka, T., Inouye, I.
2003
Photosynthetic pigment composition in the primitive green alga Mesostigma viride (Prasinophyceae): phylogenetic and evolutionary implications.
J. Phycol.,
39,
570-576.
Keywords: abscisic acid; carotenoid; Mesostigma; neoxanthin; siphonaxanthin; siphonaxanthin ester Strain(s): 296, 475, 476, 477 |
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Yoshii, Y., Takaichi, S., Maoka, T., Suda, S., Sekiguchi, H., Nakayama, T., Inouye, I.
2005
Variation of siphonaxanthin series among the genus Nephroselmis (Prasinophyceae, Chlorophyta), including a novel primary methoxy carotenoid.
J. Phycol.,
41,
827-834.
Keywords: carotenoids; methylation; Nephroselmis; photosynthetic antenna system; Prasinophyceae; siphonaxanthin series Strain(s): 252, 483, 486, 934, 935, 2309 DOI: 10.1111/j.1529-8817.2005.00103.x |
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Yoshikawa, K., Aikawa, S., Kojima, Y., Toya, Y., Furusawa, C., Kondo, A., Shimizu, H.
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Construction of a genome-scale metabolic model of Arthrospira platensis NIES-39 and metabolic design for cyanobacterial bioproduction.
PLoS One,
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e0144430 (article ID).
Strain(s): 39 DOI: 10.1371/journal.pone.0144430 |
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Yoshikawa, S., Suzuki, T., Watanabe, M., Iseki, M.
2005
Kinetic analysis of the activation of photoactivated adenylyl cyclase (PAC), a blue-light receptor for photomovements of Euglena.
Photochem. Photobiol. Sci.,
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Strain(s): 48 |
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Yoshikawa, T., Ikeda, Y., Sakata, T., Maeda, H.
2011
Cloning and analysis of the ggpS gene from cyanobacteria Arthrospira spp. involved in the synthesis of an osmolyte glucosylglycerol.
Biocontrol Science,
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55-61.
Keywords: Arthrospira; ggpS; Glucosylglycerol; Osmolyte; Synechococcus Strain(s): 39 |
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Yoshimura, S., Ranjbar, R., Inoue, R., Katsuda, T., Katoh, S.
2006
Effective utilization of transmitted light for astaxanthin production by Haematococcus pluvialis.
J. Biosci. Bioeng.,
102,
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Keywords: astaxanthin; Haematococcus pluvialis; transmitted light; physiological response Strain(s): 144 |
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Yoshioka, S., Taniguchi, F., Miura, K., Inoue, T., Yamano, T., Fukuzawa, H.
2004
The novel Myb transcription factor LCR1 regulates the CO2-responsive gene Cah1, encoding a periplasmic carbonic anhydrase in Chlamydomonas reinhardtii.
Plant Cell,
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Strain(s): 2235 PubMed: 15155888 DOI: 10.1105/tpc.021162 |
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Yoshizako, F., Nishimura, A., Chubachi, M.
1992
Microbial reduction of cyclohexanone by Chlorella pyrenoidosa Chick.
J. Ferment. Bioeng.,
74,
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Strain(s): 226 |
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Yoshizako, F., Nishimura, A., Chubachi, M.
1994
Identification of algal transformation products from alicyclic ketones.
J. Ferment. Bioeng.,
77,
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Strain(s): 226 |
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Yoshizako, F., Nishimura, A., Chubachi, M., Horii, T., Ueno, T.
1991
Bioconversion of cyclohexaneacetic acid to monohydroxycyclo-hexaneacetic acids by Chlorella pyrenoidosa Chick.
J. Ferment. Bioeng.,
72,
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Strain(s): 226, 227 |
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Yoshizako, F., Ogino, M., Nishimura, A., Chubachi, M., Horii, T.
1995
Biotransformation of cyclic β-keto esters by Chlorella pyrenoidosa Chick.
J. Ferment. Bioeng.,
79,
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Keywords: Chlorella pyrenoidosa Chick; cyclic β-keto esters; biotransformation; alkoxycarbolyl group elimination; carbonyl group reduction Strain(s): 226 |
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Yuasa, T., Horiguchi, T., Mayama, S., Takahashi, O.
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Gymnoxanthella radiolariae gen. et sp. nov. (Dinophyceae), a dinoflagellate symbiont from solitary polycystine radiolarians.
J. Phycol.,
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Keywords: dinoflagellate; Gymnoxanthella radiolariae gen. et sp. nov.; molecular phylogeny; radiolarians; symbiont; Zooxanthella nutricula Strain(s): 3649 PubMed: 26987091 DOI: 10.1111/jpy.12371 |
|
Yubuki, N., Inagaki, Y., Nakayama, T., Inouye, I.
2007
Ultrastructure and ribosomal RNA phylogeny of the free-living heterotrophic flagellate Dysnectes brevis n.gen., n.sp., a new member of the Fornicata.
J. Eucaryot. Microbiol.,
54,
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Keywords: amitochondriate; Carpediemonas membranifera; diplomonads; Excavata; microaerophilic; retortamonads; typical excavates Strain(s): 1843 DOI: 10.1111/j.1550-7408.2007.00252.x |
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Yubuki, N., Nakayama, T., Inouye, I.
2008
A unique life cycle and perennation in a colorless chrysophyte Spumella sp.
J. Phycol.,
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Keywords: cannibalism; Chrysophyceae; colorless chrysophyte; doubling time; growth rate; heterotrophic flagellate Strain(s): 1846 |
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Yuki, Y., Yoshida, T., Hiroishi, S.
2002
Molecular detection of the toxic cyanobacteria [Yûdoku aoko no bunshi-shikibetsu to yosatsu he-no ôyô].
In Series of Fisheries Science Vol. 143, Prevention and Extermination Strategies of Harmful Algal Blooms [Suisan-gaku shirîzu 134, Yûgai-yûdoku sôrui burûmu no yobô to kujo] , Eds. by Hiroishi, S., Imai, I. & Ishimaru, T., Koseisha-Koseikaku, Tokyo,
p. 43-53 (in Japanese without English title).
Strain(s): 73, 81, 87, 88, 89, 90, 91, 98, 99, 100, 101, 102, 104, 105, 106, 108, 109, 110, 111, 112, 204, 230, 298, 299, 604 |
|
Yuki-jirushi [Snow Brand] Milk Products Co.Ltd., Showa Denko K.K.
1992
Separation and purification of useful substances from Euglena [Euglena kara no yûyô-busshitsu no Bunri Seisei].
In The Advanced Technology of the Separation and Purification of the Materials for Physiologically Functional Foods and Their Development [Kinôsei Shokuhin Sozai no Kôdo Bunri Seisei to Kaihatsu], Ed. and published by The Japanese Research and Development Association for the High Separation System in Food Industry [Shokuhin Sangyô Hai-separêshon Sisutemu Gijutu Kenkyû Kumiai], Tokyo,
p. 363-382 (in Japanese without English title).
Strain(s): 48 |
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Yumoto, K., Kasai, F., Kawachi, M.
2013
Taxonomic re-examination of Chlamydomonas strains maintained in the NIES-Collection.
Microbiol. Cult. Coll.,
29,
1-12.
Strain(s): 158, 437, 438, 440, 884, 968, 1021, 1022, 1048, 1733, 1848, 1849, 2201, 2202, 2203, 2204, 2206, 2207, 2208, 2209, 2210, 2211, 2212, 2213, 2214, 2215, 2216, 2218, 2219, 2220, 2222, 2223, 2224, 2225, 2228, 2229, 2230, 2231, 2233, 2234, 2235, 2236, 2237, 2239, 2240, 2241, 2242, 2243, 2246, 2247, 2248, 2314, 2315, 2316, 2317, 2318, 2319, 2320, 2321, 2322, 2323, 2324, 2462, 2463, 2499, 2575, 2576, 2577, 2578, 2579 |
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Yagi, Satoshi, Kawakami, H., Fujiwara, T., Ishikawa, N., Ito, A., Sasamoto, M., Umita, T.
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Individual and combined toxicity of antibacterial substances to green alga Pseudokirchneriella subcapitata.
J. Jpn. Soc. Wat. Environ.,
3,
63-70 (in Japanese with English summary).
Keywords: Green algar; EC50; Toxicity test; Antibacterial substance; Combined toxicity Strain(s): 35 DOI: 10.2965/jswe.39.63 |
|
Yamashita, N., Tanaka, H., Miyajima, K., Suzuki, Y.
2006
Evaluation of effect of seaage effluent on river water quality using AGP and algal growth inhibition tests.
J. JSCE,
62,
191-200 (in Japanese with English summary).
Keywords: AGP test; algal growth inhibition test; sewage effluent; Tama River Strain(s): 35 |
|
Yamaguchi, H., Nishijima, T., Nishitani, H., Fukami, K., Adachi, M.
2004
Organic phosphorus utilization and alkaline phosphatase production of 3 red tide photoplankton.
Nippon Suisan Gakkaishi,
70,
123-130 (in Japanese with English summary).
Keywords: Karenia mikimotoi; Skeletonema costatum; Heterosigma akashiwo; red tide phytoplankton; organic phosphorus; alkaline phosphatase Strain(s): 5, 324 |
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Yoshimura, T., Yanagawa, T., Fujiwara, A., Murai, K., Nogata, Y., Furuta, T., Kobayashi, T.
2016
Marine diatom Coscinodiscus wailesiii inhibits DPD measurement of residual chlorine in seawater samples.
Sessile Organisms,
33,
38-43 (in Japanese with English summary).
Keywords: Residual chlorine; DPD; Seawater; Coscinodiscus wailesii Strain(s): 1, 5, 237, 323 DOI: 10.4282/sosj.33.38 |
|
Yukino, T., Hayashi, M., Inoue, Y., Imamura, J., Nagano, N., Murata, H.
2005
Preparation of docosahexaenoic acid fortified Spirulina platensis and its lipid and fatty acid compositions.
Nippon Suisan Gakkaishi,
71,
74-79 (in Japanese with English summary).
Keywords: docosahexaenoic acid; DHA; Spirulina; foods with function claims Strain(s): 39 |
|
Yamagishi, T., Yamaguchi, H., Suzuki, S., Horie, Y., Tatarazako, N.
2017
Cell reproductive patterns in the green alga Pseudokirchneriella subcapitata (=Selenastrum capricornutum) and their variations under exposure to the typical toxicants potassium dichromate and 3,5-DCP.
PLoS One,
12,
e0171259 (article ID).
Strain(s): 35 PubMed: 28152022 DOI: 10.1371/journal.pone.0171259 |
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Yamagishi, T., Horie, Y., Tatarazako, N.
2017
Synergism between macrolide antibiotics and the azole fungicide ketoconazole in growth inhibition testing of the green alga Pseudokirchneriella subcapitata.
Chemosphere,
174,
1-7.
Keywords: Azole fungicide; Clarithromycin; Erythromycin; Isobologram; Ketoconazole; Pseudokirchneriella subcapitata Strain(s): 35 PubMed: 28152378 DOI: 10.1016/j.chemosphere.2017.01.071 |
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Yamada, M., Otsubo, M., Tsutsumi, Y., Mizota, C., Nakamura, Y., Takahashi, K., Iwataki M.
2017
Utility of mitochondrial-encoded cytochrome c oxidase I gene for phylogenetic analysis and species identification of the planktonic diatom genus Skeletonema.
Phycol. Res.,
65,
217-225.
Keywords: cox1; genetic marker; LSU rDNA; phylogenetictree; species delimitation; SSU rDNA Strain(s): 16, 223, 2837, 2838, 2842 DOI: 10.1111/pre.12179 |
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Yamamoto, K., Kawai-Toyooka, H., Hamaji, T., Tsuchikane, Y., Mori, T., Takahashi, F., Sekimoto, H., Ferris, P. J., Nozaki, H.
2017
Molecular evolutionary analysis of a gender-limited MID ortholog from the homothallic species Volvox africanus with male and monoecious spheroids.
PLoS One,
e0180313 (article ID).
Strain(s): 3780, 3782, 3783, 3785, 3786, 3986 DOI: 10.1371/journal.pone.0180313 |
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