Search Reference

Abe, J., Hori, S., Tsuchikane, Y., Kitao, N., Kato, M., Shiraiwa, H. 2011 Stable nuclear transformation of the Closterium complex. Plant Cell Physiol., 52, 1676-1685.
Strain(s): 67 
Abe, J., Kubo, T., Takagi, Y., Saito, T., Miura, K., Fukuzawa, H., Matsuda, Y. 2004 The transcriptional program of synchronous gametogenesis in Chlamydomonas reinhardtii. Curr. Genet., 46, 302-315.
Strain(s): 2235 
Abe, T., Tsuzuki, M., Kaplan, A., Miyachi, S. 1987 Transport and fixation of inorganic carbon during photosynthesis of Anabaena grown under ordinary air. II. Effect of sodium concentration during growth on the induction of active transport system for IC. Plant Cell Physiol., 28, 671-677.
Keywords: Anabaena variabilis; CO2 accumulation; cyanobacterial growth; photosynthesis; sodium
Strain(s): 2093 
Abe, T., Tsuzuki, M., Miyachi, S. 1987 Transport and fixation of inorganic carbon during photosynthesis of Anabaena grown under ordinary air. I. Active species of inorganic carbon utilized for photosynthesis. Plant Cell Physiol., 28, 273-281.
Keywords: Anabaena; carbon dioxide fixation; cyanobacterium; IC transport photosynthesis
Strain(s): 2093 
Abe, T., Tsuzuki, M., Miyachi, S. 1987 Transport and fixation of inorganic carbon during photosynthesis of Anabaena grown under ordinary air. III. Some characteristics of the HCO3-transport system in cells grown under ordinary air. Plant Cell Physiol., 28, 867-874.
Keywords: Anabaena; carbonic anhydrase; IC transport; photosynthesis; sodium
Strain(s): 2093 
Aikawa, S., Izumi, Y., Matsuda, F., Hasunuma, T., Chang, J.-S., Kondo, A. 2012 Synergistic enhancement of glycogen production in Arthrospira platensis by optimization of light intensity and nitrate supply. Biores. Technol., 108, 211-215.
Keywords: Arthrospira platensis; Glycogen; Cyanobacteria; Light intensity; Nitrogen starvation
Strain(s): 39 
DOI: 10.1016/j.biortech.2012.01.004
Aikawa, S., Joseph, A., Yamada, R., Izumi, Y., Yamagishi, T., Matsuda, F., Kawai, H., Chang, J.-S., Hasunuma, T., Kondo, A. 2013 Direct conversion of Spirulina to ethanol without pretreatment or enzymatic hydrolysis processes. Energ. Environ. Sci., 6, 1844-1849.
Strain(s): 39 
DOI: 10.1039/C3EE40305J
Aizawa, K., Miyachi, S. 1986 Carbonic anhydrase and CO2 concentrating mechanisms in microalgae and cyanobacteria. FEMS Microbiol. Lett., 39, 215-233.
Keywords: aquatic algae; cyanobacteria; photoautotrophs; photorespiration; photosynthesis; transport
Strain(s): 2235 
Aizawa, K., Nakamura, Y., Miyachi, S. 1985 Variation of phosphoenolpyruvate carboxylase activity in Dunaliella associated with changes in atmospheric CO2 concentration. Plant Cell Physiol., 26, 1199-1203.
Keywords: carbonic anhydrase; Dunaliella; phosphoenolpyruvate carboxylase; photosynthesis; Porphyridium
Strain(s): 2138 
Aizawa, K., Tsuzuki, M., Miyachi, S. 1986 Kinetic studies on fhe active species of inorganic carbon absorbed by the cells of Dunaliella tertiolecta. Plant Cell Physiol., 27, 37-47.
Keywords: bicarbonate utilization; carbon dioxide; carbonic anhydrase; cell surface; Dunaliella tertiolecta; photosynthesis
Strain(s): 2170 
Akao, S., Hosoi, Y., Fujiwara, T. 2014 Utilization of water chestnut for reclamation of water environment and control of cyanobacterial blooms. Environ. Sci. Pollut. Res., 21, 2249-2255.
Keywords: Nitrogen; Phosphorus; Phenolic compounds; Potassium; Trapa natans
Strain(s): 87 
DOI: 10.1007/s11356-013-2102-2
Akatsuka, S., Sekimoto, H., Iwai, H., Fukumoto, R., Fujii, T. 2003 Mucilage secretion regulated by sex pheromones in Closterium peracerosum-strigosum-littorale complex. Plant Cell Physiol., 44, 1081-1087.
Keywords: Closterium; mucilage; sex pheromone; sexual reproduction
Strain(s): 67 
Akatsuka, S., Tsuchikane, Y., Fukumoto, R., Fujii, T., Sekimoto, H. 2006 Physiological characterization of the sex pheromone protoplast-release-inducing protein from the Closterium peracerosum-strigosum-littorale complex (Charophyta). Phycol. Res., 54, 116-121.
Keywords: Closterium; conjugation; mucilage; protoplast release; sex pheromone; sexual reproduction
Strain(s): 67 
Akcaalan, R., Young, FM., Metcalf, JS., Morrison, LF., Albay, M., Codd, GA. 2006 Microcystin analysis in single filaments of Planktothrix spp. in laboratory cultures and environmental blooms. Wat. Res., 40, 1583-1590.
Keywords: Planktothrix rubescens; Planktothrix agardhii; Microcystin immunoassay; Single filaments; Cyanobacteria
Strain(s): 595 
Aktas, T. S., Takeda, F., Maruo, C., Chiba, N., Nishimura, O. 2012 A comparison of zeta potentials and coagulation behaviors of cyanobacteria amd algae. Desalin. Water Treat., 48, 294-301.
Keywords: Zeta potential; Coagulation; Turbidity; Cyanobacteria; algae
Strain(s): 8713482170 
Alamsjah, M. A., Hirao, S., Ishibashi, F., Fujita , Y. 2005 Isolation and structure determination of algicidal compounds from Ulva fasciata. Biosci. Biotechnol. Biochem., 69, 2186-2192.
Keywords: algicidal compounds; Ulva fasciata; hexadeca-4,7,10,13-tetraenoic acid; octadeca-6,9,12,15-tetraenoic acid; α-linolenic acid
Strain(s): 15462 
Alamsjah, M. A., Hirao, S., Ishibashi, F., Oda, T., Fujita, Y. 2008 Algicidal activity of polyunsaturated fatty acids derived from Ulva fasciata and U. pertusa (Ulvaceae, Chlorophyta) on phytoplankton. J. Appl. Phycol., 20, 713-720.
Keywords: Algicidal compound; Red tide phytoplankton; Ulva fasciata; Ulva pertusa
Strain(s): 13251252254359462486 
Alamsjah, M. A., Ishibe, K., Kim, D., Yamaguchi, K., Ishibashi, F., Fujita, Y., Oda, T. 2007 Selective toxic effects of polyunsaturated fatty acids derived from Ulva fasciata on red tide phytoplankter species. Biosci. Biotechnol. Biochem., 71, 265-268.
Keywords: α-linolenic acid; linoleic acid; Ulva fasciata; red tide phytoplankter
Strain(s): 3 
Allen, M. B. 1959 Studies with Cyanidium caldarium, an anomalously pigmented chlorophyte. Arch. Mikrobiol., 32, 270-277.
Strain(s): 298 
Allewaert, C. C., Vanormelingen, P., Daveloose, I., Vyverman, T. 2017 Intraspecific trait variation affecting astaxanthin productivity in two Haematococcus (Chlorophyceae) species. Algal Research, 21, 191-202.
Keywords: Astaxanthin productivity; Haematococcus pluvialis; Haematococcus rubicundus; Functional traits; Common-garden experiment; Intraspecific variation
Strain(s): 144 
DOI: 10.1016/j.algal.2016.10.021
Anas, A. R. J., Nakajima, A., Naruse, C., Tone, M., Asukabe, H., Harada, K. 2016 Determination of fVIIa-sTF inhibitors in toxic Microcystis cyanobacteria by LC-MS technique. Mar. Drugs, 14, 7 (article ID).
Keywords: cyanobacteria; toxic Microcystis; anticoagulant; fVIIa-sTF inhibitors; peptides; aeruginosins; blood coagulation cascade
Strain(s): 891021031072981025104310581071108510991133 
PubMed: 26729138
DOI: 10.3390/md14010007
Ando, T., Nagase, H., Eguchi, K., Hirooka, T., Nakamura, T., Miyamoto, K., Hirata, K. 2007 A novel method using cyanobacteria for ecotoxicity test of veterinary antimicrobial agents. Environ. Toxicol. Chem., 26, 601-606.
Keywords: Antimicrobial agent; Cyanobacterium; Ecotoxicity test; Algal toxicity
Strain(s): 192344107 
Ando, T., Otsuka, S., Nishiyama, M., Sendo, K., Watanabe, M. M., Matsumoto, S. 2003 Toxic effects of dichloromethane and trichloroethlene on the growth of planktonic green algae, Chlorella vulgaris NIES227, Selenastrum capricornutum NIES35, and Volvulina steinii NIES545. Microbes. Environ., 18, 43-46.
Keywords: algal growth potential (AGP); bioindicator; dichloromethane; organic solvents; trichloroethlene
Strain(s): 35227545 
Aoki, S., Miyachi, S. 1964 Chromatographic analysis of acid-soluble polyphosphates in Chlorella cells. Plant Cell Physiol., 5, 241-250.
Strain(s): 2170 
Aoki, S., Ohara, S., Kimura, K., Mizuguchi, H., Fuse, Y., Yamada, E. 2008 Characterization of fluorophores released from three kinds of lake phytoplankton using gel chromatography and fluorescence spectrophotometry. Anal. Sci., 24, 1461-1467.
Strain(s): 109275665 
Aoshima, J., Kubota, M., Nishimura, T., Iwamura, T. 1984 DNA polymerases of Chlorella. II. Characterization to distinguish the two enzymes. J. Biochem., 96, 461-473.
Strain(s): 2170 
Aoshima, J., Nishimura, T., Iwamura, T. 1982 DNA polymerases of Chlorella. I. Chloroplastic and nuclear DNA polymerases in synchronized algal cells. Cell Struct. Funct., 7, 327-340.
Strain(s): 2170 
Aoyama, K., Miyata, N., Iwahori, K. 2005 Evalution of DNA damaging potential in landfill leachates by comet assay using Euglena gracilis. Jpn. J. Water Treat. Biol., 41, 73-81.
Keywords: comet assay; Euglena gracilis; landfill leachate; umu test
Strain(s): 49 
Aoyama, K., Uemura, I., Miyake, J., Asada, Y. 1997 Fermentative metabolism to produce hydrogen gas and organic compounds in a cyanobacterium, Spirulina platensis. J. Ferment. Bioeng., 83, 17-20.
Keywords: Spirulina; hydrogen; organic acid; ethanol
Strain(s): 46 
Araie, H., Sakamoto, K., Suzuki, I., Shiraiwa, Y. 2011 Characterization of the selenite uptake mechanism in the coccolithophore Emiliania huxleyi (Haptophyta). Plant Cell Physiol., 52, 1204-1210.
Strain(s): 837 
Archibald, P. A. 1975 Trebouxia de Pulmaly (Chlorophyceae, Chlorococcales) and Pseudotrebouxia gen. nov. (Chlorophyceae, Chlorosarcinales). Phycologia, 14, 125-137.
Strain(s): 21832185218621872188 
Arikawa, M., Saito, A., Omura, G., Khan, S. M. M. K., Kinoshita, E., Suzaki, T. 2002 Ca2+-dependent cytoplasmic contractility of the heliozoan Actinophrys sol. Eur. J. Protistol., 38, 365-372.
Keywords: Cell model; Permeabilization; Contractile tubules; Heliozoa; Protozoa
Strain(s): 2497 
DOI: 10.1078/0932-4739-00879
Arikawa, M., Saito, A., Omura, G., Khan, S. M. M. K., Suetomo, Y., Kakuta, S., Suzaki, T. 2005 Ca2+-dependent nuclear contraction of heliozoan Actinophrys sol. Cell Calcium, 38, 447-455.
Strain(s): 2497 
Arikawa, M., Saito, A., Omura, G., Khan, S. M. M. K., Suetomo, Y., Kakuta, S., Suzaki, T. 2006 Ca2+-dependent in vivo contractility of a precipitate isolated from an extract of the heliozoan Actinophrys sol. Cell Motil. Cytoskeleton, 63, 57-65.
Keywords: contraction; precipitate; heliozoan; protozoa
Strain(s): 2497 
Arima, H., Horiguchi, N., Takaichi, S., Kofuji, R., Ishida, K-I., Wada, K., Sakamoto, T. 2012 Molecular genetic and chemotaxonomic characterization of the terrestrial cyanobacterium Nostoc commune and its neighboring species. FEMS Microbiol. Ecol., 79, 34-45.
Keywords: Anhydrobiosis; carotenoid; ferredoxin-NADP; oxidoreductase; nitrate/nitrite transporter; random amplified polymorphic DNA; water stress protein
Strain(s): 24282107210825382539 
DOI: 10.1111/j.1574-6941.2011.01195.x
Aruga, Y. 1965 Ecological studies of photo-synthesis and matter production of phytoplankton II. Photosynthesis of algae in relation to light intensity and temperature. Bot. Mag. Tokyo, 78, 360-365.
Strain(s): 19 
Asada, C., Doi, K., Sasaki, C., Nakamura, Y. 2012 Efficient extraction of starch from microalgae using ultrasonic homogenizer and its conversion into ethanol by simultaneous saccharification and fermentation. Natural Resources, 3, 175-179
Keywords: Bioethanol; Microalgae; Ultrasonic Treatment; Homoginizer; Starch
Strain(s): 437 
Asada, Y., Kawamura, S. 1986 Screening for cyanobacteria that evolve molecular hydrogen under dark and anaerobic conditions. J. Ferment. Technol., 64, 553-556.
Strain(s): 192336394621193277 
Asada, Y., Kawamura, S., Ho, K.-K. 1987 Hydrogenase from the unicellular cyano-bacterium, Microcystis aeruginosa. Phytochemistry, 26, 637-640.
Keywords: Microcystis aeruginosa; cyanobacterium; hydrogenase; purification; properties
Strain(s): 44 
Asai, R., Matsukawa, R., Ikebukuro, K., Karube, I. 1998 Chemiluminescence flow-injection system for rapid detection of red tide phytoplankton, Chattonella antiqua. Anal. Lett., 31, 2279-2288.
Keywords: chemiluminescence; flow injection; superoxide; luciferin analogue; red tide
Strain(s): 113 
DOI: 10.1080/00032719808005302
Asai, R., Matsukawa, R., Ikebukuro, K., Karube, I. 1999 Highly sensitive chemiluminescence flow-injection detection of the red tide phytoplankton Heterosigma carterae. Anal. Chim. Acta, 390, 237-244.
Keywords: Chemiluminescence; Flow injection analysis; Red tide phytoplankton; Superoxide; Hydrogen peroxide; Heterosigma carterae
Strain(s): 586 
Asai, R., Ootani, K., Nomura, Y., Nakamura, C., Ikebukuro, K., Arikawa, Y., Miyake, J., Karube, I. 2003 PCR-based ribosomal DNA detection technique for microalga (Heterosigma carterae) causing red tide and its application to a biosensor using labeled probe. Mar. Biotechnol., 5, 417-423.
Keywords: small subunit rDNA; Heterosigma carterae; fluorescence polarization; asymmetric polymerase chain reaction; surface plasmon resonance
Strain(s): 144 
DOI: 10.1007/s10126-002-0081-2
Asamizu, E., Miura, K., Kucho, K., Inoue, Y., Fukuzawa, H., Ohyama, K., Nakamura, Y., Tabata, S. 2000 Generation of expressed sequence tags from low-CO2 and high-CO2 adapted cells of Chlamydomonas reinhardtii. DNA Res., 7, 305-307.
Keywords: Chlamydomonas reinhardtii; cDNA; EST; CO2 stress
Strain(s): 2235 
Asamizu, E., Nakamura, Y., Miura, K., Fukuzawa, H., Fujiwara, S., Hirono, M., Iwamoto, K., Matsuda, Y., Minagawa, J., Shimogawara, K., Takahashi, Y., Tabata, S. 2004 Establishment of publicly available cDNA material and information resource of Chlamydomonas reinhardtii (Chlorophyta), to facilitate gene function analysis. Phycologia, 43, 722-726.
Strain(s): 2235 
Asamizu, E., Nakamura, Y., Sato, S., Fukuzawa, H., Tabata, S. 1999 A large scale structure analysis of cDNAs in a unicellular green alga, Chlamydomonas reinhardtii. I. Generation of 3433 non-redundant expressed sequence tags. DNA Res., 6, 369-373.
Keywords: green alga; Chlamydomonas reinhardtii; cDNA; EST; normalized library; similarity search
Strain(s): 2235 
Baker, J. A., Entsch, B., McKay, D. B. 2003 The cyanobiont in an Azolla fern is neither Anabaena nor Nostoc. FEMS Mircobiol. Lett., 229, 43-47.
Keywords: Azolla fern; Cyanobacterial symbiont; Phylogenetic relationship
Strain(s): 80 
PubMed: 14659541
DOI: 10.1016/S0378-1097(03)00784-5
Baldia, S. F., Fukami, K., Nishijima, T., Hata, T. 1995 Growth responses of Spirulina platensis to some physico-chemical factors and the kinetics of phosphorus utilization. Fish. Sci., 61, 331-335.
Keywords: Spirulina platensis; growth kinetics; physico-chemical factors; organic phosphorus; waste water
Strain(s): 46 
Baldia, S. F., Nishijima, T., Fukami, K., Hata, Y. 1994 Studies on the chemical composition of a cyanophyte, Spirulina platensis. In The Third Asian Fisheries Forum, Eds. by Chou, L. M., et al., Asian Fisheries Society, Manila, Philippines, 1994, pp. 940-943.
Strain(s): 46 
Ban, S. 1992 Effects of photoperiod, temperature, and population density on induction of diapause egg production in Eurytemora affinis (Copepoda: Calanoida) in Lake Ohnuma, Hokkaido, Japan. J. Crustacean Biol., 12, 361-367.
Strain(s): 2822235 
Ban, S. 1994 Effect of temperature and food concentration on post-embryonic development, egg production and adult body size of calanoid copepod Eurytemora affinis. J. Plankton Res., 16, 721-735.
Strain(s): 282 
Ban, S., Minoda, T. 1994 Induction of diapause egg production in Eurytemora affinis by their own metabolites. Hydrobiologia, 292/293, 185-189.
Keywords: crowding effect; metabolites; diapause induction; Eurytemora affinis
Strain(s): 282 
Bass, D., Howe, A. T., Mylnikov, A. P., Vickerman, K., Chao, E. E., Smallbone, J. E., Snell, J., Cabral Jr., C., Cavalier-Smith, T. 2009 Phylogeny and classification of Cercomonadida (Protozoa, Cercozoa): Cercomonas, Eocercomonas, Paracercomonas, and Cavernomonas gen. nov.. Protist, 160, 483-521.
Keywords: Cercomonas; Eocercomonas; Paracercomonas; Cavernomonas; 18S rDNA phylogeny; Agitata
Strain(s): 243424352436243724382439244024412442244324442445244924502451245224532454 
DOI: 10.1016/j.protis.2009.01.004
Becker, B., Melkonian, M. 1991 2-keto-sugar acids in green flagellates: A chemical marker for prasinophycean scales. J. Phycol., 27, 498-504.
Keywords: cell wall composition; Chlorophyta; 2-keto-sugar acids; Prasinophyceae; scale composition
Strain(s): 2253 
Belmans, D., Laere, A. V. 1988 Effect of ionophores on the ATP-pool and glycerol content in cells of the halotolerant green alga Dunaliella tertiolecta. J. Gen. Microbiol., 134, 2261-2268.
Strain(s): 2258 
Beltran, E. C., Neilan, B. 2000 Geographical segregation of the neurotoxin-producing cyanobacterium Anabaena circinalis. Appl. Environ. Microbiol., 66, 4468-4474.
Strain(s): 192380 
Berge, T., Daugbjerg, N., Hansen, P. J. 2012 Isolation and cultivation of microalgae select for low growth rate and tolerance to high pH. Harmful Algae, 20, 101-110.
Keywords: Culture; Growth rates; Harmful algal blooms; Heterocapsa triquetra; Interspecific variation; Laboratory selection; pH; Phytoplankton; Species; Strains
Strain(s): 235 
Blanc, G., Agarkova, I., Grimwood, J., Kou, A., Brueggeman, A., Dunigan, D. D., Gurnon, J., Ladunga, I., Lindquist, E., Lucas, S., Pangilinan, J., Proschold, T., Salamov, A., Schmutz, J., Weeks, D., Yamada, T., Lomsadze, A., Borodovsky, M., Claverie, J. M., Grigoriev, I. V., Van Etten, J. L. 2012 The genome of the polar eukaryotic microalga Coccomyxa subellipsoidea reveals traits of cold adaptation. Genome Biol., 13, R39 (article ID).
Strain(s): 2166 
PubMed: 22630137
DOI: 10.1186/gb-2012-13-5-r39
Bouchier, C., Hertweck, C., de Marsac, N. T., Dittmann, E. 2008 Microcyclamide biosynthesis in two strains of Microcystis aeruginosa: from structure to genes and vice versa. Appl. Environ. Microbiol., 74, 1791-1797.
Strain(s): 298 
Brand, J. J., Wright, J. N. 1989 Hydrogen production by eukaryotic algae. Biotech. Bioeng., 33, 1482-1488.
Strain(s): 215121692190219422012204221122792291 
Brooks, A. E. 1966 The sexual cycle and intercrossing in the genus Astrephomene. J. Protozool., 13, 367-375.
Strain(s): 853 
Brown, I. I., Mummey, D., Cooksey. K. E. 2005 A novel cyanobacterium exhibiting an elevated tolerance for iron. FEMS Microbiol. Ecol., 52, 307-314.
Keywords: Novel cyanobacterium; Iron tolerance; Iron depositing hot spring; Great Yellowstone area
Strain(s): 1031 
Buchmanna, K., Becker, B. 2009 The system of contractile vacuoles in the green alga Mesostigma viride (Streptophyta). Protist, 160, 427-443.
Keywords: Mesostigma viride; Streptophyta; contractile vacuole; 3-D reconstruction; transmission electron microscopy
Strain(s): 476 
Bürger, J., Miyachi, S., Galland, P., Senger, H. 1988 Quantum requirements of photosynthetic oxygen evolution and 77K fluorescence emission spectra in unicellular green algae grown under low- and high-CO2-conditions. Botanica Acta, 101, 229-232.
Strain(s): 2235 
Busch, A., Nield, J., Hippler, M. 2010 The composition and structure of photosystem I-associatied antenna from Cyanidioschyzon merolae. Plant J., 62, 886-897.
Keywords: Cyanidioschyzon merolae; Lhcr; photosystem I; phycobilisomes; proteomics
Strain(s): 3377 
PubMed: 20230507
DOI: 10.1111/j.1365-313X.2010.04202.x
Cadel-Six, S., Dauga, C., Castets, A. M., Rippka, R., Bouchier, C., de Marsac, N. T., Welker, M. 2008 Halogenase genes in nonribosomal peptide synthetase gene clusters of Microcystis (Cyanobacteria): sporadic distribution and evolution. Mol. Biol. Evol., 25, 2031-2041.
Keywords: halogenase; cyanopeptolin; aeruginosin; DNA rearrangement; secondary peptide metabolite; chlorination; internal transcribed spacer; phylogeny
Strain(s): 8998102298 
PubMed: 18614525
DOI: 10.1093/molbev/msn150
Canini, A., Civitareale, P., Marini, S., Grilli Caiola, M., Rotilio, G. 1992 Purification of iron superoxide dismutase from the cyano-bacterium Anabaena cylindrica Lemm. and localization of the enzyme in heterocysts by immunogold labeling. Planta, 187, 438-444.
Keywords: Anabaena; heterocyst; iron-superoxide dismutase (immunogold labeling)
Strain(s): 19 
Cannell, R. J. P., Owsianka, A. M., Walker, J. M. 1988 Results of a large-scale screening programme to detect antibacterial activity from freshwater algae. Br. Phycol. J., 23, 41-44.
Strain(s): 6862287 
Cao, H., Shimura, Y., Kawachi, M., Yin, Y. 2014 Draft genome sequence of the toxic bloom-forming cyanobacterium Aphanizomenon flos-aquae NIES-81. GenomeA, 2, e00044-14 (article ID).
Strain(s): 81 
DOI: 10.1128/genomeA.00044-14
Cardol, P., Bailleul, B., Rappaport, F., Derelle, E., Béal, D., Breyton, C., Bailey, S., Wollman, F. A., Grossman, A., Moreau, H., Finazzi, G. 2008 An original adaptation of photosynthesis in the marine green alga Ostreococcus. Proc. Nati. Acad. Sci. U. S. A., 105, 7881-7886.
Keywords: marine environment; PTOX; water cycle; eletron flow; photoprotection
Strain(s): 2674 
PubMed: 18511560
DOI: 10.1073/pnas.08027621
Carefoot, J. R. 1966 Sexual reproduction and intercrossing in Volvulina steinii. J. Phycol., 2, 150-156.
Strain(s): 896897898 
DOI: 10.1111/j.1529-8817.1966.tb04614.x
Cattolico, R. A., Jacobs, M. A., Zhou, Y., Chang, J., Duplessis, M., Lybrand, T., McKay, J., Ong, H. C., Sims, E., Rocap, G. 2008 Chloroplast genome sequencing analysis of Heterosigma akashiwo CCAM452 (West Atlantic) and NIES293 (West Pacific) strains. BMC Genomics, 9, 211-230.
Strain(s): 293 
Chihara, M., Inouye, I., Takahata, N. 1986 Oltmannsiellopsis., a new genus of marine flagellate (Dunaliellaceae, Chlorophyceae). Arch. Protistenk., 132, 313-324.
Strain(s): 359360 
DOI: 10.1016/S0003-9365(86)80026-4
Chiu, Y.-T., Yen, H.-K., Lin, T.-F. 2016 An alternativemethodtoquantify2-MIB producing cyanobacteriain in drinking water reservoirs: Method development and field applications. Environ. Res., 151, 618-627.
Keywords: Cyanobacteria; 2-methylisoborneol(2-MIB); 2-MIB-synthesis gene(mibC gene); Tasteandodor; Real-timePCR
Strain(s): 8151282490521042116 
DOI: 10.1016/j.envres.2016.08.034
Cho, Y., Ozeki, R., Yotsu-Yamashita, M., Oshima, Y. 2013 Single-cell analysis of paralytic shellfish toxins in Alexandrium tamarense by HPLC with post-column fluorescent derivatization. Harmful Algae, 25, 47-53.
Keywords: Single-cell analysis; Alexandrium tamarense; Paralytic shellfish toxins
Strain(s): 678 
DOI: 10.1016/j.hal.2013.02.005
Choi, G-G., Ahn, C-Y., Oh, H-M. 2012 Phylogenetic relationships of Arthrospira strains inferred from 16S rRNA gene and cpcBA-IGS sequences. Algae, 27, 75-82.
Keywords: Arthrospira (Spirulina); cpcBA-IGS; phylogenetic analysis; 16S rRNA gene
Strain(s): 3946 
Choi, K., Imai, A., Kim, B., Matsushige, K. 2001 Properties of dissolved organic carbon (DOC) released by three species of blue-green algae. Korean J. Limnol., 34, 20-29.
Keywords: extracellular organic carbon; fractionation; blue-green algae; growth phases
Strain(s): 4474 
Choi, K., Ueki, M., Imai, A., Kim, B., Kawabata, Z. 2004 Photoalternation of dissolved organic matter (DOM) released from Microcystis aeruginosa in different growth phases: DOM-fraction distribution and biodegradability. Arch. Hydrobiol., 159, 271-286.
Keywords: algal DOM; growth phase; UV effects; photoalteration; biodegradability; chemical composition
Strain(s): 843 
Chong, J., Jackson, C., Kim, J. I., Yoon, H. S., Reyes-Prieto, A. 2014 Molecular markers from different genomic compartments reveal cryptic diversity within glaucophyte species. Mol. Phylogenet. Evol., 76, 181-188.
Keywords: Glaucophyta; Cyanophora; Glaucocystis; Cryptic species diversity; Archaeplastida
Strain(s): 76313691961 
DOI: 10.1016/j.ympev.2014.03.019
Chonudomkul, D., Yongmanitchai, W., Theeragool, G., Kawachi, M., Kasai, F., Kaya, K., Watanabe, M. M. 2004 Morphology, genetic diversity, temperature tolerance and toxicity of Cylindrospermopsis raciborskii (Nostocales, Cyanobacteria) strains from Thailand and Japan. FEMS Microbiol. Ecol., 48, 345-355.
Keywords: toxic cyanobacteria; Cylindrospermopsis raciborskii; STRR sequences; Thailand; Japan; low-temperature adapted group; genotypic clusters
Strain(s): 99199310401041 
DOI: 10.1016/j.femsec.2004.02.014
Chumpolkulwong, N., Kakizono, T., Ishii, H. 1997 Enzymatic conversion of b-carotene to astaxanthin by cell-extracts of a green alga Haematococcus pluvialis. Biotechnol. Lett., 19, 443-446.
Strain(s): 144 
Ciniglia, C., Cascone, C., Giudice, R. L., Pinto, G., Pollio, A. 2005 Application of methods for assessing the geno- and cytotoxicity of Triclosan to C. ehrenbergii. J. Hazard. Mater., 122, 227-232.
Keywords: Closterium ehrenbergii; Triclosan; sexual reproduction; vegetative reproduction; comet assay
Strain(s): 228229 
Coesel, P. F. M. 1991 Ammonium dependency in Closterium aciculare T. West, a planktonic desmid from alkaline, eutrophic waters. J. Plankton Res., 13, 913-922.
Strain(s): 258 
Connell, L. 2002 Rapid identification of marine algae (Raphidophyceae) using three-primer peR amplification of nuclear internal transcribed spacer (ITS) regions from fresh and archived material. Phycologia, 41, 15-21.
Strain(s): 115 
Connell, L., Cattolico, R. A. 1996 Fragile algae: axenic culture of field-collected samples of Heterosigma carterae. Mar. Biol., 125, 421-426.
Strain(s): 293 
Crosbie, N. D., Pöckl, M., Weisse, T. 2003 Dispersal and phylogenetic diversity of nonmarine picocyanobacteria, inferred from 16S rRNA gene and cpcBA-intergenic spacer sequence analyses. Appl. Environ. Microbiol., 69, 5716-5721.
Strain(s): 13411342134313441345134613471348 
Crosbie, N. D., Pöckl, M., Weisse, T. 2003 Rapid establishment of clonal isolates of freshwater picoplankton by single-cell and single-colony sorting. J. Microbiol. Methods, 55, 361-370.
Keywords: cell culture; eukaryotic autotrophic picoplankton; flow cytometry; phycocyanin; phycoerythrin; Synechococcus
Strain(s): 13411342134313441345134613471348 
Cunningham, Jr., F. X., Lee, H., Gantt, E. 2007 Carotenoid biosynthesis in the primitive red alga Cyanidioschyzon merolae. Eukaryot. Cell, 6, 533-545.
Strain(s): 13323377 
Danbara, A., Shiraiwa, Y. 1999 The requirement of selenium for the growth of marine coccolithophorids, Emiliania huxleyi, Gephyrocapsa oceanica and Helladosphaera sp. (Prymnesiophyceae). Plant Cell Physiol, 40, 762-766.
Keywords: artificial seawater; coccolithophorids; Emiliania huxleyi; Gephyrocapsa oceanica; Helladosphaera; selenium-depletion; selenium-requirement
Strain(s): 837838 
De Halperin, D. R., Mendoza, M. L., De Caire, G. Z. 1973 Axenic cultures of blue-green algae (Cyanophyta). Physis secc. B. Buenos Aires., 32, 67-84 (in Spanish with English summary).
Strain(s): 37 
Decelle, J., Romac, S., Stern, R. F., Bendif, E., Zingone, A., Audic, S., Guiry, M. D., Guillou, L., Tessier, D., Le Gall, F., Gourvil, P., Dos Santos, A. L., Probert, I., Vaulot, D., de Vargas, C., Christen, R. 2015 PhytoREF: a reference database of the plastidial 16S rRNAgene of photosynthetic eukaryotes with curated taxonomy. Mol. Ecol. Resour., 15, 1435-1445.
Keywords: high-throughput sequencing; metabarcoding; photosynthesis; phytoplankton; plastidial 16S rRNA gene; protists
Strain(s): 763 
DOI: 10.1111/1755-0998.12401
del Campo, J., Sieracki, M.E., Molestina, R., Keeling, P., Massana, R., Ruiz-Trillo, I. 2014 The others: our biased perspective of eukaryotic genomes. Trends Ecol. Evol., 29, 252-259.
Strain(s): 1000258225842587259026732693269426952696269727002751275527582761336933703371 
PubMed: 24726347
DOI: 10.1016/j.tree.2014.03.006
Demura, M., Kawachi, M., Kunugi, M., Nishizawa, T., Kasai, F., Watanabe, M. M. 2007 Development of microsatellite markers for the red tide-forming harmful species Chattonella antiqua, C. marina, and C. ovata (Raphidophyceae). Mol. Ecol. Notes, 7, 315-317.
Keywords: Chattonella; harmful algal bloom; microsatellite; phytoplankton; Raphidophyceae; red tide
Strain(s): 2 
DOI: 10.1111/j.1471-8286.2006.01592.x
Demura, M., Nakayama, T., Kasai, F., Kawachi, M. 2014 Genetic structure of Japanese Chattonella marina (Raphidophyceae) populations revealed using microsatellite markers. Phycol. Res., 62, 102-108.
Keywords: Chattonella marina var. antiqua; Chattonella marina var. marina; genetic structure; isolation by distance; microsatellite marker; population genetics
Strain(s): 12383848511311411511616155723832384238523862387238823892390239123922393239423952396239723982399240024012402240324042405240624072509251025112512251325142515251625172518 
DOI: 10.1111/pre.12047
Denboh, T., Hendrayanti, D., Ichimura, T. 2001 Monophyly of the genus Closterium and the order Desmidiales (Charophyceae, Chlorophyta) inferred from nuclear small subunit rDNA data. J. Phycol., 37, 1063-1072.
Keywords: Charophyceae; Closterium; desmid; molecular phylogeny; placoderm; SSU rDNA; Zygnematales
Strain(s): 52170174175180181185187188191194198199200271339449 
DOI: 10.1046/j.1529-8817.2001.00146.x
Denboh, T., Ichimura, T., Hendrayanti, D., Coleman, A. W. 2003 Closterium moniliferum-ehrenbergii (Charophyceae, Chlorophyta) species complex viewed from the 1506 Group I intron and ITS2 of nuclear rDNA. J. Phycol., 39, 960-977.
Keywords: biological species; Closterium; group I introns; ITS2; mating group; molecular phylogeny; speciation
Strain(s): 172173174182183228229 
Dimier, C., Giovanni, S., Ferdinando, T., Brunet, C. 2009 Comparative ecophysiology of the xanthophyll cycle in six marine phytoplanktonic species. Protist, 160, 397-411.
Keywords: diatoxanthin; photoprotection; phytoplankton; picoplankton; pigments; xanthophyll cycle
Strain(s): 2687 
PubMed: 19375387
DOI: 10.1016/j.protis.2009.03.001
Dimier, C., Giovanni, S., Ferdinando, T., Brunet, C. 2009 Growth and photoregulation dynamics of the picoeukaryote Pelagomonas calceolata in fluctuating light. Limnol. Oceanogr., 54, 823-836.
Strain(s): 2690 
Dionisio, M. L., Tsuzuki, M., Miyachi, S. 1989 Blue light induction of carbonic anhydrase activity in Chlamydomonas reinhardtii. Plant Cell Physiol., 30, 215-219.
Keywords: blue light; carbonic anhydrase; Chlamydomonas reinhardtii; enzyme induction; photoreceptor
Strain(s): 2235 
Dionisio, M. L., Tsuzuki, M., Miyachi, S. 1989 Light requirement for carbonic anhydrase induction in Chlamydomonas reinhardtii. Plant Cell Physiol., 30, 207-213.
Keywords: blue light; carbonic anhydrase; Chlamydomonas reinhardtii; enzyme induction; light intensity
Strain(s): 2235 
Dionisio-Sese, M. L., Fukuzawa, H., Miyachi, S. 1990 Light-induced carbonic anhydrase expression in Chlamydomonas reinhardtii. Plant Physiol., 94, 1103-1110.
Strain(s): 2235 
DOI: 10.1104/pp.94.3.1103
Dionisio-Sese, M. L., Miyachi, S. 1992 The effect of sodium chloride on carbonic anhydrase activity in marine microalgae. J. Phycol., 28, 619-624.
Keywords: carbonic anhydrase; Cl- activation; Cl- inhibition; marine microalgae; NaCl effect; photosynthesis
Strain(s): 2168 
Domínguez-Bocanegra, A. R., Legarreta, I. G., Jeronimo, F. M. 2004 Influence of environmental and nutritional factors in the production of astaxanthin from Haematococcus pluvialis. Biores. Technol., 92, 209-214.
Keywords: Haematococcus; Astaxanthin production; Light intensity; Aeration
Strain(s): 144 
Domínguez-Bocanegra, A. R., Ponce-Noyola, T., Torres-Muñoz, J. A. 2007 Astaxanthin production by Phaffia rhodozyma and Haematococcus pluvialis: a comparative study. Appl. Microbiol. Biotechnol., 75, 783-791.
Keywords: Haematococcus pluvialis; Phaffia rhodozyma; Astaxanthin synthesis; Coconut milk
Strain(s): 144 
Donia, M. S., Schmidt, E. W. 2011 Linking chemistry and genetics in the growing cyanobactin natural products family. Chem. Biol., 18, 508-519.
Strain(s): 596 
DOI: 10.1016/j.chembiol.2011.01.019
Du, HW., Yang, LY., Wu, J., Xiao, L., Wang, XL., Jiang, LJ. 2012 Simultaneous removal of phosphorus and nitrogen in a sequencing batch biofilm reactor with transgenic bacteria expressing polyphosphate kinase. Appl. Microbiol. Biotechnol., 96, 265-272.
Keywords: Poly-phosphate kinase gene; Pseudomonas putida; Sequencing batch biofilm reactor; Phosphorus removal; Nitrogen removal
Strain(s): 843 
PubMed: 22218771
DOI: 10.1007/s00253-011-3839-5
Dwi, S., Hirata, K., Asada, Y., Miyamoto, K. 2001 Utilization of cyanobacterial biomass from water bloom for bioproduction of lactic acid. World J. Microbiol. Biotech., 17, 259-264.
Keywords: cyanobacterium; CO2 supplementation; lactic acid; Lactobacillus agilis; L. amylovorus; L. ruminis; starch; water bloom
Strain(s): 2344 
Ehara, M., Watanabe, K. I., Kawai, H., Inagaki, Y., Hayashi-Ishimaru, Y., Ohama, T. 1998 Distribution of the mitochondrial deviant genetic code AUA for methionine in heterokont algae. J. Phycol., 34, 1005-1008.
Keywords: cytochrome oxydase subunit I; deviant genetic code; heterokont algae; Phaeophyceae; Xanthophyceae
Strain(s): 1 
DOI: 10.1046/j.1529-8817.1998.341005.x
Ehara, T., Ogasawara, Y., Osafune, T. 1990 Behavior of chloroplast nucleoids during the cell cycle of Chlamydomonas reinhardtii (Chlorophyta) in synchronized culture. J. Phycol., 26, 317-323.
Keywords: cell cycle; Chlamydomons; chloroplast division; DAPI; nucleoid
Strain(s): 2235 
Ehara, T., Osafune, T., Hase, E. 1985 Interactions between the nucleus and cytoplasmic organelles durihg the cell cycle of Euglena gracilis in synchronized cultures. III. Associations between the nucleus and chloroplasts at an early stage of the cell cycle under photoorganotrophic conditions (part II). Plant Cell Physiol., 26, 1155-1165.
Keywords: cell cycle; chloroplast-nucleus association; chloroplast-nucleoid; Euglena gracilis; three-dimensional chloroplast model
Strain(s): 48 
Ehara, T., Osafune, T., Hase, E. 1990 Interactions between the nucleus and cytoplasmic organelles during the cell cycle of Euglena gracilis in synchronized cultures. Exp. Cell Res., 190, 104-112.
Strain(s): 48 
Ehara, T., Shihira-Ishikawa, I., Osafune, T., Hase, E., Ohkuro, I. 1975 Some structural characteristics of chloroplast degeneration in cells of Euglena gracilis Z during their heterotrophic growth in darkness. J. Electron Microscopy, 24, 253-261.
Strain(s): 48 
Ehara, T., Sumida, S., Osafune, T. 1988 Dynamic morphological changes of organelles in Euglena gracilis Z. J. Tokyo Med. Coll., 46, 420-431.
Strain(s): 48 
Ehara, T., Sumida, S., Osafune, T., Hase, E. 1984 Interactions between the nucleus and cytoplasmic organelles during the cell cycle of Euglena gracilis in cynchronized culture. I. Associations between the nucleus and chloroplasts at an early stage in the cell cycle under photoorganotrophic conditions (Part I). Plant Cell Physiol., 25, 1133-1146.
Keywords: cell cycle; chloroplast-nucleus association; chloroplast-nucleoid; chromosome; Euglena gracilis
Strain(s): 48 
Eikrem, W., Romari, K., Latasa, M., Le Gall, F., Throndsen, J., Vaulot, D. 2004 Florenciella parvula gen. et sp. nov. ((Dictyochophyceae, Heterokontophyta), a small flagellate isolated from the English Channel. Phycologia, 43, 658-668.
Strain(s): 2684 
Eliáš, M. Neustupa, J. 2009 Pseudomarvania, gen. nov. (Chlorophyta, Trebouxiophyceae). a new genus for "budding" subaerial green algae Marvania aerophytica Neustupa et Šejnohová and Stichococcus ampulliformis Handa. Fottea, 9, 169-177.
Keywords: evolution; Marvania; Stichococcus; phylogeny; Trebouxiophyceae; 18S rRNA
Strain(s): 996 
Endo, B., Fujii, T., Kamiya, Y., Sekimoto, H. 1997 Analysis of genomic sequences encoding a sex pheromone from the Closterium peracerosum-strigosum-littorale complex. J. Plant Res., 110, 463-467.
Keywords: cis-element; Closterium; genomic DNA; protoplast-release- inducing protein (PR-IP); sex pheromone; transcription
Strain(s): 67 
Erata, M., Chihara, M. 1987 Cryptomonads from the Sugadaira-Moor, Central Japan. Bull. Sugadaira Mont. Res. Center, Univ. Tsukuba, 8, 57-69 (in Japanese with English summary).
Strain(s): 715 
Erata, M., Chihara, M. 1989 Re-examination of Pyrenomonas and Rhodomonas (Class Cryptophyceae) through ultrastructural survey of red pigmented cryptomonads. Bot. Mag. Tokyo, 102, 429-443.
Keywords: nucleomorph; periplastidal compartment; Pyrenomonas; Rhodomonas
Strain(s): 697698699700701702705 
Erata, M., Chihara, M. 1991 Cryptomonads of Japan (2) three species of Chroomonas. J. Jpn. Bot., 66, 7-11.
Strain(s): 707709710727 
Erata, M., Kubota, M., Takahashi, T., Inouye, I., Watanabe, M. 1995 Ultrastructure and phototactic action spectra of two genera of cryptophyte flagellate algae, Cryptomonas and Chroomonas. Protoplasma, 188, 258-266.
Keywords: action spectrum; Chroomonas; Cryptomonas; cryptophyte; eyespot; phototaxis; phycobilin
Strain(s): 707 
Erhard, M., von Döhren, H., Jungblut, P. 1997 Rapid typing and elucidation of new secondary metabolites of intact cyanobacteria using MALDI-TOF mass spectrometry. Nat. Biotechnol., 15, 906-909.
Keywords: cyanobacteria; secondary metabolites; MALD-TOF; PSD; microcystin; anabaenopeptolins
Strain(s): 90 
PubMed: 9306409
DOI: 10.1038/nbt0997-906
Faria, D. G., Kato, A., de la Peña, M., Suda, S. 2011 Taxonomy and phylogeny of Nephroselmis clavistella sp. nov. (Nephroselmidophyceae, Chlorophyta). J. Phycol., 6, 1388-1396.
Keywords: molecular phylogeny; morphology; Nephroselmidophyceae; Nephroselmis clavistella sp. nov.; scale morphology; taxonomy; ultrastructure
Strain(s): 2867 
Fawley, M. W. 1991 Disjunct distribution of the xanthophyll loroxanthin in the green algae (Chlorophyta). J. Phycol., 27, 544-548.
Keywords: carotenoids; Chlorophyta; high-performance liquid chromatography; loroxanthin; xanthophylls
Strain(s): 2285 
Feinstein, T. N., Traslavina, R., Sun, M.-Y., Lin, S. 2002 Effects of light on photosynthesis, grazing, and population dynamics of the heterotrophic dinoflagellate Pfiesteria piscicida (Dinophyceae). J. Phycol., 38, 659-669.
Keywords: cannibalism; grazing; growth; kleptoplastidy; light; Pfiesteria piscicida
Strain(s): 1730 
Foy, R. H., Gibson, C. E. 1982 Photosynthetic characteristics of planktonic blue-green algae: the response of twenty strains grown under high and low light. Br. Phycol. J., 17, 169-182.
Strain(s): 596 
Fujii, K. 2012 Process integration of supercritical carbon dioxide extraction and acid treatment for astaxanthin extraction from a vegetative microalga. Food Bioprod. Process., 90, 762-766.
Keywords: Supercritical carbon dioxide; Microalgae; Monoraphidium sp.; Astaxanthin; Chlorophyll
Strain(s): 2267 
DOI: 10.1016/j.fbp.2012.01.006
Fujii, K., Imazato, E., Nakashima, H., Ooi, O., Saeki, A. 2006 Isolation of the non-fastidious microalga with astaxanthin-accumulating property and its potential for application to aquaculture. Aquaculture, 261, 285-293.
Keywords: Astaxanthin; Aquaculture; Microalgae; Monoraphidium
Strain(s): 2267 
Fujii, K., Matsunobu, S., Takahashi, Y. 2014 Characterization of the new microalgal strains, Oogamochlamys spp., and their potential for biofuel production. Algal Research, 5, 164-170.
Keywords: Lipid; Biofuel; Microalgae; Oogamochlamys
Strain(s): 3643 
DOI: 10.1016/j.algal.2014.08.003
Fujii, K., Nakajima, H, Anno, Y. 2008 Potential of Monoraphidium sp. GK12 for energy-saving astazanthin production. J. Chem. Tech. Biotechnol., 83, 1578-1584.
Keywords: astaxanthin; microalgae; Monoraphidium sp.; outdoor cultivation; energy-saving technology
Strain(s): 2267 
Fujii, K., Nakashima, H., Hashidzume, Y. 2010 Isolation of folate-producing microalgae, from oligotrophic ponds in Yamaguchi, Japan. J. Appl. Microbiol., 108, 1421-1429.
Keywords: B-vitamins; Chlamydomonas; Chlorococcum; folate; microalgae; thiamine
Strain(s): 217222352848284928502851 
Fujii, K., Nakashima, H., Hashidzume, Y., Uchiyama, T., Mishiro, K., Kadota, Y. 2010 Potential use of the astaxanthin-producing microalga, Monoraphidium sp. GK12, as a functional aquafeed for prawns. J. Appl. Phycol., 22, 363-369.
Keywords: Astaxanthin; Vitamin; Unsaturated fatty acid; Microalgae; Monoraphidium; Functional aquafeed
Strain(s): 2267 
DOI: 10.1007/s10811-009-9468-z
Fujii, K., Yahashi, Y., Nakano, T., Imanishi, S., Baldia, S. F., Harada, K. 2002 Simultaneous detection and determination of the absolute configuration of thiazole-containing amino acids in a peptide. Tetrahedron, 58, 6873-6879.
Keywords: microcyclamide; absolute configuration; advanced Marfey's method; thiazole-containing (TZL-) amino acid
Strain(s): 298 
Fujii, M., Sato, Y., Ito, H., Masago, Y., Omura, T. 2012 Monosaccharide composition of the outer membrane lipopolysaccharide and O-chain from the freshwater cyanobacterium Microcystis aeruginosa NIES-87. J. Appl. Microbiol., 113, 896-903.
Keywords: chemical characterization, lipopolysaccharide, Microcystis aeruginosa, O-chain
Strain(s): 87 
Fujisawa, T., Narikawa, R., Okamoto, S., Ehira, S., Yoshimura, H., Suzuki, I., Masuda, T., Mochimaru, M., Takaichi, S., Awai, K., Sekine, M., Horikawa, H., Yashiro, I., Omata, S., Takarada, H., Katano, Y., Kosugi, H., Tanikawa, S., Ohmori, K., Sato, N.,Ikeuchi, M., Fujita, N., Ohmori, M. 2010 Genomic structure of an economically important cyanobacterium, Arthrospira (Spirulina) platensis NIES-39. DNA Res., 17, 85-103.
Keywords: cyanobacteria; Arthrospira; health supplement; genome; cAMP
Strain(s): 39 
DOI: 10.1093/dnares/dsq004
Fujise, D., Tsuji, K., Fukushima, N., Kawai, K., Harada, K. 2010 Analytical aspects of cyanobacterial volatile organic compounds for investigation of their production behavior. J. Chromatogr. A, 1217, 6122-6125.
Keywords: Cyanobacteria; Volatile organic compounds; Analysis; b-Cyclocitral; 2-Methyl-1-butanol; 3-Methyl-1-butanol; SPME
Strain(s): 87298 
DOI: 10.1016/j.chroma.2010.07.008
Fujita, K. 1958 The metabolism of acetate in Chlorella cells. J. Biochem., 46, 253-268.
Strain(s): 2170 
Fujita, Y. 1974 The light-induced oxidation-reduction reaction of cytochrome b-559 in membrane fragments of the blue-green alga Anabaena variabilis. Plant Cell Physiol., 15, 861-874.
Strain(s): 23 
DOI: 10.1093/oxfordjournals.pcp.a075075
Fujita, Y. 1975 Further investigation of the light-induced cytochrome b-559 reaction in membrane fragments of the blue-green alga Anabaena variabilis. Plant Cell Physiol., 16, 1037-1048.
Strain(s): 23 
DOI: 10.1093/oxfordjournals.pcp.a075223
Fujita, Y. 1976 The C550 photoresponse at room temperature observed in membrane fragments of the blue-green alga Anabaena variabilis. Plant Cell Physiol., 17, 187-191.
Strain(s): 23 
Fujita, Y., Hattori, A. 1960 Effect of chromatic lights on phycobilin formation in a blue-green alga, Tolypothrix tenuis. Plant Cell Physiol., 1, 293-303.
Strain(s): 37 
Fujita, Y., Hattori, A. 1960 Formation of phycoerythrin in pre-illuminated cells of Tolypothrix tenuis with special reference to nitrogen metabolism. Plant Cell Physiol., 1, 281-292.
Strain(s): 37 
Fujita, Y., Hattori, A. 1962 Changes in composition of cellular material during formation of phycobilin chromoproteids in a blue-green alga, Tolypothrix tenuis. J. Biochem., 52, 38-42.
Strain(s): 37 
Fujita, Y., Hattori, A. 1962 Photochemical interconversion between precursors of phycobilin chromoproteids in Tolypothrix tenuis. Plant Cell Physiol., 3, 209-220.
Strain(s): 37 
Fujita, Y., Hattori, A. 1962 Preliminary note on a new phycobilin pigment isolated from blue-green algae. J. Biochem., 51, 89-91.
Strain(s): 1937 
Fujita, Y., Hattori, A. 1963 Action spectrum of light-induced nitrite reduction in Anabaena cylindrica. J. Gen. Appl. Microbiol., 9, 257-265.
Strain(s): 19 
Fujita, Y., Hattori, A. 1963 Effects of second chromatic illumination on phycobilin chromo-protein formation in chromatically preillumi-nated cells of Tolypothrix tenuis. Plant Cell Physiol., Spec. Iss. (Studies on Microalgae and Photosynthetic Bacteria), 431-440.
Strain(s): 37 
Fujita, Y., Hattori, A. 1963 Occurrence of a purple bile pigment in phycoerythrin-rich cells of the blue-green alga, Tolypothrix tenuis. J. Gen. Appl. Microbiol., 9, 253-256.
Strain(s): 37 
Fujita, Y., Murano, F. 1967 Photochemical activities of sonicated lamellae of spinach chloroplasts with special reference to the action of CRS (cytochrome c reducing substance). Plant Cell Physiol., 8, 269-281.
Strain(s): 19 
Fujita, Y., Murano, F. 1968 Occurrence of back flow of electrons against the action of photochemical system I in sonicated lamellar fragments. In Comparative Biochemistry and Biophysics of Photosynthesis, Eds. by Shibata, K., et al., University of Tokyo Press, Tokyo, p. 161-169.
Strain(s): 19 
Fujita, Y., Myers, J. 1966 Some properties of the cytochrome C reducing substance, a factor for light-induced redox reaction of cytochrome C in photosynthetic lamellae. Plant Cell Physiol., 7, 599-606.
Strain(s): 19 
Fujita, Y., Ohama, H., Hattori, A. 1964 Hydrogenase activity of cell-free preparation obtained from the blue-green alga, Anabaena cylindrica. Plant Cell Physiol., 5, 305-314.
Strain(s): 19 
Fujita, Y., Pjon, C.-J., Suzuki, R. 1974 Studies on the Hill reaction of membrane fragments of blue-green algae V. A correlation between the solubilization of a photochemically active chromoprotein (ACP) and the inactivation of photosystem II activity in membrane fragments of Anabaena cylindrica. Plant Cell Physiol., 15, 779-787.
Strain(s): 19 
Fujita, Y., Suzuki, R. 1971 Studies on the Hill reaction of membrane fragments of blue-green algae I. Stabilizing effect of various media on the 2,6-dichlorophenol indophenol-Hill activity of membrane fragments obtained from Anabaena cylindrica and Anabaena variabilis. Plant Cell Physiol., 12, 641-651.
Strain(s): 1923 
Fujita, Y., Suzuki, R. 1973 Studies on the Hill reaction of membrane fragments of blue-green algae III. Fluorescence characteristics of membrane fragments of Anabaena variabilis and Anabaena cylindrica. Plant Cell Physiol., 14, 249-260.
Strain(s): 1923 
Fujita, Y., Suzuki, R. 1973 Studies on the Hill reaction of membrane fragments of blue-green algae IV. Carotenoid photobleaching induced by photosystem II action. Plant Cell Physiol., 14, 261-273.
Strain(s): 1923 
Fujita, Y., Tsuji, T. 1968 Photochemically active chromoprotein isolated from the blue-green alga Anabaena cylindrica. Nature, 219, 1270-1271.
Strain(s): 19 
PubMed: 5677430
DOI: 10.1038/2191270a0
Fujiwara, S., Fukuzawa, H., Tachiki, A., Miyachi, S. 1990 Structure and differential expression of two genes encoding carbonic anhydrase in Chlamydomonas reinhardtii. Proc. Nati. Acad. Sci. U. S. A., 87, 9779-9783.
Strain(s): 2235 
Fujiwara, T., Kanesaki, Y., Hirooka, S., Era, A., Sumiya, N., Yoshikawa, H., Tanaka, K., Miyagishima, S. 2015 A nitrogen source-dependent inducible and repressible gene expression system in the red alga Cyanidioschyzon merolae. Front. Plant Sci., 6, 657 (article ID).
Keywords: algae; plants; homologous recombination; conditional knockdown; gene inducible system
Strain(s): 3377 
DOI: 10.3389/fpls.2015.00657
Fujiwara, T., Kuroiwa, H., Yagisawa, F., Ohnuma, M., Yoshida, Y., Yoshida, M., Nishida, K., Misumi, O., Watanabe, S., Tanaka, K., Kuroiwa, T. 2010 The coiled-coil protein VIG1 is essential for tethering vacuoles to mitochondria during vacuole inheritance of Cyanidioschyzon merolae. Plant Cell, 22, 772-781.
Strain(s): 3377 
PubMed: 20348431
DOI: 10.1105/tpc.109.070227
Fujiwara, T., Misumi, O., Tashiro, K., Yoshida, Y., Nishida, K., Yagisawa, F., Imamura, S., Yoshida, M., Mori, T., Tanaka, K., Kuroiwa, T. 2009 Peirodic gene expression patterns du9iring the highly synchronized cell nucleus and organelle division cycles in the unicellular red alga Cyanidioschyzon merolae. DNA Res., 16, 59-72.
Keywords: cell cycle; microarray; mitochondria-plastid division genes; organelle division genes; Cyanidioschyzon merolae
Strain(s): 3377 
Fukuda, S., Iwamoto, K., Atsumi, M., Yokoyama, A., Nakayama, T., Ishida, K-I., Inouye, I., Shiraiwa, Y. 2014 Global searches for microalgae and aquatic plants that can eliminate radioactive cesium, iodine and strontium from the radio-polluted aquatic environment: a bioremediation strategy. J. Plant Res., 127, 79-89.
Keywords: Algal phytoremediation; Bioaccumulation; Radiopollution; Radionuclide elimination; Radioactive cesium; The Fukushima 1 Nuclear Power Plant accident
Strain(s): 24367115516020324632940541748750352953153855358759767872780584385993110031012101710311044104512591326137713821388141114351439144014411442145817281826183118331840184618621865195621312146214721502175218522682325234123522377241124122437285428552856285828592860 
DOI: 10.1016/10.1007/s10265-013-0596-9
Fukuda, S., Suzuki, I., Hama, T., Shiraiwa, Y. 2011 Compensatory response of the unicellular-calcifying alga Emiliania huxleyi (Coccolithophoridales, Haptophyta) to ocean acidification. J. Oceanogr., 67, 17-25.
Keywords: Alkalization; Calcification; Coccolithophorid; Emiliania huxleyi; Inorganic carbon; Ocean acidification; pH change; pH effect; Photosynthesis; Respriration
Strain(s): 837 
Fukuda, S., Suzuki, Y., Shiraiwa, Y. 2014 Difference in physiological responses of growth, photosynthesis and calcification of the coccolithophore Emiliania huxleyi to acidification by acid and CO2 enrichment. Photosynth. Res., 121, 299-309.
Keywords: Acidification; CO2 enrichment; Calcification; Emiliania huxleyi; pH effect; Photosynthesis
Strain(s): 837 
DOI: 10.1007/s11120-014-9976-9
Fukumoto, R., Dohmae, N., Takio, K., Satoh, S., Fujii, T., Sekimoto, H. 2002 Purification and characterization of a pheromone that induces sexual cell division in the unicellular green alga Closterium ehrenbergii. Plant Physiol. Biochem., 40, 183-188.
Keywords: Closterium ehrenbergii; pheromone; sexual reproduction
Strain(s): 228229 
Fukumoto, R., Fujii, T., Sekimoto, H. 1997 Detection and evaluation of a novel sexual pheromone that induces sexual cell division of Closterium ehrenbergii (Chlorophyta). J. Phycol., 33, 441-445.
Keywords: Chlorophyta; Closterium ehrenbergii; conjugation; gametogenesis; gamete; pheromone; protoplast-release-inducing protein; sexual cell division
Strain(s): 228229 
Fukumoto, R., Fujii, T., Sekimoto, H. 1998 A newly identified chemotactic sexual pheromone from Closterium ehrenbergii. Sex. Plant Reprod., 11, 81-85.
Keywords: Closterium ehrenbergii; chemoattractant; conjugation; sexual pheromone; protoplast-release inducing protein
Strain(s): 228229 
Fukumoto, R., Fujii, T., Sekimoto, H. 2003 Cloning of a cDNA encoding a sexual cell division-inducing pheromone from a unicellular green alga Closterium ehrenbergii. J. Phycol., 39, 931-936.
Keywords: Closterium; conjugation; pheromone; sexual reproduction; RACE-PCR
Strain(s): 228229 
Fukumoto, T., Nishimura, T., Nagasawa, T., Kitajima, K., Iwamura, T. 1988 Exclusion chromatography with controlled-pore glass beads to isolate Chlorella chromatin and its applications. Anal. Biochem., 170, 463-471.
Strain(s): 2170 
Fukuzawa, H., Fujiwara, S., Yamamoto, Y., Dionisio-Sese, M. L., Miyachi, S. 1990 cDNA cloning, sequence, and expression of carbonic anhydrase in Chlamydomonas reinhardtii: Regulation by environmental CO2 concentration. Proc. Nati. Acad. Sci. U. S. A., 87, 4383-4387.
Strain(s): 2235 
Fukuzawa, H., Ishida, S., Miyachi, S. 1991 cDNA cloning and gene expression of carbonic anhydrase in Chlamydomonas reinhardtii. Can. J. Bot., 69, 1088-1096.
Keywords: photosynthesis; light regulation; zinc; CO2-concentrating mechanism; intracellular processing
Strain(s): 2235 
Fuller, N. J., Campbell, C., Allen, D. J., Pitt, F. D., Le Gall, F., Vaulot, D., Scanlan, D. J. 2006 Analysis of photosynthetic picoeukaryote diversity at open ocean sites in the Arabian Sea using a PCR biased towards marine algal plastids. Aquat. Microb. Ecol., 43, 79-93.
Keywords: Photosynthetic picoeukaryotes; Plastid 16S rRNA; Arabian Sea; PCR
Strain(s): 25862588258926722673268726902693 
Furihata, T., Pomprasirt, S., Sakurai, H. 1997 Characteristics of sulfite transport by Chlorella vulgaris. Plant Cell Physiol., 38, 398-403.
Keywords: Chlorella; plasma membrane; sulfite; transport
Strain(s): 2160 
Furusato, E., Asaeda, T., Manatunge, J. 2004 Tolerance for prolonged darkness of three phytoplankton species, Microcystis aeruginosa (Cyanophyceae), Scenedesmus quadricauda (Chlorophyceae), and Melosira ambigua (Bacillariophyceae). Hydrobiologia, 527, 153-162.
Keywords: algal bloom; artificial circulation; community succession; darkness tolerance; phytoplankton
Strain(s): 298 
Gaget, V., Welker, M., Rippka, R., de Marsac, N. T. 2015 A polyphasic approach leading to the revision of the genus Planktothrix (Cyanobacteria) and its type species, P. agardhii, and proposal for integrating the emended valid botanical taxa, as well as three new species, Planktothrix paucivesiculata sp. nov.ICNP, Planktothrix tepida sp. nov.ICNP, Planktothrix serta sp. nov.ICNP, as genus and species names with nomenclatural standing under th ICNP. Syst. Appl. Microbiol., 38, 141-158.
Keywords: Polyphasic taxonomy; 16S rRNA gene; ITS; MLST; gyrB; rpoB; rpoC1; Planktothrix Anagnostidis & Komárek 1988ICN emend. gen. nov. ICNP
Strain(s): 9059281266 
DOI: 10.1016/j.syapm.2015.02.004
Gekeler, W., Grill, E., Winnacker, E.-L., Zenk, M. H. 1988 Algae sequester heavy metals via synthesis of phytochelatin complexes. Arch. Mikrobiol., 150, 197-202.
Strain(s): 687 
Gile, G. H., Stern, R. F., James, E. R., Keeling, P. J. 2010 DNA barcoding of chlorarachniophytes using nucleomorph its sequences. J. Phycol., 46, 743-750.
Keywords: Bigelowiella; Chlorarachnion; culture collections; Gymnochlora; internal transcribed spacer; Lotharella; Norrisiella; Partenskyella
Strain(s): 62425842677 
Giovagnetti, V., Cataldo, M. L., Conversano, F., Brunet, C. 2010 Functional relation between growth, photosynthetic rate and regulation in the coastal picoeukaryote Phaeomonas sp. RCC 503 (Pinguiophyceae, Stramenopiles). J. Plankton Res., 32, 1501-1511.
Keywords: photoacclimation; picoeukaryote; xanthophyll cycle
Strain(s): 2693 
Gontcharov, A. A., Marin, B., Melkonian, M. 2003 Molecular phylogeny of conjugating green algae (Zygnemophyceae, Streptophyta) inferred from SSU rDNA sequence comparisons. J. Mol. Evol., 56, 89-104.
Keywords: Green algae; Streptophyta; Zygnemophyceae; Desmids; Molecular phylogeny; SSU rDNA
Strain(s): 309 
Gontcharov, A. A., Watanabe, M. M. 1999 Rare and new desmids (Desmidaceae, Chlorophyta) from Japan. Phycol. Res., 47, 233-240.
Keywords: desmids; new findings; new species; Japan
Strain(s): 839840841842 
Grauvogel, C., Petersen, J. 2007 Isoprenoid biosynthesis authenticates the classification of the green alga Mesostigma viride as an ancient streptophyte. Gene, 396(1), 125-133.
Keywords: evolution; primer design; cytosolic MVA pathway; plastid MEP pathway; Chlorophyta; Plantae; Cyanophora paradoxa
Strain(s): 476 
Grewe, C., Griehl, C. 2008 Time- and media-dependent secondary carotenoid accumulation in Haematococcus pluvialis. Biotechnol. J., 3, 1232-1244.
Keywords: Astaxanthin; Carotenoid biosynthesis; ; Haematococcus pluvialis; LC-MS; Media
Strain(s): 144 
Grilli Caiola, M., Canini, A., Galiazzo, F., Rotilio, G. 1991 Superoxide dismutase in vegetative cells, heterocysts and akinetes of Anabaena cylindrica Lemm. FEMS Microbiol. Lett., 80, 161-166.
Keywords: Anabaena cylindrica; superoxide dismutase; heterocyst; nitrogenase activity
Strain(s): 19 
Grotjohann, N., Kowallik, W. 1989 Influence of blue light on the activity of phosphofructokinase in Chlorella kessleri. Physiol. Plant., 75, 43-46.
Keywords: blue/UV-photoreceptor; Chlorella kessleri; phosphofructokinase
Strain(s): 2160 
Gugger, M., Lyra, C., Henriksen, P., Coute, A., Humbert, J.-F., Sivonen, K. 2002 Phylogenetic comparison of the cyanobacterial genera Anabena and Aphanizomenon. Int. J. Syst. Evol. Microbiol., 52, 1867-1880.
Keywords: Anabaena; Aphanizomenon; 16S rDNA; 16S-23S rDNA; RubisCO spacer
Strain(s): 81 
Guidi-Rontani, C., Maheswari, U., Jabbari, K., Bowler, C. 2010 Comparative ecophysiology and genomics of the toxic unicellular alga Fibrocapsa japonica. New Phytol., 185, 446-458.
Keywords: expressed sequence tags (ESTs); Fibrocapsa japonica; harmful algal blooms; heterokont; phylogeny; raphidophyte; stramenopile; toxicity
Strain(s): 4625606051303 
DOI: 10.1111/j.1469-8137.2009.03074.x
Guillou, L. 2011 Characterization of the Parmales: much more than the resolution of a taxonomic enigma. J. Phycol., 47, 2-4.
Strain(s): 2682 
Guillou, L., Chrétiennot-Dinet, M. J., Boulben, S., Moon-van der Staay, S. Y., Vaulot, D. 1999 Symbiomonas scintillans gen. et sp. nov. and Picophagus flagellatus gen. et sp. nov. (Heterokonta): two new heterotrophic flagellates of picoplanktonic size. Protist, 150, 383-398.
Strain(s): 25862589 
DOI: 10.1016/S1434-4610(99)70040-4
Guillou, L., Chrétiennot-Dinet, M. J., Medlin, L. K., Claustre, H., Loiseaux-de Goër, S., Vaulot, D. 1999 Bolidomonas: a new genus with two species belonging to a new algal class, the Bolidophyceae (Heterokonta). J. Phycol., 35, 368-381.
Keywords: Bolidophyceae; diatoms; Heterokonta; marine picoeukaryotes; oligotrophic ocean; Stramenopiles
Strain(s): 2682 
Guillou, L., Jacquet, S., Chrétiennot-Dinet, M. J., Vaulot, D. 2001 Grazing impact of two small heterotrophic flagellates on Prochlorococcus and Synechococcus. Aquat. Microb. Ecol., 26, 201-207.
Strain(s): 25862589 
Guillou, L., Moon-van der Staay, S. Y., Claustre, H., Partensky, F., Vaulot, D. 1999 Diversity and abundance of Bolidophyceae (Heterokonta) in two oceanic regions. Appl. Environ. Microbiol., 65, 4528-4536.
Strain(s): 2586258926822691 
Guo, B., Lei, C., Ito, T., Jiang, Y., Ozeki, Y., Goda, K. 2016 High-throughput accurate single-cell screening of Euglena gracilis with fluorescence-assisted optofluidic time-stretch microscopy. PLoS One, 11, e0166214 (article ID).
Strain(s): 48 
DOI: 10.1371/journal.pone.0166214
Ha, J. H., Hidaka, T., Tsuno, H. 2009 Quantification of toxic Microcystis and evolution of its dominance ratio in blooms using real-time PCR. Environ. Sci. Technol., 43, 812-818.
Strain(s): 102 
PubMed: 19245020
DOI: 10.1021/es801265f
Ha, K., Takamura, N., Jang, M.-H. 2009 Microcystin production by Microcystis aeruginosa exposed to phytoplanktivorous and omnivorous fish at different kairomone concentrations. Bull. Environ. Contam. Toxicol., 83, 761-765.
Keywords: microcystin; kairomone; Hypophthalmichthys molitrix; Carassius gibelio langsdorfi
Strain(s): 89107 
Hagino, K., Bendif, E. M., Young, J. R. Kogame, K., Probert, I., Takano, Y., Horiguchi, T., de Vardas, C., Okada, H. 2011 New evidence for morphological and genetic variation in the cosmopolitan coccolithophore Emiliania huxleyi (Prymnesiophyceae) from the COX1b-ATP4 genes. J. Phycol., 47, 1164-1176.
Keywords: biogeography; coccolithophore; Emiliania huxleyi; mitochondrial DNA; morphotype
Strain(s): 8378381311131213131314 
Hagiwara, T., Yagi, O., Takamura, Y., Sudo, R. 1984 Isolation of bacteria-free Microcystis aeruginosa from Lake Kasumigaura. Jpn. J. Water Poll. Res., 7, 437-442 (in Japanese with English summary).
Strain(s): 604 
Hamada, S., Sekimoto, H., Tanabe, Y., Tsuchikane, Y., Ito, M. 2006 Isolation of myosin XI genes from the Closterium peracerosum-strigosum-littorale complex and analysis of their expression during sexual reproduction. J. Plant Res., 119, 105-113.
Keywords: Closterium; Cytokinesis; Myosin XI; Real-time PCR; Sexual cell division; Sexual reproduction
Strain(s): 6567 
Hamaji, T., Ferris, J. P., Nishii, I., Nishimura, Y., Nozaki, H. 2013 Distribution of the sex-determining geneMID and molecular correspondence of mating types within the isogamous genus Gonium (Volvocales, Chlorophyta). PLoS One, 8, e64385 (article ID).
Strain(s): 652653655851852103924552457 
PubMed: 23696888
DOI: 10.1371/journal.pone.0064385
Hamaji, T., Mogi, Y., Ferris, P. J., Mori, T., Miyagishima, S., Kabeya, Y., Nishimura, Y., Toyoda, A., Noguchi, H., Fujiyama, A., Olson, B. J. S. C., Marriage, T. N., Nishii, I., Umen, J. G. Nozaki, H. 2016 Sequence of the Gonium pectorale mating locus reveals a complex and dynamic history of changes in volvocine algal mating haplotypes. G3-Genes Genomes Genet., 6, 1179-1189.
Keywords: Gonium; Chlamydomonas; Volvox; mating locus; evolution; Genetics of Sex
Strain(s): 2863 
DOI: 10.1534/g3.115.026229
Hamaji, T., Smith, DR., Noguchi, H., Toyoda, A., Suzuki, M., Kawai-Toyooka, H., Fujiyama, A., Nishii, I., Marriage, T., Olson, B. J. S. C., Nozaki, H. 2013 Mitochondrial and plastid genomes of the colonial green alga Gonium pectorale give insights into the origins of organelle DNA architecture within the Volvocales. PLoS One, 8, e57177 (article ID).
Strain(s): 2863 
PubMed: 23468928
DOI: 10.1371/journal.pone.0057177
Hamana, K. 2008 Cellular polyamines of phototrophs and beterotrophs belonging to the lower eukaryotic phyla Cercozoa, Euglenozoa, Heterokonta and Metamonada. J. Gen. Appl. Microbiol., 54, 135-140.
Keywords: cyanobacteria; homospermidine; polyamine; spermine; thermospermine
Strain(s): 915712533233306211002100310111044130314401444 
Hamana, K., Aizaki T., Arai, E., Saito, A., Uchikata, K., Ohnishi, H. 2004 Distribution of norspermidine s a cellular polyamine within micro green algae including non-photosynthetic achlorophyllous Polytoma, Polytomella, Prototheca and Helicosporidium. J. Gen. Appl. Microbiol., 50, 289-295.
Keywords: Chlorophyta; green alga; Helicosporidium; norspermidine; polyamine; Polytoma; Polytomella; Prototheca
Strain(s): 18251254255296329483486536 
Hamana, K., Furuchi, T., Hayashi, H., Niitsu, M. 2016 Additional analysis of cyanobacterial polyamines ─ Distributions of spermidine, homospermidine, spermine, and thermospermine within the phylum Cyanobacteria. ─ Microb. Resour. Syst., 32, 179-186.
Keywords: cyanobacteria; homospermidine; polyamine; thermospermine
Strain(s): 208620872134241225393373 
Hamana, K., Furuchi, T., Nakamura, T., Hayashi, H., Niitsu, M. 2016 Occurrence of penta-amines, hexa-amines and N-methylated polyamines in unicellular eukaryotic organisms belonging to the phyla Heterokontophyta and Labyrinthulomycota of the subdomain Stramenopiles. J. Gen. Appl. Microbiol., 62, 320-325.
Keywords: Bioaccumulation; clam Corbicula leana; cyanotoxins; elimination; Microcystis
Strain(s): 2535 
DOI: 10.2323/jgam.2016.05.001
Hamana, K., Kobayashi, M., Yokota, A., Sekiguchi, H., Niitsu, M. 2008 Cellular polyamine profiles in cyanobacteria. Microbiol. Cult. Coll., 24, 3-8.
Keywords: cyanobacteria; homospermidine; polyamine; spermine; thermospermine
Strain(s): 26333646206208230267268305361433434481507597598931932 
Hamana, K., Matsuzaki, S., Niitsu, M., Samejima, K., Nagashima, H. 1990 Polyamines of unicellular thermoacidophilic red alga Cyanidium caldarium. Phytochemistry, 29, 377-380.
Keywords: Cyanidium caldarium; Rhodophyta; red algae; polyamines; chemotaxonomy
Strain(s): 2137 
Hamana, K., Miyagawa, K., Matsuzaki, S. 1983 Occurrence of syn-homospermidine as the major polyamine in nitrogen-fixing cyanobacteria. Biochem. Biophys. Res. Commun., 112, 606-613.
Strain(s): 19373921293275 
Hamana, K., Niitsu, M. 2006 Cellular polyamines of lower eukaryotes belonging to the phyla Glaucophyta, Rhodophyta, Cryptophyta, Haptophyta and Percolozoa. J. Gen. Appl. Microbiol., 52, 235-240.
Keywords: Cryptophyta; Glaucophyta; Haptophyta; Perclozoa; polyamine; Rhodophyta
Strain(s): 27427627728235338869971574176310161017103210361332144114561457146214631467147315163377 
Hamana, K., Niitsu, M., Hayashi, H. 2013 Occurrence of homospermidine and thermospermine as a cellular polyamine in unicellular chlorophyte and multicellular charophyte green algae J. Gen. Appl. Micobiol., 59, 313-319.
Keywords: green alga; homospermidine; polyamine; thermospermine
Strain(s): 181511602552963063603636408361409141014111419183721993374 
Hamana, K., Sakamoto, A., Nishina, M., Niitsu, M. 2004 Cellular polyamine profile of the phyla Dinophyta, Apicomplexa, Ciliophora, Euglenozoa, Cercozoa and Heterokonta. J. Gen. Appl. Microbiol., 50, 297-303.
Keywords: Apicomlexa; Cercozoa; Ciliophora; Dinophyta; Euglenozoa; Heterokonta; norspermidine; polyamine
Strain(s): 12286304 
Hanagata, N., Karube, I., Chihara, M., Silva, P. C. 1998 Reconsideration of the taxonomy of ellipsoidal species of Chlorella (Trebouxiophyceae, Chlorophyta), with establishment of Watanabea gen. nov. Phycol. Res., 46, 221-229.
Keywords: Chlorella saccharophila; ellipsoidal species of Chlorella; pyrenoid-lacking Chlorella-like algae: Watanabea gen. et sp. nov.
Strain(s): 2189 
Hanazato, T. 1991 Interrelations between Microcystis and Cladocera in the highly eutrophic Lake Kasumigaura, Japan. Int. Revue ges. Hydrobiol., 76, 21-36.
Keywords: Microcystis; Cladocera; toxicity; food chain; Lake Kasumigaura
Strain(s): 44298299 
Handa, S., Nakahara, M., Tsubota, H., Deguchi, H., Nakano, T. 2003 A new aerial alga, Stichococcus ampulliformis sp. nov. (Trebouxiophyceae, Chlorophyta) from Japan. Phycol. Res., 51, 203-210.
Keywords: aerial algae; molecular phylogeny; Stichococcus ampulliformis sp. nov.; Trebouxiophyceae; 18SrRNA gene
Strain(s): 996 
DOI: 10.1046/j.1440-1835.2003.00311.x
Hanschen, E. R., Ferris, P. J., Michod, R. E. 2014 Early evolution of the genetic basis for soma in the Volvocaceae. Evolution, 68, 2014-2025.
Keywords: Gene duplication; germ-soma differentiation; major transitions; multicellularity; regA; Volvox
Strain(s): 2739 
DOI: 10.1111/evo.12416
Hanschen, E.R., Marriage, T.N., Ferris, P.J., Hamaji, T., Toyoda, A., Fujiyama,A., Neme,R., Noguchi,H., Minakuchi, Y., Suzuki, M., Kawai-Toyooka, H., Smith, D.R., Sparks, H., Anderson, J., Bakaric, R., Luria, V., Karger, A., Kirschner, M.W., Durand, P.M., Michod, R.E., Nozaki, H., Olson, B.J. 2016 The Gonium pectorale genome demonstrates co-option of cell cycle regulation during the evolution of multicellularity. Nat. Commun., 7, 11370 (article ID).
Strain(s): 2863 
DOI: 10.1038/ncomms11370
Hara, Y., Chihara, M. 1982 Ultrastructure and taxonomy of Chattonella (Class Raphidophyceae) in Japan. Jpn. J. Phycol., 30, 47-56 (in Japanese with English summary).
Keywords: Chattonella; Chattonella marina comb. nov.; Raphidophyceae; red tides; taxonomy; ultrastructure
Strain(s): 161 
Hara, Y., Doi, K., Chihara, M. 1994 Four new species of Chattonella (Raphidophyceae, Chromophyta) from Japan. Jpn. J. Phycol. (Sôrui), 42, 407-420.
Keywords: Chattonella; C. globosa; C. minima; C. ovata; C. verruculosa; Raphidophyceae; red tide organisms; taxonomy
Strain(s): 161849 
Hara, Y., Inouye, I., Chihara, M. 1985 Morphology and ultrastructure of Olisthodiscus luteus (Raphidophyceae) with special reference to the taxonomy. Bot. Mag. Tokyo, 98, 251-262.
Keywords: Heterosigma; Olisthodiscus luteus; Raphidophyceae; red tide flagellate; taxonomy of Olisthodiscus; ultrastructure of Olisthodiscus
Strain(s): 15 
Harada, K-I., Ozaki, K., Tsuzuki, S., Kato, H., Hasegawa, M., Kuroda, E. K., Arii, S., Tsuji, K. 2009 Blue color formation of cyanobacteria with b-cyclocitral. J. Chem. Ecol., 35, 1295-1301.
Keywords: b-cyclocitral; cyanobacteria; lysis; blue color formation; acid stress
Strain(s): 102112298611808 
Hariganeya, N., Tanimoto, Y., Yamaguchi, H., Nishimura, T., Tawong, W., Sakanari, H., Yoshimatsu, T., Sato, S., Preston, C. M., Adachi, M. 2013 Quantitative PCR method for enumeration of cells of cryptic species of the toxic marine dinoflagellate Ostreopsis spp. in Coastal Waters of Japan. PLoS One, 8, e57627 (article ID).
Strain(s): 3353 
DOI: 10.1371/journal.pone.0057627
Harke, M. J., Berry, D. L., Ammerman, J. W., Gobler, C. J. 2012 Molecular response of the bloom-forming cyanobacterium, Microcystis aeruginosa, to phosphorus Limitation. Microb. Ecol., 63, 188-198.
Strain(s): 843 
PubMed: 21720829
DOI: 10.1007/s00248-011-9894-8
Harke, M. J., Jankowiak, J. G., Morrell, B. K., Gobler, C. J. 2016 Transcriptomic responses in the bloom-forming cyanobacterium Microcystis 2 induced during exposure to zooplankton. Appl. Environ. Microbiol., 83, e02832-16 (article ID).
Strain(s): 843 
PubMed: 28003198
DOI: 10.1128/AEM.02832-16
Hase, E., Mihara, S., Otsuka, H. 1959 An additional note on the nature of sulfur-containing peptide nucleotide complex obtained from Chlorella and yeast. J. Gen. Appl. Microbiol., 5, 43-50.
Strain(s): 2170 
Hase, E., Mihara, S., Otsuka, H., Tamiya, H. 1959 Sulfur-containing peptide-nucleotide complex isolated from Chlorella and yeast cells. Arch. Biochem. Biophys., 83, 170-177.
Strain(s): 2170 
Hase, E., Mihara, S., Tamiya, H. 1960 Role of sulfur in the cell division of Chlorella with special reference to the sulfur compounds appearing during the process of cell division. I. Plant Cell Physiol., 1, 131-142.
Strain(s): 2170 
Hase, E., Mihara, S., Tamiya, H. 1960 Some data on the nature of sulfur-containing peptide-nucleotide compounds obtained from Chlorella cells at different developmental stages in their life cycle. J. Gen. Appl. Microbiol., 6, 61-67.
Strain(s): 2170 
Hase, E., Mihara, S., Tamiya, H. 1960 Sulfur-containing deoxypentose polynucleotides obtained from Chlorella cells. Biochim. Biophys. Acta, 39, 381-382.
Strain(s): 2170 
Hase, E., Mihara, S., Tamiya, H. 1961 Capabilities of various sulfur substances in inducing the cell division of Chlorella arrested by sulfur deficiency. J. Gen. Appl. Microbiol., 7, 173-176.
Strain(s): 2170 
Hase, E., Mihara, S., Tamiya, H. 1961 Role of sulfur in the cell division of Chlorella with special reference to the sulfur compounds appearing during the process of cell division. II. Plant Cell Physiol., 2, 9-24.
Strain(s): 2170 
Hase, E., Miyachi, S., Mihara, S. 1963 A preliminary note on the phosphorus compounds in chloroplast and volutin granules isolated from Chlorella cells. Plant Cell Physiol., Spec. Iss. (Studies on Microalgae and Photosynthetic Bacteria), 619-626.
Strain(s): 2170 
Hase, E., Morimura, Y., Mihara, S., Tamiya, H. 1958 The role of sulfur in the cell division of Chlorella. Arch. Mikrobiol., 32, 87-95.
Strain(s): 2170 
Hase, E., Morimura, Y., Tamiya, H. 1957 Some data on the growth physiology of Chlorella studied by the technique of synchronous culture. Arch. Biochem. Biophys., 69, 149-165.
Strain(s): 2170 
Hase, E., Moriyama, Y., Tamiya, H. 1960 A short remark on the role of sulfur in the cell division of Chlorella. J. Gen. Appl. Microbiol., 6, 68-69.
Strain(s): 2170 
Hase, E., Otsuka, H., Mihara, S., Tamiya, H. 1959 Role of sulfur in the cell division of Chlorella, studied by the technique of synchronous culture. Biochim. Biophys. Acta, 35, 180-189.
Strain(s): 2170 
Hasegawa, H., Maki, T., Asano, K., Ueda, K., Ueda, K. 2004 Detection of iron(III)-binding ligands originating from marine phytoplankton using cathodic stripping voltammetry. Anal. Sci., 20, 89-93.
Strain(s): 116 
Hasegawa, M., Nishizawa, A., Tsuji, K., Kimura, S., Harada, K. 2012 Volatile organic compounds derived from 2-keto-acid decarboxylase in Microcystis aeruginosa. Microbes. Environ., 27, 525-528.
Keywords: cyanobacteria; volatile organic compounds; 3-methyl-1-butanol; 2-keto-acid decarboxylase; Microcystis
Strain(s): 843 
Hasegawa, M., Yoshida, T., Yabuta, M., Terazima, M., Kumazaki, S. 2011 Anti-Stokes fluorescence spectra of chloroplasts in Parachlorella kessleri and maize at room temperature as characterized by near-infrared continuous-wave laser fluorescence microscopy and absorption microscopy. J. Phys. Chem. B, 115, 4184-4194.
Strain(s): 2160 
Hashimoto, H., Murakami, S. 1982 Changes in morphology and ultrastructure of chloroplast along its division cycle in Euglena gracilis cultured synchronously under photoautotrophic condition. Scientific Papers of the College of General Education, Univ. of Tokyo, 32, 55-64.
Strain(s): 48 
Hashimoto, H., Murakami, S. 1982 Chloroplast replication and loss of chloroplast DNA induced by nalidixic acid in Euglena gracilis. Cell Struct. Funct., 7, 111-120.
Strain(s): 48 
Hashimoto, H., Murakami, S. 1983 Effects of cycloheximide and chloramphenicol on chloroplast replication in synchronously dividing cultured cells of Euglena gracilis. New Phytol., 94, 521-529.
Strain(s): 48 
Hasunuma, T., Kikuyama, F., Matsuda, M., Aikawa, S., Izumi, Y., Kondo, A. 2013 Dynamic metabolic profiling of cyanobacterial glycogen biosynthesis under conditions of nitrate depletion. J. Exp. Bot., 64, 2943-2954.
Keywords: 13C; cyanobacteria; glycogen; in vivo labelling; metabolic turnover; metabolomics
Strain(s): 39 
DOI: 10.1093/jxb/ert134
Hata, N., Ogbonna, J. C., Hasegawa, Y., Taroda, H., Tanaka, H. 2001 Production of astaxanthin by Haematococcus pluvialis in a sequential heterotrophic-photoautotrophic culture. J. Appl. Phycol., 13, 395-402.
Keywords: astaxanthin; carotenoids; Haematococcus pluvialis; heterotrophic; photoautotrophic; two phase culture
Strain(s): 144 
Hatakeyama, S., Fukushima, S., Kasai, F., Shiraishi, H. 1994 Assessment of herbicide effects on algal production in the Kokai River (Japan) using a model stream and Selenastrum bioassay. Ecotoxicology, 3, 143-156.
Keywords: herbicides; effects; algal production; algal community; channel carrying river water; bioassay; pesticide analysis
Strain(s): 35 
Hatano, S. 1978 Studies on frost hardiness in Chlorella ellipsoidea: Effects of antimetabolites, surfactants, hormones, and sugars on the hardening process in the light and dark. In Plant Cold Hardiness and Freezing Stress, Eds. by Li, P. H. & Sakai, A., Academic Press, New York, p. 175-196.
Strain(s): 2170 
Hatano, S., Akashi, H., Nogata, Y., Yoshimoto, M. 1987 Fatty acid synthetase system in relation to frost hardiness in Chlorella ellipsoidea. In Plant Cold Hardiness , Ed. by Li, P. H., Alan R. Liss, Inc., New York, p. 101-115.
Strain(s): 2170 
Hatano, S., Joh, T., Miyamoto, T., Yoshimoto, M. 1992 Preparation of protoplasts from Chlorella ellipsoidea C-27. Plant Cell Physiol., 33, 651-655.
Keywords: cell wall-lytic enzyme; chitosanase; Chlorella ellipsoidea C-27; protoplast
Strain(s): 2170 
Hatano, S., Kabata, K. 1982 Transition of lipid metabolksm in relation to frost hardiness in Chlorella ellipsoidea. In Plant Cold Hardiness and Freezing Stress, Eds. by Li, P. H. & Sakai, A., Academic Press, New York, p. 145-156.
Strain(s): 2170 
Hatano, S., Kabata, K., Sadakane, H. 1981 Transition of lipid synthesis from chloroplasts to a cytoplasmic system during hardening in Chlorella ellipsoidea. Plant Physiol., 67, 216-220.
Strain(s): 6872170 
Hatano, S., Kabata, K., Yoshimoto, M., Sadakane, H. 1982 Accumulation of free fatty acid during hardening of Chlorella ellipsoidea. Plant Physiol., 70, 1173-1177.
Strain(s): 2170 
Hatano, S., Sadakane, H., Tutumi, M., Watanabe, T. 1976 Studies on frost hardiness in Chlorella ellipsoidea. I. Development of frost hardiness of Chlorella ellipsoidea in cynchronous culture. Plant Cell Physiol., 17, 451-458.
Strain(s): 2170 
Hatano, S., Sadakane, H., Tutumi, M., Watanabe, T. 1976 Studies on frost hardiness in Chlorella ellipsoidea. II. Effects of inhibitors of RNA and protein synthesis and surfactants on the process of hardening. Plant Cell Physiol., 17, 643-651.
Strain(s): 2170 
Hattori, A. 1957 Studies on the metabolism of urea and other nitrogenous compounds in Chlorella ellipsoidea. J. Biochem., 44, 253-273.
Strain(s): 2170 
Hattori, A., Fujita, Y. 1959 Crystalline phycobilin chromoproteids obtained from a blue-green alga, Tolypothrix tenuis. J. Biochem., 46, 633-644.
Strain(s): 37 
Hattori, A., Fujita, Y. 1959 Effect of pre-illumination on the formation of phycobilin pigments in a blue-green alga, Tolypothrix tenuis. J. Biochem., 46, 1259-1261.
Strain(s): 37 
Hattori, A., Fujita, Y. 1959 Formation of phycobilin pigments in a blue-green alga, Tolypothrix tenuis, as induced by illumination with colored lights. J. Biochem., 46, 521-524.
Strain(s): 37 
Hattori, A., Fujita, Y. 1959 Spectroscopic studies on the phycobilin pigments obtained from blue-green and red algae. J. Biochem., 46, 903-909.
Strain(s): 37 
Hattori, A., Uesugi, I. 1968 Ferredoxin-dependent photoreduction of nitrate and nitrite by subcellular preparations of Anabaena cylindrica. In Comparative Biochemistry and Biophysics of Photosynthesis, Eds. by Shibata, K., et al., University of Tokyo Press, Tokyo, p. 201-205.
Strain(s): 19 
Hautala, H., Lamminmäki, U., Spoof, L., Nybom, S., Meriluoto, J., Vehniäinen, M. 2013 Quantitative PCR detection and improved sample preparation of microcystin-producing Anabaena, Microcystis and Planktothrix. Ecotox. Environ. Safe., 87, 49-56.
Keywords: Microcystin; Cyanobacteria; Quantitative PCR; mcyB; Sample prepararion
Strain(s): 107 
DOI: 10.1016/j.ecoenv.2012.10.008
Hayama, M., Nakada, T., Hamaji, T., Nozaki, H. 2010 Morphology, molecular phylogeny and taxonomy of Gonium maiaprilis sp. nov. (Goniaceae, Chlorophyta) from Japan. Phycologia, 49, 221-234.
Keywords: Chlorophyceae; Goniaceae; Gonium; Gonium maiaprilis sp. nov.; ITS; molecular phylogeny; morphology; rbcL; reproduction; taxonomy
Strain(s): 2455245624572458245924602461 
DOI: 10.2216/PH09-56.1
Hayashi, S., Jang, J. E., Itoh, K., Suyama, K., Yamamoto, H. 2011 Construction of river model biofilm for assessing pesticide effects. Arch. Environ. Contam. Toxicol., 60, 44-56.
Strain(s): 71489803 
Hayashi-Ishimaru, Y., Ehara, M., Inagaki, Y., Ohama, T. 1997 A deviant mitochondrial genetic code in prymnesiophytes (yellow-algae): UGA codon for tryptophan. Curr. Genet., 32, 296-299.
Keywords: Prymnesiophyta; deviant genetic code; cytochrome c oxidase subunit I; the codon-capture theory
Strain(s): 353388 
Hayashi-Ishimaru, Y., Ohama, T., Kawatsu, Y., Nakamura, K., Osawa, S. 1996 UAG is a sense codon in several chlorophycean mitochondria. Curr. Genet., 30, 29-33.
Keywords: deviant genetic code; COXI; Chlorophyceaen mitochondria; release factor
Strain(s): 209227415 
Hepperle, D., Nozaki, H., Hohenberger, S., Huss, V. A. R., Morita, E., Krienitz, L. 1998 Phylogenetic position of the Phacotaceae within the Chlamydophyceae as revealed by analysis of 18S rDNA and rbcL sequences. J. Mol. Evol., 47, 420-430.
Keywords: Phacotaceae; Volvocales; 18S rDNA phylogeny; lorica-bearing flagellates; green algae
Strain(s): 858859862 
DOI: 10.1007/PL00006399
Higashiyama, T., Yamada, T. 1991 Electrophoretic karyotyping and chromosomal gene mapping of Chlorella. Nucleic Acids Res., 19, 6191-6195.
Strain(s): 2163216621712189 
Hino, S. 1991 An examination of algal bioassay method for agricultural chemicals and heavy metals in a water environment. Hokkaido Kankyô Kagaku Kenkyû Sentâ Syohô, 18, 41-49 (in Japanese with English summary).
Strain(s): 228229 
Hirabaru, C., Izumo,A., Fujiwara, S., Tadokoro, Y., Shimonaga, T., Konishi, M., Yoshida, M., Fujita, N., Nakamura, Y., Yoshida, M., Kuroiwa, T., Tsuzuki, M. 2010 The primitive rhodophyte Cyanidioschyzon merolae contains a semiamylopectin-type, but not an amylose-type, α-glucan. Plant Cell Physiol., 51, 682-693.
Keywords: Amylose; Cyanidioschyzon; Floridean starch; Glycogen; Starch synthase; Semiamylopectin
Strain(s): 551 
Hirabayashi, R., Imamura, N. 2003 Action mechanism of a selective anti-cyanobacterial compound, argimicin A. J. Antibiotics, 56, 154-159.
Strain(s): 4581102230298592 
Hirai, A., Nishimura, T., Iwamura, T. 1979 Synthetic rates of chloroplast and cytoplasmic ribosomal ribonucleic acids during the cell cycle of Chlorella. Plant Cell Physiol., 20, 93-102.
Keywords: cell cycle; Chlorella; chloroplast rRNA; cytoplasmic rRNA; RNA synthesis; radioisotopic precursor
Strain(s): 2170 
Hiraide, R., Kawai-Toyooka, H., Hamaji, T ., Matsuzaki, R., Kawafune, K., Abe, J., Sekimoto, H., Umen, J., Nozaki, H. 2013 The evolution of male–female sexual dimorphism predates the gender-based divergence of the mating locus gene MAT3/RB. Mol. Biol. Evol., 30, 1038-1040.
Keywords: gender-based divergence; gene conversion; male–female sexual dimorphism; MAT3/RB, mating type locus; volvocine algae
Strain(s): 722733866171017111712185918613985 
PubMed: 23364323
DOI: 10.1093/molbev/mst018
Hirano, H., Iguchi, M., Nishimura, T., Iwamura, T. 1986 Isolation of high molecular weight cellular DNA with a novel granulated hydroxyapatite. Agric. Biol. Chem., 50, 219-221.
Strain(s): 2170 
Hirano, H., Takeda, Y., Iwamura, T. 1986 Unique repetitive sequences of 170bp in Chlorella. Plant Mol. Biol., 7, 311-317.
Keywords: Chlorella; HaeIII family; repetitive sequence; tandem repeat
Strain(s): 21602170 
Hirano, M., Mori, H., Miura, Y., Matsunaga, N., Nakamura, N., Matsunaga, T. 1990 γ-linolenic acid production by microalgae. Appl. Biochem. Biotechnol., 24/25, 183-191.
Keywords: g-linolenic acid; Spirulina platensis; green algae; lipid; marine microalgae
Strain(s): 39 
Hirano, T., Masho, R., Koizumi, D., Tabata, S., Suzuki, K., Sakabe, M., Nakano, Y., Sato, N., Sudo, R. 2006 Ecotoxicity testing of bioremediation agents for shoreline oil-spill clean up. Jpn. J. Environ. Toxicol., 9, 115-131.
Keywords: ecotoxicity; bioremediation; oil-spill; acute toxicity; marine organisms
Strain(s): 324 
Hirashima, T., Tajima, N., Sato, N. 2016 Draft genome sequences of four species of Chlamydomonas containing phosphatidylcholine. GenomeA, 4, e01070-16 (article ID).
Strain(s): 2202220722122242 
DOI: 10.1128/genomeA.01070-16
Hirata, K., Phunchindawan, M., Tukamoto, J., Goda, S., Miyamoto, K. 1996 Cryopreservation of microalgae using encapsulation-dehydration. CryoLetters, 17, 321-328.
Keywords: Dunaliella tertiolecta; microalgae; cryopreservation; encapsulation-dehydration
Strain(s): 192224273244242375396422437 
Hiroishi, S., Nakai, R., Seto, H., Yoshida, T., Imai, I. 2002 Identification of Heterocapsa circularisquama by means of antibody. Fish. Sci., 68, Suppl., 627-628.
Keywords: identification; Heterocapsa; dinoflagellate; antibody
Strain(s): 235472473 
Hiroishi, S., Uchida, A., Nagasaki, K., Ishida, Y. 1988 A new method for identification of inter- and intra-species of the red tide algae Chattonella antiqua and Chattonella marina (Raphidophyceae) by means of monoclonal antibodies. J. Phycol., 24, 442-444.
Keywords: Chattonella; identification; immunofluorescence; inter-species; intra-species; method; monoclonal antibody; red tide
Strain(s): 12838485113114116 
Hiroishi, S., Uchida, A., Nagasaki, K., Ishida, Y. 1989 A new method for inter- and intra-species identification of red tide algae Chattonella antiqua and Chattonella marina by means of monoclonal antibodies. In Red Tides: Biology, Environmental Science, and Toxicology, Eds. by Okaichi, T., Anderson, D. M. & Nemoto, T., Elsevier Science Pub., New York, p. 299-300.
Strain(s): 85 
Hirokawa, T., Hata, M., Takeda, H. 1982 Correlation between the starch level and the rate of starch synthesis during the developmental cycle of Chlorella ellipsoidea. Plant Cell Physiol., 23, 813-820.
Keywords: 14C-fixation; cell cycle; Chlorella ellipsoidea; photosynthesis; starch accumulation; starch synthesis; synchronous culture
Strain(s): 2170 
Hirokawa, T., Miyachi, S., Tamiya, H. 1958 Effect of hydrogen peroxide on the light-induced capacity of carbon dioxide-fixation in green algae. J. Biochem., 45, 1005-1010.
Strain(s): 2170 
Hirokawa, T., Takeda, H. 1980 Automatic analysing system for the liquid chromatography. J. Gen. Edu. Dept., Niigata Univ., 10, 97-106.
Strain(s): 2262170 
Hiroki, M., Shimizu, A., Li, R., Watanabe, M., Watanabe, M. M. 1998 Development of a database system useful for identification of Anabaena spp. (Cyanobacteria). Phycol. Res., 46, Suppl., 85-93.
Keywords: Anabaena; computer; cyanobacteria; database system; identification; morphology
Strain(s): 810819826835 
Hirooka, T., Akiyama, Y., Tsuji, N., Nakamura, T., Nagase, H., Hirata, K., Miyamoto, K. 2003 Removal of hazardous phenols by microalgae under photoautotrophic conditions. J. Biosci. Bioeng., 95, 200-203.
Keywords: green algae; cyanobacteria; nitrophenol; chlorophenol; bisphenol A; photoautotrophic conditions
Strain(s): 192344422437 
Hirosawa, T. 1984 Near-UV and blue light effects in cyanobacteria. In Blue Light Effects in Biological Systems, Ed. by Senger, H., Springer-Verlag, Berlin, p. 39-47.
Strain(s): 3277 
Hirose, M., Reiner, J. D., Hidaka, M., Suda, S. 2008 Phylogenetic analyses of potentially free-living Symbiodinium spp. Isolated from coral reef sand in Okinawa, Japan. Mar. Biol., 155, 105-112.
Strain(s): 263826392640264126422643 
Hirose, Y., Fujisawa, T., Ohtsubo, Y., Katayama, M., Misawa, N., Wakazuki, S., Shimura, Y., Nakamura, Y., Kawachi, M., Yoshikawa, H., Eki, T., Kanesaki, Y. 2016 Complete genome sequence of cyanobacterium Nostoc sp. NIES-3756, a potentially useful strain for phytochrome-based bioengineering. J. Biotechnol., 218, 51-52.
Strain(s): 3756 
DOI: 10.1016/j.jbiotec.2015.12.002
Hirose, Y., Katayama, M., Ohtsubo, Y., Misawa, N., Iioka, E., Suda, W., Oshima, K., Hanaoka, M., Tanaka, K., Eki, T., Ikeuchi, M., Kikuchi, Y., Ishida, M., Hattori, M. 2015a Complete genome sequence of cyanobacterium Geminocystis sp. strain NIES-3708, which performs type II complementary chromatic acclimation. GenomeA, 3, e00357-15 (article ID).
Strain(s): 3708 
DOI: 10.1128/genomeA.00385-15
Hirose, Y., Katayama, M., Ohtsubo, Y., Misawa, N., Iioka, E., Suda, W., Oshima, K., Hanaoka, M., Tanaka, K., Eki, T., Ikeuchi, M., Kikuchi, Y., Ishida, M., Hattori, M. 2015b Complete genome sequence of cyanobacterium Geminocystis sp. strain NIES-3709, which harbors a phycoerythrin-rich phycobilisome. GenomeA, 3, e00385-15 (article ID).
Strain(s): 3709 
DOI: 10.1128/genomeA.00385-15
Hiwatari, T., Kasai, F., Watanabe, M. M., Nei, T. 1984 Cryopreservation of Scenedesmus acutus and Pediastrum duplex in liquid nitrogen - Survival and growth after freezing. Jpn. J. Freez. Dry., 30, 27-31 (in Japanese with English title).
Strain(s): 95213 
Hodoki, Y., Ohbayashi, K., Kobayashi, Y., Okuda, N., Nakano, S. 2012 Detection and identification of potentially toxic cyanobacteria: ubiquitous distribution of Microcystis aeruginosa and Cuspidothrix issatschenkoi in Japanese lakes. Harmful Algae, 16, 49-57.
Keywords: Anatoxin-a; Automated rRNA intergenic spacer analysis (ARISA); Cuspidothrix issatschenkoi; Cyanotoxin; Microcystin; Microcystis aeruginosa
Strain(s): 30102111230512843932937991164516691698172919502116 
Hodoki, Y., Ohbayashi, K., Kobayashi, Y., Okuda, N., Nakano, S.-I. 2011 Temporal variation in cyanobacteria species composition and photosynthetic activity in experimentally induced blooms. J. Plankton Res., 33, 1410-1416.
Keywords: cyanobacterial bloom; DCMU [3'-(3,4-dichlorophenyl)-1',1'-dimethyl urea]; maximum quantum yieldMicrocystis aeruginosa
Strain(s): 843 
Hogetsu, D., Miyachi, S. 1970 Effect of oxygen on the light-enhanced dark carbon dioxide fixation in Chlorella cells. Plant Physiol., 45, 178-182.
Strain(s): 2170 
DOI: 10.1104/pp.45.2.178
Hogetsu, D., Miyachi, S. 1977 Effects of CO2 concentration during growth on subsequent photosynthetic CO2 fixation. Plant Cell Physiol., 18, 347-352.
Strain(s): 2160 
Hogetsu, D., Miyachi, S. 1979 Role of carbonic anhydrase in photosynthetic CO2 fixation in Chlorella. Plant Cell Physiol., 20, 747-756.
Keywords: carbonic anhydrase; Chlorella; CO2 fixation; photosynthesis; ribulose 1,5-bisphosphate carboxylase
Strain(s): 2160 
Honda, D., Yokota, A., Sugiyama, J. 1999 Detection of seven major evolutionary lineages in cyanobacteria based on the 16S rRNA gene sequence analysis with new sequences of five marine Synechococcus strains. J. Mol. Evol., 48, 723-739.
Keywords: cyanobacteria; Synechococcus; phylogeny; ribosomal RNA; maximum-likelihood method; neighbor-joining method; rate homo- and heterogeneous models
Strain(s): 27208510211621182119 
Honda, R., Boonnorat, J., Chiemchaisri, C., Chiemchaisri, w., Yamamoto, K. 2012 Carbon dioxide capture and nutrients removal utilizing treated sewage by concentrated microalgae cultivation in a membrane photobioreactor. Biores. Technol., 125, 59-64.
Keywords: Carbon dioxide capture; Nutrients removal; Membrane photobioreactor; Microalgae; Botryococcus braunii
Strain(s): 2199 
DOI: 10.1016/j.biortech.2012.08.138
Honda, R., Rukapan, W., Komura, H., Teraoka, Y., Noguchi, M., Hoek, E.M.V. 2015 Effects of membrane orientation on fouling characteristics of forward osmosis membrane in concentration of microalgae culture. Biores. Technol., 197, 429-433.
Keywords: Forward osmosis; Microalgae; Membrane fouling; Extracellular polymeric substances (EPS)
Strain(s): 2170 
DOI: 10.1016/j.biortech.2015.08.096
Yoshida, T., Takashima, Y., Tomaru Y., Shirai, Y., Takao, Y., Hiroishi, S., Nagasaki, K. 2012 A protein binding to an upstream sequence of ftsZ involved in coordination of DNA replication and cell division in Microcystis aeruginosa. Fish. Sci., 78, 375-379.
Keywords: Cyanobacteria; Microcystis; Cell division; DNA replication; ftsZ
Strain(s): 298 
Honjo, M., Matsui, K., Ueki, M., Nakamura, R., Fuhrman, J. A., Kawabata, Z. 2006 Diversity of virus-like agents killing Microcystis aeruginosa in a hyper-eutrophic pond. J. Plankton Res., 28, 407-412.
Strain(s): 298 
Hori, K. Maruyama, F., Fujisawa, T., Togashi, T., Yamamoto, N., Seo, M., Sato, S., Yamada, T., Mori, H., Tajima, N., Moriyama, T., Ikeuchi, M., Watanabe, M., Wada, H., Kobayashi, K., Saito, M., Masuda, T., Sasaki-Sekimoto, Y., Mashiguchi, K., Awai, K., Shimojima, M., Masuda, S., Iwai, M., Nobusawa, T., Narise, T., Kondo, S., Saito, H., Sato, R., Murakawa, M., Ihara, Y., Oshima-Yamada, Y., Ohtaka, K., Satoh, M., Sonobe, K., Ishii, M., Ohtani, R., Kanamori-Sato, M., Honoki, R., Miyazaki, D., Mochizuki, H., Umetsu, J., Higashi, K., Shibata, D., Kamiya, Y., Sato, N., Nakamura, Y., Tabata, S., Ida, S., Kurokawa, K., Ohta, H. 2014 Klebsormidium flaccidum genome reveals primary factors for plant terrestrial adaptation. Nat. Commun., 5, 3978 (article ID).
Strain(s): 2285 
PubMed: 24865297
DOI: 10.1038/ncomms4978
Hori, S., Sekimoto, H., Abe, J. 2012 Properties of cell surface carbohydrates in sexual reproduction of the Closterium peracerosum–strigosum–littorale complex (Zygnematophyceae, Charophyta). Phycol. Res., 60, 254-260.
Keywords: cell-cell recognition; Closterium; ConcanavalinA; conjugation; lectin; Lycopersicon esculentum lectin; sexual reproduction
Strain(s): 67 
Hoshina, R., Fujiwara, Y. 2013 Molecular characterization of Chlorella cultures of the National Institute for Environmental Studies culture collection with description of Micractinium inermum sp. nov., Didymogenes sphaerica sp. nov., Didymogenes soliella sp. nov., (Chlorellaceae, Trebouxiophyceae). Phycol. Res., 61, 124-132.
Keywords: Chlorella; Didymogenes; group 1 intron; internal transcribed spacer 2; Micractinium; species concept
Strain(s): 216721712330 
Hoshina, R., Imamura, N. 2008 Eu-Chlorella large subunit rDNA sequences and group I introns in ribosomal DNA of the paramecian symbiotic alga NC64A. Phycol. Res., 56, 21-32.
Keywords: Chlorella vulgaris; group I intron; intron phylogeny; intron transposition; large subunit ribosomal DNA; NC64A
Strain(s): 227 
Hoshina, R., Imamura, N. 2009 Phylogenetically close group I introns with different positions among Paramecium bursaria photobionts imply a primitive stage of intron diversification. Mol. Biol. Evol., 26, 1309-1319.
Keywords: degenerative homing; intron diversification; intron transposition; Paramecium bursaria symbiotic algae; reverse splicing
Strain(s): 2541 
PubMed: 19279084
DOI: 10.1093/molbev/msp044
Hoshina, R., Kamako, S.-I., Imamura, N. 2004 Phylogenetic position of endosymbiotic green algae in Paramecium bursaria Ehrenberg from Japan. Plant Biol., 6, 447-453.
Keywords: 18S rDNA; Chlorella; endosymbiont; ITS; Paramecium bursaria; phylogeny
Strain(s): 25402541 
Hoshina, R., Kato, Y., Kamako, S., Imamura, N. 2005 Genetic evidence of "American" and "European" type symbiotic algae of Paramecium bursaria Ehrenberg. Plant Biol., 7, 526-532.
Keywords: 18S rDNA; "American"; "European"; Chlorella; ITS; Paramecium bursaria; Phylogeny
Strain(s): 25402541 
Hosoi-Tanabe, S., Sako, Y. 2005 Species-specific detection and quantification of toxic marine Dinoflagellates Alexandrium tamarense and A. catenella by reai-time PCR assay. Mar. Biotechnol., 7, 506-514.
Keywords: toxic dinoflagellate; — Alexandrium; paralytic shellfish poisoning (PSP); real-time PCR; species-specific identification; quantification
Strain(s): 112293559 
Hosokawa, Y., Miki-Noumura, T. 1987 Bending motion of Chlamydomonas axonemes after extrusion of central-pair microtubules. J. Cell Biol., 105, 1297-1301.
Strain(s): 2239 
Hosomi, M., Sudo, R. 1979 Studies on the effects of sediments on algal growth - Algal growth potential of sediments. Res. Rep. Natl. Inst. Environ. Stud., No. 6, 115-121 (in Japanese with English summary).
Strain(s): 35 
Hosoya, R., Hamana, K., Isobe, M., Yokota, A. 2005 Polyamine distribution profiles within Cyanobacteria. Microbiol. Cult. Coll., 21, 3-8.
Keywords: cyanobacteria; homospermidine; polyamine; spermidine
Strain(s): 5078798081512515592593610846847 
Houdai, T., Matsuoka, S., Matsumori, N., Murata, M. 2004 Membrane-permeabilizing activities of amphidinol 3, polyene-polyhydroxy antifungal from a marine dinoflagellate. Biochem. Biophys. Acta, 1667, 91-100.
Keywords: amphidinol; Amphidinium klebsii; amphotericin B
Strain(s): 613 
Houdai, T., Matsuoka, S., Morsy, N., Matsumori, N., Satake, M., Murata, M. 2005 Hairpin conformation of amphidinols possibly accounting for potent membrane permeabilizing activities. Tetrahedron, 61, 2795-2802.
Keywords: amphidinol membrane-permeabilizaion
Strain(s): 613 
Houdai, T., Matsuoka, S., Murata, M., Satake, M., Ota, S., Oshima, Y., Rhodes, L. L. 2001 Acetate labeling patterns of dinoflagellate polyketides, amphidinols 2, 3 and 4 Tetrahedron, 57, 5551-5555.
Keywords: dinoflagellate; polyketides; biosynthesis; amphidinol; Amphidinium; isotopic labelling
Strain(s): 613 
Houndan, A., Billard, C., Marie, D., Not, F., Sáez, A. G., Young, J. R., Probert, I. 2003 Holococcolithophore-heterococcolithophore (Haptophyta) life cycles: flow cytometric analysis of relative ploidy levels. Systematics and Biodiversity, 4, 453-465.
Keywords: Coccolithophore; haplo-diploid; Haptophyta; heterococcolith; holococcolith; life cycle; microalgae; ploidy
Strain(s): 2694 
Howe, A. T., Bass, D., Vickerman, K., Chao, E. E., Cavalier-Smith, T. 2009 Phylogeny, taxonomy, and astounding genetic diversity of Glissomonadida ord. nov., the dominant gliding zooflagellates in soil (Protozoa: Cercozoa). Protist, 160, 159-189.
Keywords: Glissomonadida; Sandonidae; Allapsidae; Bodomorphidae; Heteromita; phylogeny
Strain(s): 24142415241724182419242224232424242524262427242824292430 
Hu, ZY., Li, YT., Sommerfeld, M., Chen, F., Hu, Q. 2008 Enhanced protection against oxidative stress in an astaxanthin-overproduction Haematococcus mutant (Chlorophyceae). Eur. J. Phycol., 43, 365-376.
Keywords: astaxanthin; carotenogenesis; flow cytometry; Haematococcus pluvialis; oxidative stress; pigment mutant
Strain(s): 144 
Hua, JM., Smith, D. R., Borza, T., Lee, R. W. 2012 Similar relative mutation rates in the three genetic compartments of Mesostigma and Chlamydomonas. Protist, 163, 105-115.
Keywords: Chlamydomonas; genome architecture; Mesostigma; mutation rate; silent substitution rate
Strain(s): 296476 
PubMed: 21621456
DOI: 10.1016/j.protis.2011.04.003
Huang, Y., Lee, H., Lai, C. 2013 Engineering of the growth environment of microalgae with high biomass and lipid productivity. J. Nanosci. Nanotechnol., 13, 2117-2121.
Keywords: Microalgae; Cultivation Environment; Carbon Dioxide; Biomass Productivity; Lipid Productivity
Strain(s): 2199 
DOI: 10.1166/jnn.2013.6877
Huss, V. A. R., Wein, K. H., Kessler, E. 1988 Deoxyribonucleic acid reassociation in the taxonomy of the genus Chlorella. Arch. Mikrobiol., 150, 509-511.
Strain(s): 2163 
Ichimura, T. 1971 Sexual cell division and conjugation-papilla formation in sexual reproduction of Closterium strigosum. In Proceedings of the Seventh International Seaweed Symposium, University of Tokyo Press, Tokyo, p. 208-214.
Strain(s): 66262 
Ichimura, T. 1973 The life cycle and its control in some species of Closterium, with special reference to the biological species problems. Thesis D. Sci., University of Tokyo, 69 pp., 11 tables, 40 figs.
Strain(s): 6667124127174175176177179180181182183185198202262337338450451 
Ichimura, T. 1981 Mating types and reproductive isolation in Closterium ehrenbergii Meneghini. Bot. Mag. Tokyo, 94, 325-334.
Keywords: biosystematic study; Closterium ehrenbergii; mating group; mating type; reproductive isolation
Strain(s): 228229 
DOI: 10.1007/BF02493393
Ichimura, T. 1983 Hybrid inviability and predominant survival of mating type minus progeny in laboratory crosses between two closely related mating groups of Closterium ehrenbergii. Evolution, 37, 252-260.
Strain(s): 228229 
Ichimura, T., Itoh, T. 1977 17. Preservation methods of microalgae (I) [17. Bisaisôrui no hozonhô (I)]. In Preservation methods of microorganisms [Biseibutsu Hozonhô], Ed. by Nei, T., University of Tokyo Press, Tokyo, p. 355-373 (in Japanese without English title).
Strain(s): 19222324272830313233343637383944454647484950123127131144152173175179180181182183185198200203206217226227241266267268271295309310338379436448450527 
Ichimura, T., Kasai, F. 1984 Time lapse analyses of sexual reproduction in Closterium ehrenbergii (Conjugatophyceae). J. Phycol., 20, 258-265.
Keywords: Closterium ehrenbergii; conjugation; desmids; mating type; sexual reproduction
Strain(s): 228229 
Ichimura, T., Kasai, F. 1985 Studies on the life cycle of Spinoclosterium cuspidatum (Bailey) Hirano (Conjugatophyceae). Phycologia, 24, 205-216.
Strain(s): 325 
Ichimura, T., Kasai, F. 1987 Time-lapse analyses of sexual isolation between two closely related mating groups of the Closterium ehrenbergii species complex (Chlorophyta). J. Phycol., 23, 523-534.
Keywords: Closterium ehrenbergii; desmids; mating group; multiple-choice mating; no-choice mating; sexual interactions; sexual isolation; time-lapse photomicrography
Strain(s): 228229 
Ichimura, T., Kasai, F. 1989 Life cycles of homothallic and heterothallic clones of Triploceras gracile Bailey (Desmidiaceae, Chlorophyta). Phycologia, 28, 212-221.
Strain(s): 789790791792793794795796 
Ichimura, T., Watanabe, M. 1974 The Closterium calosporum complex from the Ryukyu Islands - Variation and taxonomical problems. Mem. Natn. Sci. Mus. Tokyo, 7, 89-102, pls. 13-14.
Strain(s): 163164168186187194271339340341 
Ichimura, T., Watanabe, M. M. 1977 An axenic clone of Microcystis aeruginosa Kutz. emend. Elenkin from Lake Kasumigaura. Bull. Jpn. Soc. Phycol., 25, 177-181.
Strain(s): 44 
Ichinomiya, M., Lopes dos Santos, A., Gourvil, P., Yoshikawa, S., Kamiya, M., Ohki, K., Audic, S., De Vargas, C., Noël, M. H., Vaulot, D., Kuwata, A. 2016 Diversity and oceanic distribution of the Parmales (Bolidophyceae), a picoplanktonic group closely related to diatoms. ISME Journal, 10, 2419-2434.
Strain(s): 2682336933703371 
PubMed: 27003244
DOI: 10.1038/ismej.2016.38
Ichinomiya, M., Yoshikawa, S., Kmiya, M., Ohki, K., Takaichi, S., Kuwata, A. 2011 Isolation and characterization of Parmales (Heterokonta/Heterokontophyta/Stramenopiles) from the Oyashio region, Western North Pacific. J. Phycol., 47, 144-151.
Keywords: Bolidophyceae; diatoms; heterokonts; Parmales; PDMPO; phylogeny; stramenopiles; Triparma laevis
Strain(s): 2682 
Iehara, M. 1990 Kinetic analysis of the growth of Chlorella vulgaris. Biotech. Bioeng., 36, 198-206.
Strain(s): 227 
Iida, H., Nishii, I., Inouye, I. 2011 Embryogenesis and positioning in Platydorina caudata (Volvocaceae, Chlorophyta). Phycologia, 50, 530-540.
Keywords: Volvocaceae; inversion; intercalation; cytoplasmic bridge; stalk; colony formation
Strain(s): 728729 
Iida, H., Ota, S., Inouye, I. 2013 Cleavage, incomplete inversion, and cytoplasmic bridges in Gonium pectorale (Volvocales, Chlorophyta). J. Plant Res., 126, 699-707.
Keywords: Cytoplasmic bridge; Gonium; Inversion; Multicellularity; Transmission electron microscopy; Volvocales
Strain(s): 645 
DOI: 10.1007/s10265-013-0553-7
Iida, K., Takishita, K., Ohshima, K., Inagaki, Y. 2007 Assessing the monophyly of chlorophyll-c containing plastids by multi-gene phylogenies under the unlinked model conditions. Mol. Phylogenet. Evol., 45(1), 227-238.
Keywords: chromist; chromalveolate; secondary endosymbiosis; model misspecification; separate model; concatenate model
Strain(s): 115 
Ikegami, S., Imai, I., Kato, J., Ohtake, H. 1995 Chemotaxis toward inorganic phosphate in the red tide alga Chattonella antiqua. J. Plankton Res., 17, 1587-1591.
Strain(s): 1 
Ikushima, T. 1975 Action of furylfuramide (AF-2) on chloroplasts of Euglena gracilis. Annu. Rep. Res. Reactor Inst. Kyoto Univ., 8, 83-85.
Strain(s): 48 
Imai, A., Fukushima, T., Matsushige, K. 1999 Effects of aquatic humic substances on the growth of the cyanobacterium Microcystis aeruginosa. J. Jpn. Soc. Wat. Environ. [Mizukankyô Gakkai Shi], 22, 555-560 (in Japanese with English summary).
Keywords: aquatic humic substances; Microcystis aeruginosa; iron limitation; siderophore; Lake Kasumigaura
Strain(s): 98 
Imai, A., Fukushima, T., Matsushige, K. 1999 Effects of iron limitation and aquatic humic substances on the growth of Microcystis aeruginosa. Can. J. Fish. Aquat. Sci., 56, 1929-1937.
Strain(s): 98 
Imai, I., Fujimaru, D., Nishigaki, T. 2002 Co-culture of fish with macroalgae and associated bacteria: A possible mitigation strategy for noxious red tides in enclosed coastal sea. Fish. Sci., 68, 493-496.
Keywords: red tide; mitigation; algicidal bacteria; macroalgae; co-culture of fish and macroalgae
Strain(s): 1 
Imai, I., Hatano, M., Naito, K. 2004 Development of a chemically defined artificial medium for marine red tide-causing raphidophycean flagellates. Plankton Biol. Ecol., 95, 95-102.
Keywords: Chattonella; Fibrocapsa; artificial media; molybdenum; iodine
Strain(s): 1 
Imai, I., Ishida, Y., Hata, Y. 1993 Killing of marine phytoplankton by a gliding bacterium Cytophaga sp., isolated from the coastal sea of Japan. Mar. Biol., 116, 527-532.
Strain(s): 1 
Imai, I., Ishida, Y., Sakaguchi, K., Hata, Y. 1995 Algicidal marine bacteria isolated from northern Hiroshima Bay, Japan. Fish. Sci., 61, 628-636.
Keywords: algicidal bacteria; red tide; Chattonella; Alteromonas
Strain(s): 1 
Imai, I., Ishida, Y., Sawayama, S., Hata, Y. 1991 Isolation of a marine gliding bacterium that kills Chattonella antiqua (Raphidophyceae). Nippon Suisan Gakkaishi, 57, 1409.
Strain(s): 1 
Imai, I., Kim, M. C., Nagasaki, K., Itakura, S., Ishida, Y. 1998 Detection and enumeration of microorganisms that are lethal to harmful phytoplankton in coastal waters. Plankton Biol. Ecol., 45, 19-29.
Keywords: red tide; Chattonella; Heterosigma; killer bacteria; viruses
Strain(s): 1 
Imai, I., Kim, M. C., Nagasaki, K., Itakura, S., Ishida, Y. 1998 Relationships between dynamics of red tide-causing raphidophycean flagellates and algicidal micro-organisms in the coastal sea of Japan. Phycol. Res., 46, 139-146.
Keywords: algicidal bacteria; Chattonella; Heterosigma; Raphidophyceae; red tide; virus
Strain(s): 1 
Imai, I., Nakagiri, S., Nagai, K., Nagasaki, K., Itakura, S., Yamaguchi, M. 1998 Fluctuations of algicidal microorganisms against the harmful dinoflagellate Heterocapsa circularisquama in Ago Bay, Mie Prefecture, Japan. Bull. Nansei Natl. Fish. Res. Inst., 31, 53-61 (in Japanese with English summary).
Keywords: red tide; Heterocapsa circularisquama; algicidal bacteria; viruses; Ago Bay
Strain(s): 1 
Imaizumi, M., Sekimoto, H., Noguchi, T. 2007 Induction of sex pheromone secretion and observations of the secretory pathway in the Closterium peracerosum-strigosum-littorale complex. Plant Sci., 173, 206-212.
Keywords: Closterium peracerosum-strigosum-littorale; Immunoelectron microscopy; Protoplast release-inducing protein; Sex pheromone; Sexual reproduction; Zygote formation
Strain(s): 67 
Imamura, N., Motoike, I., Noda, M., Adachi, K., Konno, A., Fukami, H. 2000 Argimicin A, a novel anti-cyanobacterial compound produced by an algae-lysing bacterium. J. Antibiotics, 53, 1317-1319.
Strain(s): 102298 
Imamura, N., Motoike, I., Shimada, N., Nishikori, M., Morisaki, H., Fukami, H. 2001 An efficient screening approach for anti-Microcystis compounds based on knowledge of aquatic microbial ecosystem. J. Antibiotics, 54, 582-587.
Strain(s): 102228 
Imamura, S., Hanaoka, M., Tanaka, K. 2008 The plant-specific TFIIB-related protein, pBrp, is a general transcription factor for RNA polymerase I. EMBO J., 27, 2317-2327.
Strain(s): 3377 
PubMed: 18668124
DOI: 10.1038/emboj.2008.151
Imamura, S., Kanesaki, Y., Ohnuma, M., Inouye, T., Sekine, Y., Fujiwara, T., Kuroiwa, T., Tanaka, K. 2009 R2R3-type MYB transcription factor, CmMYB1, is a central nitrogen assimilation regulator in Cyanidioschyzon merolae. Proc. Nati. Acad. Sci. U. S. A., 106, 12548-12553.
Strain(s): 3377 
PubMed: 1959251
DOI: 10.1073/pnas.0902790106
Imamura, S., Terashita, M., Ohnuma, M., Maruyama, S., Minoda, A., Weber, A. P. M., Inouye, T., Sekine, Y., Fujita, Y., Omata, T., Tanaka, K. 2010 Nitrate assimilatory genes and their transcriptional regulation in a unicellular red alga Cyanidioschyzon merolae: genetic evidence for nitrite reduction by a sulfite reductase-like enzyme. Plant Cell Physiol., 51, 707-717.
Keywords: Cyanidioschyzon merolae; Nitrate assimilation; Nitrite reductase; Nitrogen regulation; Red alga; Sulfite reductase
Strain(s): 3377 
Imase, M., Ohko, Y., Takeuchi, M., Hanada, S. 2013 Estimating the viability of Chlorella exposed to oxidative stresses based around photocatalysis. Int. Biodeterior. Biodegrad., 78, 1-6.
Keywords: Autofluorescence; Cell staining; Chlorella sorokiniana; Oxidative stress: TiO2 photocatalysis; Viability assay
Strain(s): 2169 
DOI: 10.1016/j.ibiod.2012.12.006
Imoto, Y., Kuroiwa, H., Yoshida, Y., Ohnuma, M., Fujiwara, T., Yoshida, M., Nishida, K., Yagisawa, F., Hirooka, S., Miyagishima, S.Y., Misumi, O., Kawano, S., Kuroiwa, T. 2013 Single-membrane-bound peroxisome division revealed by isolation of dynamin-based machinery. Proc. Nati. Acad. Sci. U. S. A., 110, 9583-9588.
Strain(s): 3377 
PubMed: 23696667
DOI: 10.1073/pnas.1303483110
Inaba, N., Watanabe, T., Sakami, T., Nishi, H., Tahara, Y., Imai, I. 2014 Temporal and spatial distribution of algicidal and growth-inhibiting bacteria in the coastal sea of southwest Japan. J. Plankton Res., 36, 388-397.
Keywords: algicidal bacteria; growth-inhibiting bacteria; particle-associated bacteria; free-living bacteria; harmful algal blooms
Strain(s): 1 
DOI: 10.1093/plankt/fbt119
Inada, Y. 1958 Stimulatory and inhibitory effect of light on the nitrate assimilation by Chlorella. J. Gen. Appl. Microbiol., 4, 153-162.
Strain(s): 2170 
Inagaki, Y., Ehara, M., Watanabe, K. I., Hayashi-Ishimaru, Y., Ohama, T. 1998 Directionally evolving genetic code: the UGA codon from stop to tryptophan in mitochondria. J. Mol. Evol., 47, 378-384.
Keywords: COXI phylogenetic tree; UGA codon; deviant genetic code; directional codon reassignment
Strain(s): 12227274 
Inagaki, Y., Hayashi-Ishimaru, Y., Ehara, M., Igarashi, I., Ohama, T. 1997 Algae or protozoa: phylogenetic position of euglenophytes and dinoflagellates as inferred from mitochondrial sequences. J. Mol. Evol., 45, 295-300.
Keywords: mitochondrial COXI gene; Dinoflagellata; Apicomplexa; Kinetoplastida; Euglenophyta; endosymbiosis; genetic code; malarian circle
Strain(s): 12 
Inamori, Y., Ohno, Y., Kaya, K., Watanabe, M. M., Sudo, R. 1990 Studies on the removal and decomposition of Microcystis viridis toxic substance in the bio-film reactor. Jpn. J. Water Poll. Res., 13, 525-530 (in Japanese with English summary).
Keywords: Microcystis viridis; toxic substance cyanoviridin; bio-film reactor; hydraulic retention time
Strain(s): 102 
Inamura, E., Katayama, T., Taguchi, S. 2017 Absorption of low-dose ultraviolet radiation by mycosporine-like amino acids induced by the dinoflagellate Prorocentrum micans. Plankton Benthos Res., 12, 15-24.
Keywords: mycosporine-glycine; palythene; palythine; porphyra-334; shinorine
Strain(s): 218 
DOI: 10.3800/pbr.12.15
Inoue, Y., Hata, T., Kawai, S., Okamura,H., Nishida, T. 2010 Elimination and detoxification of triclosan by manganese peroxidase from white rot fungus. J. Hazard. Mater., 180, 764-767.
Keywords: Triclosan; Bacterial growth inhibition; Algal growth inhibition; Manganese peroxidase; Ligninolytic enzymes; White rot fungi
Strain(s): 35 
Ioki, M., Ohkoshi, M., Nakajima, N., Nakahira-Yanaka, Y., Watanabe, M. M. 2012 Isolation of herbicide-resistant mutants of Botryococcus braunii. Biores. Technol., 109, 300-303.
Keywords: Botryococcus braunii; Paraquat; Methyl viologen; Basta; Glufosinate
Strain(s): 351192272302235 
DOI: 10.1016/j.biortech.2011.07.101
Isaka, N., Kawai-Toyooka, H., Matsuzaki, R., Nakada, T., Nozaki, H. 2012 Description of two new monoecious species of Volvox sect. Volvox (Volvocaceae, Chlorophyceae), based on comparative morphology and molecular phylogeny of cultured material. J. Phycol., 48, 759-767.
Keywords: Chlorophyceae; cultures; molecular phylogeny; morphology; taxonomy; Volvocaceae; Volvox ferrisii sp. nov.; Volvox kirkiorum sp. nov.; Volvox sect. Volvox
Strain(s): 54327362737273827392740 
Iseki, M., Matsunaga, S., Murakami, A., Ohno, K., Shiga, K., Yoshida, K., Sugai, M., Takahashi, T., Hori, T., Watanabe, M. 2002 A blue-light-activated adenylyl cyclase mediates photoavoidance in Euglena gracilis. Nature, 415, 1047-1051.
Strain(s): 48 
PubMed: 11875575
DOI: 10.1038/4151047a
Ishibashi, Y., Ichiyanagi, J., Gotoh, M., Konno, H. 1993 Culture conditions and characteristics of offensive odor-producing substance in the genus Uroglena [Uroglena zoku no baiyôjôken to syûkibusshitsu tokusei]. In Proceedings of 27th Annual Meeting of Japan Society on Water Environment [Dai 27kai Nippon Mizukankyô-Gakkai Nenkaikôensyû], p. 282-283 (in Japanese with English title).
Strain(s): 395 
Ishibashi, Y., Oikawa, E., Honda, H., Adachi, T., Nakatochi, M. 2007 Analyses of growth factors of taste and odor producing algae by a fuzzy neural network. Environ. Eng. Res. [Kankyô-kôgaku Kenkyû Ronbunshû], 44, 255-263 (in Japanese with English summary).
Keywords: musty odor; Phormidium tenue; Uroglena americana; fuzzy neural network; wind speed
Strain(s): 512 
Ishida, K., Matsuda, H., Murakami, M. 1998 Four new microginins, linear peptides from the cyanobacterium Microcystis aeruginosa. Tetrahedron, 54, 13475-13484.
Strain(s): 99299 
Ishida, K., Matsuda, H., Murakami, M., Yamaguchi, K. 1996 The absolute stereochemistry of micropeptin 90. Tetrahedron Letters, 37, 9225-9226.
Strain(s): 90 
Ishida, K., Matsuda, H., Murakami, M., Yamaguchi, K. 1997 Microginins 299-A and -B, leucine aminopeptidase inhibitors from the cyanobacterium Microcystis aeruginosa (NIES-299). Tetrahedron, 53, 10281-10288.
Strain(s): 299 
Ishida, K., Matsuda, H., Murakami, M., Yamaguchi, K. 1997 Micropeptins 478-A and -B, plasmin inhibitors from the cyanobacterium Microcystis aeruginosa. J. Nat. Prod., 60, 184-187.
Strain(s): 478 
Ishida, K., Murakami, M. 2000 Kasumigamide, an antialgal peptide from the cyanobacterium Microcystis aeruginosa. J. Org. Chem., 65, 5898-5900.
Strain(s): 87 
Ishida, K., Murakami, M., Matsuda, H., Yamaguchi, K. 1995 Micropeptin 90, a plasmin and trypsin inhibitor from the blue-green alga Microcystis aeruginosa (NIES-90). Tetrahedron Letters, 36, 3535-3538.
Strain(s): 90 
Ishida, K., Nakagawa, H., Murakami, M. 2000 Microcyclamide, a cytotoxic cyclic hexapeptide from the cyanobacterium Microcystis aeruginosa. J. Nat. Prod., 63, 1315-1317.
Strain(s): 298 
Ishida, K., Okita, Y., Matsuda, H., Okino, T., Murakami, M. 1999 Aeruginosins, protease inhibitors from the cyanobacterium Microcystis aeruginosa. Tetrahedron, 55, 10971-10988.
Strain(s): 8998298 
Ishida, K., Welker, M., Christiansen, G., Cadel-Six, S., Bouchier, C., Dittmann, E., Hertweck, C., de Marsac, N. T. 2009 Plasticity and evolution of aeruginosin biosynthesis in Cyanobacteria. Appl. Environ. Microbiol., 75, 2017-2026.
Strain(s): 98843 
Ishida, T., Watanabe, M. M., Sugiyama, J., Yokota, A. 2001 Evidence for polyphyletic origin of the members of the orders of Oscillatoriales and Pleurocapsales as determined by 16S rDNA analysis. FEMS Microbiol. Lett., 201, 79-82.
Keywords: cyanobacterium; Pleurocapsales; 16S rDNA; phylogeny
Strain(s): 272085102116211821192128 
Ishida, T., Yokota, A., Sugiyama, J. 1997 Phylogenetic relationships of filamentous cyanobacterial taxa inferred from 16S rRNA sequence divergence. J. Gen. Appl. Microbiol., 43, 237-241.
Keywords: filamentous cyanobacteria; molecular phylogeny; Oscillatoriales; 16S rRNA
Strain(s): 272085102116211821192128 
Ishikawa, I. S. 1990 Characteristic structures of Spirulina trichome involved in gliding movement. Plant Morphol., 2, 7-14.
Keywords: gliding movement; Spirulina; thylakoid; trichome; motive force
Strain(s): 27 
Ishikawa, M., Takahashi, F., Nozaki, H., Nagasato, C., Motomura, T., Kataoka, H. 2009 Distribution and phylogeny of the blue light receptors aureochromes in eukaryotes. Planta, 230, 543-552.
Keywords: aureochrome (AUREO); BL receptor; bZIP; LOV; stramenopiles
Strain(s): 12801017 
Ishimitsu, M., Chihara, M. 1984 Four species of Cryptomonas (Class Cryptophyceae) in Japan. J. Jpn. Bot., 59, 161-169.
Strain(s): 274275276277278279280281282344345346347348 
Ishitsuka, M. O., Kusumi, T., Kakisawa, H., Kaya, K., Watanabe, M. M. 1990 Microviridin: a novel tricyclic depsipeptide from the toxic cyanobacterium Microcystis viridis. J. Am. Chem. Soc., 112, 8180-8182.
Strain(s): 102 
Isono, T., Katoh, T. 1982 Cylindrical phycobilisomes from a blue-green alga, Anabaena variabilis. Plant Cell Physiol., 23, 1347-1355.
Keywords: blue-green alga (Anabaena variabilis); electron micrograph; cylindrical phycobilisomes; phycobilisomes; protein assembly
Strain(s): 2093 
Isono, T., Katoh, T. 1983 Subparticles of Anabaena phycobilisomes. 1. Reconstruction of allophycocyanin cores and entire phycobilisomes. Plant Cell Physiol., 24, 357-368.
Keywords: allophycocyanin (assembly); blue-green algae (Anabaena variabilis); in vitro association (phycobilisome); phycobilisome core; phycobilisome; protein assembly
Strain(s): 2093 
Issarapayup, K., Powtongsook, S., Pavasant, P. 2009 Flat panel airlift photobioreactors for cultivation of vegetative cells of microalga Haematococcus pluvialis. J. Biotechnol., 142, 227-232.
Keywords: airlift photobioreactor; vegetative cells; astaxanthin; bioprocess design; microalga
Strain(s): 144 
Issarapayup, K., Powtongsook, S., Pavasant, P. 2011 Economical review of Haematococcus pluvialis culture in flat-panel airlift photobioreactors. Aquac. Eng., 44, 65-71.
Keywords: Airlift photobioreactor; Microalga; Economical analysis; Bioprocess design
Strain(s): 144 
Itoh, Y., Murakami, H., Ikeda, R. 1993 Studies on the growth limiting nutrients of red tide plankton in the tidal area [Kanchô-iki ni okeru akashio gen'in sôrui no zôshoku yokusei inshi no suitei]. Proc. Coast. Engineering, JSCE [Kaigan Kôgaku Ronbun-shû], 40, 1001-1005 (in Japanese without English title).
Strain(s): 323 
Itou, Y., Ishida, K., Shin, H. J., Murakami, M. 1999 Oscillapeptins A to F, serine protease inhibitors from the three strains of Oscillatoria agardhii. Tetrahedron, 55, 6871-6882.
Strain(s): 205596 
Itou, Y., Okada, S., Murakami, M. 2001 Two structural isomeric siderophores from the freshwater cyanobacterium Anabaena cylindrica (NIES-19). Tetrahedron, 57, 9093-9099.
Keywords: iron; sidenophore; cyanobacteria; Anabaena cylindrica; CAS
Strain(s): 19 
Itou, Y., Suzuki, S., Ishida, K., Murakami, M. 1999 Anabaenopeptins G and H, potent carboxypeptidase A inhibitors from the cyanobacterium Oscillatoria agardhii (NIES-595). Bioorg. Med. Chem. Lett., 9, 1243-1246.
Strain(s): 595 
Iwahori, K., Miyata, N., Umeda, Y., Aoyama, K., Shimoi, K., Kinae, N. 1999 Applicability of environmental microorganisms to alkaline single cell gel electrophoresis (comet) assay. Jpn. J. Water Treat. Biol., 35, 261-270 (in Japanese with English summary).
Keywords: comet assay; DNA damage; environmental microorganisms; Euglena gracilis; cell lysis; unwinding; electrophoresis; SDS; γ-irradiation
Strain(s): 49403 
Iwai, M., Hori, K., Sasaki-Sekimoto, Y., Shimojima, M., Ohta, H. 2015 Manipulation of oil synthesis in Nannochloropsis strain NIES-2145 with a phosphorus starvation–inducible promoter from Chlamydomonas reinhardtii. Front. Microbiol. 6, 912 (article ID).
Keywords: algae; Nannochloropsis; phosphorus starvation; inducible promoter; triacylglycerol
Strain(s): 2145 
DOI: 10.3389/fmicb.2015.00912
Iwami, N., Inamori, Y., Sugiura, N., Matsumura, M. 1996 Degradation characteris-tics of toxic Microcystis viridis by Mastigophora, Monas guttula using aquatic large scale microcosm. J. Jpn. Soc. Wat. Environ. 19, 140-146.
Keywords: degradation; Microcystis; microflagellate; toxic substance; aquatic large scale microcosm
Strain(s): 102 
Iwamoto, K., Ikawa, T. 2000 A novel glycolate oxidase requiring flavin mononucleotide as the cofactor in the prasinophycean alga Mesostigma viride. Plant Cell Physiol., 41, 988-991.
Keywords: flavin mononucleotide (FMN)-requiring enzyme; glycolate metabolism; glycolate oxidase; glycolate-oxidizing enzyme; Mesostigma viride; Prasinophyceae
Strain(s): 296 
Iwamoto, K., Shiraiwa, Y. 2003 Characterization of NADH nitrate reductase from the coccolithophorid Emiliania huxleyi (Lohman) Hay & Mohler (Haptophyceae). Mar. Biotechnol., 5, 20-26.
Keywords: coccolithophorid; Emiliania huxleyi; enzyme purification; nitrate reductase; nitrate utilization
Strain(s): 837 
Iwamoto, K., Shiraiwa, Y. 2012 Characterization of intracellular iodine accumulation by iodine-tolerant microalgae. Procedia Environ. Sco., 15, 34-42.
Keywords: growth stimulation; growth inhibition; haptophyte; iodine; iodine accumulation
Strain(s): 377837838 
Iwamura, T. 1960 Distribution of nucleic acids among subcellular fractions of Chlorella. Biochim. Biophys. Acta, 42, 161-163.
Strain(s): 2170 
Iwamura, T. 1962 Cellular distributions and properties of nucleic acid species in Chlorella. In Symposium in Institute of Applied Microbiology, University of Tokyo, Vol. III, p. 259-278 (in Japanese).
Strain(s): 2170 
Iwamura, T. 1962 Characterization of the turnover of chloroplast deoxyribonucleic acid in Chlorella. Biochim. Biophys. Acta, 61, 472-474.
Strain(s): 2170 
Iwamura, T. 1965 Change of nucleic acid content in Chlorella cells during the course of their life-cycle. J. Biochem., 42, 575-589.
Strain(s): 2170 
Iwamura, T. 1966 Nucleic acid in chloroplasts and metabolic DNA. Progr. Nucl. Acid Res. Mol. Biol., 5, 133-155.
Strain(s): 2170 
Iwamura, T. 1970 Phylogenetic aspects of algal biochemistry (1) DNA species in algae. Ann. NY Acad. Sci., 175, 488-510.
Strain(s): 2170 
Iwamura, T. 1987 The feasibility of Chlorella as the exchanger of CO2 for O2 and the food resources in the space station. In Biological Sciences in Space 1986, Eds. by Watanabe, S. et al., MYU Research, Tokyo, p. 257-264.
Strain(s): 2170 
Iwamura, T., Aoshima, J. 1984 Multiplication of chloroplast DNA. Protein, Nucleic Acid and Enzyme, 29, 191-201 (in Japanese).
Strain(s): 2170 
Iwamura, T., Hase, E., Moriyama, Y., Tamiya, H. 1955 Life cycle of the green alga Chlorella with special reference to the protein and nucleic acids contents of cells in successive formative stages. In A.I. Virtanen homage volume, Biochemistry of Nitrogen, Helsinki, p. 89-102.
Strain(s): 2170 
Iwamura, T., Kanazawa, T., Kanazawa, K. 1963 Nucleotide metabolism in Chlorella. I. Chromatographic analysis of the acid-soluble nucleotides. Plant Cell Physiol., Spec. Iss. (Studies on Microalgae and Photosynthetic Bacteria), 577-586.
Strain(s): 2170 
Iwamura, T., Kanazawa, T., Kanazawa, K. 1963 Nucleotide metabolism in Chlorella. II. Quantitative changes in component-nucleotides of the acid-soluble fraction of algal cells during their life-cycle. Plant Cell Physiol., Spec. Iss. (Studies on Microalgae and Photosynthetic Bacteria), 587-596.
Strain(s): 2170 
Iwamura, T., Katoh, K., Nishimura, T. 1982 Semi-conservative replication of chloroplast DNA in synchronized Chlorella. Cell Struct. Funct., 7, 71-86.
Strain(s): 2170 
Iwamura, T., Kunieda, R. Kuwashima, S., Nishimura, T. 1988 Inhibition of growth of Chlorella by various drugs. J. Nat. Sci. Nagoya Economics Univ., Ichimura Gakuen Junior Coll., 23, 1-11.
Strain(s): 2170 
Iwamura, T., Kuwashima, S. 1964 Formation of adenosine 5-triphosphate from polyphosphate by a cell-free extract from Chlorella. J. Gen. Appl. Microbiol., 10, 83-86.
Strain(s): 2170 
Iwamura, T., Kuwashima, S. 1964 Further observations on the deoxyribonucleic acid species in Chlorella showing light-dependent metabolic turnover. Biochim. Biophys. Acta, 82, 678-679.
Strain(s): 2170 
Iwamura, T., Kuwashima, S. 1969 Two DNA species in chloroplasts of Chlorella. Biochim. Biophys. Acta, 174, 330-339.
Strain(s): 2170 
DOI: 10.1016/0005-2787(69)90258-5
Iwamura, T., Muto, N. 1964 Incorporation of 5-bromouracil into the two kinds of DNA in Chlorella. Plant Cell Physiol., 5, 359-360.
Strain(s): 2170 
Iwamura, T., Myers, J. 1959 Changes in the content and distribution of the nucleic acid bases in Chlorella during the life cycle. Arch. Biochem. Biophys., 84, 267-277.
Strain(s): 2170 
Iwamura, T., Nagai, H., Ichimura, S. 1970 Improved methods for determining contents of chlorophyll, protein, ribonucleic acid, and deoxyribonucleic acid in planktonic populations. Int. Revue Ges. Hydrobiol., 55, 131-147.
Strain(s): 2170 
DOI: 10.1002/iroh.19700550106
Iwamura, T., Takeda, Y., Nishimura, T. 1990 A c-myc like DNA fragment in Chlorella. J. Nat. Sci. Nagoya Economics Univ., Ichimura Gakuen Junior Coll., 24, 23-40 (in Japanese).
Strain(s): 2170 
Iwasaka, M., Mizukawa, Y. 2014 Magneto-optical properties of biogenic photonic crystals in algae. J. Appl. Phys., 115, 17B501 (article ID).
Strain(s): 13041313 
DOI: 10.1063/1.4861556
Iwasaki, H., Sasada, K. 1969 Studies on the red tide dinoflagellates - II. On Heterosigma inlandica appeared in Gokasho Bay, Shima Peninsula. Bull. Jpn. Soc. Sci. Fish., 35, 943-947 (in Japanese with English summary).
Strain(s): 5 
Iwase, S., Abe, T. 2010 Identification and change in concentration of musty-odor compounds during frowth in blue-green algae. J. Sch. Marine Sci. Tech., Tokai Univ., 8, 27-33.
Strain(s): 5122119 
Iwata, H., Haji, A., Hashimoto, K., Mitsuyanagi, K., Kanegae, Y. 1991 Methods for producing heat-unsoluble β-1,3-glucan [Kanetsu gyôkosei β-1,3-glucan no seizôhô]. In Nippon-koku Tokkyo-chô (JP), Kôkai Tokkyo Kôhô (A), Hei3-163102, 5 pp. (in Japanese without English title).
Strain(s): 474849 
Iwataki, M., Botes, L., Sawaguchi, T., Sekiguchi, K., Fukuyo, Y. 2003 Cellular and body scale structure of Heterocapsa ovata sp. nov. and Heterocapsa orientalis sp. nov. (Peridiniales, Dinophyceae). Phycologia, 42, 629-637.
Strain(s): 472 
DOI: 10.2216/i0031-8884-42-6-629.1
Iwataki, M., Hansen, G., Sawaguchi, T., Hiroishi, S., Fukuyo, Y. 2004 Investigations of body scales in twelve Heterocapsa species (Peridiniales, Dinophyceae), including a new species H. pseudotriquetra sp. nov. Phycologia, 43, 394-403.
Strain(s): 420472473614 
Izumi, Y., Aikawa, S., Matsuda, F., Hasunuma, T., Kondo, A. 2013 Aqueous size-exclusion chromatographic method for the quantification of cyanobacterial native glycogen. J. Chromatogr. B, 930, 90-97.
Keywords: Size-exclusion chromatography; Native glycogen; Qantitative analysis; Polyhydroxy methacrylate; Microalgae; Arthrospira platensis
Strain(s): 39 
DOI: 10.1016/j.jchromb.2013.04.037
Jang, M. H., Ha, K., Lucas, M. C., Joo, G. J., Takamura, N. 2004 Changes in microcystin production by Microcystis aeruginosa exposed to phytoplanktivorous and omnivorous fish. Aquat. Toxicol., 68, 51-59.
Keywords: Microcystis aeruginosa; microcystin; fish-induced defence; chemical cues; Hypophthalmichthys molitrix; Carassius gibelio langsdorfi
Strain(s): 4499 
PubMed: 15110469
DOI: 10.1016/j.aquatox.2004.02.002
Jang, M.-H., Ha, K., Jung, J.-M., Lee, Y.-J., Takamura, N. 2006 Increased microcystin production of Microcystis aeruginosa by indirect exposure of nontoxic cyanobacteria: potential role in the development. Bull. Environ. Contam. Toxicol., 76, 957-962.
Strain(s): 74 
Jang, M.-H., Ha, K., Takamura, N. 2007 Reciprocal allelopathic responses between toxic cyanobacteria (Microcystis aeruginosa) and duckweed (Lemna japonica). Toxicon, 49, 727-733.
Keywords: Microcystis aeruginosa Kützing; Lemna japonica Landolg; microcystin; allelochemicals; reciprocal allelopathic responses; growth; eutrophic waters
Strain(s): 107 
Jang, M.-H., Jung, J.-M., Takamura, N. 2007 Changes in microcystin production in cyanobacteria exposed to zooplankton at different population densities and infochemical concentrations. Limnol. Oceanogr., 52, 1454-1466.
Strain(s): 98107 
Jang, M.-H., Jung, J.-M., Takamura, N. 2008 Microcystin production by Microcystis aeruginosa exposed to different stages of herbivorous zooplankton. Toxicon, 51, 882-889.
Keywords: Microcystis aeruginosa; induced defense; different stages of zooplankton; infochemicals; intracellular microcystin; extracellular microcystin
Strain(s): 98107 
Jang, M-H., Ha, K., Joo, G-J., Takamura, N. 2003 Toxin production of cyanobacteria is increased by exposure to zooplankton. Freshw. Biol., 48, 1540-1550.
Keywords: info-chemicals; microcystin production; Microcystis aeruginosa; zooplankton; zooplankton culture media filtrate
Strain(s): 448799 
Johnson, L. M., Hoagland, K. D., Gretz, M. R. 1995 Effects of bromide and iodine on stalk secretion in the biofouling diatom Achnanthes longipes (Bacillariophyceae). J. Phycol., 31, 401-412.
Keywords: Achnanthes longipes; Bacillariophyceae; biofouling; bromide; diatom; EPS secretion; image analysis; inhibition of adhesion; iodine; Lotus-FITC; stalks
Strain(s): 330 
Jouenne, F., Eikrem, W., Le Gall, F., Johnsen, G., Vaulot, D. 2011 Prasinoderma singularis sp. nov. (Prasinophyceae, Chlorophyta), a solitary coccoid prasinophyte from the South-East Pacific Ocean. Protist, 162, 70-84.
Keywords: binary fission; field emission scanning electron microscopy (FE-SEM); picoplankton; Prasinoderma; Prasinophyceae; taxonomy
Strain(s): 2582 
PubMed: 20674490
DOI: 10.1016/j.protis.2010.04.005
Jung, J.-M., Lee, Y.-J., Park, H.-K., Jung, E.-Y., Joo, G.-J. 2003 The analysis of cyanobacterial neurotoxins by high-performance liquid chromatography-mass spectrometry. Algae, 18, 233-238.
Keywords: anatoxin-a; Aphanizomenon flos-aquae; cyanobacterial toxins; LC-MS; saxitoxin
Strain(s): 81 
DOI: 10.4490/ALGAE.2003.18.3.23
Jung, S. W., Kim, B.-H., Katano, T., Kong, D.-S., Han, M.-S. 2008 Pseudomonas flurescens HYK0210-SK09 offers species-specific biological control of winter algal blooms caused by freshwater diatom Stephanodiscus hantzschii. J. Appl. Microbiol., 105, 186-195.
Keywords: algicidal bacterium; algicidal mechanism; biological control; indoor mesocosm; Pseudomonas fluorescens; Stephanodiscus hantzschii
Strain(s): 1944298 
Kabata, K., Sadakane, H., Miyachi, S., Nagata, K., Hatano, S., Watanabe, T. 1979 Studies on lipid changes during the development of frost hardiness in Chlorella ellipsoidea. J. Fac. Agr., Kyushu Univ., 23, 155-161.
Strain(s): 2170 
Kabata, U., Sadakane, H., Kurose, M., Kobayakawa, A., Watanabe, T., Hatano, S. 1980 Changes in fatty acid composition of membrane fractions during hardening of Chlorella ellipsoidea. J. Fac. Agr., Kyushu Univ., 25, 91-97.
Strain(s): 2170 
Kaeriyama, H., Katsuki, E., Otsubo, M., Yamada, K., Ichimi, K., Tada, K., Harrison, P. J. 2011 Effects of temperature and irradiance on growth of strains belonging to seven Skeletonema species isolated from Dokai Bay, southern Japan. Eur. J. Phycol., 46, 113-124.
Keywords: Dokai Bay; irradiance; physiology; Skeletonema species; specific growth rate; temperature
Strain(s): 2837283828392841284228432844 
DOI: 10.1080/09670262.2011.565128
Kaewpintong, K., Shotipruk, A., Powtongsook, S., Pavasant, P. 2007 Photoautotrophic high-density cultivation of vegetative cells of Haematococcus pluvialis in airlift bioreactor. Biores. Technol., 98, 288-295.
Keywords: Airlift bioreactors; Astaxanthin; Autotrophic; Bioprocess design; Bubble columns; Microalgae
Strain(s): 144 
Kai, A., Yoshii, Y., Nakayama, T., Inouye, I. 2008 Aurearenophyceae classis nova, a new class of Heterokontophyta based on a new marine unicellular alga Aurearena cruciata gen. et sp. nov. inhabiting sandy beaches. Protist, 159, 435-457.
Keywords: flagellar apparatus; Phaeophyceae; Phaeothamniophyceae; pigment composition; Xanthophyceae; phylogeny
Strain(s): 1862186318641865 
DOI: 10.1016/j.protis.2007.12.003
Kajikawa, M., Yamato, K. T., Kohzu, Y., Shoji, S., Sakai, Y., Fukuzawa, H. 2006 A front-end desaturase from the green alga Chlamydomonas reinhardtii produces pinolenic and coniferonic acids by ω13 desaturation. Plant Cell Physiol., 47, 64-73.
Keywords: Chlamydomonas reinhardtii; Δ5-unsaturated bis-methylene-interrupted fatty acids; fatty acid desaturase; Pichia pastoris; tobacco plant
Strain(s): 2235 
Kajiwara, S., Kakizono, T., Saito, T., Kondo, K., Ohtani, T., Nishio, N., Nagai, S., Misawa, N. 1995 Isolation and functional identification of a novel cDNA for astaxanthin biosynthesis from Haematococcus pluvialis, and astaxanthin synthesis in Escherichia coli. Plant Mol. Biol., 29, 343-352.
Keywords: astaxanthin; canthaxanthin; carotenoid; xanthophyll; Haematococcus pluvialis; green alga
Strain(s): 144 
Kakimoto, M., Ishikawa, T., Miyagi, A., Saito, K., Miyazaki, M., Asaeda, T., Yamaguchi, M., Uchiyama, H., Kawai-Yamada, M. 2014 Culture temperature affects gene expression and metabolic pathways in the 2-methylisoborneol-producing cyanobacterium Pseudanabaena galeata. J. Plant Res., 171, 292-300.
Keywords: 2-MIB; Cyanobacteria; Gene expression; Metabolomics; Temperature-induction
Strain(s): 512 
DOI: 10.1016/j.jplph.2013.09.005
Kakizono, T., Kobayashi, M., Nagai, S. 1992 Effect of carbon/nitrogen ratio on encystment accompanied with astaxanthin formation in a green alga, Haematococcus pluvialis. J. Ferment. Bioeng., 74, 403-405.
Strain(s): 144 
Kakuta, S., Suzaki, T. 2007 Ca2+- and glycoconjugates-dependent prey capture in the heliozoan Actinophrys sol. Eur. J. Protistol., 44, 163-167.
Keywords: calium ion influx; Con A; exocytosis; extrusome; glycoprotein; secretory granule
Strain(s): 2497 
PubMed: 18178392
DOI: 10.1016/j.ejop.2007.11.001
Kamata, K., Piao, Z., Suzuki, S., Fujimori, T., Tajiri, W., Nagai, K., Iyoda, T., Yamada, A., Hayakawa, T., Ishiwara, M., Horaguchi, S., Belay, A., Tanaka, T., Takano, K., Hangyo M. 2014 Spirulina-templated metal microcoils with controlled helical structures for THz electromagnetic responses. Sci Rep, 4, 4919 (article ID).
Strain(s): 3946 
DOI: 10.1038/srep04919
Kamaya,Y., Tsuboi, S., Takada, T., Suzuki, K. 2006 Growth stimulation and inhibition effects of 4-hydroxybenzoic acid and some related compounds on the freshwater green alga Pseudokirchneriella subcapitata. Arch. Environ. Contam. Toxicol., 51, 537-541.
Strain(s): 35 
Kamikawa, R., Asai, J., Miyahara, T., Murata, K., Oyama, K., Yoshimatsu, S., Yoshida, T., Sako, Y. 2006 Application of a real-time PCR assay to a comprehensive method of monitoring harmful algae. Mircobes Environ., 21, 163-173.
Keywords: harmful algal bloom (HAB); molecular monitoring; real-time PCR; red tide
Strain(s): 145 
Kamikawa, R., Brown, M. W., Nishimura, Y., Sako, Y., Heiss, A. A., Yubuki, N., Gawryluk, R., Simpson, A. G. B., Roger, A. J., Hashimoto, T., Inagaki, Y. 2013 Parallel re-modeling of EF-1α function: divergent EF-1α genes co-occur with EFL genes in diverse distantly related eukaryotes. BMC Evol. Biol., 13, 131 (article ID).
Keywords: Diatoms; Differential Gene Loss; EF-1α; EFL; Functional Remodeling; Goniomonas; Pythium; Spizellomyces; Thecamonas
Strain(s): 4175341349137113731374 
Kamikawa, R., Masuda, I., Oyama, K., Yoshimatsu, S., Sako, Y. 2007 Genetic variation in mitochondrial genes and intergenic spacer region in harmful algae Chattonella species. Fish. Sci., 73, 871-880.
Keywords: Chattonella sp.; cytochrome c oxidase subunit 1 (cox1); cytochrome c oxidase subunit 2 (cox2); genetic diversity; harmful algae; mitochondria
Strain(s): 12385161557558671849 
Kamikawa, R., Sanchez-Perez, G. F., Sako, Y., Roger, A. J., Inagaki, Y. 2009 Expanded phylogenies of canonical and non-canonical types of methionine adenosyltransferase reveal a complex history of these gene families in eukaryotes. Mol. Phylogenet. Evol., 53, 565-570.
Keywords: Methionine adenosyltransferase; Lateral gene transfer; Diaoms; Aureococcus; Haptophytes; Cryptomonads
Strain(s): 1735041753458610451349 
Kamikawa, R., Shiratori, T., Ishida, K-I., Miyashita, H., Roger, A. J. 2016 Group II intron-mediated trans-splicing in the green-rich mitochondrial genome of an enigmatic eukaryote, Diphylleia rotans. Genome Biol. Evol., 8, 458-466.
Keywords: Diphyllatia; introns; mitochondria; inverted repeats; trans-splicing
Strain(s): 3764 
PubMed: 26833505
DOI: 10.1093/gbe/evw011
Kamikawa, R., Tanifuji, G., Kawachi, M., Miyashita, H., Hashimoto, T., Inagaki, Y. 2015 Plastid genome-based phylogeny pinpointed the origin of the green-colored plastid in the dinoflagellate Lepidodinium chlorophorum. Genome Biol. Evol, 7, 1133–1140.
Keywords: genome reduction; Lepidodinium; Pedinophyceae; secondary plastids; plastid replacement
Strain(s): 1868 
PubMed: 25840416
DOI: 10.1093/gbe/evv060
Kamikawa, R., Tanifuji, Ishikawa, G. S., Ishii, K., Matsuno, Y., Onodera, N. T., Ishida, K-I., Hashimoto, T., Miyashita, H., Mayama, S., Inagaki, Y. 2015 Proposal of a Twin-arginine translocator system-mediated constraint against loss of ATP synthase genes from nonphotosynthetic plastid genomes. Mol. Biol. Evol., 32, 2598-2604.
Keywords: apochlorotic diatoms; nonphotosynthetic plastid genome; genome reduction; ATP synthase complex; Twin-arginine translocator
Strain(s): 3581 
PubMed: 26048548
DOI: 10.1093/molbev/msv134
Kamikawa, R., Yabuki, A., Nakayama, T., Ishida, K-I., Hashimoto, T., Inagaki, Y. 2011 Cercozoa comprises both EF-1α-containing and EFL-containing members. Eur. J. Protistol., 47, 24-28.
Keywords: Cercozoa; Elongation factor 1α; Elongation factor-like protein
Strain(s): 2378 
PubMed: 21071191
DOI: 10.1016/j.ejop.2010.08.002
Kamikawa, R., Yubuki, N., Yoshida, M., Taira, M., Nakamura, N., Ishida, K-I., Leander, B. S., Miyashita, H., Hashimoto, T., Mayama, S., Inagaki, Y. 2015 Multiple losses of photosynthesis in Nitzschia (Bacillariophyceae). Phycol. Res., 63, 19-28.
Keywords: apochlorotic diatoms; genetic diversity; large subunit rRNA; molecular phylogenetic analysis; nonphotosynthetic plastids; plastid 16S rRNA
Strain(s): 35773578357935803581 
DOI: 10.1111/pre.12072
Kamiya, A. 1988 Blue light-induced in vivo absorbance changes and in vitro activation of nitrate reductase in a nitrate-starved Chlorella mutant. Plant Cell Physiol., 29, 489-496.
Keywords: blue light effect; Chlorella; light-induced absorbancechange; NADH-nitrate reductase
Strain(s): 2162 
Kamiya, A. 1989 Effects of blue light and ammonia on nitrogen metabolism in colorless mutant of Chlorella. Plant Cell Physiol., 30, 513-521.
Keywords: ammonia effect; blue light effect; Chlorella; glutamine synthetase; nitrate uptake; nitrogen metabolism
Strain(s): 2162 
Kamiya, A., Miyachi, S. 1974 Effects of blue light on respiration and carbon dioxyde fixation in colorless Chlorella mutant cells. Plant Cell Physiol., 15, 927-937.
Strain(s): 2162 
Kamiya, A., Miyachi, S. 1975 Blue light-induced formation of photphoenolpyruvate carboxylase in colorless Chlorella mutant cells. Plant Cell Physiol., 16, 729-736.
Strain(s): 2162 
Kamo, T., Shimogawara, K., Fukuzawa, H., Muto, S., Miyachi, S. 1990 Subunit constitution of carbonic anhydrase from Chlamydomonas reinhardtii. Eur. J. Biochem., 192, 557-562.
Strain(s): 2235 
Kanai, R., Aoki, S., Miyachi, S. 1965 Quantitative separation of inorganic polyphosphates in Chlorella cells. Plant Cell Physiol., 6, 467-473.
Strain(s): 2170 
Kanai, R., Miyachi, S., Miyachi, S. 1963 Light-induced formation and mobilization of polyphosphate "C" in Chlorella cells. Plant Cell Physiol., Spec. Iss. (Studies on Microalgae and Photosynthetic Bacteria), 613-618.
Strain(s): 2170 
Kanazawa, T. 1958 Synchronous culture of Chlorella with special reference of the processes of assimilation of potassium magnesium and iron. J. Gen. Appl. Microbiol., 4, 102-107.
Strain(s): 2170 
Kanazawa, T., Fujita, C., Yuhara, T., Sasa, T. 1958 Mass culture of unicellular algae using "open circulation method". J. Gen. Appl. Microbiol., 4, 135-152.
Strain(s): 2170 
Kanazawa, T., Yanagisawa, T., Tamiya, H. 1966 Aliphatic amines occurring in Chlorella cells and changs of their contents during the life cycle of the alga. Z. Botanik, Festschr. f. E. Bünning, 54, 57-62.
Strain(s): 2170 
Kanda, H., Li, P., Ikehara, T., Yasumoto-Hirose, M. 2012 Lipids extracted from several species of natural blue–green microalgae by dimethyl ether: Extraction yield and properties. Fuel, 95, 88-92.
Keywords: Lipids; Microalgae; Extraction; Dimethyl ether
Strain(s): 5951263 
Kaneko, H., Shimada, A. Hirayama, K. 2004 Short-term algal toxicity test based on phosphate uptake. Wat. Res., 38, 2173-2177.
Keywords: Selenastrum capricornutum; Phosphate uptake; Short-term toxicity test
Strain(s): 35 
Kaneko, H., Yamaguchi, M. 1995 Toxicity evaluation of municipal solid waste incinerator fly ash by algal assay. Reports Facul. Eng. Yamanashi Univ., 46, 84-89 (in Japanese with English summary).
Strain(s): 35 
Kaneko, H., Yamaguchi, M., Ikeda, F. 1996 Toxicity of municipal solid waste incinerator fly ash and the contribution of Cadmium. J. Jpn. Soc. Wat. Environ. [Mizukankyô Gakkai Shi], 19, 563-568 (in Japanese with English summary).
Keywords: MWI fly ash; leachate; algal assay; Daphnia test; hazardous waste
Strain(s): 35 
Kaneko, T., Nakajima, N., Okamoto, S., Suzuki, I., Tanabe, Y., Tamaoki, M., Nakamura, Y., Kasai, F., Watanabe, A., Kawashima, K., Kishida, Y., Ono, A., Shimizu, Y., Takahashi, C., Minami, C., Fujishiro, T., Kohara, M., Katoh, M., Nakazaki, N., Nakayama, S., Yamada, M., Tabata, S., Watanabe, M. M. 2007 Complete genome structure of the bloom-forming toxic cyanobacterium Microcystis aeruginosa NIES-843. DNA Res., 14, 247-256.
Strain(s): 843 
Kanesaki, Y., Imamura, S., Minoda, A., Tanaka, K. 2012 External light conditions and internal cell cycle phases coordinate accumulation of chloroplast and mitochondrial transcripts in the red alga Cyanidioschyzon merolae. DNA Res., 19, 289-303.
Keywords: cell cycle; clustering analysis; Cyanidioschyzon; organelle; transcriptome
Strain(s): 3377 
DOI: 10.1093/dnares/dss013
Kang, B.-H., Tan, S., Ho, K.-K. 1988 Isolation of water-soluble cytochromes from cyanobacteria by adsorption chromatography. Archi. Biochem. Biophys., 263, 387-393.
Strain(s): 44 
Kang, C. B. H., Ho. K.-K. 1991 Characteri-zation of a soluble inorganic pyrophosphatase from Microcystis aeruginosa. Archi. Biochem. Biophys., 289, 281-288.
Strain(s): 44 
Kang, C. D., Lee, J. S., Park, T. H., Sim, S. J. 2005 Comparison of heterotrophic and photoautotrophic induction on astaxanthin production by Haematococcus pluvialis. Appl. Microbiol. Biotechnol., 68, 237-241.
Strain(s): 144 
Kang, C.-D., Sim, S.-J. 2008 Direct extraction of astaxanthin from Haematococcus culture using vegetable oils. Biotechnol. Lett., 30, 441–444.
Keywords: Astaxanthin; Direct extraction; Green process; Haematococcus pluvialis; Vegetable oil
Strain(s): 144 
Kang, Y.-H., Park, C.-S., Han, M.-S. 2012 Pseudomonas aeruginosa UCBPP-PA14 a useful bacterium capable of lysing Microcystis aeruginosa cells and degrading microcystins. J. Appl. Phycol., 24, 1517-1525.
Keywords: Microcystis aeruginosa; Microcystins; Algicidal bacteria; Pseudomonas aeruginosa
Strain(s): 4494298 
Kang, Y-H., Kang, S-K., Park, C-S., Joo, J-H., Lee, J-W., Han, M-S. 2016 Use of lactic acid bacteria as a biological agent against the cyanobacterium Anabaena flos-aquae. J. Appl. Phycol., 28, 1747-1757.
Keywords: Lactic acidbacteria; Cyanobacteriacidalbacteria; Anabaena flos-aquae; Biological control
Strain(s): 7594298 
DOI: 10.1007/s10811-015-0701-7
Karlsson, K. 2005 Liquid chromatotraphy - mass spectrometry in distribution and bioaccumulation studies of toxic cyanopeptides. PhD thesis, Åbo Akademi University, Turku, Finland, 62 pp.
Strain(s): 107 
Kasai, F., Arts, M. T. 1998 The interactive effects of UV-B radiation and a herbicide on uptake and allocation of carbon in two strains of the green alga Scenedesmus. Aquat. Ecol., 31, 261-272.
Keywords: herbicide tolerance; photosynthesis; phytoplankton; simetryn; triazine herbicides; ultraviolet radiation
Strain(s): 802 
Kasai, F., Hanazato, T. 1995 Genetic changes in phytoplankton communities exposed to the herbicide simetryn in outdoor experimental ponds. Arch. Environ. Contam. Toxicol., 28, 154-160.
Strain(s): 797798799800801802 
Kasai, F., Hatakeyama, S. 1993 Herbicide susceptibility in two green algae, Chlorella vulgaris and Selenastrum capricornutum. Chemosphere, 27, 899-904.
Strain(s): 35227 
DOI: 10.1016/0045-6535(93)90019-2
Kasai, F., Hatakeyama, S. 1996 Changes in herbicide susceptibility of algae in a river running through an agricultural region. Ecol. Chem. (St.Petersburg), 5, 292-296.
Keywords: algal community; herbicide; simetryn; pretilachlor; pollution; effects
Strain(s): 803805 
Kasai, F., Ichimura, T. 1986 Morphological variabilities of three closely related mating groups of Closterium ehrenbergii Meneghini (Chlorophyta). J. Phycol., 22, 158-168.
Keywords: cell shape and size; clonal culture; Closterium ehrenbergii; mating group; morphological variability; statistical analysis
Strain(s): 171228229 
Kasai, F., Ichimura, T. 1990 Temperature optima of three closely related mating groups of the Closterium ehrenbergii (Chlorophyta) species complex. Phycologia, 29, 396-402.
Strain(s): 228229 
Kasai, F., Takamura, N., Hatakeyama, S. 1993 Effects of simetryne on growth of various freshwater algal taxa. Environ. Pollut., 79, 77-83.
Strain(s): 3544102137151230231255275280298 
Kashino, Y., Enami, I., Satoh, K., Katoh, S. 1990 Immunological cross-reactivity among corresponding proteins of photosystems I and II from widely divergent photosynthetic organisms. Plant Cell Physiol., 31, 479-488.
Keywords: antiserum; cross-reactivity; immunoblotting; photosystem; protein
Strain(s): 209321382235 
Kashiyama Y., Yokoyama A., Kinoshita Y., Shoji S., Miyashiya H., Shiratori T., Suga H., Ishikawa K., Ishikawa A., Inouye I., Ishida K., Fujinuma D., Aoki K., Kobayashi M., Nomoto S., Mizoguchi T., Tamiaki H. 2012 Ubiquity and quantitative significance of detoxification catabolism of chlorophyll associated with protistan herbivory. Proc. Nati. Acad. Sci. U. S. A., 109, 17328-17335.
Keywords: phototoxicity of chlorophylls; microbial herbivory; phagocytosis; biodiversity of eukaryotes; microbial loop
Strain(s): 281 
PubMed: 22949677
DOI: 10.1073/pnas.1207347109
Kataoka, T., Homma, T., Nakano, S., Hodoki, Y., Ohbayashi, K., Kondo, R. 2013 PCR primers for selective detection of intra-species variations in the bloom-forming cyanobacterium, Microcystis. Harmful Algae, 23, 46-54.
Keywords: Microcystis aeruginosa; Quantitative PCR; 16S-23S rDNA ITS fegion; Selective detection; Intra-species variation
Strain(s): 4487909810210711111229860410621070 
Kato, A., Morita, N., Hiratsuka, T., Suda, S. 2009 Recent introduction of a freshwater red alga Chantransia macrospora (Batrachospermales, Rhodophyta) to Okinawa, Japan. Aquat. Invasions, 4, 567-574.
Keywords: Audouinella; Batrachospermum; Chantransia macrospora; freshwater algae; introduced species; macroalgae
Strain(s): 2636 
Kato, A., Obokata, J., Sasaki, K. 1981 Mating type interaction in Closterium peracerosum-strigosum-littorale: mating induced protoplast release. Plant Cell Physiol., 22, 1215-1222.
Keywords: Closterium peracerosum-strigosum-littorale; conjugation; disruped cell; mating type interaction; protoplast release
Strain(s): 6465 
Kato, A., Ohmura, K., Kanazawa, H., Sasaki, K. 1983 Natural and artificial production of protoplasts from heterothallic and homothallic Closterium. J. Fac. Sci., Hokkaido Univ., Ser. V (Bot.), 13, 7-15.
Strain(s): 6465 
Kato, A., Sasaki, K. 1983 Effects of tunica-mycin on sexual reproduction in heterothallic strains of Closterium. J. Fac. Sci., Hokkaido Univ., Ser. V (Bot.), 13, 1-6.
Strain(s): 6465 
Kato, S., Higuchi, S., Kondo, Y., Kitano, S., Nozaki, H., Tanaka, J. 2005 Rediscovery of the wild-extinct species Nitellopsis obtusa (Charales) in Lake Kawaguchi, Japan. J. Jpn. Bot., 80, 84-91.
Keywords: Charales; Nitellopsis; rbcL gene; rediscovery; wild-extinct species
Strain(s): 1638 
Kato, S., Sakayama, H., Sano, S., Kasai, F., Watanabe, M. M., Tanaka, J., Nozaki, H. 2008 Morphological variation and intraspecific phylogeny of the ubiquitous species Chara braunii (Charales, Charophyceae) in Japan. Phycologia, 47, 191-202.
Keywords: aquatic habitat; Chara braunii; Charales; Charophyceae; intergenic spacer region; intraspecific phylogeny; morphological variation, rbcL gene
Strain(s): 15861587158815891590159115931604 
Kato, T., Watanabe, M. F., Watanabe M. 1991 Allozyme divergence in Microcystis (Cyanophyceae) and its taxonomic inference. Algol. Stud., 64, 129-140.
Keywords: cyanophytes/cyanobacteria; Microcystis; allozyme divergence; allozyme genotype; allozyme study; cell size; molecular taxonomy
Strain(s): 10551058106110631064106710681070107410771079108110841086109010911093109510971098 
Kato, T., Watanabe, M. F., Watanabe, M., Hara, Y. 1991 Allozyme genotype and toxin omposition of the Microcystis strains from Lake Okutama-ko (1). Bull. Natn. Sci. Mus., Tokyo, Ser. B 17, 1-4.
Strain(s): 11401141114511521159116011611163 
Kato, Y., Imamura, N., 2008 Effect of calcium ion on uptake of amino acids by symbiotic Chlorella F36-ZK isolated from Japanese Paramecium bursaria. Plant Sci., 174, 88-96.
Keywords: Paramecium bursaria; Chlorella; Calcium; Divalent cation; Amino acid transport; Symbiosis
Strain(s): 22721572540 
Kato, Y., Ueno, S., Imamura, N. 2006 Studies on the nitrogen utilization of endosymbiotic algae isolated from Japanese Paramecium bursaria. Plant Sci., 170, 481-486.
Keywords: Endosymbiont; Paramecium bursaria; Nitrogen utilization; Chlorella
Strain(s): 22725402541 
Katoh, H., Furukawa, J., Tomita-Yokotani, K. and Nishi 2012 Isolation and purification of an axenic diazotrophic drought-tolerant cyanobacterium, Nostoc commune, from natural cyanobacterial crusts and its utilization for field research on soils polluted with radioisotopes. Biochim. Biophys. Acta, 18, 1499-1505.
Keywords: Cyanobacterium; Nostoc commune; Desiccation; Radiation; Space agriculture
Strain(s): 2114 
DOI: 10.1016/j.bbabio.2012.02.039
Katoh, H., Shiga, S., Nakahira, Y., Ohmori, M. 2003 Isolation and characterization of drought-tolerant cyanobacterium Nostoc sp. HK-01. Microbes. Environ., 18, 82-88.
Keywords: cyanobacterium; drought-tolerance; hormogonia; Nostoc
Strain(s): 2109 
Katoh, T., Hirokawa, T., Miyachi, S. 1958 Effect of pre-illumination upon the Hill reaction in Chlorella cells. J. Biochem., 45, 907-912.
Strain(s): 2170 
Phylogenetic analysis of NAP, an unconventional actin of the Volvocales. 2015 Phylogenetic analysis of NAP, an unconventional actin of the Volvocales. Plant Syst. Evol., 301, 1725-1733.
Keywords: Volvocales; Divergent actin
Strain(s): 3515465763374 
DOI: 10.1007/s00606-014-1187-5
Kato-Minoura, T., Okumura, M., Hirono, M., Kamiya, R. 2003 A novel family of unconventional actins in Volvocalean algae. J. Mol. Evol., 57, 555-561.
Keywords: Chlamydomonas; phylogeny; Volvocales
Strain(s): 158351546 
Katsuda, T., Lababpour, A., Shimahara, K., Katoh, S. 2004 Astaxanthin production by Haematococcus pluvialis under illumination with LEDs. Enzyme Microb. Technol., 35, 81-86.
Keywords: astaxanthin; light emitting diode; wavelength; accumulation of astaxanthin
Strain(s): 144 
Katsuda, T., Shimahara, K., Shiraishi, H., Yamagami, K., Ranjbar, R., Katoh, S. 2006 Effect of flashing light from blue light emitting diodes on cell growth and astaxanthin production of Haematococcus pluvialis. J. Biosci. Bioeng., 102, 442-446.
Keywords: flashing light; blue light emitting diode; astaxanthin; Haematococcus pluvialis
Strain(s): 144 
Katsuda, T., Shiraishi, H., Ishizu, N., Ranjbar, R., Katoh, S. 2008 Effect of light intensity and frequency of flashing light from blue light emitting diodes on astaxanthin production by Haematococcus pluvialis. J. Biosci. Bioeng., 105, 216-220.
Keywords: flashing light; blue light emitting diode; light intensity; astaxanthin; Haematococcus pluvialis
Strain(s): 144 
Katsumata, M., Koike, T., Nishikawa, M., Kazumura, K., Tsuchiya, H. 2006 Rapid ecotoxicological bioassay using delayed fluorescence in the green alga Pseudokirchneriella subcapitata. Wat. Res., 40, 3393-3400.
Keywords: Delayed fluorescence; Algal growth inhibition test; Pseudokirchneriella subcapitata; Simazine (CAT); 3,5-dichlorophenol (3,5-DCP)
Strain(s): 35 
Kawachi, M., Kataoka, T., Sato, M., Noël, M.-H., Kuwata, A., Demura, M., Yamaguchi, H. 2016 Application of cryopreservation to genetic analyses of a photosynthetic picoeukaryote community. Gene, 576, 708-716.
Keywords: 18S rRNA gene; 454 pyros equencing; Cryopreservation; Photosynthetic picoeukaryotes
Strain(s): 76519662842 
PubMed: 26506442
DOI: 10.1016/j.gene.2015.10.033
Kawafune, K., Hongoh, Y., Hamaji, T., Nozaki, H. 2012 Molecular identification of rickettsial endosymbionts in the non-phagotrophic Volvocalean green algae. PLoS One, 7, e31749 (article ID).
Strain(s): 577 
PubMed: 22363720
DOI: 10.1371/journal.pone.0031749
Kawafune, K., Sato, M., Toyooka, K., Nozaki, H. 2013 Ultrastructure of the rickettsial endosymbiont "MIDORIKO" in the green alga Carteria cerasiformis as revealed by high-pressure freezing and freeze-substitution fixation. Protoplasma, 250, 949-953.
Keywords: Transmission electron microscopy; High-pressure freezing and freeze-substitution fixation; Rickettsiaceae; Endosymbiont; Carteria cerasiformis
Strain(s): 424426 
DOI: 10.1007/s00709-012-0469-
Kawahara, K., Sagehashi, M., Fujii, T., Fujita, H., Hu, H.-Y., Sakoda, A. 2011 Potential of a green alga Botryococcus braunii for simultaneous water purification and biofuel production under open-air condition. J. Water Environ. Technol., 9, 29-37.
Keywords: biofuel production; Botryococcus braunii; Microcystis aeruginosa; water purification
Strain(s): 878361090 
Kawahata, C., Yamamuro, M., Shiraiwa, Y. 2013 Changes in alkaline band formation and calcification of corticated charophyte Chara globularis. SpringerPlus, 2, 85 (article ID).
Keywords: Chara corallina; Chara globularis; Alkaline band; Acid band; SEM
Strain(s): 1585 
Kawai, H., Inouye, I. 1989 Flagellar autofluorescence in forty-four chloraphyll c-containig algae. Phycologia, 28, 222-227.
Strain(s): 515161 
Kawai, H., Maeba, S., Sasaki, H., Okuda, K., Henry, E. C. 2003 Schizocladia ischiensis: a new filamentous marine chromophyte belonging to a new class, Schizocladiophyceae. Protist, 154, 211-228.
Strain(s): 1044 
PubMed: 13677449
DOI: 10.1078/143446103322166518
Kawanobe, K. 1990 A report in the completion of the research work [Chôsa kenkyû syûryô hôkoku]. Unpublished report in Kankyô Hozen Kyôkai, 3 pp. (in Japanese without English title).
Strain(s): 35227 
Kaya, K., Shiraishi, F., Uchida, H., Sano, T. 2011 A novel retinoic acid analogue, 7-hydroxy retinoic acid, isolated from cyanobacteria. Biochim. Biophys. Acta, 1810, 414-419.
Keywords: 7-hydroxy retinoic acid; RAR agonistic activity; cyanobacteria; UV stability
Strain(s): 444546512610931 
DOI: 10.1016/j.bbagen.2010.11.009
Kaya, K., Watanabe, M. M. 1990 Microcystin composition of an axenic clonal strain of Microcystis viridis and Microcystis viridis-containing waterblooms in Japanese freshwaters. J. Appl. Phycol., 2, 173-178.
Keywords: axenic Microcystis viridis; microcystin; toxic waterbloom; Japanese lakes
Strain(s): 102 
Kayano, K., Saruwatari, K., Kogure, T., Shiraiwa, Y. 2011 Effect of coccolith polysaccharides isolated from the coccolithophorid, Emiliania huxleyi, on calcite crystal formation in in vitro CaCO3 crystallization. Mar. Biotechnol., 13, 83-92.
Keywords: Acid polysaccharide; Biomineralization; Coccolith; Coccolith polysaccharide; Calcium carbonate crystalization; Emiliania huxleyi
Strain(s): 837 
DOI: 10.1007/s10126-010-9272-4
Kayano, K., Shiraiwa, Y. 2009 Physiological regulation of coccolith polysaccharide production by phosphate availability in the coccolithophorid Emiliania huxleyi. Plant Cell Physiol., 50, 1522-1531.
Strain(s): 837 
Keawtawee, T., Fukami, K., Songsangjinda, P., Muangyao, P. 2011 Isolation and characterization of Noctiluca-killing bacteria from a shrimp aquaculture pond in Thailand. Fish. Sci., 77, 657-664.
Keywords: Algicidal bacteria; Noctiluca scintillans; HABs; Shrimp aquacluture
Strain(s): 1 
Keeling, p. J., Palmer, J. D. 2001 Lateral transfer at the gene and subgenic levels in the evolution of eukaryotic enolase. Proc. Nati. Acad. Sci. U. S. A., 98, 10745-10750.
Keywords: phylogeny; protein insertions; apicomplexa; recombination
Strain(s): 484 
PubMed: 11526220
DOI: 10.1073/pnas.191337098
Kessenich, C. R., Ruck, E. C., Schurko, A. M., Wickett, N. J., Alverson, A. J. 2014 Transcriptomic insights into the life history of Bolidophytes, the sister lineage to diatoms. J. Phycol., 50, 977-983.
Keywords: Bolidomonas; diatoms; diplontic; haplodiplontic; life cycle; Parmales; transcriptome
Strain(s): 2682 
Kessler, E., Huss, V. A. R. 1992 Comparative physiology and biochemistry and taxonomic assignment of the Chlorella (Chlorophyceae) strains of the Culture Collection of the University of Texas at Austin. J. Phycol., 28, 550-553.
Keywords: chemotaxonomy; Chlorella; Chlorophyta; UTEX culture collection; utilization for research and biotechnology
Strain(s): 686687215021512160216321692175 
Khan, S. M. M. K., Arikawa, M., Omura, G., Suetomo, Y., Kakuta, S., Suzaki, T. 2003 Axopodial contraction in the heliozoon Raphidiophrys contractilis requires extracellular Ca2+. Zool. Sci., 20, 1367-1372.
Keywords: contraction; microtubules; contractile tubules; heliozoa; calcium
Strain(s): 2498 
Khan, S. M. M. K., Arikawa, M., Suzaki, T. 2005 Toxic effect of heavy metal ions on the axopodia of the heliozoon Raphidiophrys contractilis. Jpn. J. Protozool., 38, 44-45.
Strain(s): 2498 
Khan, S. M. M. K., Yoshimura, C., Arikawa, M., Omura, G., Nishiyama, S., Suetomo, Y., Kakuta, S., Suzaki, T. 2006 Axopodial degradation in the heliozoon Raphidiophrys contractilis: a novel bioassay system for detecting heavy metal toxicity in an aquatic environment. Environ. Sci., 13, 193-200.
Strain(s): 2498 
Ki, J.-S., Han, M.-S. 2007 Nuclear rDNA and chloroplast rbcL, rbcS and IGS sequence data, and their implications from the Japanese, Korean, and North American harmful algae, Heterosigma akashiwo (Raphidophyceae). Environ. Res., 103, 299-304.
Keywords: Heterosigma akashiwo; blooms; nuclear rDNA; rbcS; IGS
Strain(s): 293 
Ki, J.-S., Han, M.-S. 2007 Rapid molecular identification of the harmful freshwater dinoflagellate Peridinium in various life stages using genus-specific single-cell PCR. J. Appl. Phycol., 19, 467-470.
Keywords: dinoflagellate cyst; planozygote; rDNA
Strain(s): 495 
Kim, B.-H., Oh, H.-M., Lee, Y.-K., Choi, G.-G., Ahn, C.-y., Yoon, B.-D., Kim, H.-S., 2006 Simple method for RNA preparation from cyanobacteria. J. Phycol., 42, 1137-1141.
Keywords: bead–phenol–chloroform method; cyanobacteria; RNA extraction; xanthogenate–SDS–phenol method
Strain(s): 3339230 
Kim, B.-H., Ramanan, R., Cho, D.-H., Choi, G.-G., La, H.-J., Ahn, C.-Y., Oh, H.-M., Kim, H.-S. 2012 Simple, rapid and cost-effective method for high quality nucleic acids extraction from different strains of Botryococcus braunii. PLoS One, 7, e37770 (article ID).
Strain(s): 836 
DOI: 10.1371/journal.pone.0037770
Kim, B.-H., Ramanan, R., Kang, Z., Cho, D.-H., Oh, H.-M., Kim, H.-S. 2016 Chlorella sorokiniana HS1, a novel freshwater green algal strain, grows and hyperaccumulates lipid droplets in seawater salinity. Biomass Bioenerg., 85, 300-305.
Keywords: Chlorella; Salt stress; Green algae; Lipid droplets; Biodiesel; Commercialization
Strain(s): 2150 
DOI: 10.1016/j.biombioe.2015.12.026
Kim, C.-J., Hung, Y.-H., Oh, H.-M, 2007 Factors indicating culture status during cultivation of Spirulina (Arthrospira) platensis. J. Microbiol., 45, 122-127.
Keywords: coil number; culture status; syanobacteria; floating activity; Spirulona platensis
Strain(s): 3946 
Kim, C.-J., Jung, Y.-H., Ahn, C.-Y., Lee, Y.-K., Oh, H.-M. 2010 Adsorption of turbid materials by the cyanobacterium Phormidium parchydematicum. J. Appl. Phycol., 22, 181-186.
Keywords: Chlorella vulgaris; Clay; Cyanobacteria; Phormidium parchydematicum; Turbid material
Strain(s): 39 
Kim, D., Nakamura, A., Okamoto, T., Komatsu, N., Oda, T., Ishimatsu, A., Muramatsu, T. 1999 Toxic potential of the raphidophyte Olisthodiscus luteus: mediation by reactive oxygen species. J. Plankton Res., 21, 1017-1027.
Strain(s): 15 
Kim, D., Okamoto, T., Oda, T., Tachibana, K., Lee, K. S., Ishimatsu, A., Matsuyama, Y., Honjo, T., Muramatsu, T. 2001 Possible involvement of the glycocalyx in the ichthyotoxicity of Chattonella marina (Raphidophyceae): immunological approach using antiserum against cell surface structures of the flagellate. Mar. Biol., 139, 625-632.
Strain(s): 15 
Kim, D., Waranabe, M., Nakayasu, Y., Kohata, K. 2004 Production of superoxide anion and hydrogen peroxide associated with cell growth of Chattonella antiqua. Aquat. Microb. Ecol., 35, 57-64.
Keywords: Cell cycles; Chattonella antiqua; Hydrogen peroxide; NIES culture tank; Reactive oxygen species; Red tide; Superoxide anion
Strain(s): 1 
Kim, D., Waranabe, M., Nakayasu, Y., Kohata, K. 2005 Changes in O2- and H2O2 production by Chattonella antiqua during diel vertical migration under nutrient stratification. Aquat. Microb. Ecol., 39, 183-191.
Keywords: Chattonella antiqua; Diel vertical migration; Hydrogen peroxide; Nutrient stratification; Reactive oxygen species; Superoxide anion
Strain(s): 1 
Kim, E., Simpson, A. G., Graham, L. E. 2006 Evolutionary relationships of apusomonads inferred from taxon-rich analyses of nuclear encoded genes. Mol. Biol. Evol., 23, 2455-2466.
Keywords: Apusomonas; Apusomonadidae; Opisthokonta; Amoebozoa; protists; evolution
Strain(s): 9369551333 
DOI: 10.1093/molbev/msl120
Kim, E., Wilcox, L. W., Fawley, M. W., Graham, L. E. 2006 Phylogenetic position of the green flagellate Mesostigma viride based on alpha-tubulin and beta-tubulin gene sequences. Int. J. Plant Sci., 167, 873-883.
Keywords: Mesostigma; Coleochaete; Pterosperma; Nephroselmis; Mantoniella; Streptophyta; Viridiplantae; α-tubulin; β-tubulin
Strain(s): 955 
Kim, M.-C., Yoshinaga, I., Imai, I., Nagasaki, K., Itakura, S., Ishida, Y. 1998 A close relationship between algicidal bacteria and termination of Heterosigma akashiwo (Raphidophyceae) blooms in Hiroshima Bay, Japan. Mar. Ecol. Prog. Ser., 170, 25-32.
Keywords: algicidal bacteria; marine bacteria; marine phytoplankton; red tide; bloom; Raphidophyceae; Heterosigma akashiwo
Strain(s): 1 
Kim, Y.-S., Oyaizu, H., Matsumoto, S, Watanabe, M. M., Nozaki, H. 1994 Chloroplast small-subunit ribosomal RNA gene sequence from Chlamydomonas parkeae (Chlorophyta) : molecular phylogeny of a green alga with a peculiar pigment composition. Eur. J. Phycol., 29, 213-217.
Keywords: Chlamydomonas parkeae; Chlorophyta; chloroplast small-subunit (SSU) rRNA; phylogeny; pigment composition
Strain(s): 228254468666 
Kimura, B., Ishida, Y. 1986 Possible phago-trophic feeding of bacteria in a freshwater red tide Chrysophyceae Uroglena americana. Bull. Jpn. Soc. Sci. Fish., 52, 697-701.
Strain(s): 395 
Kimura, B., Ishida, Y., Kadota, H. 1986 Effect of naturally collected bacteria on growth of Uroglena americana, a freshwater red tide Chrysophyceae. Bull. Jpn. Soc. Sci. Fish., 52, 691-696.
Strain(s): 395 
Kimura, J. 2011 Screening for allelopathic activity on algal growth. Bull. Hiroshima Pref. Tech. Res. Inst., Publ. Health Environ. Center, 19, 37-46 (in Japanese).
Keywords: Microcystis; Chlorella; Nitzschia; growth inhibition; allelopathy
Strain(s): 487642 
Kimura, Y., Kimura, S., Sato, S., Katho, H., Abe, T., Arai, M., Tomita-Yokotani, K. 2015 Evoluation of a cyanobacterium, Nostoc sp. HK-01, as food material for space agriculture on Mars. Biological Sciences in Space, 29, 24-31.
Keywords: Cyanobacteria; Food; Martian regolith simulant (MRS); Nostoc sp. HK-01; Radicalscavenging activity; Space Agriculture
Strain(s): 2109 
DOI: 10.2187/bss.29.24
Kinoshita, E., Suzaki, T., Shigenaka, Y. 2001 The ultrastructure of contractile tubules in the heliozoan Actinophrys sol and their possible involvement in rapid axopodial contraction. J. Eucaryot. Microbiol., 48, 519-526.
Keywords: Axopodium; Ca2+-contraction; colchicine; electron microscopy
Strain(s): 2497 
Kinoshita, E., Suzaki, T., Sugiyama, M., Shigenaka, Y. 1995 Ultrastructure and rapid axopodial contraction of a heliozoan, Raphidiophyrys contractilis sp. nov. J. Eucaryot. Microbiol., 42, 283-288.
Keywords: Contraction; Heliozoa; microtubule pattern; new species; Raphidiophyrys; silicic scale; X-ray microanalysis
Strain(s): 24983374 
Kinugawa, K., Etoh, M., Kuba, T., Kusuda, T. 1999 A possibility of control and prevention of excessive phytoplankton growth by photochromism. J. Jpn. Soc. Wat. Environ., 22, 932-937 (in Japanese with English summary).
Keywords: photochromism; spironaphthoxazine; shielding sunlight; algal growth potential; eutrophication
Strain(s): 98 
Kiperstok, A. C., Sebestyén, P., Podola, B., Melkonian, M. 2017 Biofilm cultivation of Haematococcus pluvialis enables a highly productive one-phase process for astaxanthin production using high light intensities. Algal Research, 21, 213-222.
Keywords: Microalgae; Immobilized cultivation; Irradiation; Carbon dioxide; Twin-Layer; Carotenoid
Strain(s): 144 
DOI: 10.1016/j.algal.2016.10.025
Kishi, M., Kawai, M., Toda, T. 2015 Heterotrophic utilization of ethylene glycol and propylene glycol by Chlorella protothecoides. Algal Research, 11, 428-434.
Keywords: algae; Chlorella protothecoides; Ethylene glycol; Propylene glycol; Heterotrophic; pH
Strain(s): 2170 
DOI: 10.1016/j.algal.2015.04.020
Kisugi, T., Okino, T. 2009 Micropeptins from the freshwater cyanobacterium Microcystis aeruginosa (NIES-100). J. Nat. Prod., 72, 777-781.
Strain(s): 100 
Kitamura, N., Nakagawa, T., Yoshida, Y., Matsushima, H., Asada, Y. 2006 Studies on the growth control of toxic cyanobacteria by use of the water-extracts from the dead leaves of deciduous trees. Environ. Eng. Res. [Kankyô-kôgaku Kenkyû Ronbunshû], 43, 543-549.
Keywords: growth control; Microcystis aeruginosa; dead-leaves; deciduous trees; condensed tannin
Strain(s): 102 
Kiyohara, T., Fujita, Y., Hattori, A., Watanabe, A. 1962 Effect of light on glucose assimilation in Tolypothrix tenuis. J. Gen. Appl. Microbiol., 8, 165-168.
Strain(s): 37 
Kobayashi, H., Ohta, S., Murao, N., Tachibana, H., Yamagata, S. 2000 Radiative transfer model for satellite remote sensing of ocean colors in coastal zones. J. Global Environ. Eng., 6, 13-31.
Keywords: equation of radiative transfer; coastal pollution; discharge of soil particle; red tide
Strain(s): 16 
Kobayashi, M. 2000 In vivo antioxidant role of astaxanthin under oxidative stress in the green alga Haematococcus pluvialis. Appl. Microbilo. Biotechnol., 54, 550-555.
Strain(s): 144 
Kobayashi, M., Hatta, K., Sugai, M. 1987 Endopolyploidy in Chlorella. Arch. Mikrobiol., 146, 309-314.
Strain(s): 2170 
Kobayashi, M., Hirai, N., Kurimura, Y., Ohigashi, H., Tsuji, Y. 1997 Abscisic acid-dependent algal morphogenesis in the unicellular green alga Haematococcus pluvialis. Plant Growth Regulation, 22, 79-85.
Keywords: abscisic acid; active oxygen; carotenoid; cyst formation; drought stress; Haematococcus pluvialis
Strain(s): 144 
Kobayashi, M., Kakizono, T., Nagai, S. 1991 Astaxanthin production by a green alga, Haematococcus pluvialis accompanied with morphological changes in acetate media. J. Ferment. Bioeng., 71, 335-339.
Strain(s): 144 
Kobayashi, M., Kakizono, T., Nagai, S. 1993 Photo-dependent astaxanthin biosynthesis in a green alga, Haematococcus pluvialis. Seibutsu-Kôgaku, 71, 233-237 (in Japanese with English summary).
Strain(s): 144 
Kobayashi, M., Kakizono, T., Nishio, N., Nagai, S. 1992 Effects of light intensity, light quality, and illumination cycle on astaxanthin formation in a green alga, Haematococcus pluvialis. J. Ferment. Bioeng., 74, 61-63.
Strain(s): 144 
Kobayashi, M., Kakizono, T., Nishio, N., Nagai, S., Kurimura, Y., Tsuji, Y. 1997 Antioxidant role of astaxanthin in the green alga Haematococcus pluvialis. Appl. Microbiol. Biotechnol., 48, 351-356.
Strain(s): 144 
Kobayashi, M., Kakizono, T., Yamaguchi, K., Nishio, N., Nagai, S. 1992 Growth and asta-xanthin formation of Haematococcus pluvialis in heterotrophic and mixotrophic conditions. J. Ferment. Bioeng., 74, 17-20.
Strain(s): 144 
Kobayashi, M., Kurimura, Y., Kakizono, T., Nishio, N., Tsuji, Y. 1997 Morphological changes in the life cycle of the green alga Haematococcus pluvialis. J. Ferment. Bioeng., 84, 94-97.
Keywords: astaxanthin; encystment; germination; Haematococcus pluvialis; life cycle; maturation
Strain(s): 144 
Kobayashi, M., Kurimura, Y., Sakamoto, Y., Tsuji, Y. 1997 Selective extraction of astaxanthin and chlorophyll from the green alga Haematococcus pluvialis. Biotechnol. Tech., 11, 657-660.
Strain(s): 144 
Kobayashi, M., Kurimura, Y., Tsuji, Y. 1997 Light-independent, astaxanthin production by the green microalga Haematococcus pluvialis under salt stress. Biotechnol. Lett., 19, 507-509.
Strain(s): 144 
Kobayashi, M., Okada, T. 2000 Protective role of astaxanthin against u.v.-B irradiation in the green alga Haematococcus pluvialis. Biotechnol. Lett., 22, 177-181.
Keywords: antioxidant; astaxanthom; Haematococcus pluvialis oxidative stress; u.v.-B;
Strain(s): 144 
Kobayashi, M., Todoroki, Y., Hirai, N., Kurimura, Y., Ohigashi, H., Tsuji, Y. 1998 Biological activities of abscisic acid analogs in the morphological change of the green alga Haematococcus pluvialis. J. Ferment. Bioeng., 85, 529-531.
Keywords: abscisic acid; astaxanthin; carotenogenesis; drought stress; encystment; plant hormone; Haematococcus pluvialis
Strain(s): 144 
Kobayashi, T. Takahara, M., Miyagishima, S, Kuroiwa, H., Sasaki, N., Ohta, N., Kuroiwa, T. 2002 Detection and localization of a chloroplast-encoded HU-like protein that may organize chloroplast nucleoids. Plant Cell, 14, 1579-1589.
Strain(s): 3377 
PubMed: 12119376
DOI: 10.1105/tpc.002717
Kobayashi, Y., Kanesaki, Y., Tanaka, A., Kuroiwa, H., Kuroiwa, T., Tanaka, K. 2009 Tetrapyrole signal as a cell cycle coordinator from organelle to nuclear DNA replication in plant cells. Proc. Nati. Acad. Sci. U. S. A., 106, 803-807.
Strain(s): 3377 
PubMed: 19141634
DOI: 10.1073/pnas.0804270105
Kobayashi, Y., Takusagawa, M., Harada, N., Fukao, Y., Yamaoka, S., Kohchi, T., Hori, K., Ohta, H., Shikanai, T., Nishimura, Y. 2016 Eukaryotic components remodeled chloroplast nucleoid organization during the green plant evolution. Genome Biol. Evol., 8, 1-16.
Keywords: chloroplast; nucleoid; evolution; endosymbiosis
Strain(s): 2285 
PubMed: 26608058
DOI: 10.1093/gbe/evv233
Kodani, S., Ishida, K., Murakami, M. 1998 Dehydroradiosumin, a trypsin inhibitor from the cyanobacterium Anabaena cylindrica. J. Nat. Prod., 61, 854-856.
Strain(s): 19 
Kodani, S., Ishida, K., Murakami, M. 1999 Occurrence and identification of UDP-N-acetylmuramyl-pentapeptide from the cyanobacterium Anabaena cylindrica. FEMS Microbiol. Lett., 176, 321-325.
Keywords: cyanobacterium; UDP-N-acetylmuramyl-pentapeptide; peptidoglycan
Strain(s): 19 
Koeduka, T., Ishizaki, K., Mwenda, C. M., Hori, K., Sasaki-Sekimoto, Y., Ohta, H., Kohchi, T., Matsui, K. 2015 Biochemical characterization of allene oxide synthases from the liverwort Marchantia polymorpha and green microalgae Klebsormidium flaccidum provides insight into the evolutionary divergence of the plant CYP74 family. Planta, 242, 1175-1186.
Keywords: Allene oxide synthase; Plant evolution; CYP74; Hydroperoxide lyase; C8 volatiles
Strain(s): 2285 
DOI: 10.1007/s00425-015-2355-8
Koga, T., Arasaki, T., Tanaka, T., Ueda, S. 1991 Studies on cell fusion of microalgae, part 2 protoplast induction and regeneration of Chlorella. Annu. Rep. Kumamoto Kogyo Univ., 17, 279-286.
Strain(s): 2163 
Koga, T., Arasaki, T., Tanaka, T., Ueda, S. 1991 Studies on cell fusion of microalgae, part 3 interspecific cell fusion of Chlorella. Annu. Rep. Kumamoto Kogyo Univ., 17, 287-293.
Strain(s): 2163 
Kohata, K., Watanabe, M. 1987 The use of a controlled experimental ecosystem (Microcosm) in studies of mechanism of red tide outbreaks (VI) - Diurnal changes of C/N ratio and distribution of chloroplast pigments in the culture of Chattonella antiqua, a red tide flagellate. Res. Rep. Natl. Inst. Environ. Stud., No. 110, 67-77 (in Japanese with English summary).
Strain(s): 1 
Kohata, K., Watanabe, M. 1988 Diel changes in the composition of photosynthetic pigments and cellular carbon and nitrogen in Chattonella antiqua (Raphidophyceae). J. Phycol., 24, 58-66.
Keywords: carotenoids; cellular carbon; Chattonella antiqua; chlorophyll; diel change; laboratory culture tank; light-dark cycles
Strain(s): 1 
Kohata, K., Watanabe, M. 1989 Diel changes in the composition of photosynthetic pigments and cellular carbon and nitrogen in Pyramimonas parkeae (Prasinophyceae). J. Phycol., 25, 377-385.
Keywords: carotenoids; cellurar carbon; chlorophyll; diel change; laboratory culture tank; light-dark cycles; loroxanthin dodecenoate; Pyremimonas parkeae
Strain(s): 254 
Kohata, K., Watanabe, M., Yamanaka, K. 1991 Highly sensitive determination of photosynthetic pigments in marine in situ samples by high-performance liquid chromatography. J. Chromatogr. A 558, 131-140.
Strain(s): 254323353 
Kojima, E., Yamaguchi, Y. 1988 Photoproduction of hydrogen by adapted cells of Chlorella pyrenoidosa. J. Ferment. Technol., 66, 19-25.
Strain(s): 685 
Komor, E., Cho, B.-H., Kraus, M. 1988 The occurrence of the glucose-inducible transport systems for glucose, proline, and arginine in different species of Chlorella. Botanica Acta, 101, 321-326.
Keywords: Amino acid transport; induction by glucose; Chlorella; classification
Strain(s): 6872150 
Kondo, F., Ikai, Y., Oka, H., Ishikawa, N., Watanabe, M. F., Watanabe, M., Harada, K., Suzuki, M. 1992 Separation and identification of microcystins in cyanobacteria by frit-fast atom bombardment liquid chromatography / mass spectrometry. Toxicon, 30, 227-237.
Strain(s): 1213 
Kondo, R., Kagiya, G., Hiroishi, S., Watanabe, M. 2000 Genetic typing of a bloom-forming cyanobacterial genus Microcystis in Japan using 16S rRNA gene sequence analysis. Plankton Biol. Ecol., 47, 1-6.
Keywords: genetic typing; 16S rDNA; Microcystis; cyanobacteria; phylogenetic analysis
Strain(s): 878990919899100102105106108109110111112298299604105510611068107610901091110511421164 
Kondo, R., Kagiya, G., Hiroishi, S., Watanabe, M., Hata, Y. 1999 Rapid DNA extraction from a bloom-forming cyanobacterium. Microbes. Environ., 14, 157-161.
Keywords: DNA extraction; PCR; Microcystis; cyanobacteria
Strain(s): 878990919899100102105106108109110111112298299604105510611068107610901091110511421164 
Kondo, R., Kagiya, G., Komura, M., Yuki, Y., Hiroishi, S., Watanabe, M. 2000 Molecular taxonomy of a bloom-forming cyanobacterial genus Microcystis. Bull. Plankton Soc. Japan, 47, 25-33 (in Japanese with English summary).
Keywords: cyanobacteria; Microcystis; bacterial criteria; molecular analysis
Strain(s): 878990919899100102105106108109110111112298299604105510611068107610901091110511421164 
Kondo, R., Kagiya, G., Yuki, Y., Hiroishi, S., Watanabe, M. 1998 Taxonomy of a bloom-forming cyanobacterial genus Microcystis. Nippon Suisan Gakkaishi, 64, 291-292 (in Japanese with English title).
Strain(s): 878990919899100102105106107108109110111112298299604 
Kondo, R., Yoshida, T., Yuki, Y., Hiroishi, S. 2000 DNA-DNA reassociation among a bloom-forming cyanobacterial genus, Microcystis. Int. J. Syst. Evol. Microbiol., 50, 67-770.
Keywords: DNA hybridization; DNA G+C content; cyanobacteria; Microcystis
Strain(s): 878998102111112298604 
Konno, R., Wakabayashi, A. 1987 Effects of chemical substance on the growth of algae [Sôrui no zôsyoku ni oyobosu kagakubusshitsu no eikyô]. Tokyo-to Kankyô Kagaku Kenkyûjo Nenpô. 1987, 4 pp. (in Japanese without English title).
Strain(s): 35 
Kooistra, W. H. C. F., Sarno, D., Balzano, S., Gu, H., Andersen, R. A., Zingone, A. 2008 Global diversity and biogeography of Skeletonema species (Bacillariophyta). Protist, 159, 177-193.
Keywords: biogeography; cryptic species; distribution; LSU rDNA; phytoplankton; Skeletonema costatum
Strain(s): 1617223323324 
Koskenniemi, K., Lyra, C., Rajaniemi-Wacklin, P., Jokela, J., Sivonen, K. 2007 Quantitative real-time PCR detection of toxic Nodularia cyanobacteria in the Baltic Sea. Appl. Environ. Microbiol., 73, 2173-2179.
Strain(s): 8189102 
Koumura, Y., Suzuki, T., Yoshikawa, S., Watanabe, M., Iseki, M. 2004 The origin of photoactivated adenylyl cyclase (PAC), the Euglena blue-light receptor: phylogenetic analysis of orthologues of PAC subunits from several euglenoids and trypanosome-type adenylyl cyclases from Euglena gracilis. Photochem. Photobiol. Sci., 3, 580-586.
Strain(s): 48 
Krienitz, L., Bock, C., Nozaki, H., Wolf, M. 2011 SSU rRNA gene phylogeny of morphospecies affiliated to the bioassay alga "Selenastrum capricornutum" recovered the polyphyletic origin of crescent-shaped Chlorophyta. J. Phycol., 47, 880-893.
Keywords: Kirchneriella; Neocystis mucosa sp. nov..; Nephrochlamys; Raphidocelis; Rhombocystis; Selenastrum; SSU rRNA gene phylogeny; taxonomy; Tetranephris; ultrastructure
Strain(s): 2708270927102711271227132714 
Krupnik, T., Kotabová, E., van Bezouwen, L. S., Mazur, R., Garstka, M., Nixon, P. J., Barber, J., Kaňa, R., Boekema, E. J., Kargul, J. 2013 A reaction center-dependent photoprotection mechanism in a highly robust photosystem II from an extremophilic red alga, Cyanidioschyzon merolae. J. Biol. Chem., 288, 23529-23542.
Strain(s): 1332 
DOI: 10.1074/jbc.M113.484659
Kubo, T., Abe, J.,  Saito, T., Matsuda, Y. 2002 Genealogical relationships among laboratory strains of Chlamydomonas reinhardtii as inferred from matrix metalloprotease genes. Curr. Genet., 41, 115-122.
Keywords: Chlamydomonas reinhardtii; Chlamydomonas smithii; matrix metalloprotease genes; molecular phylogeny
Strain(s): 2235 
Kubo, T., Saito, T., Fukuzawa, H., Matsuda, Y. 2001 Two tandemly-located matrix metalloprotease genes with different expression patterns in the Chlamydomonas sexual cell cycle. Curr. Genet., 40, 136-143.
Keywords: cell wall degradation; Chlamydomonas reinhardtii; gametolysin; zygote-specific gene
Strain(s): 2235 
Kuchitsu, K., Oh-hama, T., Tsuzuki, M., Miyachi, S. 1987 Detection and characterization of acidic compartments (vacuoles) in Chlorella vulgaris 11h cells by 31P-in vivo NMR spectroscopy and cytochemical techniques. Arch. Mikrobiol., 148, 83-87.
Strain(s): 2160 
Kuchitsu, K., Tsuzuki, M., Miyachi, S. 1988 Changes of starch localization within the chloroplast induced by changes in CO2 concentration during growth of Chlamydomonas reinhardtii. Independent regulation of pyrenoid starch and stroma starch. Plant Cell Physiol., 29, 1269-1278.
Keywords: Chlamydomonas (Chlorophyta); chloroplast; CO2 concentration; pyrenoid; starch; stroma
Strain(s): 2235 
Kuchitsu, K., Tsuzuki, M., Miyachi, S. 1988 Characterization of the pyrenoid isolated from unicellular green alga Chlamydomonas reinhardtii. Particulate form of RuBisCO protein. Protoplasma, 144, 17-24.
Keywords: Chlamydomonas; pyrenoid; ribulose-1,5-bisphosphate carboxylase/oxygenase (RuBisCO); stroma
Strain(s): 2235 
Kumagai, M., Takamura, Y., Yagi, O., Sudo, R. 1986 Interactions between Microcystis aeruginosa and Moraxella nonliquefaciens. Jpn. J. Limnol., 47, 219-228 (in Japanese with English summary).
Keywords: blue-green algae; Microcystis; interaction
Strain(s): 604 
Kumazaki, S., Akari, M., Hasegawa, M. 2013 Transformation of thylakoid membranes during differentiation from vegetative cell into heterocyst visualized by microscopic spectral imaging. Plant Physiol., 161, 1321-1333.
Strain(s): 2095 
DOI: 10.1104/pp.112.206680
Kume, N., Isono, T., Katoh, T. 1982 Stability of cyanobacterial phycobilisomes in reference to their concentration. Photobiochem. Photobiophys., 4, 25-37.
Strain(s): 2093 
Kume, N., Katoh, T. 1982 Dissociation kinetics of Anabaena phycobilisomes. Plant Cell Physiol., 23, 803-812.
Keywords: Anabaena variabilis; blue-green alga; dissociation kinetics; molecular assembly; phycobiliprotein; phycobilisome
Strain(s): 2093 
Kuno, S., Yoshida, T., Kamikawa, R., Hosoda, N., Sako, Y. 2010 The distribution of a phage-related insertion sequence element in the cyanobacterium, Microcystis aeruginosa. Microbes. Environ., 25, 295-301.
Keywords: cyanobacteria; Microcystis; cyanophage; insertion sequence; horizontal gene transfer
Strain(s): 90919899102112298604843105810671070108610981105 
Yoshida, T., Takashima, Y., Tomaru Y., Shirai, Y., Takao, Y., Hiroishi, S., Nagasaki, K. 2012 Intricate interactions between the bloom-forming cyanobacterium Microcystis aeruginosa and foreign genetic elements, revealed by diversified clustered regularly interspaced short palindromic repeat (CRISPR) signatures. Appl. Environ. Microbiol., 78, 5353-5360.
Strain(s): 87102298 
PubMed: 22636003
DOI: 10.1128/AEM.00626-12
Kunugi, M., Matsumoto, M., Kondo, K. 2010 Effect of culture conditions on production of useful materials by Haematococcus pluvialis. Bull. Soc. Sea Water Sci., Jpn, 64, 297-304.
Keywords: biomass; microalgae; carbon dioxide; useful material production
Strain(s): 144 
Kunugi, M., Satoh. S., Ihara. K., Shibata. K., Yamagishi. Y., Kogame. K., Obokata. J., Takabayashi. A., Tanaka. A. 2016 Evolution of green plants accompanied changes in light-harvesting systems. Plant Cell Physiol., 57, 1231-1243.
Keywords: Evolution; Green algae; Land plants; Light adaptation; Photosystem
Strain(s): 254141925412582 
PubMed: 27057002
DOI: 10.1093/pcp/pcw071
Kuramoto, T., Iwamoto, K., Izumi, M., Kirihata, M., Yoshizako, F. 1999 Asymmetric reduction of ethyl 2-methyl 3-oxobutanoate by Chlorella. Biosci. Biotechnol. Biochem., 63, 598-601.
Keywords: Chlorella; asymmetric reduction; ethyl 2-methyl 3-oxobutanoate; (2S, 3S)-ethyl 2-methyl 3-hydroxybutanoate; (2S, 3R)-ethyl 2-methyl 3-hydroxybutanoate
Strain(s): 226227 
Kuroiwa, T. 1998 The primitive red algae Cyanidium caldarium and Cyanidioschyzon merolae as model system for investigating the dividing apparatus of mitochondria and plastids. Bioessays, 20, 344-354.
Strain(s): 3377 
DOI: 10.1002/(SICI)1521-1878(199804)20:4<344::AID-BIES11>3.0.CO;2-2
Kuroiwa, T., Kuroiwa, H., Sakai, A., Takahashi, H., Toda, K., Itoh, R. 1998 The division apparatus of plastids and mitochondria. Int. Rev. Cytol., 181, 1-41.
Keywords: Cytokinesis; Organellokinesis; Organelle division; Mitochondrial division; Plastid division; FtsZ; Contractile ring; Cell division
Strain(s): 3377 
DOI: 10.1016/S0074-7696(08)60415-5
Kuroiwa, T., Ohnuma, M., Nozaki, H., Imoto, Y., Misumi, O., Kuroiwa, H. 2015 Cytological evidence of cell-nuclear genome size of a new ultra-small unicellular freshwater green alga, “Medakamo hakoo” strain M-hakoo 311 I. Comparison with Cyanidioschyzon merolae and Ostreococcus tauri. Cytologia, 80, 143-150.
Keywords: Ultra-small alga; Chlorophyte M. hakoo; Cyanidioschyzon merolae; Ostreococcus tauri; Genome size; Cytochemistry
Strain(s): 3377 
DOI: 10.1508/cytologia.80.143
Kuroiwa, T., Suzuki, T., Ogawa, K., Kawano, S. 1981 The chloroplast nucleus: Distribution, number, size and shape, and a model for the multiplication of the chloroplast genome during chloroplast development. Plant Cell Physiol., 22, 381-396.
Keywords: chloroplast nuclei; classification (chloroplast); development (Chloroplast); division cycle (chloroplast)
Strain(s): 472572 
Kuroiwa, Y., Al-Maamari, R. S., Tasaki, M., Okamura, K., Sueyoshi, M., Nakashima, A., Yoshida, E., Suzuki, K. 2014 Spirulina subsalsa var. salina var. nov.: Thermo-halotolerant cyanobacteria accumulating two kinds of compatible solute, originated from the Sultanate of Oman. J. Environ. Biotechnol. (環境バイオテクノロジー学会誌), 14, 43-56.
Keywords: Spirulina subsalsa var. salina var. nov.; Halospirulina; halotolerant; glycine betamine; O-α-D-glucopyranosyl-(1→2)-glycerole
Strain(s): 3373 
Kushibiki, A., Yokoyama, A., Iwataki, M., Yokoyama, J., West, J. A., Hara, Y. 2012 New unicellular red alga, Bulboplastis apyrenoidosa gen. et sp. nov. (Rhodellophyceae, Rhodophyta) from the mangroves of Japan: Phylogenetic and ultrastructural observations. Phycol. Res., 60, 114-122.
Keywords: Bulboplastis apyrenoidosa; chloroplast; Golgi body; mannitol; nucleus-associated organelles; small subunit rDNA; ultrastructure; unicellular red alga
Strain(s): 2742 
Kusumi, T., Ooi, T., Watanabe, M. M. Takahashi, H., Kakisawa, H. 1987 Cyanoviridin RR, a toxin from the cyanobacterium (blue-green alga) Microcystis viridis. Tetrahedron Letters, 28, 4695-4698.
Strain(s): 102 
Kusumi, T., Takata, Y., Itatsu, Y., Zha, J. 2014 Whole effluent toxicity assessment of industrial effluents in Toyama, Japan with a battery of short-term chronic bioassays. J. Water Environ. Technol., 12, 55-63.
Keywords: aqquatic organism; ecotoxic effect; industrial effluent; whole effluent toxicity (WET)
Strain(s): 35 
DOI: 10.2965/jwet.2014.55
Lababpour, A., Hada, K., Shimahara, K., Katsuda, T., Katoh, S. 2004 Effects of nutrient supply methods and illumination with blue light emitting diodes (LEDs) on astaxanthin production by Haematococcus pluvialis. J. Biosci. Bioeng., 98, 452-456.
Keywords: astaxanthin; Haematococcus pluvialis; blue light emitting diode (LED); nutrient supply
Strain(s): 144 
PubMed: 16233735
DOI: 10.1016/S1389-1723(05)00311-7
Lababpour, A., Shimahara, K., Hada, K., Kyoui, Y., Katsuda, T., Katoh, S. 2005 Fed-batch culture under illumination with blue light emitting diodes (LEDs) for astaxanthin production by Haematococcus pluvialis. J. Biosci. Bioeng., 100, 339-342.
Keywords: astaxanthin; Haematococcus pluvialis; fed-batch culture; blue light emitting diode (LED)
Strain(s): 144 
PubMed: 16243287
DOI: 10.1263/jbb.100.339
Laflamme, M., Lee, R. W. 2003 Mitochondrial genome conformation among CW-group Chlorophycean algae. J. Phycol., 39, 213-220.
Keywords: Chlamydomonas; Chlorophyceae; gel electrophoresis; mitochondrial DNA conformation; phylogeny
Strain(s): 296484 
Le Gall, F., Rigaut-Jalabert, F., Marie, D., Garczareck, L., Viprey, M., Godet, A., Vaulot, D. 2008 Picoplankton diversity in the South-East Pacific Ocean from cultures. Biogeosciences, 5, 203-214.
Strain(s): 2582 
Lee, H., Ban, S. 1999 Effect of crowding on growth and reproduction of Simocephalus vetulus O.F.Muller. Hydrobiologia, 391, 135-145.
Keywords: flow-through technique; crowding effect; growth and reproduction; neonate size; reproductive investments; Simocephalus vetulus
Strain(s): 282 
Lee, K.-Y., Park, J.-H., Park, B.-S. 1996 CO2 fixation and SCP production using blue green algae. Theories and Applications of Chem. Eng. (Korea), 2, 489-492 (in Korean with English title).
Strain(s): 193946 
Lee, T., Tsuzuki, M., Takeuchi, T., Yokoyama, K., Karube, I. 1994 In vivo fluorometric method for early detection of cyanobacterial waterblooms. J. Appl. Phycol., 6, 489-495.
Keywords: cyanobacteria; waterblooms; in vivo fluorescence; monitoring; Microcystis aeruginosa
Strain(s): 298512 
Lee, T., Tsuzuki, M., Takeuchi, T., Yokoyama, K., Karube, I. 1995 Quantitative determination of cyanobacteria in mixed phytoplankton assemblages by an in vivo fluorimetric method. Anal. Chim. Acta, 302, 81-87.
Keywords: cyanobacteria; quantitative estimation; phycocyanin; waterblooms; Microcystis aeruginosa
Strain(s): 298512 
Lee, T.-Y., Gotoh, N., Niki, E., Yokoyama, K., Tsuzuki, M., Kakeuchi, T., Karube, I. 1995 Chemilluminescence detection of red tide phytoplankton Chattonella marina. Anal. Chem., 67, 225-228.
Strain(s): 2138 
Lee, Y.-K., Ahn, C.-Y., Kim, H.-S., Oh, H.-M. 2010 Cyanobactericidal effect of Rhodococcus sp. isolated from eutrophic lake on Microcystis sp. Biotechnol. Lett., 32, 1673-1678.
Keywords: Algicide; Bloom; Cyanobacteria; Microcystis; Rhodococcus
Strain(s): 23843 
Lee, Y.-K., Soh, C.-W. 1991 Accumulation of astaxanthin in Haematococcus lacustris (Chlorophyta). J. Phycol., 27, 575-577.
Keywords: astaxanthin; chemostat cultures; chlorophyta; Haematococcus lacustris; photon flux density; specific growth rate
Strain(s): 2264 
Lee, Y.-K., Tan, H.-M. 1988 Interphylum protoplast fusion and genetic recombination of the algae Porphyridium cruentum and Dunaliella spp. J. Gen. Microbiol., 134, 635-641.
Strain(s): 2257 
Leikoski, N., Fewer, D. P., Jokela, J., Alakoski, P., Wahlsten, M., Sivonen, K. 2012 Analysis of an inactive cyanobactin biosynthetic gene cluster leads to discovery of new natural products from strains of the genus Microcystis. PLoS One, 7, e43002 (article ID).
Strain(s): 843 
DOI: 10.1371/journal.pone.0043002
Lemieux, C., Otis, C., Turmel, M. 2000 Ancestral chloroplast in Mesostigma viride reveals an early branch of green plant evolution. Nature, 403, 649-652.
Strain(s): 296 
PubMed: 10688199
DOI: 10.1038/35001059
Lemieux, C., Otis, C.,Turmel, M. 2014 Chloroplast phylogenomic analysis resolves deep-level relationships within the green algal class Trebouxiophyceae. BMC Evol. Biol., 14, 211 (article ID).
Keywords: Chlorophyta; Trebouxiophyceae; Plastid genome; Phylogenomics
Strain(s): 18242166 
Lemieux, C., Otis, C.,Turmel, M. 2014 Six newly sequenced chloroplast genomes from prasinophyte green algae provide insights into the relationships among prasinophyte lineages and the diversity of streamlined genome architecture in picoplanktonic species. BMC Evol. Biol., 14, 857 (article ID).
Keywords: Viridiplantae; Prasinophytes; Prasinococcales; Picocystis; Picoplanktonic algae; Nephroselmis; Plastid genome; Phylogenomics; Genome reduction; trans-spliced group II intron
Strain(s): 252 
Li, JR., Wu, Y., Qi, YJ. 2014 microRNAs in a multicellular green alga Volvox carteri. Sci. China-Life Sci., 57, 36-45.
Keywords: Volvox; small RNA; microRNA; conservation; evolution
Strain(s): 865 
DOI: 10.1007/s11427-013-4580-3
Li, R., Carmichael, W. W., Pereira, P. 2003 Morphological and 16S rRNA gene evidence for reclassification of the paralytic shellfish toxin producing Aphanizomenon flos-aquae LMECYA 31 as Aphanizomenon issatschenkoi (Cyanophyceae). J. Phycol., 39, 814-818.
Keywords: Ahanizomenon issatschenkoi; cyanotoxin; 16S rDNA; morphology; gene sequences; taxonomy
Strain(s): 1728 
Li, R., Carmichael, W. W., Watanabe, M. M. 2000 Taxonomic re-evaluation of Aphanizomenon flos-aquae NH-5 based on morphology and 16S rRNA gene sequences. Hydrobiologia, 438, 99-105.
Keywords: Aphanizomenon; Cyanobacteria; 16S rRNA; morphology; sequences; taxonomy
Strain(s): 1728 
Li, R., Watanabe, M. M. 2004 Fatty acid composition of planktonic species of Anabaena (Cyanobacteria) with coiled trichomes exhibited a significant. Curr. Microbiol., 49, 376-380.
Strain(s): 79263 
Li, R., Watanabe, M., Watanabe, M. M. 2000 Taxonomic studies of planktic species of Anabaena based on morphological characteristics in cultured strains. Hydrobiologia, 438, 117-138.
Keywords: Anabaena; cyanobacteria; identification; morphology; planktic; taxonomy
Strain(s): 747879802631652165316671672167316771695 
Li, R., Yokota, A., Sugiyama, J., Watanabe, M., Hiroki, M., Watanabe, M. M. 1998 Chemotaxonomy of planktonic cyanobacteria based on non-polar and 3-hydroxy fatty acid composition. Phycol. Res., 46, 21-28.
Keywords: 3-hydroxy fatty acids; chemotaxonomy; fatty acid; non-polar fatty acids; planktonic cyanobacteria
Strain(s): 274478798081878998102111112205207298604810821825826 
Li, Y., Qin, J. G. 2005 Comparison of growth and lipid content in three Botryococcus braunii strains. J. Appl. Phycol., 17, 551-556.
Keywords: temperature; irradiance; salinity; Botryococcus braunii; hydrocarbon
Strain(s): 836 
Lin, S., Wu, Z., Yu, G., Zhu, M., Yu, B., Li, R. 2010 Genetic diversity and molecular phylogeny of Planktothrix (Oscillatoriales, cyanobacteria) strains from China. Harmful Algae, 9, 87-97.
Keywords: diversity; phylogeny; Planktothrix; 16S rRNA; rbcLX; rpoC1; taxonomy; water bloom
Strain(s): 1266 
DOI: 10.1016/j.hal.2009.08.004
Liu, C. B., Lin, L. P., Su, Y. C. 1996 Utilization of Chlorella vulgaris for uptake of nitrogen, phosphorus and heavy metals. J. Chin. Agr. Chem. Soc., 34, 331-343 (in Chinese with English summary).
Keywords: Chlorella vulgaris; heavy metals; nitrogen; phosphorus
Strain(s): 227 
Liu, J., Gerken, H., Li, Y. 2014 Single-tube colony PCR for DNA amplification and transformant screening of oleaginous microalgae. J. Appl. Microbiol., 26, 1719-1726.
Keywords: Biofuels; Colony PCR; High throughput; Microalgae; Single tube; Transformant screening
Strain(s): 144 
Liu, SH., Zhang, PY., Cong, BL., Liu, CL., Lin XZ., Shen, JH., Huang, XH. 2010 Molecular cloning and expression analysis of a cytosolic Hsp70 gene from Antarctic ice algae Chlamydomonas sp. ICE-L. Extremophiles, 14, 329-337.
Keywords: Antarctic ice algae; Chlamydomonas sp. ICE-L; Heat shock protein; Hsp70; Psychrophile; Stress
Strain(s): 843 
Liu, W., Au, D. W.T., Anderson, D. M., Lam, P. K.S., Wu, R. S.S. 2007 Effects of nutrients, salinity, pH and light:dark cycle on the production of reactive oxygen species in the alga Chattonella marina. J. Exp. Mar. Biol. Ecol., 346, 76-86.
Keywords: Chattonella marina; Iron; Nutrient; pH; Physical parameters; Plasma membrane; Reactive oxygen species; Redox
Strain(s): 3 
Liu, X., Beyrend-Dur, D., Dur, G., Ban, S. 2014 Effects of temperature on life history traits of Eodiaptomus japonicus (Copepoda: Calanoida) from Lake Biwa (Japan). Limnology, 15, 85-97.
Keywords: Life history traits; Temperature effects; Eodiaptomus japonicus; Copepod dynamics; Individual variability
Strain(s): 2822235 
DOI: 10.1007/s10201-013-0417-9
Liu, X., Syuhei, B. 2017 Effects of acclimatization on metabolic plasticity of Eodiaptomus japonicus (Copepoda: Calanoida) determined using an optical oxygen meter. J. Plankton Res., 39, 111-121.
Keywords: temperature acclimatization; metabolic rates; oxygen consumption rates; zooplankton; optical oxygen meter
Strain(s): 2822235 
DOI: 10.1093/plankt/fbw084
Liu, Y., Hao, A., Iseri, Y., Kuba, T., Zhang, A. 2014 A comparison of the mussel Anodonta woodiana's acute physiological responses to different algae diets. JOCET, 2, 126-131.
Keywords: Anodonta woodiana; microcystis aeruginosa; scenedesmus obliquus; scope for growth (SFG)
Strain(s): 902279 
DOI: 10.7763/JOCET.2014.V2.106
Liu, Y., Hao, A., Iseri, Y., Li, C., Zhang, Z., Kuba, T. 2015 Possible survival mechanisms of Sinanodonta woodiana exposed to microcystin. Journal of JSCE, 3, 259-267.
Keywords: Sinanodonta woodiana; selective feeding mechanism; Microcystis-blooming; detoxification mechanism; scope for growth (SFG)
Strain(s): 2279 
DOI: 10.2208/journalofjsce.3.1_259
Livingston, G., Fukumori, K., Provete, D. B., Kawachi, M., Takamura, N., Leibold, M. A. 2017 Predators regulate prey species sorting and spatialdistribution in microbial landscapes. J. Anim. Ecol., 86, 501-510.
Keywords: bacteria; colonization; dispersal; disturbance; protists; spatial pattern; variation partitioning
Strain(s): 2239 
PubMed: 28138991
DOI: 10.1111/1365-2656.12639
Loganathan, N., Tsai, YC., Mueller-Cajar, O. 2016 Characterization of the heterooligomeric red-type rubisco activase from red algae. Proc. Nati. Acad. Sci. U. S. A., 113, 14019-1402.
Keywords: rubisco; activase; photosynthesis; AAA+ proteins; red algae
Strain(s): 1332 
PubMed: 27872295
DOI: 10.1073/pnas.1610758113
Logares, R., Shalchian-Tabrizi, K., Boltovskoy, A., Rengefors, K. 2007 Extensive dinoflagellate phylogenies indicate infrequent marine–freshwater transitions. Mol. Phylogenet. Evol., 45, 887-903.
Keywords: Dinoflagellates; Freshwater; Colonization; Phylogeny
Strain(s): 304365471495501 
Lu, J., Satoh, H., Takeuchi, T. 2008 Development of models of threshold and efficient algal densities for larval and juvenile tilapia Oreochromis niloticus on raw Spirulina. Aquaculture, 285, 249-254.
Keywords: assimilation; 14C labeling; CERAS (closed ecological recirculating aquaculture system); density; ingestion; Spirulina; Oreochromis niloticus
Strain(s): 39 
Lu, J., Takeuchi, T. 2004 Spawning and egg quality of the tilapia Oreochromis niloticus fed solely on raw Spirulina throughout three generations. Aquaculture, 234, 625-640.
Keywords: Closed ecological recirculating aquaculture system (CERAS); egg quality; larval quality; Oreochromis niloticus; parent; progeny; reproduction; spawn; Spirulina platensis
Strain(s): 39 
Lu, J., Takeuchi, T., Satoh, H. 2004 Ingestion and assimilation of three species of freshwater algae by larval tilapia Oreochromis niloticus. Aquaculture, 238, 437-449.
Keywords: carbon assimilation; closed ecological recirculating aquaculture system (CERAS); Chlorella; 14C labeling; Euglena; ingestion; Oreochromis niloticus; Spirulina
Strain(s): 3948641 
Lu, J., Takeuchi, T., Satoh, H. 2006 Ingestion, assimilation and utilization of raw Spirulina by larval tilapia Oreochromis niloticus during larval development. Aquaculture, 254, 686-692.
Keywords: assimilation; 14C labeling; CERAS (closed ecological recirculating aquaculture system); ingestion; Spirulina; Oreochromis niloticus
Strain(s): 39 
Lucksch, I.. 1932 Ernährungsphysiologische Untersuchungen an Chlamydomonadeen. Beih. Bot. Centralbl., 50, 64-94.
Strain(s): 2206 
Luo, W., Kotut, K., Krienits, L. 2013 Hidden diversity of eukaryotic plankton in the soda lake Nakuru, Kenya, during a phase of low salinity revealed by a SSU rRNA gene clone library. Hydrobiologia, 702, 95-103.
Keywords: Chlorophyta; clone library; lake Nakuru; lesser flamingo; phytoflagellates; Soda lakes; SSU rRNA
Strain(s): 1360 
DOI: 10.1007/s10750-012-1310-y
Luu, P. T., Son, D. T., Utsumi, M. 2016 Accumulation and elimination of Microcystins in freshwater clam Corbicula leana under laboratory conditions, assessment of risks to humans. J. Biotechnol., 14, 1-10.
Keywords: alga; heterokontophyte; hexa-amine; labyrinthulomycete; methylated polyamine; penta-amine
Strain(s): 1018001086 
Lyra, C., Suomalainen, S., Gugger, M., Vezie, C., Sundman, P., Paulin, L., Sivonen, K. 2001 Molecular characterization of planktic cyanobacteria of Anabaena, Aphanizomenon, Microcystis and Planktothrix genera. Int. J. Syst. Evol. Microbiol., 51, 13-526.
Keywords: cyanobacteria; 16S rRNA gene; RFLP; sequencing; REP; ERIC
Strain(s): 7981 
DOI: 10.1099/00207713-51-2-513
MacKenzie, L. A., Smith, K. F., Rhodes, L. L., Brown, A., Langi, V., Edgar, M., Lovell, G., Preece, M. 2011 Mortalities of sea-cage salmon (Oncorhynchus tshawytscha) due to a bloom of Pseudochattonella verruculosa (Dictyochophyceae) in Queen Charlotte Sound, New Zealand. Harmful Algae, 11, 45-53.
Keywords: Pseudochattonella verruculosa; Dictyochophyceae; salmon kill; Queen Charlotte Sound; New Zealand
Strain(s): 1 
Maki, T., Imai, I. 2001 Effects of harmful dinoflagellate Heterocapsa circularisquama cells on the growth of intracellular bacteria. Microbes. Environ., 16, 234-239.
Keywords: dinoflagellate; red tide; Heterocapsa circularisquama; intracellular bacteria; growth
Strain(s): 1 
Makino, T., Harada, H., Ikenaga, H., Matsuda, S., Takaichi, S., Shindo, K., Sandmann, G., Ogata, T., Misawa, N. 2008 Characterization of cyanobacterial carotenoid ketolase CrtW and hydroxylase CrtR by complementation analysis in Escherichia coli. Plant Cell Physiol., 49, 1867-1878.
Keywords: Anabaena sp. PCC 7120; β-carotene; carotenoid; CrtR; CrtW; Nostoc punctiforme
Strain(s): 2095 
Makino, W., Ban, S. 2000 Response of life history traits to food conditions in a cyclopoid copepod from an oligotrophic environment. Limnol. Oceanogr., 45, 396-407.
Strain(s): 282 
Makino, W., Ban, S. 2003 Fecal pellet production between molts in a cyclopoid copopod: patterns, individual variability and implications for growth and development. Hydrobiologia, 501, 101-107.
Keywords: Cyclops; molt; fecal pellet; variations; growth and development
Strain(s): 282 
Makiuchi, T., Nara, T., Annoura, T., Hashimoto, T., Aoki, T. 2007 Occurrence of multiple, independent gene fusion events for the fifth and sixth enzymes of pyrimidine biosynthesis in different eukaryotic groups. Gene, 394(1-2), 78-86.
Keywords: gene fusion; de novo pyrimidine biosynthesis; lateral gene transfer; evolutionary marker
Strain(s): 48 
Man-Aharonovich, D., Philosof, A., Kirkup, B. C., Le Gall, F., Yogev, T., Berman-Frank, I., Polz, M. F., Vaulot, D., Béjà, O. 2010 Diversity of active marine picoeukaryotes in the Eastern Mediterranean Sea unveiled using photosystem-II psbA transcripts. ISME Journal, 4, 1044-1052.
Keywords: picoeukaryotes; PPEs; psbA; transcripts; Mediterranean Sea; diversity
Strain(s): 258826822687 
DOI: 10.1038/ismej.2010.25
Manali, KM., Arunraj, R., Kumar, T., Ramya, M. 2016 Detection of microcystin producing cyanobacteria in Spirulina dietary supplements using multiplex HRM quantitative PCR. J. Appl. Phycol.,
Keywords: Microcystin; Arthrospira platensis; Multiplex HRM qPCR; Dietary supplements; Liquid; chromatography–high-resolution mass spectrometr
Strain(s): 843 
DOI: 10.1007/s10811-016-1011-4
Mano, H., Okamoto, S. 2016 Preliminary ecological risk assessment of 10 PPCPs and their contributions to the toxicity of concentrated surface water on an algal species in the middle basin of Tama River. J. Water Environ. Technol., 14, 423-436.
Keywords: bioassay; environmental risk; hazard quotien
Strain(s): 35 
DOI: 10.2965/jwet.15-045
Marin, B. 2012 Nested in the Chlorellales or independent class? Phylogeny and classification of the Pedinophyceae (Viridiplantae) revealed by molecular phylogenetic analyses of complete nuclear and plastid-encoded rRNA operons. Protist, 163, 778-805.
Keywords: Marsupiomonadales; Marsupiomonas; Pedinomonas; Pedinophyceae; Resultor; Resultomonas
Strain(s): 252483 
PubMed: 22192529
DOI: 10.1016/j.protis.2011.11.004
Marin, B., Melkonian, M. 1994 Flagellar hairs in prasinophytes (Chlorophyta): ultrastructure and distribution on the flagellar surface. J. Phycol., 30, 659-678.
Keywords: flagellar hairs; Mamiella; Mantoniella; Nephroselmis; Prasinophyceae; Pseudoscourfieldia; Pterosperma; Pyramimonas; Scherffelia; ultrastructure
Strain(s): 483485 
Marin, B., Melkonian, M. 1999 Mesostigmatophyceae, a new class of streptophyte green algae revealed by SSU rRNA sequence comparisons. Protist, 150, 399-417.
Strain(s): 475 
PubMed: 10714774
DOI: 10.1016/S1434-4610(99)70041-6
Marin, B., Melkonian, M. 2010 Molecular phylogeny and classification of the Mamiellophyceae class. nov. (Chlorophyta) based on sequence comparisons of the nuclear- and plastid-encoded rRNA operons. Protist, 161, 304-336.
Keywords: prasinophytes; SSU rDNA; LSU rDNA; ITS2; systematics; freshwater; Monomastigales; Dolichomastigales; Mamiellales; Monomastigaceae; Dolichomastigaceae; Crustomastigaceae; Bathycoccaceae
Strain(s): 252255360483 
PubMed: 20005168
DOI: 10.1016/j.protis.2009.10.002
Marshall, J. A., Newman, S. 2002 Differences in photoprotective pigment production between Japanese and Australian strains of Chattonella marina (Raphidophyceae). J. Exp. Mar. Biol. Ecol., 272, 13-27.
Keywords: ultraviolet radiation; microalgae; raphidophytes; Chattonella; mycosporine amino acids; pigments; xanthophyll cycle; stratospheric ozone depletion
Strain(s): 1 
Marshall, J. A., Nichols, P. D., Hallegraeff, G. M. 2002 Chemotaxonomic survey of sterols and fatty acids in six marine raphidophyte algae. J. Appl. Phycol., 14, 255-265.
Keywords: Chattonella antiqua; Chattonella marina; Chattonella subsalsa; chemotaxonomy; fatty acids; Fibrocapsa japonica; Heterosigma akashiwo; Olisthodiscus luteus; phycotoxins; raphydophytes; sterols
Strain(s): 15 
Maruyama, I., Ando, Y., Maeda, T., Hirayama, K. 1989 Uptake of vitamin B12 by various strains of unicellular algae Chlorella. Nippon Suisan Gakkaishi, 55, 1785-1790.
Strain(s): 48226687215721692175 
Maruyama, I., Nakamura, T., Matubayashi, T., Ando, Y., Maeda, T. 1986 Identification of the alga known as "marine Chlorella" as a member of the Eustigmatophyceae. Jpn. J. Phycol., 34, 319-325.
Strain(s): 2146 
Maruyama, K. 1977 Classification of Chlorella strain by infrared absorption spectra of cell samples. Bot. Mag. Tokyo, 90, 67-77.
Strain(s): 2262276856872151216321702175 
Maruyama, K. 1977 Classification of Chlorella strains by cell appearance and group sera. Bot. Mag. Tokyo, 90, 57-66.
Strain(s): 2262276852151216321702175 
Maruyama, S., Misumi, O., Ishii, Y., Asakawa, S., Shimizu, A., Sasaki, T., Matsuzaki, M., Shin-i, T., Nozaki, H., Kohara, Y., Shimizu, N., Kuroiwa, T. 2007 Centromere dynamics in the primitive red alga Cyanidioschyzon merolae. Plant J., 49, 1122-1129.
Keywords: centromere; CENH3; chromosome segregation; Cyanidioschyzon merolae
Strain(s): 3377 
PubMed: 17319844
DOI: 10.1111/j.1365-313X.2006.03024.x
Maruyama, S., Misawa, K., Iseki, M., Watanabe, M., Nozaki, H. 2008 Origins of a cyanobacterial 6-phosphogluconate dehydrogenase in plastid-lacking eukaryotes. BMC Evol. Biol., 8, 151 (article ID).
Strain(s): 48 
Maruyama, S., Misumi, O., Ishii, Y., Asakawa, S., Shimizu, A., Sasaki, T., Matsuzaki, M., Shin-I, T., Nozaki, H., Kohara, Y., Shimizu, N., Kuroiwa, T. 2004 The minimal eukaryotic ribosomal DNA units in the primitive red algae Cyanidioschyzon merolae. DNA Res., 11, 83-91.
Keywords: BAC library; Genome organization; Nucleolus
Strain(s): 3377 
Matsuda, H., Okino, T., Murakami, M., Yamaguchi, K. 1996 Aeruginosins 102-A and B, new thrombin inhibitors from the cyanobacterium Microcystis viridis (NIES-102). Tetrahedron, 52, 14501-14506.
Strain(s): 102 
Matsuda, H., Okino, T., Murakami, M., Yamaguchi, K. 1996 Radiosumin, a trypsin inhibitor from the blue-green alga Plectonema radiosum. J. Org. Chem., 61, 8648-8650.
Strain(s): 515 
Matsumoto, C., Sugiyama, T., Akazawa, T., Miyachi, S. 1969 Structure and function of chloroplast proteins. IX. Further comparative studies on Chlorella and spinach leaf ribulose-1,5-diphosphate carboxylase. Arch. Biochem. Biophys., 135, 282-287.
Strain(s): 2170 
Matsumoto, H., Takechi, K., Sato, H., Takio, S., Takano, H. 2012 Treatment with antibiotics that interfere with peptidoglycan biosynthesis inhibits chloroplast division in the desmid Closterium. PLoS One, 7, e40734 (article ID).
Strain(s): 67 
DOI: 10.1371/journal.pone.0040734
Matsumoto, M., Mayama, S., Nemoto, M., Fukuda, Y., Muto, M., Yoshino, T., Matsunaga, T., Tanaka, T. 2014 Morphological and molecular phylogenetic analysis of the high triglyceride-producing marine diatom, Fistulifera solaris sp. nov. (Bacillariophyceae). Phycol. Res., 62, 257-268.
Keywords: 18S rDNA; JPCC DA0580; marine diatom; morphometric analyses
Strain(s): 2722 
Matsumoto, T., Kawachi, M., Miyashita, H., Inagaki, Y. 2012 Prasinoxanthin is absent in the green-colored dinoflagellate Lepidodinium chlorophorum strain NIES-1868: pigment composition and 18S rRNA phylogeny. J. Plant Res., 125, 705-711.
Keywords: Plastid replacement; Tertiary endosymbiosis; Serial secondary endosymbiosis
Strain(s): 1868 
DOI: 10.1007/s10265-012-0486-6
Matsumoto, T., Shinozaki, F., Chikuni, T., Yabuki, A., Takishita, K., Kawachi, M., Nakayama, T., Inouye, I., Hashimoto, T., Inagaki, Y. 2011 Green-colored plastids in the dinoflagellate genus Lepidodinium are of core Chlorophyte origin. Protist, 162, 268-276.
Strain(s): 626141918682432 
PubMed: 20829107
DOI: 10.1016/j.protis.2010.07.001
Matsunaga, S., Hori, T., Takahashi, T., Kubota, M., Watanabe, M., Okamoto, K., Masuda, K., Sugai, M. 1998 Discovery of signaling effect of UV-B/C light in the extended UV-A/blue-type action spectra for step-down and step-up photo-phobic responses in the unicellular flagellate alga Euglena gracilis. Protoplasma, 201, 45-52.
Keywords: action spectra; blue light; Euglena; photophobic responses; ultraviolet light
Strain(s): 48 
Matsunaga, S., Takahashi, T., Watanabe, M., Sugai, M., Hori, T. 1999 Control by ammonium ion of the change from step-up to step-down photophobically responding cells in the flagellate alga Euglena gracilis. Plant Cell Physiol., 40, 213-221.
Keywords: ammonium ion; blue light; Euglena; greening; photophobic responses
Strain(s): 48 
Matsunaga, S., Watanabe, S., Sakaushi, S., Miyamura, S., Hori, T. 2003 Screening effect diverts the swimming directions from diaphototactic to positive phototactic in a disk-shaped green flagellate Mesostigma viride. Photochem. Photobiol., 77, 324-332.
Strain(s): 476477 
Matsuzaki, M., Misumi, O., Shin-i, T., Maruyama, S., Takahara, M., Miyagishima, S., Mori, T., Nishida, K., Yagisawa, F., Nishida, K., Yoshida, Y., Nishimura, Y., Nakao, S., Kobayashi, T., Momoyama, Y., Higashiyama, T., Minoda, A., Sano, M., Nomoto, H., Oishi, K., Hayashi, H., Ohta, F., Nishizaka, S., Haga, S., Miura, S., Morishita, T., Kabeya, Y., Terasawa, K., Suzuki, Y., Ishii, Y., Asakawa, S., Takano, H., Ohta, N., Kuroiwa, H., Tanaka, K., Shimizu, N., Sugano, S., Sato, N., Nozaki, H., Ogasawara, N., Kohara, Y., Kuroiwa, T. 2004 Genome sequence of the ultrasmall unicellular red alga Cyanidioschyzon merolae 10D. Nature, 428, 653-657.
Strain(s): 13323377 
PubMed: 15071595
DOI: 10.1038/nature02398
Matsuzaki, R., Hara, Y., Nozaki, H. 2012 A taxonomic revision of Chloromonas reticulata (Volvocales, Chlorophyceae), the type species of the genus Chloromonas, based on multigene phylogeny and comparative light and electron microscopy. Phycologia, 51, 74-85.
Keywords: Chloromonadinia; Chloromonas; Chloromonas chlorococcoides comb. nov.; Chloromonas lineage; Chloromonas typhlos comb. nov.; Molecular phylogeny; Morphology; Taxonomy; Ultrastructure; Volvocales
Strain(s): 447 
Matsuzaki, R., Kawai-Toyooka, H., Hara, Y., Nozaki, H. 2015 Revisiting the taxonomic significance of aplanozygote morphologies of two “cosmopolitan” snow species of the genus Chloromonas (Volvocales, Chlorophyceae). Phycologia, 54, 491–502.
Keywords: Chloromonas brevispina; Chloromonas krienitzii sp. nov.; Chloromonas nivalis; Molecular phylogeny; Morphology; Snow algae; Ultrastructure
Strain(s): 237923803752 
DOI: 10.2216/15-33.1
Matsuzaki, R., Nakada, T., Hara, Y., Nozaki, H. 2013 Description of Chloromonas kasaiae sp. nov. (Volvocales, Chlorophyceae), based on comparative electron microscopy and molecular data. Phycologia, 52, 239-245.
Keywords: Chloromonadinia; Chloromonas kasaiae; Molecular phylogeny; Morphology; Taxonomy; Ultrastructure; Volvocales
Strain(s): 2862 
Matumura, H., Muto, S., Miyachi, S. 1982 Light-induced conversion of NAD+ to NADP+ in Chlorella cells. Biochim. Biophys. Acta, 679, 300-307.
Strain(s): 21602161 
Mazalová, P., Šarhanová, P., Ondřej, V., Poulíčková, A. 2011 Quantificaion of DNA content in freshwater microalgae using flow cytometry: a modified protocol for selected green microalgae. Fottea, 11, 317-328.
Keywords: DNA content; flow cytometry; desmids; microalgae; standards; Micrasterias pinnatifida
Strain(s): 783 
McDonald, S. M., Plant, J. N. Worden, A. Z. 2010 The mixed lineage nature of nitrogen transport and assimilation in marine eukaryotic phytoplankton: a case study of Micromonas. Mol. Biol. Evol., 27, 2268-2283.
Keywords: nitrogen; Micromonas; Ostreococcus; green algae; green lineage; quantitative PCR; genomics; phylogeny
Strain(s): 2672 
DOI: 10.1093/molbev/msq113
McKay, R. M., Gibbs, S. P. 1989 Immunocytochemical localization of ribulose 1,5-bisphosphate carboxylase/oxygenase in light-limited and light-saturated cells of Chlorella pyrenoidosa. Protoplasma, 149, 31-37.
Keywords: pyrenoid; ribulose 1,5-bisphosphate carboxylase/oxygenase; Chlorella pyrenoidosa; immunocytochemistry
Strain(s): 687 
Mcmillan, R. 1957 Morphogenesis and polymorphism of Ankistrodesmus spp. J. Gen. Microbiol., 17, 658-677.
Strain(s): 219021942195 
Meriluoto, J., Codd, G. A. (eds.) 2005 TOXIC: cyanobacterial monitoring and cyanotoxin analysis. Acta Acad. Aboensis, ser, B, Vol. 65(1), 149 pp.
Strain(s): 107 
Meriluoto, J., Karlsson, K., Spoof, L. 2004 High-throughput screening of ten microcystins and nodularins, cyanobacterial peptide hepatotoxins, by reversed-phase liquid chromatography-electrospray ionization mass spectrometry. Chromatographia, 59, 291-298.
Keywords: columun liquid chromatography; mass spectrometry detection; microcystins and nodularins; cyanobacteria; toxins
Strain(s): 107 
Metcalf, J. S., Bell, S. G., Codd, G. A. 2000 Production of novel polyclonal antibodies against the cyanobacterial toxin microcystin-LR and their application for the detection and quantification of microcystins and nodularin. Wat. Res., 34, 2761-2769.
Keywords: cyanobacteria; blue-green algae; microcystin; toxins; antibodies; immunoassays
Strain(s): 42102595 
Mihara, S. 1961 Changes in glucosamine content of Chlorella cells during the course of their life cycle. Plant Cell Physiol., 2, 25-29.
Strain(s): 2170 
Mihara, S., Hase, E. 1971 Studies on the vegetative life cycle of Chlamydomonas reinhardtii Dangeard in synchronous culture. I. Some characteristics of the cell cycle. Plant Cell Physiol., 12, 225-236.
Strain(s): 2235 
Mihara, S., Hase, E. 1971 Studies on the vegetative life cycle of Chlamydomonas reinhardtii Dangeard in synchronous culture. II. Effects of chloramphenicol and cycloheximide on the length of cell cycle. Plant Cell Physiol., 12, 237-241.
Strain(s): 2235 
Mihara, S., Hase, E. 1975 Studies on the vegetative life cycle of Chlamydomonas reinhardtii Dangeard in synchronous culture. III. Some notes on the process of zoospore liberation. Plant Cell Physiol., 16, 371-375.
Strain(s): 2235 
Mihara, S., Hase, E. 1975 Studies on the vegetative life cycle of Chlamydomonas reinhardtii Dangeard in synchronous culture. IV. Effects of 6-methyl purine on the revolution of the cell cycle. Plant Cell Physiol., 16, 1121-1130.
Strain(s): 2235 
Mihara, S., Hase, E. 1976 A short note on the effects of 6-methyl purine on the revolution of the cell cycle of Chlorella pyrenoidosa in synchronous culture. Plant Cell Physiol., 17, 403-406.
Strain(s): 226 
Mihara, S., Hase, E. 1978 Studies on the vegetative life cycle of Chlamydomonas reinhardi Dangeard in synchronous culture. V. The transition point for the effect of 6-methyl purine in the cell cycle. Plant Cell Physiol., 19, 83-89.
Keywords: cell cycle; Chlamydomonas; 6-methyl purine; transition point
Strain(s): 2235 
Miklaszewska, M., Waleron, M., Morin, N., Calusinska, M., Wilmotte, A., De Marsac, NT., Rippka, R., Waleron, K. 2012 Elucidation of the gas vesicle gene clusters in cyanobacteria of the genus Arthrospira (Oscillatoriales, Cyanophyta) and correlation with ITS phylogeny. Eur. J. Phycol., 47, 233-244.
Keywords: Arthrospira; cyanobacteria; gas vacuoles; gas vesicles; gvpA; gvpC; gvpN; internal transcribed spacer (ITS)
Strain(s): 39 
Mikulic, P., Beardall, J. 2014 Contrasting ecotoxicity effects of zinc on growth and photosynthesis in a neutrophilic alga (Chlamydomonas reinhardtii) and an extremophilic alga (Cyanidium caldarium). Chemosphere, 112, 402-411.
Keywords: Photosynthesis; Algae; Zinc; Extremophile; Neutrophile; Acclimation
Strain(s): 2137 
PubMed: 25048933
DOI: 10.1016/j.chemosphere.2014.04.049
Minoda, A., Nagasawa, K., Hanaoka, M., Horiuchi, M., Takahashi, H., Tanaka, K. 2005 Microarray profiling of plastid gene expression in a unicellular red alga, Cyanidioschyzon merolae. Plant Mol. Biol., 59, 375-385.
Keywords: Cyanidioschyzon merolae; microarray; photosynthesis; plastid; red algae; sigma factor
Strain(s): 3377 
Minoda, A., Sakagami, R., Yagisawa, F., Kuroiwa, T., Tanaka, K. 2004 Improvement of culture conditions and evidence for nuclear transformation by homologous recombination in a red alga, Cyanidioschyzon merolae 10D. Plant Cell Physiol., 45, 667-671.
Keywords: Cultivation; — Cyanidioschyzon merolae; 5-FOA resistance; Homologous recombination; Red algae; Transformation
Strain(s): 3377 
Minoda, A., Weber, A. P. M., Tanaka, K., Miyagishima, S. 2010 Nucleus-independent control of the rubisco operon by the plastid-encoded transcription factor Ycf30 in the red alga Cyanidioschyzon merolae. Plant Physiol., 154, 1532-1540.
Strain(s): 3377 
DOI: 10.1104/pp.110.163188
Misumi, M., Katoh, H., Tomo, T., Sonoike, K. 2016 Relationship between photochemical quenching and non-photochemical quenching in six species of cyanobacteria reveals species difference in redox state and species commonality in energy dissipation. Plant Cell, 57, 1510-1517.
Keywords: Chlorophyll fluorescence measurements; Cyanobacteria; Photochemical quenching; Respiration; State transition; Thermal dissipation
Strain(s): 39 
PubMed: 26712847
DOI: 10.1093/pcp/pcv185
Misumi, M., Sonoike, K. 2017 Characterization of the influence of chlororespiration on the regulation of photosynthesis in the glaucophyte Cyanophora paradoxa. Sci. Rep., 7, 46100 (article ID).
Strain(s): 547 
DOI: 10.1038/srep46100
Misumi, O., Matsuzaki, M., Nozaki, H., Miyagishima, S., Mori, T., Nishida, K., Yagisawa, F., Yoshida, Y., Kuroiwa, H., Kuroiwa, T. 2005 Cyanidioschyzon merolae genome A tool for facilitating comparable studies on organelle biogenesis in photosynthetic eukaryotes. Plant Physiol., 137, 567-585.
Strain(s): 3377 
DOI: 10.1104/pp.104.053991
Mitsuya, A., Nyunoya, T., Tamiya, H. 1953 Prepilot-plant experiment on algal mass culture. In Algal Culture, From Laboratory to Pilot Plant, Carnegie Institution of Washington Publication 600, The Kirby Lithographic Co., Washington D.C., p. 273-281.
Strain(s): 2170 
Miura, K., Yamano, T., Yoshioka, S., Kohinata, T., Inoue, Y., Taniguchi, F., Asamizu, E., Nakamura, Y., Tabata, S., Yamato, S. T., Ohyama, K., Fukuzawa, H. 2004 Expression profiling-based identification of CO2-responsive genes regulated by CCM1 controlling a carbon-concentrating mechanism in Chlamydomonas reinhardtii. Plant Physiol., 135, 1595-1607.
Strain(s): 2235 
DOI: 10.1104/pp.104.041400
Miya, A., Adachi, T., Tazawa, R., Suzuki, S., Kanki, R., Toyobe, M., Oguchi, M. 1994 Gas revitalization by microalgae II. CO2/O2 gas exchange system. CELSS J., 7, 29-34 (in Japanese with English summary).
Keywords: microalgae; CO2/O2 gas exchange system; regenerative life support system
Strain(s): 39 
Miyachi, S. 1959 Effect of poisons upon the mechanism of photosynthesis as studied by the pre-illumination experiments using carbon-14 as a tracer. Plant Cell Physiol., 1, 1-15.
Strain(s): 2170 
Miyachi, S. 1960 Effect of some sulfhydryl reagents on light-induced CO2-fixation in Chlorella. Plant Cell Physiol., 1, 117-130.
Strain(s): 2170 
Miyachi, S. 1962 Turnover of phosphate compounds in Chlorella cells under phosphate deficiency in darkness. Plant Cell Physiol., 3, 1-4.
Strain(s): 2170 
Miyachi, S. 1963 Metabolism of inorganic polyphosphates in growing Chlorella cells. In Photosynthes Mechanisms of Green Plants, Eds. by Shibata, K. et al., National Academy of Sciences - National Research Council, 1145, 688-697.
Strain(s): 2170 
Miyachi, S. 1979 Light-enhanced dark CO2 fixation in CO3 plants. In Encyclopedia of Plant Physiology, New Series, 6, Eds. by Gibbs, M. & Latzko, E., Springer-Verlag, Berlin, p. 68-76.
Strain(s): 2170 
Miyachi, S., Hirokawa, T., Tamiya, H. 1955 Effect of quinone on the light-induced capacity of carbon dioxide fixation in green algae. J. Biochem., 42, 737-743.
Strain(s): 2170 
Miyachi, S., Hirokawa, T., Tamiya, H. 1957 The "background" CO2 fixation occurring in green cells and its possible relation to the mechanism of photosynthesis. In Research in Photosynthesis, Eds. by Gaffron, H. et al., Intersc. Publ. Inc., New York, p. 205-212.
Strain(s): 2170 
Miyachi, S., Hirosawa, T., Tsuzuki, M. 1984 Regulation of photosynthetic carbon metabolism in microalgae by wavelength of incident light and by CO2 concentration. In Advances in Photosynthesis Research, Vol. 3, Ed. by Sybesma, C., M. Ninhoff / Dr. W. Junk Publishers, Hague, p. 565-572.
Strain(s): 3277 
Miyachi, S., Hogetsu, D. 1970 Effects of preillumination with light of different wagelengths on subsequent dark CO2-fixation in Chlorella cells. Can. J. Bot., 48, 1203-1207.
Strain(s): 2170 
DOI: 10.1139/b70-179
Miyachi, S., Hogetsu, D., Miyachi, S. 1977 Effect of environmental factors on photosynthetic carbon metabolism. In Photosynthetic CO2 Assimilation and Photorespiration, Eds. by Vaklinova, S. G. et al., Publishing House of Bulgarian Academy of Science, Sofia, p. 15-30.
Strain(s): 2160 
Miyachi, S., Izawa, S., Tamiya, H. 1955 Effect of oxygen on the capacity of carbon dioxide fixation by green algae. J. Biochem., 42, 221-244.
Strain(s): 2170 
Miyachi, S., Kamiya, A., Muto, S. 1977 Isolation of peroxisomes from colorless Chlorella mutant cells and intracellular localization of isocitratelyase, malate synthase and phosphoenolpyruvate carboxylase. Plant Cell Physiol., Spec. Iss. (Photosynthetic Organelles), 347-353.
Strain(s): 2162 
Miyachi, S., Kanai, R., Benson, A. A. 1968 Aerobically bound CO2 in Chlorella cells. In Comparative Biochemistry and Biophysics of Photosynthesis, Eds. by Shibata, K. et al., University of Tokyo Press, Tokyo, p. 246-252.
Strain(s): 2170 
Miyachi, S., Kanai, R., Miyachi, S., Aoki, S. 1964 Metabolic roles of inorganic polyphosphates in Chlorella cells. Biochim. Biophys. Acta, 93, 623-634.
Strain(s): 2170 
Miyachi, S., Miyachi, S, Tamiya, H. 1962 Effect of preillumination on the incorporation of sulfur in the lipid fraction of Chlorella cells. Plant Cell Physiol., 3, 193-196.
Strain(s): 2170 
Miyachi, S., Miyachi, S. 1961 Modes of formation of phosphate compounds and their turnover in Chlorella cells during the process of life cycle as studied by the technique of synchronous culture. Plant Cell Physiol., 2, 415-424.
Strain(s): 2170 
Miyachi, S., Miyachi, S. 1966 Sulfolipid metabolism in Chlorella. Plant Physiol., 41, 479-486.
Strain(s): 2170 
DOI: 10.1104/pp.41.3.479
Miyachi, S., Miyachi, S. 1985 Ammonia induces starch degradation in Chlorella cells. Plant Cell Physiol., 26, 245-252.
Keywords: ammonia effect; Chlorella; dark CO2 fixation; starch degradation; sucrose formation
Strain(s): 687215721602170 
Miyachi, S., Miyachi, S. 1987 Some biochemical changes related to starch breakdown induced by blue light illumination and by addition of ammonia to Chlorella cells. Plant Cell Physiol., 28, 309-314.
Keywords: ammonia; adenylates; blue light; Chlorella; orthophosphate; phosphorylase
Strain(s): 2160 
Miyachi, S., Miyachi, S., Benson, A. A. 1965 Metabolism of phospholipids and galactolipids by Chlorella cells. Plant Cell Physiol., 6, 789-792.
Strain(s): 2170 
Miyachi, S., Oh-hama, T., Ogasawara, N. 1968 Effects of flash light of different wagelengths on dark 14CO2-fixation in Chlorella cells. In Comparative Biochemistry and Biophysics of Photosynthesis, Eds. by Shibata, K. et al., University of Tokyo Press, Tokyo, p. 400-407.
Strain(s): 2170 
Miyachi, S., Oh-hama, T., Tamiya, H. 1960 Effect of CO2 on the levels of DPNH and TPNH in pre-illuminated Chlorella cells. Plant Cell Physiol., 1, 151-153.
Strain(s): 2170 
Miyachi, S., Okabe, K. 1976 Oxygen enhancement of photosynthesis in Anacystis nidulans cells. Plant Cell Physiol., 17, 973-986.
Strain(s): 20933277 
Miyachi, S., Shiraiwa, Y. 1979 Form of inorganic carbon utilized for photosynthesis in Chlorella vulgaris 11h cells. Plant Cell Physiol., 20, 341-348.
Keywords: carbon dioxide fixation; carbonic anbydrase; Chlorella; photosynthesis; transport of CO2
Strain(s): 2160 
Miyachi, S., Tamiya, H. 1961 Distribution and turnover of phosphate compounds in growing Chlorella cells. Plant Cell Physiol., 2, 405-414.
Strain(s): 2170 
Miyachi, S., Tamiya, H. 1961 Some observations on the phosphorus metabolism in growing Chlorella cells. Biochim. Biophys. Acta, 46, 200-202.
Strain(s): 2170 
Miyachi, S., Tsuzuki, M., Aizawa, K. 1985 Factors which enhance photosynthesis in microalgae under limiting CO2 concentrations. In Kinetics of Photosynthetic Carbon Metabolism in C3-plants. II. Electron Transport, Transport of CO2, Mathematical Models, Eds. by Viil, J. et al., Akademiya Nauka, Estonia SSR, p. 88-92.
Strain(s): 2235 
Miyachi, S., Tsuzuki, M., Avramova, S. T. 1983 Utilization modes of inorganic carbon for photosynthesis in various species of Chlorella. Plant Cell Physiol., 24, 441-451.
Keywords: bicarbonate fixation; carbonic anhydrase; Chlorella; photosynthetic CO2-fixation
Strain(s): 687209321572160 
Miyachi, S., Tsuzuki, M., Maruyama, I., Ganter, M., Miyachi, S. 1986 Effects of CO2 concentration during growth on the intracellular structure of Chlorella and Scenedesmus (Chlorophyta). J. Phycol., 22, 313-319.
Keywords: Chlorella; CO2 concentration; electron microscopy; pyrenoid starch; Scenedesmus
Strain(s): 6872157216021702280 
Miyachi, S., Tsuzuki, M., Yagawa, Y. 1985 Carbonic anhydrase in various microalgae. In Inorganic Carbon Uptake by Aquatic Photosynthetic Organisms, Eds. by Lucas, W. J. & Berry, J. A., American Society of Plant Physiologists, Rockville, Md, p. 145-154.
Strain(s): 20932160 
Miyaghishim, S., Nishida, K., Mori, T., Matsuzaki, M., Higashiyama, T., Kuroiwa, H., Kuroiwa, T. 2003 A plant-specific dynamin-related protein forms a ring at the chloroplast division site. Plant Cell, 15, 655-665.
Strain(s): 3377 
PubMed: 12615939
DOI: 10.1105/tpc.009373
Miyagishima, S., Suzuki, K., Okazaki, K., Kabeya, Y. 2012 Expression of the nucleus-encoded chloroplast division genes and proteins regulated by the algal cell cycle. Mol. Biol. Evol., 29, 2957-2970.
Keywords: cell cycle; chloroplast division; endosymbiosis; endosymbiotic gene transfer
Strain(s): 296484133221703377 
PubMed: 22490821
DOI: 10.1093/molbev/mss102
Miyagishima, S., Takahara, M., Kuroiwa, T. 2001a Novel filaments 5 nm diameter constitute the cytosolic ring of the plastid division apparatus. Plant Cell, 13, 707-721.
Strain(s): 3377 
PubMed: 11251107
DOI: 10.1105/tpc.13.3.707
Miyagishima, S., Takahara, M., Mori, T., Kuroiwa, H., Higashiyama, T., Kuroiwa, T. 2001b Plastid division is driven by a complex mechanism that involves differential transition of the bacterial and eukaryotic division rings. Plant Cell, 13, 2257-2268.
Strain(s): 3377 
PubMed: 11595800
DOI: 10.1105/tpc.010185
Miyashita, S., Groombridge, A. S., Fujii, S., Minoda, A., Takatsu, A., Hioki, A., Chiba, K., Inagaki, K. 2014 Highly efficient single-cell analysis of microbial cells by time-resolved inductively coupled plasma mass spectrometry. J. Anal. At. Spectrom., 29, 1598-1606.
Strain(s): 3377 
Miyoshi, Y., Tsubo, Y. 1969 Permanent bleaching of Euglena by chloramphenicol. Plant Cell Physiol., 10, 221-225.
Strain(s): 48 
Mizoguchi, T., Kimura, Y., Yoshitomi, T., Tamiaki, H. 2011 The stereochemistry of chlorophyll-c3 from the haptophyte Emiliania huxleyi: the (132R)-enantiomers of chlorophylls-c are exclusively selected as the photosynthetically active pigments in chromophyte algae. Biochim. Biophys. Acta, 1807, 1467-1473.
Keywords: chlorophyll-c; chiral HPLC; enantioimer; chromophyte algae; light-harvesting complexes
Strain(s): 71281696837 
Mizuno, Y., Sato, A., Watanabe, K., Hirata, A., Takeshita, T., Ota, S., Sato, N., Zachleder, V., Tsuzuki, M., Kawano, S. 2013 Sequential accumulation of starch and lipid induced by sulfur deficiency in Chlorella and Parachlorella species. Biores. Technol., 129, 150-155.
Keywords: Sulfur deficiency; Chlorella spp.; Parachlorella kessleri; Starch; Lipids
Strain(s): 2169 
DOI: 10.1016/j.biortech.2012.11.030
Mochida, K., Onduka, T., Amano, H., Ito, M., Tanaka, H., Fujii, K. 2012 Use of species sensitivity distributions to predict no-effect concentrations of an antifouling biocide, pyridine triphenylborane, for marine organisms. Mar. Pollut. Bull., 64, 2807-2814.
Keywords: Algal growth inhibition test; Bayesian inference; Crustacean immobilization test; Fish acute toxicity; Primary risk analysis
Strain(s): 324 
Mogi, K., Fujii, T. 2012 Evaluation of ethanol toxicity to oil producing algae using a microfluidic device. Proceedings of the 16th International Conference on Miniaturized Systems for Chemistry and Life Sciences, Okinawa, Japan 2012, pp. 857-859.
Keywords: Microalgae; Botryococcus braunii; Toxicity assay; Vernier wall
Strain(s): 836 
Mori, F., Erata, M., Watanabe, M. M. 2002 Cryopreservation of cyanobacteria and green algae in the NIES-Collection. Microbiol. Cult. Coll., 18, 45-55.
Keywords: cryopreservation; cyanobacteria; green algae; FDA staining method; NIES-Collection
Strain(s): 1922232425262728293031323334353637383944454650515253545556576061626364656667707475787980818789909192939495979899100102105106107108109110111112119120123124127128129130131132133134135137138139144147148150151152153154155156157158159160162163164166167168169170171172173174175176177178179180181182183185186187188189191192193194195197198199200201202203205206207208209210211212213214215216217224226227228229230231232241242243244246248259262263266267268271287288289290294295297298299300301302303305306308309310311312313329336337338339340341342349351359360361362375378379380382384385390394396397415418419422423424426427429430431432433434436437438447448449450451452453457458459464468469474478479480481503504505506507509510512514515522523524527528529530531532536537538539540542543544545546564565566567568570572573574575576577579580581584585592593594595596597598604610628630631632633634635636637638639640641642643644645646647648649650651652653655656657658659660661662663664665666667672685686687688689690692693694718719720723724726727728729 
Mori, I. C., Arias-Barreiro, C. R., Koutsaftis, A., Ogo, A., Kawano, T., Yoshizuka, K., Inayat-Hussain, S. H., Aoyama, I. 2015 Toxicity of tetramethylammonium hydroxide to aquatic organisms and its synergistic action with potassium iodide. Chemosphere, 120, 299-304.
Keywords: Tetramethylammonium hydroxide; Potassium iodide; Aquatic toxicity; Synergism; D. magna; Semiconductor wastewater
Strain(s): 35 
PubMed: 25151133
DOI: 10.1016/j.chemosphere.2014.07.011
Morimoto, T., Murakami, N., Nagatsu, A., Sakakibara, J. 1993 Studies on glycolipids. VII. Isolation of two new sulfoquinovosyl diacylglycerols from the green alga Chlorella vulgaris. Chem. Pharm. Bull., 41, 1545-1548.
Keywords: sulfoquinovosyl diacylglycerol (SQDG); glyceroglycolipid; green alga; Chlorella vulgaris; branched fatty acid
Strain(s): 227 
Morimura, Y., Tamiya, H. 1963 Anomalies of the life cycle of Chlorella caused by some anti-metabolites. Maheshwari Comm. Vol., J. Indian Bot. Soc., 42A, 122-129.
Strain(s): 2170 
Morimura, Y., Yanagi, S., Tamiya, H. 1964 Synchronous mass-culture of Chlorella. Plant Cell Physiol., 5, 281-289.
Strain(s): 2170 
Morita, E., Abe, T., Tsuzuki, M., Fujiwara, S., Sato, N., Hirata, A., Sonoike, K., Nozaki, H. 1999 Role of pyrenoids in the CO2-concentrating mechanism: comparative morphology, physiology and molecular phylogenetic analysis of closely related strains of Chlamydomonas and Chloromonas (Volvocales). Planta, 208, 365-372.
Keywords: Chlamydomonas; Chloromonas; CO2-concentrating mechanism; molecular phylogeny; pyrenoid; ribulose-1,5-bisphosphate carboxylase/oxygenase
Strain(s): 447 
Moriya, M., Nakayama, T., Inouye, I. 2002 A new class of the Stramenopiles, Placididea Classis nova: description of Placidia cafeteriopsis gen. et sp. nov. Protist, 153, 143-156.
Strain(s): 1014 
PubMed: 12125756
DOI: 10.1078/1434-4610-00093
Morsy, N., Matsuoka, S., Houdai, T., Matsumori, N., Adachi, S., Murata, M., Iwashita, T., Fujita, T. 2005 Isolation and structure elucidation of a new amphidinol with a truncated polyhydroxyl chain from Amphidinium klebsii. Tetrahedron, 61, 8606-8610.
Keywords: amphidinol; Amphidinium; AM7; AM3; CID MS/MS
Strain(s): 613 
Motwalli, O., Essack, M., Jankovic, BR., Ji, B., Liu, X., Ansari, HR., Hoehndorf, R., Gao, X., Arold, ST., Mineta, K., Archer, JA., Gojobori, T., Mijakovic, I., Bajic, VB. 2017 In silico screening for candidate chassis strains of free fatty acid-producing cyanobacteria. BMC Genomics, 18, 33 (article ID).
Keywords: Cyanobacteria; Free fatty acids; Biofuel; Screening method; Cell factories; Bioinformatics; Optimization; Computer science
Strain(s): 39 
PubMed: 2805677
DOI: 10.1186/s12864-016-3389-4
Munekage, Y., Iwasaki, N., Le, T. X., Hasegawa, H., Natukawa, Y., Kikuhara, S. 2002 Studies on the distribution of antibiotics in water, suspended solid, bottom mud in semi-enclosed sea and its accumulation in plankton. Proceedings of the 12th International Offshore and Polar Engineering Conference, Kitakyushu, Japan 2002, p. 425-431.
Keywords: antibiotics; distribution; mud; sedimentation particles; accumulation; absorption; plankton
Strain(s): 17613 
Mungpakdee, S., Shinzato, C., Takeuchi, T., Kawashima, T., Koyanagi, R., Hisata, K., Tanaka, M., Goto, H., Fujie, M., Lin, S., Satoh, N., Shoguchi, E. 2014 Massive gene transfer and extensive RNA editing of a symbiotic dinoflagellate plastid genome. Genome Biol. Evol., 6, 1408-1422.
Keywords: RNA editing; plastid-associated genes; dinoflagellate; Symbiodinium minutum; hydropathy; light-harvesting complex proteins; minicircles
Strain(s): 3808 
PubMed: 24881086
DOI: 10.1093/gbe/evu109
Murakami, M., Ishida, K., Okino, T., Okita, Y., Matsuda, H., Yamaguchi, K. 1995 Aeruginosins 98-A and B, trypsin inhibitors from the blue-green alga Microcystis aeruginosa (NIES-98). Tetrahedron Letters, 36, 2785-2788.
Strain(s): 98 
Murakami, M., Itou, Y., Ishida, K., Shin, H. J. 1999 Prenylagaramides A and B, new cyclic peptides from two strains of Oscillatoria agardhii. J. Nat. Prod., 62, 752-755.
Strain(s): 205596 
Murakami, M., Okita, Y., Matsuda, H., Okino, T., Yamaguchi, K. 1994 Aeruginosin 298-A, a thrombin and trypsin inhibitor from the blue-green alga Microcystis aeruginosa (NIES-298). Tetrahedron Letters, 35, 3129-3132.
Strain(s): 298 
Murakami, M., Sato, N., Anegawa, A., Nakada, N., Harada, A., Komatsu, T., Takada, H., Tanaka, H., Ono, Y., Furumai, H. 2008 Multiple evaluations of the removal of pollutants in road runoff by soil infiltration. Wat. Res., 42, 2745-2755.
Keywords: Groundwater contamination; Infiltration facility; Road dust; Urban runoff; Soil infiltration column test; Water-soluble micropollutants
Strain(s): 35 
Murakami, M., Sun, Q., Ishida, K., Matsuda, H., Okino, T., Yamaguchi, K. 1997 Microviridins, elastase inhibitors from the cyanobacterium Nostoc minutum (NIES-26). Phytochemistry, 45, 1197-1202.
Keywords: Nostoc minutum; Cyanophyceae; cyclic peptide; microviridin G; microviridin H; elastase inhibitor; protease inhibitor
Strain(s): 26 
Murakami, M., Suzuki, S., Itou, Y., Kodani, S., Ishida, K. 2000 New anabaenopeptins, potent carboxypeptidase-A inhibitors from the cyanobacterium Aphanizomenon flos-aquae. J. Nat. Prod., 63, 1280-1282.
Strain(s): 81 
Murakami, N., Shirahashi, H., Nagatsu, A., Sakakibara, J. 1992 Two unsaturated 9R-hydroxy fatty acids from the cyanobacterium Anabaena flos-aquae f. flos-aquae. Lipids, 27, 776-778.
Strain(s): 74 
Murakami, N., Shirahashi, H., Nagatsu, A., Sakakibara, J. 1993 Studies on glycolipids. VI. New acyl-distributed glyceroglycolipids from the nitrogen-fixing cyanobacterium Anabaena flos-aquae f. flos-aquae. Chem. Pharm. Bull., 41, 1177-1179.
Keywords: glyceroglycolipid; nitrogen-fixing algae; Anabaena flos-aquae f. flos-aquae; cyanobacterium
Strain(s): 74 
Muramoto, K., Nakada, T., Shitara, T., Hara, Y., Nozaki, H. 2010 Re-examination of the snow algal species Chloromonas miwae (Fukushima) Muramoto et al., comb. nov. (Volvocales, Chlorophyceae) from Japan, based on molecular phylogeny and cultured material. Eur. J. Phycol., 45, 27-37.
Keywords: Carteria miwae; Chloromonas miwae comb. nov.; Chlorophyceae; molecular phylogeny; morphology; sexual cycle; snow algae; taxonomy; Volvocales
Strain(s): 23792380 
DOI: 10.1080/09670260903272607
Murano, F., Fujita, Y. 1967 Comparative studies of photochemical oxidation-reduction reactions in lamellar fragments of various algae and spinach. Plant Cell Physiol., 8, 673-682.
Strain(s): 193748 
Murata, N. 1977 Uphill energy transfer from chlorophyll a to phycobilins in blue-green algae Anabaena variabilis and Anacystis nidulans. Plant Cell Physiol., Spec. Iss. (Photosynthetic Organelles), 9-13.
Strain(s): 20933277 
Murata, N., Wada, H., Hirasawa, R. 1984 Reversible and irreversible inactivation of photosynthesis in relation to the lipid phases of membranes in the blue-green algae (cyanobacteria) Anacystis nidulans and Anabaena variabilis. Plant Cell Physiol., 25, 1027-1032.
Strain(s): 20933277 
Nagai, H., Satake, M., Murata, M., Yasumoto, T. 1990 Screening of marine phytoplankton for antifungal substances. In Toxic Marine Phyto-plankton, Eds. by Graneli, E., Sundstrom, B., Edler, L. & Anderson, D. M., Elsevier Science Pub., New York, p. 385-390.
Strain(s): 11215 
Nagai, M., Oguri, M., Shibata, T. 2015 Characterization of light-controlled Volvox as movable microvalve element assembled in multilayer microfluidic device. Jpn. J. Appl. Phys., 54, 067001 (article ID).
Strain(s): 865 
DOI: 10.7567/JJAP.54.067001
Nagai, T., Horio, T., Yokoyama, A., Kamiya, T., Takano, H., Makino, T. 2012 Ecological risk assessment of on-site soil washing with iron(III) chloride in cadmium-contaminated paddy field. Ecotox. Environ. Safe., 80, 84-90.
Keywords: Risk assessment; Soil washing; Bioassay; Species sensitivity distribution
Strain(s): 35 
Nagai, T., Imai, A., Matsushige, K., Fukushima, T. 2005 Limiting nutrients on the growth of bloom-forming cyanobacteria with special focus on iron speciation. Verh. Internat. Verein. Limnol., 29, 949-952.
Keywords: limiting nutrient; algal growth potential test; speciation; iron
Strain(s): 44 
Nagai, T., Imai, A., Matsushige, K., Fukushima, T. 2006 Effect of iron complexation with dissolved organic matter on the growth of cyanobacteria in a eutrophic lake. Aquat. Microb. Ecol., 44, 231-239.
Keywords: dissolved organic matter; DOM; cyanobacteria; iron; organic complexation
Strain(s): 44 
Nagai, T., Imai, A., Matsushige, K., Fukushima, T. 2007 Growth characteristics and growth modeling of Microcystis aeruginosa and Planktothrix agardhii under iron limitation. Limnology, 8, 261-270.
Keywords: iron; growth rate; uptake rate; model simulation; cyanobacteria
Strain(s): 44 
Nagai, T., Ishihara, S., Yokoyama, A., Iwafune, T. 2011 Effects of four paddy herbicides on algal cell variability and the relationship with population recovery. Environ. Toxicol. Chem., 30, 1898-1905.
Keywords: pesticide; ecological risk; flow cytometry; green algae
Strain(s): 35 
Nagai, T., Taya, K., Annoh, H., Ishihara, S. 2013 Application of a fluorometric microplate algal toxicity assay for riverine periphytic algal species. Ecotox. Environ. Safe., 94, 37-44.
Keywords: Attached algae; In-vivo fluorescence; Pesticides; Species sensitivity distribution
Strain(s): 3571414487512797 
DOI: 10.1016/j.ecoenv.2013.04.020
Nagai, T., Taya, K., Yoda, I. 2016 Comparative toxicity of 20 herbicides to 5 periphytic algae and the relationship with mode of action. Environ. Toxicol. Chem., 35, 368-375.
Keywords: Attached algae; In-vivo fluorescence; Pesticides; Species sensitivity distribution
Strain(s): 71487512797 
DOI: 10.1002/etc.3150
Nagao, M., Matsui, K., Uemura, M. 2008 Klebsormidium flaccidum, a charophycean green alga, exhibits cold acclimation that is closely associated with compatible solute accumulation and ultrastructural changes. Plant Cell Environ., 31, 872-885.
Keywords: amino acid; Charophyceae; freezing tolerance; osmotic strength; soluble sugar; ultrastructure
Strain(s): 2408 
PubMed: 18315534
DOI: 10.1111/j.1365-3040.2008.01804.x
Nagao, M., Uemura, M. 2006 Cold acclimation of green alga (Charophyceae) Klebsormidium flaccidum phylogenetically related to land plants: freezing tolerance, cell structure and compatible solute composition. Plant Cell Physiol., 47, Suppl., 223.
Strain(s): 2408 
Nagao, M., Uemura, M. 2007 Isolation of sucrose phosphate and glutamate decarboxylase genes of a green alga Klebsormidium flaccidum associated with cold acclimation. Plant Cell Physiol., 48, Suppl., 237.
Strain(s): 2408 
Nagao, M., Uemura, M. 2012 Sucrose phosphate phosphatase in the green alga Klebsormidium flaccidum (Streptophyta) lacks an extensive C-terminal domain and differs from that of land plants. Planta, 235, 851-861.
Strain(s): 2408 
DOI: 10.1007/s00425-011-1550-5
Nagase, H., Hirooka, T., Ehara, Y., Yamashita, R, Tanimoto, S., Hirata, K., Miyamoto, K. 2005 NOx removal system for exhaust gas using freshwater microalgae. J. Environ. Biotech., 5, 37-41 (in Japanese with English summary).
Keywords: microalgae; nitrogen oxides; treatment of exhaust gas; NO sensor; reactor
Strain(s): 23 
Nagase, H., Inthorn, D., Isaji, Y., Oda, A., Hirata, K., Miyamoto, K. 1997 Selective cadmium removal from hard water using NaOH-treated cells of the cyanobacterium Tolypothrix tenuis. J. Ferment. Bioeng., 84, 151-154.
Keywords: cyanobacteria; cadmium; calcium; magnecium; hard water; sodium hydroxide
Strain(s): 23 
Nagase, H., Inthorn, D., Oda, A., Nishimura, J., Kajiwara, Y., Park, M.-O., Hirata, K., Miyamoto, K. 2005 Improvement of selective removal of heavy metals in cyanobacteria by NaOH treatment. J. Biosci. Bioeng., 99, 372-377.
Keywords: cyanobacteria; cadmium; zinc; copper; lead; hard water
Strain(s): 2344 
Nagashima, H., Fukuda, I. 1983 Floridosides in unicellular hot spring algae. Phytochemistry, 22, 1949-1951.
Keywords: Cyanidium caldarium; Chroococcidiopsis sp.; hot spring algae; chemotaxonomy; low MW carbohydrates; floridoside; iso-floridoside; autotroph; heterotroph
Strain(s): 2137 
Nagasoe, S., Toda, S., Shimasaki, Y., Osima, Y., Uchida, T., Honjo, T. 2006 Growth inhibition of Gyrodinium instriatum (Dinophyceae) by Skeletonema costatum (Bacillariophyceae). Afr. J. Mar. Sci., 28, 325-329.
Keywords: allelopathy; Gyrodinium instriatum; Skeletonema costatum; species interaction
Strain(s): 324 
Naito, K., Imai, I., Nakahara, H. 2008 Complexation of iron by microbial siderophores and effects of iron chelates on the growth of marine microalgae causing red tides. Phycol. Res., 56, 58-67.
Keywords: chelate; growth; iron; microalgae; red tide; siderophore
Strain(s): 1 
Naito, K., Suzuki, M., Mito, S., Hasegawa, H., Matsui, M., Imai, I. 2006 Effects of the substances secreted from Closterium aciculare (Charophyceae, Chlorophyta) on the growth of freshwater phytoplankton under iron-deficient conditions. Plankton Benthos Res., 1, 191-199.
Keywords: Closterium aciculare; freshwater phytoplankton; growth; iron-complexing ligand; iron-deficient conditions
Strain(s): 215248528 
Nakada, T., Ito, T., Tomita, M. 2016 18S ribosomal RNA gene phylogeny of a colonial volvocalean lineage (Tetrabanaceae-Goniaceae-Volvocaceae, Volvocales, Chlorophyceae) and its close relatives. J. Jpn. Bot., 91, 345-354.
Keywords: 18S rRNA; colonial; green algae; molecular phylogeny; unicellular; Volvocales
Strain(s): 418456460474541544545564566571654666721725728735737867877879880881882883136222422246226625673388 
Nakada, T., Matsuzaki, R., Krienitz, L., Tomiwa, M., Nozaki, H. 2015 Taxonomic reassessment of strains formerly classified as Chloromonas insignis (Volvocales, Chlorophyceae) and description of Gloeomonas anomalipyrenoides sp. nov. Acta Phytotax. Geobot., 66, 23-33.
Keywords: 18S rRNA; Chloromonas; culture strain; Gloeomonas; light microscopy; new species; phycology; phylogeny
Strain(s): 447364036413642 
Nakada, T., Nakazawa, A., Nozaki, H. 2005 Two species of Chlorogonium (Volvocales, Chlorophyceae) from Japan. J. Jpn. Bot., 80, 197-207.
Keywords: Chlorogonium; Chlorophyceae; culture strain; distribution; taxonomy
Strain(s): 1357135813591360 
Nakada, T., Nozaki, H. 2007 Re-evaluation of three Chlorogonium (Volvocales, Chlorophyceae) species based on 18S ribosomal RNA gene phylogeny. Eur. J. Phycol., 42, 177-182.
Keywords: Chlorogonium; Chlorophyceae; culture strain; molecular phylogeny; monophyletic species; 18S rRNA; species taxonomy
Strain(s): 69213571358 
Nakada, T., Nozaki, H. 2007 Two species of Chlamydomonas (Volvocales, Chlorophyceae) new to Japan. J. Jpn. Bot., 82, 179-189.
Keywords: Chlamydomonas perpusilla; Chlamydomonas pumilio; culture strain; taxonomy
Strain(s): 18481849 
Nakada, T., Nozaki, H. 2009 Taxonomic study of two new genera of fusiform green flagellates, Tabris gen. nov. and Hamakko gen. nov. (Volvocales, Chlorophyceae). J. Phycol., 45, 482-492.
Keywords: Chlorogonium; Hamakko gen. nov.; molecular phylogeny; Tabris gen. nov.; taxonomy; ultrastructure; Volvocales
Strain(s): 637748752760968135813591849186922942295 
Nakada, T., Nozaki, H., Pröschold, T. 2008 Molecular phylogeny, ultrastructure, and taxonomic revision of Chlorogonium (Chlorophyta): emendation of Chlorogonium and description of Gungnir gen.nov. and Rusalka gen.nov. J. Phycol., 44, 751-760.
Keywords: Chlorogonium; Gungnir gen.nov.; molecular phylogeny; morphology; Rusalka gen.nov.; taxonomy; ultrastructure; Volvocales
Strain(s): 1234396927517557611357135913601869 
Nakada, T., Nozaki, H., Tomita, M. 2012 Light microscopy and phylogenetic analyses of Chlamydomonas species (Volvocales, Chlorophyceae). I. Chlamydomonas pseudomacrostigma and Chlamydomonas media. Acta Phytotax. Geobot., 62, 69-78.
Keywords: 18S rRNA; Chlamydomonas media; Chlamydomonas pseudomacrostigma; light microscopy; molecular phylogeny, phycology
Strain(s): 27432744 
Nakada, T., Shinkawa, H., Ito, T., Tomita, M. 2010 Recharacterization of Chlamydomonas reinhardtii and its relatives with new isolates from Japan. J. Plant Res., 123, 67-78.
Keywords: Chlamydomonas reinhardtii; Chlorophyceae; distribution; phycology; species; taxonomy
Strain(s): 1858 
DOI: 10.1007/s10265-009-0266-0
Nakada, T., Soga, T., Tomita, M., Nozaki, H. 2010 Chlorogonium complexum sp. nov. (Volvocales, Chlorophyceae), and morphological evolution of Chlorogonium. Eur. J. Phycol., 45, 97-107.
Keywords: Chlorogonium complexum sp. nov.; Chlorophyceae; molecular phylogeny; morphology; pyrenoids; taxonomy
Strain(s): 69275275322962297 
DOI: 10.1080/09670260903383263
Nakada, T., Suda, S., Nozaki, H. 2007 A taxonomic study of Hafniomonas (Chlorophyceae) based on a comparative examination of cultured material. J. Phycol., 43, 397-411.
Keywords: Chlorophyceae; Hafniomonas; morphology; new species; taxonomy
Strain(s): 656171417151716171717181720 
Nakada, T., Tomita, M. 2011 Chlamydomonas neoplanoconvexa nom. nov. and its unique phylogenetic position within Volvocales (Chlorophyceae). Phycol. Res., 59, 194-199.
Keywords: Caudivolvoxa; Chlamydomonas neoplanoconvexa nom. nov.; molecular phylogeny; morphology; pyrenoid; Volvocales
Strain(s): 2570 
Nakada, T., Tomita, M. 2014 Light microscopy and phylogenetic asalyses of Chlamydomonas species (Volvocales, Chlorophyceae). II. Molecular phylogeny, secondary Microglena opisthopyren, and M. media, comb. nov. Acta Phytotax. Geobot., 65, 67-73.
Keywords: Chlamydomonas; ITS-2; Microglena; molecular phylogeny; phycology; synonymy
Strain(s): 27432744 
Nakada, T., Tomita, M., Nozaki, H. 2010 Volvulina compacta (Volvocaceae, Chlorophyceae), new to Japan, and its phylogenic position. J. Jpn. Bot., 85, 364-369.
Keywords: molecular phylogeny; taxonomy; Volvocaceae; Volvulina compacta
Strain(s): 2567 
Nakada, T., Tomita, M., Wu, J.-T., Nozaki, H. 2016 Taxonomic revision of Chlamydomonas subg. Amphichloris (Volvocales, Chlorophyceae), with resurrection of the genus Dangeardinia and Descriptions of Ixipapillifera gen. nov. and Rhysamphichloris gen. nov. J. Phycol., 52, 283-304.
Keywords: Chlamydomonas subg.; Amphichloris; Dangeardinia; Ixipapillifera; mitochondria; molecular phylogeny; morphology; new species; Rhysamphichloris; taxonomy; Volvocales
Strain(s): 23202321232225753704370537063707 
DOI: 10.1111/jpy.12397
Nakada, T., Tsuchida, Y., Arakawa, K., Ito, T., Tomita, M. 2014 Hybridization between Japanese and North American Chlamydomonas reinhardtii (Volvocales, Chlorophyceae). Phycol. Res., 62, 232-236.
Keywords: biogeography; Chlamydomonas reinhardtii; Chlorophyceae; mating population; species
Strain(s): 3378337933803381 
Nakada,T., Ota, S. 2016 What is the correct name for the type of Haematococcus Flot. (Volvocales, Chlorophyceae)? Taxon, 65, 343-348.
Keywords: cryopreservation; epitype; Haematococcus; lectotype
Strain(s): 2264 
DOI: 10.12705/652.11
Nakagawa, M., Takamura, Y., Yagi, O. 1987 Isolation and characterization of the slime from a cyanobacterium, Microcystis aeruginosa K-3A. Agric. Biol. Chem., 51, 329-337.
Strain(s): 604 
Nakahara, M., Ito, H., Yano, H., Harimaya, K. 1988 Eutrophication in three reservoirs as the sources of the waterworks in Kobe City. Jpn. J. Water Treat. Biol., 24, 19-24 (in Japanese with English title).
Strain(s): 35 
Nakai, S., Asaoka, S., Okuda, T., Nishijima, W. 2014 Growth inhibition of Microcystis aeruginosa by allelopathic compounds originally isolated from Myriophyllum spicatum: temperature and light effects and evidence of possible major mechanisms. J. Chem. Eng. Japan, 47, 488-493.
Keywords: Allelopathy; Cyanobacterium; Light Intensity Effect; Photosystem II Quantum Yield; Temperature Effect
Strain(s): 87 
Nakai, S., Inoue, Y., Hosomi, M., Murakami, A. 1999 Growth inhibition of blue-green algae by allelopathic effects of macrophytes. Wat. Sci. Tech., 39, 47-53.
Keywords: allelopathy; blue-green algae; coexistence; growth inhibition; macrophyte; Myriophyllum spicatum
Strain(s): 7587512 
Nakai, S., Inoue, Y., Hosomi, M., Murakami, A. 2000 Myriophyllum spicatum-released allelopathic polyphenols inhibiting growth of blue-green algae Microcystis aeruginosa. Wat. Res., 34, 3026-3032.
Keywords: Myriophyllum spicatum; allelochemical; polyphenol; synergistic growth inhibition; autoxidation; blue-green algae
Strain(s): 87 
Nakai, S., Yamada, S., Hosomi, M. 2004 Cyanobacterial growth inhibition effects of fatty acids released from Myriophyllum spicatum. J. Jpn. Soc. Water Environ., 27, 125-130 (in Japanese with English summary).
Keywords: allelochemical; Microcystis aeruginosa; Myriophyllum spicatum; fatty acid; synergistic growth inhibition
Strain(s): 87 
Nakai, S., Yamada, S., Hosomi, M. 2005 Anti-cyanobacterial fatty acids released from Myriophyllum spicatum. Hydrobiologia, 543, 71-78.
Keywords: allelochemical; fatty acid; Microcystis aeruginosa; Myriophyllum spicatum
Strain(s): 87 
Nakai, S., Yamane, S., Hosomi, M. 2000 Algal growth inhibition effects of Myriophyllum spicatum-releasing four allelopathic polyphenols. J. Jpn. Soc. Wat. Environ., 23, 726-730 (in Japanese with English summary).
Keywords: allelochemical; polyphenol; algae; concentration-dependent synergistic growth inhibition; autoxidation
Strain(s): 357187489512 
Nakai, S., Zou, G., Okuda, T., Tsai, T.-Y., Song, X., Nishijima, W., Okada, M. 2010 Anti-cyanobacterial allelopathic effects of plants used for artificial floating islands. Allelopathy J., 26, 113-122.
Keywords: Acorus gramineus; aquatic and terrestrial plants; artificial floating island; Canna generalis; cyanobacterium; growth inhibition; Iris pseudacorus; Lythrum salicaria; Scirpus tabernaemontani; Typha angustifolia
Strain(s): 87 
Nakai, S., Zou, G., Song, X., Pan, Q., Zhou, S., Hosomi, M. 2008 Release of anti-cyanobacterial allelochemicals from aquatic and terrestrial plants applicable for artificial floating islands. J. Water Environ. Technol., 6, 55-63.
Keywords: allelopathy; canna; carboxylic comp.; cyanobacteria; growth inhibition; phenolic comp.; umbrella plant
Strain(s): 87 
Nakajima, A., Horikoshi, T., Sakaguchi, T. 1979 Uptake of copper ion by green microalgae. Agric. Biol. Chem., 43, 1455-1460.
Strain(s): 227322742279 
Nakajima, N., Teramoto, T., Kasai, F., Sano, T., Tamaoki, M., Aono, M., Kubo, A., Kamada, H., Azumi, Y., Saji, H. 2007 Glycosylation of bisphenol A by freshwater microalgae. Chemosphere, 69, 934-941.
Keywords: Metabolite; Glucoside; Galactoside; Endocrine disruptors
Strain(s): 3594151424468763 
PubMed: 17629547
DOI: 10.1016/j.chemosphere.2007.05.088
Nakajima, T., Takahashi, M. 1991 A photo-bioreactor using algal phototaxis for solids-liquid separation. Wat. Res., 25, 1243-1247.
Keywords: wastewater treatment; microalgae; Euglena gracilis; phototaxis; solids-liquid separation; bioreactor; photo-clarifier
Strain(s): 48 
Nakamura, H. 1993 Results of AGP experiments [AGP, T-P, PO4-P no shiken oyobi bunsekikekka]. Unpublished report in Ebara Yujiraito Co. Ltd,. 32 pp. (in Japanese without English title).
Strain(s): 35 
Nakamura, H., Sawada, K., Araie, H., Suzuki, I., Shiraiwa, Y. 2015 n-Nonacosadienes from the marine haptophytes Emiliania huxleyi and Gephyrocapsa oceanica. Phytochemistry, 111, 107-113.
Keywords: Emiliania huxleyi; Gephyrocapsa oceanica; Haptophyte; Nonacosadiene; Noelaerhabdaceae; Long chain alkene; Biomarker
Strain(s): 8371315 
DOI: 10.1016/j.phytochem.2014.12.023
Nakamura, M., Yamagishi, M., Yoshizaki, F., Sugimura, Y. 1992 The syntheses of plastocyanin and cytochrome c-553 are regulated by copper at the pre-translational level in a green alga, Pediastrum boryanum. J. Biochem., 111, 219-224.
Strain(s): 301 
Nakamura, M., Yoshizaki, F., Sugimura, Y. 2000 Accumulation of plastocyanin mRNA lacking 5' region in the green alga Pediastrum boryanum grown under copper-deficient conditions. Plant Cell Physiol., 41, 33-41.
Keywords: cDNA sequence; copper regulation; green alga; mRNA accumulation; Pediastrum boryanum; plastocyanin
Strain(s): 301 
Nakamura, Y. 1983 Change in molecular weight distribution in starch when degraded at different temperatures in Chlorella vulgaris. Plant Sci. Lett., 30, 259-265.
Keywords: Chlorella; photosynthetic CO2 fixation; starch metabolism; temperature
Strain(s): 2160 
Nakamura, Y. 1987 Effects of growth conditions on nitrate, ammonium and phosphate uptake by Chattonella antiqua. Res. Rep. Natl. Inst. Environ. Stud., No. 110, 115-126 (in Japanese with English summary).
Strain(s): 1 
Nakamura, Y. 1998 Growth and grazing of a large heterotrophic dinoflagellate, Noctiluca scintillans, in laboratory cultures. J. Plankton Res., 20, 1711-1720
Strain(s): 2 
DOI: 10.1093/plankt/20.9.1711
Nakamura, Y., Imamura, M. 1983 Change in properties of starch when photosynthesized at different temperature in Chlorella vulgaris. Plant Sci. Lett., 31, 123-131.
Keywords: Chlorella; photosynthetic CO2 fixation; starch metabolism; temperature
Strain(s): 2160 
Nakamura, Y., Imamura, M. 1983 Characteristics of a-glucan phosphorylase from Chlorella vulgaris. Phytochemistry, 22, 835-840.
Keywords: Chlorella vulgaris; Chlorophyceae; phospholyrase; starch; ADP-glucose; UDP-glucose
Strain(s): 2160 
Nakamura, Y., Imamura, M. 1983 Characterization of Chlorella phosphorylase: the glucan specificity and effect of temperature. Phytochemistry, 22, 2395-2399.
Keywords: Chlorella vulgaris; Chlorophyceae; phosphorylase; photosynthesis; starch; temperature
Strain(s): 2160 
Nakamura, Y., Imamura, M. 1985 Regulation of ADP-glucose pyrophosphorylase from Chlorella vulgaris. Plant Physiol., 78, 601-605.
Strain(s): 2160 
DOI: 10.1104/pp.78.3.601
Nakamura, Y., Miyachi, S. 1980 Effects of temperature and CO2 concentration on photosynthetic CO2 fixation by Chlorella. Plant Cell Physiol., 21, 765-774.
Keywords: Chlorella; CO2 fixation; glucose-polymer; glycolate; sucrose; temperature
Strain(s): 2160 
Nakamura, Y., Miyachi, S. 1980 Effects of temperature on glycolate metabolism in Chlorella. Plant Cell Physiol., 21, 1541-1549.
Keywords: Chlorella; CO2 fixation; glucose-polymer; glycolate; sucrose; temperature
Strain(s): 2160 
Nakamura, Y., Miyachi, S. 1982 Changes in starch photosynthesized at different temperature in Chlorella. Plant Sci. Lett., 27, 1-6.
Strain(s): 2160 
Nakamura, Y., Miyachi, S. 1982 Effect of temperature on starch degradation in Chlorella vulgaris 11h cells. Plant Cell Physiol., 23, 333-341.
Keywords: Chlorella vulgaris; CO2 fixation; starch; sucrose; temperature (starch degradation)
Strain(s): 2160 
Nakamura, Y., Sawai, K., Mochida, M., Watanabe, M. 1987 An approach to estimate the limiting nutrient of Chattonella antiqua in the Seto Inland Sea - Semicontinuous culture using natural seawater. Res. Rep. Natl. Inst. Environ. Stud., No. 110, 197-212 (in Japanese with English summary).
Strain(s): 1 
Nakamura, Y., Sawai, K., Watanabe, M. 1987 Growth inhibition of a red tide flagellate, Chattonella antiqua by cupric ion. Res. Rep. Natl. Inst. Environ. Stud., No. 110, 127-138 (in Japanese with English summary).
Strain(s): 1 
Nakamura, Y., Takahashi, J-I., Sakurai, A., Inaba, Y., Suzuki, E., Nihei, S., Fujiwara, S., Tsuzuki, M., Miyashita, H., Ikemoto, H., Kawachi, M., Sekiguchi, H., Kurano, N. 2005 Some Cyanobacteria synthesize semi-amylopectin type α-polyglucans instead of glycogen. Plant Cell Physiol., 46, 539-545.
Keywords: Amylopectin; Cyanobacteria; Glycogen; α-Polyglucan; Starch
Strain(s): 36592 
DOI: 10.1093/pcp/pci045
Nakamura, Y., Watanabe, M. M. 1983 Growth characteristics of Chattonella antiqua Part 2. Effects of nutrients on growth. J. Oceanogr. Soc. Japan, 39, 151-155.
Strain(s): 1 
Nakamura, Y., Watanabe, M. M. 1983 Growth characteristics of Chattonella antiqua (Raphidophyceae). Part 1. Effects of temperature, salinity, light intensity and pH on growth. J. Oceanogr. Soc. Japan, 39, 110-114.
Strain(s): 1 
Nakamura, Y., Watanabe, M. M. 1983 Nitrate and phosphate uptake kinetics of Chattonella antiqua grown in light/dark cycles. J. Oceanogr. Soc. Japan, 39, 167-170.
Strain(s): 1 
Nakamura, Y., Watanabe, M. M. 1984 Diurnal vertical migration of a red tide flagellate, Chattonella antiqua with special reference to the ecological role. Res. Rep. Natl. Inst. Environ. Stud., No. 63, 97-102 (in Japanese with English summary).
Strain(s): 1 
Nakamura, Y., Watanabe, M. M. 1984 Effects of nutrients on the growth of Chattonella antiqua. Res. Rep. Natl. Inst. Environ. Stud., No. 63, 87-95 (in Japanese with English summary).
Strain(s): 1 
Nakamura, Y., Watanabe, M. M. 1984 Effects of temperature, salinity, light intensity and pH on the growth of Chattonella antiqua. Res. Rep. Natl. Inst. Environ. Stud., No. 63, 79-85 (in Japanese with English summary).
Strain(s): 1 
Nakamura, Y., Watanabe, M. M. 1984 Nitrate and phosphate uptake kinetics of Chattonella antiqua grown in light/dark cycles. Res. Rep. Natl. Inst. Environ. Stud., No. 63, 103-109 (in Japanese with English summary).
Strain(s): 1 
Nakamura, Y., Watanabe, M. M., Watanabe, M. 1982 The effect of various environmental factors on the growth yield of red tide algae. I. Chattonella antiqua. Res. Rep. Natl. Inst. Environ. Stud., No. 30, 53-70 (in Japanese with English summary).
Strain(s): 1 
Nakanishi, K., Deuchi, K., Kuwano, K. 2012 Cryopreservation of four valuable strains of microalgae, including viability and characteristics during 15 years of cryostorage. J. Appl. Phycol., 24, 1381-1385.
Keywords: Cryopreservation; Cryoprotectant; Chlorella vulgaris; Nannochloropsis oculata; Tetraselmis tetrathele; Chlorophyll
Strain(s): 21452170 
Nakano, S., Chang, K.-H., Shijima, A., Miyamoto, H., Sato, Y., Noto, Y., Ha, J.-Y., Sakamoto, M. 2014 A usage of CO 2 hydrate: Convenient method to increase CO 2 concentration in culturing algae. Biores. Technol., 172, 444-448.
Keywords: CO 2; Algal culture; Pseudokirchneriella; Population growth
Strain(s): 35 
DOI: 10.1016/j.biortech.2014.09.019
Nakano, T., Isagi, Y. 1987 Dictyochloropsis irregularis sp. nov. (Chlorococcales, Chloro-phyceae) isolated from the surface of bark Phycologia, 26, 222-227.
Strain(s): 378 
Nakashima, Y., Egami, Y., Kimura, M., Wakimoto, T. 2016 Metagenomic analysis of the sponge Discodermia reveals the production of the cyanobacterial natural product kasumigamide by ‘Entotheonella’. PLoS One, 11, e0164468 (article ID).
Strain(s): 87 
DOI: 10.1371/journal.pone.0164468
Nakasugi, K., Alexova, R., Svenson, C. J., Neilan, B. A. 2007 Functional Analysis of PilT from the Toxic Cyanobacterium Microcystis aeruginosa PCC 7806. J. Bacteriol., 189, 1689-1697.
Strain(s): 102 
Nakayama, T., Ishii, E., Kanazawa, H. 1987 The study on the isolation and culture of the protoplast from heterothallic Closterium. J. Fac. Sci., Hokkaido Univ., Ser. V (Bot.), 14, 95-114.
Strain(s): 6465 
Nakayama, T., Marin, B., Kranz, H. D., Surek, B., Huss, V. A. R., Inouye, I., Melkonian, M. 1998 The basal position of scaly green flagellates among the green algae (Chlorophyta) is revealed by analyses of nuclear-encoded SSU rRNA sequences. Protist, 149, 367-380.
Strain(s): 251 
DOI: 10.1016/S1434-4610(98)70043-4
Nakayama, T., Nakamura, A., Yokoyama, A., Shiratori, T., Inouye, I., Ishida, K-I. 2015 Taxonomic study of a new eustigmatophycean alga, Vacuoliviride crystalliferum gen. et so. nov. J. Plant Res., 128, 249-257.
Keywords: Eustigmatophyceae; Phylogeny; Taxonomy; Vacuoliviride crystalliferum gen. et so. nov.
Strain(s): 2860 
DOI: 10.1007/s10265-014-0686-3
Nakayama, T., Suda, S., Kawachi, M., Inouye, I. 2007 Phylogeny and ultrastructure of Nephroselmis and Pseudoscourfieldia (Chlorophyta), including the description of Nephroselmis anterostigmatica sp. nov. and a proposal for the Nephroselmidales ord. nov. Phycologia, 46, 680-697.
Keywords: 18S rDNA; hair scales; Nephroselmidales ord nov.; Nephroselmis anterostigmatica sp. nov.; phylogeny; Prasinophyceae; Pseudoscourfieldia marina; taxonomy; ultrastructure
Strain(s): 252 
DOI: 10.2216/04-25.1
Nakayama, T., Watanabe, S., Inouye, I. 1996 Phylogeny of wall-less green flagellates inferred from 18SrDNA sequence data. Phycol. Res., 44, 151-161.
Keywords: 18SrDNA; Chaetopeltidales; Chaetophorales; Chlorophyceae; Dunaliellales, Hafniomonas; molecular phylogeny; Oltmannsiellopsis; Polytomella
Strain(s): 360 
Nakayama, T., Yoshida, M., Noël, M.-H., Kawachi, M., Inouye, I. 2005 Ultrastructure and phylogenetic position of Chrysoculter rhomboideus gen. et sp.nov. (Prymnesiophyceae), a new flagellate haptophyte from Japanese coastal waters. Phycologia, 44, 369-383.
Strain(s): 1874 
DOI: 10.2216/0031-8884(2005)44[369:UAPPOC]2.0.CO;2
Nakazawa, A., Krienitz, L., Nozaki, H. 2001 Taxonomy of the unicellular green algal genus Vitreochlamys (Volvocales), based on comparative morphology of cultured material. Eur. J. Phycol., 36, 113-128.
Keywords: Chlorophyta; comparative morphology; rbcL (large subunit of Rubisco, ribulose-1,5-bisphosphate carboxylase/oxygenase); Sphaerellopsis; taxonomy; ultrastructure; Vitreochlamys; Vitreochlamys pinguis; Volvocales
Strain(s): 877882883 
Nakazawa, A., Nishii, I. 2012 Amidic and acetonic cryoprotectants improve cryopreservation of volvocine green algae. CryoLetters, 33, 201-212.
Keywords: cryopreservation; dimethylformamide; hydroxyacetone; Volvocaceae; Volvox; Chlamydomonas
Strain(s): 4184685455645747287297307311361 
Nakazawa, A., Nozaki, H. 2000 Morphology and asexual reproduction of Vitreochlamys aulata (Volvocales, Chlorophyceae). J. Jpn. Bot., 75, 42-46.
Keywords: asexual reproduction; Chlorophyceae; morphology; Sphaerellopsis; Vitreochlamys aulata
Strain(s): 875 
Nakazawa, A., Nozaki, H. 2004 Phylogenetic analysis of the Tetrasporalean genus Asterococcus (Chlorophyceae) based on 18S ribosomal RNA gene sequences. J. Jpn. Bot., 79, 255-261.
Keywords: 18S rRNA gene; Asterococcus; Palmellopsidaceae; phylogeny; Tetrasporales
Strain(s): 656 
Naohara, T., Ishikawa, H. 1975 Assay of the activity of herbicides using Chlorella. Zassô-Kenkyû, 20, 82-86 (in Japanese with English summary).
Strain(s): 226 
Nara, M., Shiraiwa, Y., Hirokawa, T. 1989 Changes in the carbonic anhydrase activity and the rate of photosynthetic O2 evolution during the cell cycle of Chlorella ellipsoidea C-27. Plant Cell Physiol., 30, 267-275.
Keywords: carbonic anhydrase; cell cycle; Chlorella; CO2 concentration; photosynthesis; synchronous culture
Strain(s): 2170 
Nazifi, E., Wada, N., Asano, T., Nishiuchi, T., Iwamuro, Y., Chinaka, S., Matsugo, S., Sakamoto, T. 2015 Characterization of the chemical diversity of glycosylated mycosporine-like amino acids in the terrestrial cyanobacterium Nostoc commune. J. Photochem. Photobiol. B-Biol., 142, 154-168.
Strain(s): 2538 
DOI: 10.1016/j.jphotobiol.2014.12.008
Nedelcu, A. M., Borza, T., Lee, R. W. 2006 A land-plant specific multigene family in the unicellular Mesostigma argues for its close relationship to Streptophyta. Mol. Biol. Evol., 23, 1011-1015.
Keywords: Mesostigma viride; land plant evolution; Streptophyta; histogenetic meristem; gene family
Strain(s): 296 
DOI: 10.1093/molbev/msj108
Neilan, B. A., Dittmann, E., Rouhiainen, L., Bass, R. A., Schaub, V., Sivonen, K., Börner, T. 1999 Nonribosomal peptide synthesis and toxigenicity of Cyanobacteria. J. Bacteriol., 181, 4089-4097.
Strain(s): 19248199102107 
Neilan, B. A., Hawkins, P. R., Cox, P. T., Goodman, A. E. 1994 Towards a molecular taxonomy for the bloom-forming cyanobacteria. Aust. J. Mar. Freshwater Res., 45, 869-873.
Keywords: 16S rRNA; PCR; Microcystis; Anabaena; DNA sequence
Strain(s): 7889102107111 
Neilan, B. A., Jacobs, D., Goodman, A. E. 1995 Genetic diversity and phylogeny of toxic cyanobacteria determined by DNA polymorphisms within the phycocyanin locus. Appl. Environ. Microbiol., 61, 3875-3883.
Strain(s): 2444788081878998102107111112207298 
Nemjová, K., Neustupa, J., Šťastný, J., Škaloud, P., Veselá, J. 2011 Species concept and morphological differentiation of strains traditionally assigned to Micrasterias truncata. Phycol. Res., 59, 208-220.
Keywords: cryptic diversity; Desmidiales; geometric morphometrics Micrasterias truncata; small subunit rDNA; species concept; trnGUCC intron
Strain(s): 783 
Nichol, B. E., Budd, K., Palmer, G. R., MacArthur, D. 1987 The mechanisms of fluoride toxicity and fluoride resistance in Synechococcus leopoliensis (Cyanophyceae). J. Phycol., 23, 535-541.
Keywords: acidification; bluegreen algae; Cyanophyta; fluoride; phytoplankton; tolerance; toxicity
Strain(s): 3277 
DOI: 10.1111/j.1529-8817.1987.tb04202.x
Nichols, P. D., Volkman, J. K., Hallegraeff, G. M., Blackburn, S. I. 1987 Sterols and fatty acids of the red tide flagellates Heterosigma akashiwo and Chattonella antiqua (Raphidophyceae). Phytochemistry, 26, 2537-2541.
Keywords: Heterosigma akashiwo; Chattonella antiqua; algae; Raphidophyceae; lipids; fatty acids; sterols; chemotaxonomy; red tides
Strain(s): 1 
Nihei, T. 1957 A phosphorylative process, accompanied by photochemical liberation of oxygen, occurring at the stage of nuclear division in Chlorella cell. II. J. Biochem., 44, 389-396.
Strain(s): 2170 
Nihei, T., Sasa, T., Miyachi, S., Suzuki, K., Tamiya, H. 1954 Change of photosynthetic activity of Chlorella cells during the course of their normal life cycle. Arch. Mikrobiol., 21, 156-166.
Strain(s): 2170 
Niiyama, Y. 1996 Morphology and systematics of Anabaena strains in National Science Museum. Jpn. J. Phycol., 44, 1-8 (in Japanese with English summary).
Keywords: akinetes; algal strain; Anabaena; heterocytes; vegetative cells
Strain(s): 8088098108128148198218228258268271639164016411652165316551670167116721673167716801695 
Niiyama, Y., Tuji, A., Tsujimura, S. 2011 Umezakia natans M.WATAN. does not belong to Stigonemataceae but to Nostocaceae. Fottea, 11, 163-169.
Keywords: Anabaena bergii; Aphanizomenon ovalisporum; Nostocaceae; Stigonemataceae; Umezakia natans; 16S rDNA
Strain(s): 2665 
Niki, T., Kunugi, M., Otsuki, A. 2000 DMSP-lyase activity in five marine phytoplankton species: its potential importance in DMS production. Mar. Biol., 136, 759-764.
Strain(s): 353 
Nishibe, Y., Kawabata, Z., Nakano, S. 2002 Grazing on Microcystis aeruginosa by the heterotrophic flagellate Collodictyon triciliatum in a hypertrophic pond. Aquat. Microb. Ecol., 29, 173-179.
Keywords: Microcystis aeruginosa; heterotrophic flagellate; digestion; grazing rate
Strain(s): 298 
Nishibori, N., Niitsu, M., Fujihara, S., Sagara, T., Nishio, S., Imai, I. 2009 Occurrence of the polyamines caldopentamine and homocaldopentamine in axenic cultures of the red tide flagellates Chattonella antiqua and Heterosigma akashiwo (Raphidophyceae). FEMS Microbiol. Lett., 298, 74-78.
Keywords: caldopentamine; homocaldopentamine; Chattonella antiqua; Heterosigma akashiwo
Strain(s): 1 
Nishida, K., Takahara M., Miyagishima S., Kuroiwa H., Matsuzaki M., Kuroiwa, T. 2003 Dynamic recruitment of dynamin for final mitochondrial severance in a red alga. Proc. Nati. Acad. Sci. U. S. A., 100, 2146-2151.
Strain(s): 3377 
PubMed: 12566569
DOI: 10.1073/pnas.0436886100
Nishida, K., Yagisawa, F., Kuroiwa, H., Nagata, T., Kuroiwa, T. 2005 Cell cycle-regulated, microtubule-independent organelle division in Cyanidioschyzon merolae. Mol. Biol. Cell, 16, 2493-2502.
Strain(s): 3377 
DOI: 10.1091/mbc.E05-01-0068
Nishida, K., Yagisawa, F., Kuroiwa, H., Yoshida, Y., Kuroiwa, T. 2007 WD40 protein Mda1 is purified with Dnm1 and forms a dividing ring for mitochondria before Dnm1 in Cyanidioschyzon merolae. Proc. Nati. Acad. Sci. U. S. A., 104, 4736-4741.
Strain(s): 3377 
PubMed: 17360593
DOI: 10.1073/pnas.0609364104
Nishida, T., Tsutsumi, Y., Kemi, M., Haneda, T., Okamura, H. 1999 Decolorization of anthraquinone dyes by white-rot fungi and its related enzymes. J. Jpn. Soc. Wat. Environ., 22, 465-471 (in Japanese with English summary).
Keywords: anthraquinone dye; white-rot fungi; laccase; decolorization; toxicity
Strain(s): 35 
Nishihara, H., Miwa, H., Watanabe, M., Nagashima, M., Yagi, O., Takamura, Y. 1997 Random amplified polymorphic DNA (RAPD) analyses for discriminating genotypes of Microcystis cyanobacteria. Biosci. Biotechnol. Biochem., 61, 1067-1072.
Keywords: RAPD analysis; DNA polymorphism; Microcystis; cyanobacterium; allozyme genotype
Strain(s): 10611067106810761077109010911105113311421164 
Nishiida, K., Misumi, O., Yagisawa, F., Kuroiwa, H., Nagata, T., Kuroiwa, T. 2004 Triple Immunofluorescent Labeling of FtsZ, Dynamin, and EF-Tu revealed a loose association between the inner and outer membrane mitochondrial division machinery in the red alga Cyanidioschyzon merolae. J. Histochem. Cytochem., 52, 1-7.
Keywords: FtsZ; dynamin; elongation factor; Tu; mitochondrial division; Cyanidioschyzon merolae; Alexa; triple immunofluorescence
Strain(s): 3377 
Nishimura, M., Huzisige, H. 1959 Studies on the chlorophyll formation in Euglena gracilis with special reference to the action spectrum of the process. J. Biochem., 46, 225-234.
Strain(s): 49 
Nishimura, T., Pachpande, R. R., Iwamura, T. 1988 A heterotrophic synchlonous culture of Chlorella. Cell Struct. Funct., 13, 207-215.
Strain(s): 2170 
Nishimura, Y., Kamikawa, R., Hashimoto, T., Inagaki, Y. 2012 Separate origins of group I introns in two mitochondrial genes of the katablepharid Leucocryptos marina. PLoS One, 7, e37307 (article ID).
Strain(s): 1333 
DOI: 10.1371/journal.pone.0037307
Nishimura, Y., Kamikawa, R., Hashimoto, T., Inagaki, Y. 2014 An intronic open reading frame was released from one of group II introns in the mitochondrial genome of the haptophyte Chrysochromulina sp. NIES-1333. Mobile Genetic Elements, 4, e29384 (article ID).
Keywords: group II intron; mitochondrial genome; intron encoded protein; lateral intron transfer; Chrysochromulina sp.
Strain(s): 1333 
Noël, M.-H., Kawachi, M., Inouye, I. 2004 Induced dimorphic life cycle of a coccolithophorid, Calyptrosphaera sphaeroidea (Prymnesiophyceae, Haptophyta). J. Phycol., 40, 112-129.
Strain(s): 99712121213 
DOI: 10.1046/j.1529-8817.2004.03053.x
Nogami, R., Nishida, H., Hong, D. D., Wakisaka, M. 2016 Growth promotion of Spirulina by steelmaking slag: application of solubility diagram to understand its mechanism. AMB Express, 6, 96 (article ID).
Keywords: Steelmaking slag; Growth promotion; Spirulina; Solubility diagram; Oxidative stress
Strain(s): 39 
PubMed: 27730571
DOI: 10.1186/s13568-016-0270-4
Noike, T., Souma, Y. 1993 Survey on the influence factors of eutrophication of lakes and the necessity of advanced waste treatment [Koshô no fu-eiyôka no kanôsei to kôdo shori no hitsuyôsei ni kansuru chôsa]. J. Jpn. Soc. Sewage Works [Gesuidô-Kyôkai Shi], 30, 38-44 (in Japanese without English title).
Strain(s): 35 
Nojiri, T., Fujii, T., Sekimoto, H. 1995 Purification and characterization of a novel sex pheromone that induces the release of another sex pheromone during sexual reproduction of the heterothallic Closterium peracerosum-strigosum-littorale complex. Plant Cell Physiol., 36, 79-84.
Keywords: Closterium; conjugation (Closterium); protoplast-release-inducing protein; pheromone
Strain(s): 67 
Not, F., Simon, N., Biegala, I. C., Vaulot, D. 2002 Application of fluorescent in situ hybridization coupled with tyramide signal amplification (FISH-TSA) to assess eukaryotic picoplankton composition. Aquat. Microb. Ecol., 28, 157-166.
Keywords: Fluorescent in situ hybridization; Tyramide signal amplification; Picoplankton; Eukaryotes; Coastal waters; Diversity
Strain(s): 26732682 
Nowack, E. C. M., Podola, B., Melkonian, M. 2005 The 96-well twin-layer system: a novel approach in the cultivation of microalgae. Protist, 156, 239-251.
Keywords: cultivation; culture collections; cell immobilisation; microalgae; microtiter plates; filter plates
Strain(s): 255483485 
DOI: 10.1016/j.protis.2005.04.003
Nozaki, H. 1981 The life history of Japanese Pandorina unicocca (Chlorophyta, Volvocales). J. Jpn. Bot., 56, 65-72, pls. 1-2.
Strain(s): 666667 
Nozaki, H. 1982 Morphology and reproduction of Japanese Volvulina steinii (Chlorophyta, Volvocales). J. Jpn. Bot., 57, 105-113, pls. 3-4.
Strain(s): 545546896897898 
Nozaki, H. 1983 Morphology and taxonomy of two species of Astrephomene (Chlorophyta, Volvocales) in Japan. J. Jpn. Bot., 58, 345-352, pls. 11-13.
Strain(s): 418419564565 
Nozaki, H. 1983 Sexual reproduction in Eudorina elegans (Chlorophyta, Volvocales). Bot. Mag. Tokyo, 96, 103-110.
Keywords: anisogamous conjugation; Chlorophyta; Eudorina elegans; gone colony formation; sexual reproduction; Volvocales
Strain(s): 457 
Nozaki, H. 1984 Volvox aureus Ehrenberg var. aureus. In Photomicrog. Fresh-w. Alg. [Tansui Sôrui Syashinsyû] Vol. 1, Eds. by Yamagishi, T. & Akiyama, M., Uchida Rokakuho, Tokyo, p. 97 (in Japanese & English).
Strain(s): 542 
Nozaki, H. 1984 Newly found facets in the asexual and sexual reproduction of Gonium pectorale (Chlorophyta, Volvocales). Jpn. J. Phycol., 32, 130-133.
Keywords: asexual reproduction; Chlorophyta; flagellar emission; Gonium pectorale; isogamous conjugation; mating papilla; sexual reproduction; Volvocales
Strain(s): 468469 
Nozaki, H. 1986 Notes on microalgae in Japan (10). Eudorina illinoisensis (Chlorophyta, Volvocales). Jpn. J. Phycol., 34, 144 (in Japanese with English title).
Strain(s): 459 
Nozaki, H. 1986 Notes on microalgae in Japan (9). Basichlamys sacculifera (Chlorophyta, Volvocales). Jpn. J. Phycol., 34, 143 (in Japanese with English title).
Strain(s): 566 
Nozaki, H. 1986 Zygote germination in Eudorina elegans var. synoica (Chlorophyta, Volvocales). J. Jpn. Bot., 61, 316-320, pl. 8.
Strain(s): 458 
Nozaki, H. 1988 Colonial Volvocales (Chlorophyta) from Kathmandu, Nepal. In Cryptogams of the Himalayas. Vol. 1. The Kathmandu Valley, Eds. by Watanabe, M. & Malla, S. B., Department of Botany, National Science Museum, Tsukuba, p. 39-46.
Strain(s): 568574575 
Nozaki, H. 1988 Morphology, sexual reproduction and taxonomy of Volvox carteri f. kawasakiensis f. nov. (Chlorophyta) from Japan. Phycologia, 27, 209-220.
Strain(s): 580581 
Nozaki, H. 1989 Morphological variation and reproduction in Gonium viridistellatum (Volvocales, Chlorophyta). Phycologia, 28, 77-88.
Strain(s): 288289290655 
Nozaki, H. 1990 Colonial Volvocales (Chlorophyta) from Central and East Nepal. In Cryptogams of the Himalayas. Vol. 2. Central and Eastern Nepal, Eds. by Watanabe, M. & Malla, S. B., Department of Botany, National Science Museum, Tsukuba, p. 41-47.
Strain(s): 584585 
Nozaki, H. 1990 Ultrastructure of the extra-cellular matrix of Gonium (Volvocales, Chlorophyta). Phycologia, 29, 1-8.
Strain(s): 468651885 
Nozaki, H. 1993 Asexual and sexual reproduction in Gonium quadratum (Chlorophyta) with a discussion of phylogenetic relationships within the Goniaceae. J. Phycol., 29, 369-376.
Keywords: asexual reproduction; Chlorophyta; Goniaceae; Gonium quadratum; mating papilla; phylogeny; sexual reproduction; zygote germination
Strain(s): 651652653 
Nozaki, H. 1993 Morphology, reproduction and taxonomy of Characiochloris sasae sp. nov. (Chlorophyta) from Japan. Phycologia, 32, 129-135.
Strain(s): 567637638 
Nozaki, H. 1994 Aplanogamous sexual reproduction in Carteria eugametos (Volvocales, Chlorophyta). Eur. J. Phycol., 29, 135-139.
Keywords: aplanogamy; Carteria eugametos; Chlorophyta; morphology; sexual reproduction; Volvocales
Strain(s): 631632633 
Nozaki, H. 2003 Origin and evolution of the genera Pleodorina and Volvox (Volvocales). Biologia, Bratislava, 58, 425-431.
Keywords: colonial Volvocales; evolution; molecular phylogeny; Pleodorina; sexual reproduction; Volvox
Strain(s): 544 
Nozaki, H. 2008 Zygote germination in Pleodorina starrii (Volvocaceae, Chlorophyta). Biologia, 63, 774-776.
Keywords: Chlorophyta; Volvocales; Volvocaceae; Pleodorina starrii; morphology; zygote germination
Strain(s): 185218531854 
Nozaki, H., Coleman, A. W. 2011 A new species of Volvox sect. Merrillosphaera (Volvocaceae, Chlorophyceae) from Texas. J. Phycol., 47, 673-679.
Keywords: molecular phylogeny; morphology; taxonomy; Volvox ovalis sp. nov.; Volvox sect. Merrillosphaera
Strain(s): 2569 
Nozaki, H., Aizawa, K., Watanabe, M. M. 1994 A taxomonic study of four species of Cartera (Volvocales, Chlorophyta) with cruciate anterior papillae, based on cultured material. Phycologia, 33, 239-247.
Strain(s): 422423424630632633634635636 
Nozaki, H., Aizawa, K., Watanabe, M. M. 1996 Re-examination of two NIES strains labeled Chlorogonium metamorphum (Volvocales, Chlorophyta) from Japan. Nova Hedwigia Beiheft, 112, 483-490.
Keywords: Chlorogonium; Chlorophyta; morphology; neotype strain; species identification; Volvocales
Strain(s): 123 
Nozaki, H., Hara, Y., Kasaki, H. 1987 Light and electron microscopy of pyrenoids and species delimitation in Volvulina (Chlorophyta, Volvocaceae). J. Phycol., 23, 359-364.
Keywords: Chlorophyta; culture age; pyrenoid; pyrenoid development; taxonomy; ultrastructure; Volvocaceae; Volvulina pringsheimii; Volvulina steinii
Strain(s): 545896897898 
Nozaki, H., Ito, M. 1994 Phylogenetic relationships within the colonial Volvocales (Chlorophyta) inferred from cladistic analysis based on morphological data. J. Phycol., 30, 353-365.
Keywords: Chlorophyta; cladistic analysis; Goniaceae; morphological data; phylogeny; sexual reproduction; Tetrabaena; Tetrabaenaceae fam. nov.; Tetrabaena socialis comb. nov.; Volvocaceae
Strain(s): 565 
Nozaki, H., Ito, M., Sano, R., Uchida, H., Watanabe, M. M., Kuroiwa, T. 1995 Phylogenetic relationships within the colonial Volvocales (Chlorophyta) inferred from rbcL gene sequence data. J. Phycol., 31, 970-979.
Keywords: Chlorophyta; Goniaceae; large subunit of ribulose-1,5-bisphosphate carboxylase / oxygenase (rbcL) gene; molecular phylogeny; Tetrabaenaceae; Volvocaceae
Strain(s): 418564566572574577653731734895 
Nozaki, H., Ito, M., Sano, R., Uchida, H., Watanabe, M. M., Takahashi, H., Kuroiwa, T. 1997 Phylogenetic analysis of Yamagishiella and Platydorina (Volvocaceae, Chlorophyta) based on rbcL gene sequences. J. Phycol., 33, 272-278.
Keywords: Chlorophyta; Goniaceae; large subunit of ribulose-1,5-bisphosphate carboxylase / oxygenase (rbcL) gene; molecular phylogeny; Platydorina; Volvocaceae; Yamagishiella
Strain(s): 666724726728729730736884 
Nozaki, H., Ito, M., Uchida, H., Watanabe, M. M., Kuroiwa, T. 1997 Phylogenetic analysis of Eudorina species (Volvocaceae, Chlorophyta) based on rbcL gene sequences. J. Phycol., 33, 859-863.
Keywords: Chlorophyta; Eudorina; large subunit of ribulose-1,5-bisphosphate carboxylase / oxygenase (rbcL) gene; molecular phylogeny; species delimitation; taxonomic species; Volvocaceae
Strain(s): 458568718719720723 
Nozaki, H., Ito, M., Watanabe, M. M., Kuroiwa, T. 1996 Ultrastructure of the vegetative colonies and systematic position of Basichlamys (Volvocales, Chlorophyta). Eur. J. Phycol., 31, 67- 72.
Keywords: Basichlamys sacculifera; Chlorophyta; cladistic analysis; phylogeny; Tetrabaenaceae; ultrastructure; Volvocales
Strain(s): 566 
Nozaki, H., Ito, M., Watanabe, M. M., Takano, H., Kuroiwa, T. 1997 Phylogenetic analysis of morphological species of Carteria (Volvocales, Chlorophyta) based on rbcL gene sequences. J. Phycol., 33, 864-867.
Keywords: Carteria; large subunit of ribulose-1,5-bisphosphate carboxylase / oxygenase (rbcL) gene; microalgae; molecular phylogeny; monophyly; natural systematics; species concepts; species taxonomy; Volvocales
Strain(s): 422423424432630631632633634635636 
Nozaki, H., Kasaki, H. 1979 The sexual process of Japanese Pandorina morum Bory (Chlorophyta). J. Jpn. Bot., 54, 363-370, pl. 9.
Strain(s): 890 
Nozaki, H., Katagiri, M., Nakagawa, M., Aizawa, K., Watanabe, M. M. 1995 Taxonomic re-examination of the two strains labeled Chlorella in the Microbial Culture Collection at the National Institute for Environmental Studies (NIES-Collection). Microbiol. Cult. Coll., 11, 11-18.
Keywords: Chlorella; Graesiella emersonii comb. nov.; green algae; morphology; taxonomy
Strain(s): 226227686687688689690 
Nozaki, H., Krienitz, L. 2001 Morphology and phylogeny of Eudorina minodii (Chodat) Nozaki et Krienitz, comb. nov. (Volvocales, Chlorophyta) from Germany. Eur. J. Phycol., 36, 23-28.
Keywords: Eudorina minodii comb. nov.; molecular phylogeny; morphology; Pandorina minodii; taxonomy; Volvocales
Strain(s): 856 
Nozaki, H., Kuroiwa, H., Kuroiwa, T. 1994 Light and electron microscopic characterization of two types of pyrenoids in Gonium (Goniaceae, Chlorophyta). J. Phycol., 30, 279-290.
Keywords: Chlorophyta; electron microscopy; Goniaceae; Gonium pectorale; Gonium quadratum; immunogold electron microscopy; pyrenoid; ribulose-1,5-bisphosphate carboxylase / oxygenase (RuBisCO) taxonomy; thylakoid lamellae
Strain(s): 468653 
Nozaki, H., Kuroiwa, H., Mita, T., Kuroiwa, T. 1989 Pleodorina japonica sp. nov. (Volvocales, Chlorophyta) with bacteria-like endosymbionts. Phycologia, 28, 252-267.
Strain(s): 577 
Nozaki, H., Kuroiwa, T. 1991 Pandorina colemaniae sp. nov. (Volvocaceae, Chlorophyta) from Japan. Phycologia, 30, 449-457.
Strain(s): 572573 
Nozaki, H., Kuroiwa, T. 1991 Morphology and sexual reproduction of Gonium multicoccum (Volvocales, Chlorophyta) from Nepal. Phycologia, 30, 381-393.
Strain(s): 885 
Nozaki, H., Kuroiwa, T. 1992 Ultrastructure of the extracellular matrix and taxonomy of Eudorina, Pleodorina and Yamagishiella gen. nov. (Volvocaceae, Chlorophyta). Phycologia, 31, 529-541.
Strain(s): 459666 
Nozaki, H., Maruyama, S., Matsuzaki, M., Nakada, T., Kato, S., Misawa, K. 2009 Phylogenetic positions of Glaucophyta, green plants (Archaeplastida) and Haptophyta (Chromalveolata) as deduced from slowly evolving nuclear genes. Mol. Phylogenet. Evol., 53, 872-880.
Keywords: Archaeplastida; Chromalveolata; eukaryote evolution; Haptophyta; Glaucophyta; green plants; long branch attraction; nuclear genes; phylogeny; primary photosynthetic eukaryotes; short branch; "Super" Plant Kingdom
Strain(s): 547 
Nozaki, H., Matsuzaki, M., Misumi, O., Kuroiwa, H., Hasegawa, M., Higashiyama, T., Shin-i, T., Kohara, Y., Ogasawara, N., Kuroiwa, T. 2004 Cyanobarterial genes transmitted to the nucleus before divergence of red algae in the Chromista. J. Mol. Evol., 59, 103-113.
Keywords: Chromista; cyanobacterial nuclear genes; phylogeny; plastids; primary endosymbiosis; secondary endosymbiosis
Strain(s): 13323377 
Nozaki, H., Matsuzaki, M., Misumi, O., Kuroiwa, H., Higashiyama, T., Kuroiwa, T. 2005 Phylogenetic implications of the CAD complex from the primitive red alga Cyanidioschyzon merolae (Cyanidiales, Rhodophyta). J. Phycol., 41, 652-657.
Keywords: CAD complex; evolution; phylogeny; red algae; pyrimidine biosynthetic cluster
Strain(s): 13323377 
Nozaki, H., Matsuzaki, M., Takahara, M., Misumi, O., Kuroiwa, H., Hasegawa, M., Shin-i, T., Kohara, Y., Ogasawara, N., Kuroiwa, T. 2003 The phylogenetic position of red algae revealed by multiple nuclear genes from mitochondria-containing eukaryotes and an alternative hypothesis on the origin of plastids. J. Mol. Evol., 56, 485-497.
Keywords: eukaryotes; evolution; nuclear genes; outgroup; phylogeny; plantae; plastid; protein-coding genes; red algae
Strain(s): 13323377 
Nozaki, H., Matsuzaki, R., Yamamoto, K., Kawachi, M., Takahashi, F. 2015 Delineating a new heterothallic species of Volvox (Volvocaceae, Chlorophyceae) using new strains of “Volvox africanus”. PLoS One, 10, e0142632 (article ID).
Strain(s): 378037813782378437853786 
DOI: 10.1371/journal.pone.0142632
Nozaki, H., Misawa, K., Kajita, T., Kato, M., Nohara, S., Watanabe, M. M. 2000 Origin and evolution of the colonial Volvocales (Chlorophyceae) as inferred from multiple, chloroplast gene sequences. Mol. Phylogenet. Evol., 17, 256-268.
Strain(s): 418474545564566572574577653666720724727728730731734736851872882884886888889890893895896898 
Nozaki, H., Misumi, O., Kuroiwa, T. 2003 Phylogeny of the quadriflagellate Volvocales (Chlorophyceae) based on chloroplast multigene sequences. Mol. Phylogenet. Evol., 29, 58-66.
Strain(s): 656 
Nozaki, H., Mori, T., Misumi, O., Matsunaga, S., Kuroiwa, T. 2006 Males evolved from the dominant isogametic mating type. Curr. Biol., 16, R1018-R1020.
Strain(s): 161116121613161416152214 
PubMed: 17174904
DOI: 10.1016/j.cub.2006.11.019
Nozaki, H., Nakada, T., Watanabe, S. 2010 Evolutionary origin of Gloeomonas (Volvocales, Chlorophyceae), based on ultrastructure of chloroplasts and molecular phylogeny. J. Phycol., 46, 195-201.
Keywords: Chloromonadinia; Chloromonas; evolution; Gloeomonas; molecular phylogeny; pyrenoid; ultrastructure; Volvocales
Strain(s): 447464 
DOI: 10.1111/j.1529-8817.2009.00773.x
Nozaki, H., Ohta, N., Morita, E., Watanabe, M. M. 1998 Toward a natural system of species in Chlorogonium (Volvocales, Chlorophyta): a combined analysis of morphological and rbcL gene sequence data. J. Phycol., 34, 1024-1037.
Keywords: Chlorogonium; Chlorogonium kasakii sp. nov.; Chlorophyta; molecular phylogeny; monophyletic species; morphology; natural systematics; rbcL gene; species taxonomy; Volvocales
Strain(s): 123692742743744745746747748749750752753754755756757758759760761 
Nozaki, H., Ohta, N., Takano, H., Watanabe, M. M. 1999 Reexamination of phylogenetic relationships within the colonial Volvocales (Chlorophyta): an analysis of atpB and rbcL gene sequences. J. Phycol., 35, 104-112.
Keywords: atpB gene; Chlorophyta; Gonium; molecular phylogeny; rbcL gene; Volvocaceae; volvocine series; Volvox
Strain(s): 418564566568572574577653666720724727728730731734736851852858882884895 
Nozaki, H., Onishi, K., Morita, E. 2002 Differences in pyrenoid morphology are correlated with differences in the rbcL genes of members of the Chloromonas lineage (Volvocales, Chlorophyceae). J. Mol. Evol., 55, 414-430.
Keywords: ATP synthase β-subunit (atpB) gene; Chloromonas; gene evolution; large subunit of Rubisco (rbcL) gene; morphological evolution; P700 chlorophyll a-apoprotein A2 (psaB) gene; pyrenoid; Volvocales
Strain(s): 123144213418432447474522564566567574653851858875882883968 
Nozaki, H., Takahara, M., Nakazawa, A., Kita, Y., Yamada, T., Takano, H., Kawano, S., Kato, M. 2002 Evolution of rbcL group IA introns and intron open reading frames within the colonial Volvocales (Chlorophyceae). Mol. Phylogenet. Evol., 23, 326-338.
Strain(s): 289418875883891892 
Nozaki, H., Takano, H., Misumi, O., Terasawa, K., Matsuzaki, M., Maruyama, S., Nishida, K., Yagisawa, F., Yoshida, Y., Fujiwara, T., Takio, S., Tamura, K., Chung, S. J., Nakamura, S., Kuroiwa, H., Tanaka, K., Sato, N., Kuroiwa, T. 2007 A 100%-complete sequence reveals unusually simple genomic features in the hot-spring red alga Cyanidioschyzon merolae. BMC Biol., 5, 28 (article ID).
Strain(s): 13323377 
DOI: 10.1186/1741-7007-5-28
Nozaki, H., Ueki, N., Isaka, N., Saigo, T., Yamamoto, K., Matsuzaki, R., Takahashi, F., Wakabayashi, K-I., Kawachi, M. 2016 A new morphological type of Volvox from japanese large lakes and recent divergence of this type and V. ferrisii in two different freshwater habitats. PLoS One, 11, e0167148 (article ID).
Strain(s): 2736273739873988 
DOI: 10.1371/journal.pone.0167148
Nozaki, H., Ueki, N., Misumi, O., Yamamoto, K., Yamashita, S., Herron, M. D., Rosenzweig, F. 2015 Morphology and reproduction of Volvox capensis (Volvocales, Chlorophyceae) from Montana, USA. Phycologia, 54, 316-320.
Keywords: Monoecious species; Morphology; Pplyspermy; Reproduction; Volvox capensis; Volvox sect. Volvox
Strain(s): 38743875 
DOI: 10.2216/15-14.1
Nozaki, H., Yamada, K. T., Takahashi, F., Matsuzaki, R., Nakada, T. 2014 New "missing link" genus of the colonial volvocine green algae gives insights into the evolution of oogamy. BMC Evol. Biol., 14, 37 (article ID).
Strain(s): 338233833384338533863387 
DOI: 10.1186/1471-2148-14-37
Nozue, S., Mukuno, A., Tsuda, Y., Shiina, T., Terazima, M., Kumazaki, S. 2016 Characterization of thylakoid membrane in a heterocystous cyanobacterium and green alga with dual-detector fluorescence lifetime imaging microscopy with a systematic change of incident laser power. Biochim. Biophys. Acta-Bioenerg., 1857, 46–59.
Keywords: Photosystem II; Photosystem I; Chlorophyll fluorescence; Fluorescence lifetime imaging microscopy; Heterocystous cyanobacteria; Green algae
Strain(s): 2095 
DOI: 10.1016/j.bbabio.2015.10.003
Nybom, S. M. K., Salminen, S. J., Meriluoto, J. A. O. 2008 Specific strains of probiotic bacteria are efficient in removal of several different cyanobacterial toxins from solution. Toxicon, 52, 214-220.
Keywords: Cyanotoxin; Microcystin; Cylindrospermopsin; Probiotic bacteria; Bifidobacterium; Lactobacillus; Removal
Strain(s): 107 
Obata, T., Araie, H., Shiraiwa, Y. 2004 Bioconcentration mechanism of selenium by a coccolithophorid, Emiliania huxleyi. Plant Cell Physiol., 45, 1434-1441.
Keywords: coccolithophorid; Emiliania huxleyi; selenite uptake; selenium accumulation
Strain(s): 837 
PubMed: 15564527
DOI: 10.1093/pcp/pch164
Obata, T., Sera, K., Futatsugawa, S., Shiraiwa, Y. 2004 Multi-element analysis of marine microalgae using particle-induced X-ray emission. Mar. Biotechnol., 6, 66-70.
Keywords: coccolithophorid; element concentration; elemental composition; Emiliania huxleyi; multi-element analysis; particle-induced X-ray emmision
Strain(s): 837 
Obata, T., Shiraiwa, Y. 2005 A novel eukaryotic selenoprotein in the haptophyte alga Emiliania huxleyi. J. Biol. Chem., 280, 18462-18468.
Strain(s): 837 
DOI: 10.1074/jbc.M501517200
Ochiai, T., Fukuda, T., Nakata, K., Murakami, T., Tryk, D. A., Koide, Y., Fujishima, A. 2010 Photocalalytic inactivation and removal of algae with TiO2-coated materials. J. Appl. Electrochem., 40, 1737–1742.
Keywords: TiO2 photocatalyst; photoelectrochemical deposition; photocatalytic inactivation; algae
Strain(s): 1668 
DOI: 10.1007/s10800-010-0133-7
Oda, T., Sato, Y., Kim, D., Muramatsu, T., Matsuyama, Y., Honjo, T. 2001 Hemolytic activity of Heterocapsa circularisquama (Dinophyceae) and its possible involvement in shellfish toxicity. J. Phycol., 37, 509-516.
Keywords: Heterocapsa circularisquama; hemolysis; shellfish toxicity; harmful phytoplankton
Strain(s): 15 
Ogasawara, N., Miyachi, S. 1969 Effect of wavelength on 14CO2-fixation in Chlorella cells. In Progress in Photosynthesis Research, Vol. 3., Ed. by Metzner, H., Verlag C. Lichtenstein, München, p. 1653-1661.
Strain(s): 2170 
Ogasawara, N., Miyachi, S. 1970 Effects of disalicylidenepropandiamine and near far-red light on 14CO2-fixation in Chlorella cells. Plant Cell Physiol., 11, 411-416.
Strain(s): 2170 
DOI: 10.1093/oxfordjournals.pcp.a074523
Ogasawara, N., Miyachi, S. 1970 Regulation of CO2-fixation in Chlorella by light of varied wavelengths and intensities. Plant Cell Physiol., 11, 1-14.
Strain(s): 2170 
Ogasawara, N., Miyachi, S. 1971 Effects of dark preincubation and chloramphenicol on blue light-induced CO2 incorporation in Chlorella cells. Plant Cell Physiol., 12, 675-682.
Strain(s): 2170 
Ogawa, S., Hirota, K. 2000 Disintegration of chloroplasts during zygote maturation in Closterium ehrenbergii (Zygnematales, Chlorophyta). Int. J. Plant Sci., 161, 609-614.
Keywords: chloroplast; Closterium; conjugation; disintegration of chloroplast; Zygnematales; zygote maturation
Strain(s): 228229 
Ogawa, S., Iokawa, Y., Oba, T., Watanabe, T. 1999 Application of low-vacuum scanning electron microscope (LV SEM) to the classes for plankton observation. Bull. Joetsu Univ. Educ., 19, 99-109 (in Japanese with English summary).
Keywords: freeze-drying method; low-vacuum scanning electron microscope (LV SEM); plankton; scanning electron microscope (SEM)
Strain(s): 229 
Ogawa, S., Shatari, Y. 2004 Spot-like area of F-actin associated with the migrating nucleus in post-mitotic cells of Closterium moniliferum var. submoniliferum (Zygnematales, Chlorophyta). Bull. Joetsu univ. Educ., 23, 705-712.
Keywords: Cell division; Closterium; F-actin; microtubule; Nuclear migration; Zygnematales
Strain(s): 182 
Ogawa, Y., Kimura, S., Saito, Y., Wada, M. 2012 Infrared study on deuteration of highly-crystalline chitin. Carbohydr. Polym., 90, 650-657.
Keywords: α-Chitin; β-Chitin; Deuteration; FT-IR spectroscopy; X-ray diffraction
Strain(s): 1396 
Ogawa, Y., Kimura, S., Wada, M., Kuga, S. 2010 Crystal analysis and high-resolution imaging of microfibrillar a-chitin from Phaeocystis. J. Struct. Biol., 171, 111-116.
Keywords: a-chitin microfibril; Phaeocystis; FT-IR spectroscopy; X-ray diffraction; high-resolution electron microscopy; lattice imaging
Strain(s): 1396 
Oh, S. J., Kim, D.-I., Sajima, T., Shimasaki, Y., Matsuyama, Y., Oshima, Y., Honjo, T., Yang, H.-S. 2008 Effects of irradiance of various wavelengths from light-emitting diodes on the growth of the harmful dinoflagellate Heterocapsa circularisquama and the diatom Skeletonema costatum. Fish. Sci., 74, 137-145.
Keywords: Heterocapsa circularisquama; irradiance; light wavelengths; light-emitting diode; Skeletonema costatum
Strain(s): 324 
Oh-hama, T., Miyachi, S. 1959 Effect of illumination and oxygen supply upon the levels of pyridine nucleotides in Chlorella cells. Biochim. Biophys. Acta, 34, 202-210.
Strain(s): 2170 
Oh-hama, T., Miyachi, S. 1960 Changes in levels of pyridine nucleotides in Chlorella cells during the course of photosynthesis. Plant Cell Physiol., 1, 155-162.
Strain(s): 2170 
Oh-hama, T., Moriyama, Y., Tamiya, H. 1965 Changes in contents and oxidoreductive states of pyridine nucleotides in Chlorella cells during their life cycle. In Beitr. zur Biochem. und Physiol. von Naturstoffen (Festschr. f. K. Mothes), Gustav Fischer, Jena, p. 341-345.
Strain(s): 2170 
Oh-hama, T., Senger, H. 1978 Spectral effectiveness in chlorophyll and 5-amino levulinic acid formation during regreening of glucose-bleached cells of Chlorella protothecoides. Plant Cell Physiol., 19, 1295-1299.
Keywords: ALA synthesis; blue light effect; Chlorella protothecoides; chlorophyll formation
Strain(s): 227 
Oh-hama, T., Seto, H., Miyachi, S. 1985 13C-Nuclear magnetic resonance studies of the biosynthesis of 5-aminolevulinic acid destined for chlorophyll formation in dark-grown Scenedesmus obliquus. Plant Sci., 42, 153-158.
Keywords: biosynthesis of 5-aminolevulinic acid; chlorophyll biosynthesis; 13C-nuclear magnetic resonance; Scenedesmus obliquus
Strain(s): 2280 
Oh-hama, T., Seto, H., Otake, N., Miyachi, S. 1982 13C-NMR evidence for the pathway of chlorophyll biosynthesis in algae. Biochem. Biophys. Res. Commun., 105, 647-652.
Strain(s): 2280 
Oh-hama, T., Seto, H., Otake, N., Miyachi, S. 1983 13C-NMR spectra of chlorophylls a and b in green algae biosynthetically enriched with [1-13C] glutamate. FEBS Lett., 153, 404-408.
Keywords: 5-aminolevulinic acid; chlorophyll a; chlorophyll b; 13C-NMR; [1-13C]glutamic acid; Scenedesmus obliquus
Strain(s): 2280 
Oh-hama, T., Siebelt, F., Furihata, K., Seto, H., Miyachi, S., Ohmori, K. 1986 31P-NMR studies on inorganic polyphosphates in microalgae. J. Phycol., 22, 485-490.
Keywords: Anabaena cylindrica; Chlorella vulgaris 11h; inorganic polyphosphate; 13P nuclear magnetic resonance of algae
Strain(s): 2280 
Ohko, Y., Nagao, Y., Okano, K., Sugiura, N., Fukuda, A., Yang, Y., Negishi, N., Takeuchi, M., Hanada, S. 2009 Prevention of Phormidium tenue biofilm formation by TiO2 photocatalysis. Microbes. Environ., 24, 241-245.
Keywords: Phormidium tenue; cyanobacteria; TiO2 photocatalyst; anti-biofilm; UV light
Strain(s): 512 
Ohmori, K., Hirose, M., Ohmori, M. 1993 An increase in the intracellular concentration of cAMP triggers formation of an algal mat by the cyanobacterium Spirulina platensis. Plant Cell Physiol., 34, 169-171.
Keywords: cyanobacteria (blue-green algae); cyclic AMP; motility; Spirulina platensis
Strain(s): 39 
Ohmori, K., Ohmori, M. 1988 Ammonium assimilation in the blue-green alga Spirulina platensis. Jpn. J. Phycol., 36, 12-16.
Strain(s): 39 
Ohmori, M. 1984 Effects of preillumination on dark nitrogen fixation and respiration by Anabaena cylindrica. Plant Cell Physiol., 25, 125-130.
Keywords: acetylene reduction; Anabaena; dark nitrogen fixation; respiration
Strain(s): 19 
Ohmori, M. 1989 cAMP in Anabaena cylindrica: Rapid changes in cellular levels in response to changes in extracellular environments. Plant Cell Physiol., 30, 911-914.
Keywords: Anabaena cylindrica; cAMP; cyanobacteria; membrane potential
Strain(s): 19 
Ohmori, M., Hasunuma, K., Furukawa, K. 1988 GTP-binding proteins in a cyanobacterium Anabaena cylindrica. Biochem. Biophys. Res. Commun., 151, 215-221.
Strain(s): 19 
Ohmori, M., Hattori, A. 1971 Heterocyst and nitrogen fixation in Anabaena cylindrica. In Proceedings of the Seventh International Seaweed Symposium, University of Tokyo Press, Tokyo, p. 598-601.
Strain(s): 19 
Ohmori, M., Hattori, A. 1971 Nitrogen fixation and heterocysts in the blue-green alga Anabaena cylindrica. Plant Cell Physiol., 12, 961-967.
Strain(s): 19 
Ohmori, M., Hattori, A. 1972 Effect of nitrate on nitrogen-fixation by the blue-green alga Anabaena cylindrica. Plant Cell Physiol., 13, 589-599.
Strain(s): 19 
Ohmori, M., Hattori, A. 1974 Effect of ammonia on nitrogen fixation by the blue-green alga Anabaena cylindrica. Plant Cell Physiol., 15, 131-142.
Strain(s): 19 
Ohmori, M., Hattori, A. 1978 Transfer change in the ATP pool of Anabaena cylindrica associated with ammonia assimilation. Arch. Mikrobiol., 117, 17-20.
Strain(s): 19 
Ohmori, M., Kanda, J. 1987 H+ and K+ efflux associated with NH4+ uptake in Anabaena cylindrica cells in the dark. J. Gen. Appl. Microbiol., 33, 311-319.
Strain(s): 19 
Ohmori, M., Miyachi, S., Okabe, K., Miyachi, S. 1984 Effects of ammonia on respiration, adenylate levels, amino acid synthesis and CO2 fixation in cells of Chlorella vulgaris 11h in darkness. Plant Cell Physiol., 25, 749-756.
Keywords: adenylate level; amino acid; ammonia effect; Chlorella vulgaris; dark CO2 fixation; respiration
Strain(s): 2160 
Ohmori, M., Oh-hama, T., Furihata, K., Miyachi, S. 1986 Effect of ammonia on cellular pH of Anabaena cylindrica determined with 31P NMR spectroscopy. Plant Cell Physiol., 27, 563-566.
Keywords: ammonia effect; Anabaena cylindrica; 31P NMR spectroscopy; cellular pH
Strain(s): 19 
Ohmori, M., Ohmori, K. 1982 Application of glass fiber paper chromatography to measurement of 15N content of amino acids. Radioisotopes, 31, 651-653.
Keywords: glass fiber paper chromatography; nitrogen-15-amino acid
Strain(s): 19 
Ohmori, M., Ohmori, K. 1985 Differential effects of methionine sulfoximine on light and dark uptake of nitrate by Anabaena cylindrica. Plant Cell Physiol., 26, 957-960.
Keywords: Anabaena cylindrica; methionine sulfoximine; nitrate uptake; nitrite uptake
Strain(s): 19 
Ohmori, M., Ohmori, K., Hasunuma, K. 1988 Rapid change in cyclic 3',5'-AMP concentration triggered by a light-off or light-on signal in Anabaena cylindrica. Arch. Mikrobiol., 150, 203-204.
Strain(s): 19 
Ohmori, M., Ohmori, K., Strotman, H. 1977 Inhibition of nitrate uptake by ammonia in a blue-green alga, Anabaena cylindrica. Arch. Mikrobiol., 114, 225-229.
Strain(s): 19 
Ohmori, M., Saito, T., Ohmori, K. 1985 Occurrence of glutamine-2-oxoacid transaminase in a blue-green alga, Anabaena cylindrica. J. Gen. Appl. Microbiol., 31, 171-176.
Strain(s): 192170 
Ohmori, M., Satoh, Y., Urata, K. 1989 Light-induced accumulation of lactate and succinate in Anabaena cylindrica (Cyanophyta). Arch. Mikrobiol., 151, 101-104.
Strain(s): 19 
Ohmura, Y., Kawachi, M., Kasai, F., Watanabe, M. M., Takeshita, S. 2006 Genetic combinations of symbionts in a vegetatively reproducing lichen, Parmotrema tinctorum, based on its rDNA sequences. Bryologist, 109, 43-59.
Keywords: diversity; ITS rDNA; mycobiont; Parmotrema tinctorum; photobiont; selectivety; Trebouxia corticola; vegetative reproduction.
Strain(s): 1446144714481449145014511452145314541455 
DOI: 10.1639/0007-2745(2006)109[0043:GCOSIA]2.0.CO;2
Ohnuma, M., Kuroiwa, T., Tanaka, K. 2011 Optimization of cryopreservation conditions for the unicellular red alga Cyanidioschyzon merolae. J. Gen. Appl. Micobiol.,, 57, 137-143.
Keywords: cryoinjury; cryopreservation; Cyanidioschyzon merolae; unicellular red alga
Strain(s): 13323377 
Ohnuma, M., Misumi, O., Fujiwara, T., Watanabe, S., Tanaka, K., Kuroiwa, T. 2009 Transient gene suppression in a red alga, Cyanidioschyzon merolae 10D. Protoplasma, 236, 107-112.
Keywords: Antisense suppression; Cyanidioschyzon merolae; Catalase; GFP; Transformation
Strain(s): 3377 
Ohnuma, M., Yokoyama, T., Inouye, T., Sekine, Y., Tanaka, K. 2008 Polyethylene glycol (PEG)-mediated transient gene expression in a Red Alga, Cyanidioschyzon merolae 10D. Plant Cell Physiol., 49, 117-120.
Keywords: Cyanidioschyzon merolae; Hemagglutinin; Polyethylene glycol; Transformation; Transient expression system
Strain(s): 3377 
Ohta, N., Matsuzaki, M., Misumi, O., Miyagishima, S., Nozaki, H., Tanaka, K., Shin-I, T., Kohara, Y., Kuroiwa, T. 2003 Complete sequence and analysis of the plastid genome of the unicellular red alga Cyanidioschyzon merolae. DNA Res., 10, 67-77.
Keywords: Cyanidioschyzon merolae; red algae; plastid; genome sequencing
Strain(s): 13323377 
PubMed: 12755171
DOI: 10.1093/dnares/10.2.67
Ohta, N., Nagashima, H., Kawano, S., Kuroiwa, T. 1992 Isolation of the chloroplast DNA and the sequence of the trnK gene from Cyanidium caldarium strain RK-1. Plant Cell Physiol., 33, 657-661.
Keywords: chloroplast DNA; Cyanidium caldarium; transfer RNA-lysine
Strain(s): 2137 
Ohta, N., Satao, N., Ueda, K., Kuroiwa, T. 1997 Analysis of a plastid gene cluster reveals a close relationship between Cyanidioschyzon and Cyanidium. J. Plant Res., 110, 235-245.
Keywords: Cyanidioschyzon merolae; Cyanidium caldarium; Plastid genome; Rhodophyta
Strain(s): 3377 
Ohta, N., Sato, N., Kuroiwa, T. 1998 Structure and organization of the mitochondrial genome of the unicellular red alga Cyanidioschyzon merolae deduced from the complete nucleotide sequence. Nucleic Acids Res., 26, 5190-5198.
Strain(s): 13323377 
DOI: 10.1093/nar/26.22.5190
Ohta, N., Sato, N., Kuroiwa, T. 1999 The organellar genomes of Cyanidioschyzon merolae. In Enigmatic Microorganisms and Life in Extreme Environments, Ed. by Seckbach,J., Kluwer Academic Publishers, 139-149.
Strain(s): 3377 
Ohta, S., Chang, T., Aozasa, O., Kondo, M., Miyata, H. 1992 Sustained production of arachidonic and eicosapentaenoic acids by the red alga Porphyridium purpureum cultured in a light/dark cycle. J. Ferment. Bioengin., 74, 398-402.
Strain(s): 214021682256 
Ohta, S., Miyamoto, K., Miura, Y. 1987 Hydrogen evolution as a consumption mode of reducing equivalents in green algal fermentation. Plant Physiol., 83, 1022-1026.
Strain(s): 2169 
DOI: 10.1104/pp.83.4.1022
Oikawa, E. Ishibashi, Y., 2004 Species specificity of musty odor producing Phormidium tenue in Lake Kamafusa. Wat. Sci. Tech., 49, 41-46.
Keywords: 16S-rDNA sequence; 2-methylisoborneol; musty odor; Phormidium tenue phylogenetic tree
Strain(s): 3033512611 
Oikawa, E., Ishibashi, Y., Abe, T., Umetsu, H. 2000 Phylogenetic classification of musty odor and/or toxic compounds producing cyanobacteria. Environ. Eng. Res., 37, 183-191 (in Japanese with English summary).
Keywords: cyanobacteria; musty odor; 16S ribosomal RNA; PCR; phylogenetic trees
Strain(s): 3033512 
Oikawa, E., Ohnuma, T., Shimizu, A., Ishibashi, Y. 1994 Phylogenetic studies on musty odor producing cyanobacteria using the 16S ribosomal RNA [16S ribosômu RNA enki-hairetsu no hikaku ni yoru kabi-shû sansei ransô-rui no bunrui]. J. Jpn. Water Works Assoc. [Suidô-Kyôkai Zasshi], 63(12), 56-63 (in Japanese without English title).
Keywords: musty odor; gene; cyanobacteria
Strain(s): 36512 
Oishi, S., Watanabe, M. F. 1986 Acute toxicity of Microcystis aeruginosa and its cardiovascular effects. Environ. Res., 40, 518-524.
Strain(s): 3349 
Okamoto, N., Inouye, I. 2005 The katablepharids are a distant sister group of the Cryptophyta: a proposal for Katablepharidophyta divisio nova/Kathablepharida phylum novum based on SSU rDNA and beta-tubulin phylogeny. Protist, 156, 163-179.
Keywords: beta-tubulin; Cryptophyta; Katablepharidophyta/Kathablepharida; Katablepharis/Kathablepharis japonica; Leucocrypta; Leucocryptos marina; phylogeny; SSU rDNA
Strain(s): 13331334 
DOI: 10.1016/j.protis.2004.12.003
Okamura, H., Aoyama, I., Liu, D., Maguire, R. J., Pacepavicius, G. J., Lau, Y. L. 2000 Fate and ecotoxicity of the new antifouling compound irgarol 1051 in the aquatic environment. Water Res., 34, 3523-3530.
Keywords: antifouling compound; degradation product; ecotoxicity; fate; berbicide; Irgarol 1051; M1; Seto Inland Sea Japan; transformation
Strain(s): 35 
Okamura, H., Kitano, S., Toyota, S., Harino, H., Thomas, K. V. 2009 Ecotoxicity of the degradation products of triphenylborane pyridine (TPBP) antifouling agent. Chemosphere, 74, 1275-1278.
Keywords: Artemia; bioassay; biocide; biphenyl; marina; Skeletonema
Strain(s): 323 
PubMed: 19095285
DOI: 10.1016/j.chemosphere.2008.11.014
Okamura, H., Piao, M., Aoyama, I., Sudo, M., Okubo, T., Nakamura, M. 2002 Algal growth inhibition by river water pollutants in the agricultural area around Lake Biwa, Japan. Environ. Pollut., 117, 411-419.
Keywords: Algal bioassay; Herbicide; Lake Biwa; Runoff; Simetryn
Strain(s): 35 
Okamura, K. 1992 Growth characteristics of Skeletonema costatum for algal growth potential. Kanagawa-ken Kankyô Kagaku Sentâ Kenkyû Hôkoku, 15, 12-15 (in Japanese with English title).
Strain(s): 324 
Okano, K., Miyata, N., Ozaki, Y. 2015 Whole genome sequence of the non-microcystin-producing Microcystis aeruginosa strain NIES-44. GenomeA, 3, e00135-15 (article ID).
Strain(s): 44 
DOI: 10.1128/genomeA.00135-15
Okino, T., Matsuda, H., Murakami, M., Yamaguchi, K. 1993 Microginin, an angiotensin-converting enzyme inhibitor from the blue-green alga Microcystis aeruginosa. Tetrahedron Letters, 34, 501-504.
Strain(s): 100 
Okino, T., Matsuda, H., Murakami, M., Yamaguchi, K. 1995 New microviridins, elastase inhibitors from the blue-green alga Microcystis aeruginosa. Tetrahedron, 51, 10679-10686.
Strain(s): 298 
Okino, T., Murakami, M., Haraguchi, R., Munekata, H., Matsuda, H., Yamaguchi, K. 1993 Micropeptins A and B, plasmin and trypsin inhibitors from the blue-green alga Microcystis aeruginosa. Tetrahedron Letters, 34, 8131-8134.
Strain(s): 100 
Okino, T., Sun, Q., Matsuda, H., Murakami, M., Yamaguchi, K. 1997 Nostopeptins A and B, elastase inhibitors from the cyanobacterium Nostoc minutum. J. Nat. Prod., 60, 158-161.
Strain(s): 26 
Okubo, Y., Inoue, T., Yokoto, K. 2012 Estimating bioavailability of soil particulate phosphorus toMicrocystis aeruginosa. J. Appl. Phycol., 24, 1503-1507.
Keywords: Particulate phosphorus; Bioavailable phosphorus; Microcystis aeruginosa; Cyanobacteria; Sequential phosphorus extraction
Strain(s): 44 
Okumura, C., Saffreena, N., Rahman, M. A., Hasegawa, H., Miki, O., Takimoto, A. 2015 Economic efficiency of different light wavelengths and intensities using LEDs for the cultivation of green microalga Botryococcus braunii (NIES-836) for biofuel production. Environ. Prog. Sustain. Energy, 34, 269-275.
Keywords: microalgae; Botryococcus braunii (NIES-836); growth efficiency; light-emitting diodes (LEDS); economic efficiency
Strain(s): 836 
DOI: 10.1002/ep.11951
Okumura, Y., Koyama, J., Takaku, H., Satoh, H. 2001 Influence of organic solvents on the growth of marine microalgae. Arch. Environ. Contam. Toxicol., 41, 123-128.
Strain(s): 324 
Okuyama, H., Kogame, K., Takeda, S. 1993 Phylogenetic significance of the limited distribution of octadecapentaenoic acid in Prymnesiophytes and photocynthetic dinoflagellates. Polar Biol., 6, 21-26.
Strain(s): 353 
Omata, T., Murata, N. 1986 Glucolipid synthesis activities in cytoplasmic and the thylakoid membranes from the cytoplasmic Anacystis nidulans. Plant Cell Physiol., 27, 485-490.
Keywords: Anacystis nidulans; cyanobacterium; cytoplasmic membrane; glucolipid; lipid biosynthesis; thylakoid membrane
Strain(s): 21703277 
Omura, T., Umita, T., Aizawa, J., Komatsu, Y., Ishizaki, M., Onuma, M. 1991 Accumulation of extracellular non-volatile organic acids in batch cultures of Chlorella vulgaris and Microcystis aeruginosa. Jpn. J. Water Poll. Res., 14, 615-623 (in Japanese with English summary).
Keywords: Chlorella vulgaris; Microcystis aeruginosa; batch culture; non-volatile organic acids; dissolved organic carbon
Strain(s): 87227 
Onduka, T., Kakuno, A., Kono, K., Ito, K., Mochida, K., Fujii, K. 2012 Toxicity of chlorothalonil to marine organisms. Fish. Sci., 78, 1301-1308.
Keywords: Antifouling biocides; Toxicity; Early-life-stage Toxicity test; Predicted no-effect concentration
Strain(s): 324 
Onduka, T., Mochida, K., Harino, H., Ito, K., Kakuno, A., Fujii, K. 2010 Toxicity of metal pyrithione photodegradation products to marine organisms with indirect evidence for their presence in seawater. Arch. Environ. Contam. Toxicol., 58, 991-997.
Strain(s): 324 
Onduka, T., Ojima, D., Ito, M., Ito, K., Mochida, K., Fujii, K. 2013 Toxicity of degradation products of the antifouling biocide pyridine triphenylborane to marine organisms. Arch. Environ. Contam. Toxicol., 65, 724-732.
Strain(s): 324 
DOI: 10.1007/s00244-013-9945-x
Onduka, T., Ojima, D., Kakuno, A., Mochida, K., Ito, K., Koyama, J., Fujii, K. 2012 Nitrated polycyclic aromatic hydrocarbons in the marine environment: acute toxicities for organisms at three trophic levels. Jpn. J. Environ. Toxicol., 15, 1-10.
Keywords: alga; crustacean, fish, nitro-PAHs; predicted no effect concentrations
Strain(s): 324 
Onduka,T., Ojima, D., Ito, M., Ito, K., Mochida, K., Fujii, K. 2013 Toxicity of the antifouling biocide Sea-Nine 211 to marine algae, crustacea, and a polychaete. Fish. Sci., 79, 999-1006.
Keywords: Risk assessment; Ecological toxicity; Coastal area of Japan; Perinereis nuntia; Sediment toxicity test; No-observed-effect concentration
Strain(s): 324 
Onishi, Y., Mohri, Y., Tuji, A., Ohgi, K., Yamaguchi, A., Imai, I. 2014 The seagrass Zostera marina harbors growth-inhibiting bacteria against the toxic dinoflagellate Alexandrium tamarense. Fish. Sci., 80, 353-362.
Keywords: Toxic blooms; Alexandrium tamarense; Algicidal bacteria; Seagrass; Zostera marina; Mitigation; Prevention
Strain(s): 1 
Onji, M., Nakano, S.-I., Suzuki, S. 2003 Virus-like particles suppress growth of the red-tide-forming marine dinoflagellate Gymnodinium mikimotoi. Mar. Biotechnol., 5, 435-442.
Keywords: Gymnodinium mikimotoi; virus; red tide
Strain(s): 3 
Ono, M., Sawada, K., Kubota, M., Shiraiwa, Y. 2009 Change of the unsaturation degree of alkenone and alkenoate during acclimation to salinity change in Emiliania huxleyi and Gephyrocapsa oceanica with reference to palaeosalinity indicator. Res. Org. Geochem., 25, 53-60.
Strain(s): 837 
Ono, T., Murata, N., Fujita, T. 1983 Thermal analysis of membrane lipids from the blue-green algae Anacystis nidulans and Anabaena variabilis. Plant Cell Physiol., 24, 635-639.
Keywords: Anabaena variabilis; Anacystis nidulans; blue-green alga; lipid; thermal analysis; thylakoid membrane
Strain(s): 2093 
Ono, Y., Okamura,H., Kawara, O., Aoyama, I., Oda, Y. 1999 Genotoxicity and ecotoxicity of sediment in road runoff. J. Jpn. Soc. Wat. Environ., 22, 561-567 (in Japanese with English summary).
Keywords: road runoff; road sediment; genotoxicity; growth inhibition; acute toxicity
Strain(s): 35 
Onodera, H., Oshima, Y., Watanabe, M. F., Watanabe, M., Bolch, C. J., Blackburn, S., Yasumoto, T. 1996 Screening of paralytic shellfish toxins in freshwater cyanobacteria and chemical confirmation of the toxins in cultured Anabaena circinalis from Australia. In Intergovernmental Oceanographic Commissions of UNESCO, Eds. by Yasumoto, T., Oshima, Y. & Fukuyo, Y., p. 563-566.
Strain(s): 1063106810791084109010931099 
Ooi, T., Kusumi, T., Kakisawa, H., Watanabe, M. M. 1989 Structure of cyanoviridin RR, a toxin from the blue-green alga, Microcystis viridis. J. Appl. Phycol., 1, 31-38.
Keywords: blue-green alga; Microcystis viridis; cyanoviridin RR; microcystin RR, toxins
Strain(s): 102 
Osafune, T. 1973 Three-dimensional structures of giant mitochondria, dictyosomes and “concentric lamellar bodies” formed during the cell cycle of Euglena gracilis (Z) in synchronous culture. J. Electron Microscopy, 22, 51-61.
Strain(s): 48 
Osafune, T., Ehara, T., Ito, A., Hase, E. 1990 Incorporation of cytoplasmic structures by developing proplastids in dark-grown Euglena gracilis cells transferred to an inorganic medium in darkness. J. Electr. Microsc., 39, 168-171.
Keywords: Euglena gracilis; dark proplastid development; incorporation; cytoplasmic structure
Strain(s): 48 
Osafune, T., Ehara, T., Sumida, S., Hase, E. 1985 Interactions between the nucleus and cytoplasmic organelles durihg the cell cycle of Euglena gracilis in synchronized cultures. II. Associations between the nucleus and chloroplasts at an early stage of the cell cycle under photoautotrophic conditions. Plant Cell Physiol., 26, 263-270.
Keywords: cell cycle; chloroplast nucleoid; chloroplast-nucleus connection; chromosome; Euglena gracilis
Strain(s): 48 
Osafune, T., Ehara, T., Tahara, M., Hase, E. 1990 Effects of blue and red light on chloroplast development in dark-grown wax-rich cells of Euglena gracilis transferred to inorganic medium. J. Electr. Microsc., 39, 254-259.
Keywords: Euglena gracilis; blue and red light; chloroplast development
Strain(s): 48 
Osafune, T., Mihara, S., Hase, E., Ohkuro, I. 1972 Electron microscope studies on the vegetative cellular life cycle of Chlamydomonas reinhardi Dangeard in synchronous culture. I. Some characteristics of changes in subcellular structures during the cell cycle, especially in formation of giant mitochondria. Plant Cell Physiol., 13, 211-227.
Strain(s): 2235 
Osafune, T., Mihara, S., Hase, E., Ohkuro, I. 1972 Electron microscope studies on the vegetative cellular life cycle of Chlamydomonas reinhardi Dangeard in synchronous culture. II. Association of mitochondria and the chloroplast at an early developmental stage. Plant Cell Physiol., 13, 981-989.
Strain(s): 2235 
Osafune, T., Mihara, S., Hase, E., Ohkuro, I. 1975 Electron microscope studies on the vegetative cellular life cycle of Chlamydomonas reinhardi Dangeard in synchronous culture. III. Three-dimensional structures of mitochondria in the cells at intermediate stages of the growth phase of the cell cycle. J. Electr. Microsc., 24, 247-252.
Strain(s): 2235 
Osafune, T., Mihara, S., Hase, E., Ohkuro, I. 1975 Formation and division of giant mitochondria during the cell cycle of Euglena gracilis Z in synchronous culture. I. Some characteristics of changes in the morphology of mitochondria and oxygen-uptake activity of cells. Plant Cell Physiol., 16, 313-326.
Strain(s): 48 
Osafune, T., Mihara, S., Hase, E., Ohkuro, I. 1975 Formation and division of giant mitochondria during the cell cycle of Euglena gracilis Z in synchronous culture. II. Modes of division of giant mitochondria. J. Electron Microscopy, 24, 33-39.
Strain(s): 48 
Osafune, T., Mihara, S., Hase, E., Ohkuro, I. 1975 Formation and division of giant mitochondria during the cell cycle of Euglena gracilis Z in synchronous culture. III. Three-dimensional structures of mitochondria after division of giant forms. J. Electron Microscopy, 24, 283-286.
Strain(s): 48 
Osafune, T., Mihara, S., Hase, E., Ohkuro, I. 1976 Electron microscope studies on the vegetative cellular life cycle of Chlamydomonas reinhardi Dangeard in synchronous culture. IV. Mitochondria in dividing cells. J. Electr. Microsc., 25, 261-269.
Strain(s): 2235 
Osafune, T., Schiff. J. A., Hase, E. 1990 Immunogold localization of LHCP II apoprotein in the Golgi of Euglena. Cell Struct. Funct., 15, 99-105.
Keywords: Euglena; Golgi apparatus; immunogold localization; LHCP II
Strain(s): 48 
Osafune, T., Sumida, S., Ehara, T., Hase, E. 1989 Three-dimensional distribution of ribulose-1,5-bisphosphate carboxylase/oxygenase in chloroplasts of actively photosynthesizing cell of Euglena gracilis. J. Electr. Microsc., 38, 399-402.
Keywords: Euglena gracilis Z; immunoelectron microscopy; chloroplast; RuBisCO; three-dimensional distribution
Strain(s): 48 
Osafune, T., Sumida, S., Ehara, T., Kodama, M., Hase, E. 1990 Immunoelectron microscopic evidence for the occurrence of ribulose 1,5-bisphosphate carboxylase/oxygenase in "propyrenoids" of Euglena gracilis. J. Electr. Microsc., 39, 101-104.
Keywords: chloroplast development; Euglena; propyrenoid; ribulose-1,5-bisphosphate carboxylase/oxygenase; immunocytochemistry
Strain(s): 48 
Osafune, T., Yokota, A., Sumida, S., Hase, E. 1990 Immunogold localization of ribulose-1,5-bisphosphate carboxylase with reference to pyrenoid morphology in chloroplasts of synchronized Euglena gracilis cells. Plant Physiol., 92, 802-808.
Strain(s): 48 
DOI: 10.1104/pp.92.3.802
Ota, S., Vaulot, D. 2012 Lotharella reticulosa sp. nov.: a highly reticulated network forming chlorarachniophyte from the Mediterranean Sea. Protist, 163, 91-104.
Keywords: chlorarachniophytes; Lotharella; Mediterranean Sea; RCC375, RCC376; taxonomy
Strain(s): 2584 
PubMed: 21497132
DOI: 10.1016/j.protis.2011.02.004
Otsuka, S., Suda, S., Li, R., Matsumoto, S., Watanabe, M. M. 2000 Morphological variability of colonies of Microcystis morphospecies in culture. J. Gen. Appl. Microbiol., 46, 39-50.
Keywords: colony; cyanobacteria; Microcystis; morphology; phycoerythrin; pigment
Strain(s): 843901 
Otsuka, S., Suda, S., Li, R., Watanabe, M., Oyaizu, H., Matsumoto, S., Watanabe, M. M. 1998 16S rDNA sequences and phylogenetic analyses of Microcystis strains with and without phycoerythrin. FEMS Mircobiol. Lett., 164, 119-124.
Keywords: cyanobacterium; Microcystis; 16S rDNA; taxonomy
Strain(s): 105510671072108510901143 
Otsuka, S., Suda, S., Li, R., Watanabe, M., Oyaizu, H., Matsumoto, S., Watanabe, M. M. 1999 Phylogenetic relationships between toxic and non-toxic strains of the genus Microcystis based on 16S to 23S internal transcribed spacer sequence. FEMS Mircobiol. Lett., 172, 15-21.
Keywords: cyanobacteria; Microcystis; internal transcribed spacer; phylogeny; microcystin
Strain(s): 4411110551058106710681072108510861090109110921105111511171143 
Otsuka, S., Suda, S., Shibata, S., Oyaizu, H., Matsumoto, S., Watanabe, M. M. 2001 A proposal for the unification of five species of the cyanobacterial genus Microcystis Kützing ex Lemmermann 1907 under the rules of the Bacteriological Code. Int. J. Syst. Evol. Microbiol., 51, 873-879.
Keywords: cyanobacteria; DNA-DNA hybridization; Microcystis; taxonomy; unification
Strain(s): 843 
Otsuki, A., Watanabe, M. M., Sugahara, K. 1987 Chlorophyll pigments in methanol extracts from ten axenic cultured diatoms and three green algae as determined by reverse phase HPLC with fluorometric detection. J. Phycol., 23, 406-414.
Keywords: chlorophyll c complex; chlorophyll pigments; diatoms; field desorption mass spectrometry; methanol extracts; reverse phase HPLC
Strain(s): 16565771157225534 
Oyama, Y., Matsushita, B., Fukushima, T., Chen, J., Nagai, T., Imai, A. 2010 Testing the spectral decomposition algorithm (SDA) for different phytoplankton species by a simulation based on tank experiments. Int. J. Remote Sens., 31, 1605-1623.
Strain(s): 4475803 
Ozaki, K., Ito, E., Tanabe, S., Natsume, K., Tsuji, K., Harada, K. 2009 Electron microscopic study on lysis of a cyanobacterium Microcystis. J. Health Sci., 55, 578-585.
Keywords: cyanobacteria; scanning electron microscope; transmission electron microscope; morphological change; b-cyclocitral; L-lysine
Strain(s): 102298 
Ozaki, K., Ohta, A., Iwata, C., Horikawa, A., Tsuji, K., Ito, E., Ikai, Y., Harada, K-I. 2008 Lysis of cyanobacteria with volatile organic compounds. Chemosphere, 71, 1531-1538.
Keywords: Cyanobacteria; Lysis; Microorganism; Volatile compound; b-Cyclocitral
Strain(s): 102112298 
PubMed: 18179811
DOI: 10.1016/j.chemosphere.2007.11.052
Pan, H., Song, L., Liu, Y., Börner, T. 2002 Detection of hepatotoxic Microcystis strains by PCR with intact cells from both culture and environmental samples. Arch. Microbiol., 178, 421-427.
Keywords: Cyanobacteria; Microcystis; Microcystin; Toxin; Peptide synthetase; Whole-cell PCR
Strain(s): 429098595610 
Park, B. S., Baek, S. H., Ki, J.-S., Cattolico, R. A., Han, M.-S. 2012 Assessment of EvaGreen-based quantitative real-time PCR assay for enumeration of the microalgae Heterosigma and Chattonella (Raphidophyceae). J. Appl. Phycol., 24, 1555-1567.
Keywords: Raphidophyceae; Quantitative real-time PCR; EvaGreen; Field application
Strain(s): 293 
Park, H-D., Hayashi, H. 1994 Microcystis and microcystins [Microcystis zoku to mikuroshisuchin]. In Waterbloom of Blue-green Algae and Their Toxins [Aoko, sono shutsugen to dokuso], Eds. by Watanabe, M. F., Harada,K. & Fujii, H., University of Tokyo Press, p. 75-99 (in Japanese without English title).
Strain(s): 741053105510591061106310641066106710681070107210741076107710791080108110831084108510861090109110931095109710981099114011543349 
Park, H-D., Watanabe, M. F. 1996 Toxic Microcystis in eutrophic lakes. In Toxic Microcystis, Eds. by Watanabe, M.F., Harada, K., Carmichael W.W. & Fujii, H., CRC Press, Boca Raton, p. 57-77.
Strain(s): 7410631074107910851086109011543349 
Park, H-D., Watanabe, M. F., Harada, K., Nagai, H., Suzuki, M., Watanabe, M., Hayashi, H. 1993 Hepatotoxin (microcystin) and neurotoxin (anatoxin-a) contained in natural blooms and strains of cyanobacteria from Japanese freshwaters. Natural Toxins, 1, 353-360.
Keywords: Anabaena; anatoxin-a; neurotoxin; Microcystis; microcystin; hepatotoxin; natural bloom; strain; Japanese freshwaters; simultaneous analysis of anatoxin-a and microcystin
Strain(s): 741063107410791085108610903349 
Park, M.-H., Kim, B.-H., Chung, I. M., Hwang, S.-J. 2009 Selective bactericidal potential of rice (Oryza sativa L. var. japonica) full extract on Microcystis strain in comparison with green algae and zooplankton. Bull. Environ. Contam. Toxicol., 83, 97-101.
Keywords: Rice hull extract; Selective control; Microcystis aeruginosa; Green alga; Zooplankton
Strain(s): 298 
Pedersén, M., DaSilva, E. J. 1973 Simple brominated phenols in the bluegreen alga Calothrix brevissima West. Planta, 115, 83-86.
Strain(s): 22 
Pelusi, A., Hanawa, Y., Araie, H., Suzuki, I., Giordan, M., Shiraiwa, Y. 2016 Rapid detection and quantification of haptophyte alkenones by Fourier transform infrared spectroscopy (FTIR). Algal Research, 19, 48-56.
Keywords: Alkenones; Alkenone-producing haptophyte; Emiliania huxleyi; FTIR; Lipid;trans-Carbon-carbon double bond
Strain(s): 837 
DOI: 10.1016/j.algal.2016.07.006
Pham, T., Shimizu, K., Dao, T., Hong-Do, L., Utsumi, M. 2015 Microcystin uptake and biochemical responses in the freshwater clam Corbicula leana P. exposed to toxic and non-toxic Microcystis aeruginosa: Evidence of tolerance to cyanotoxins. Toxicology Report, 2, 88-98.
Keywords: Bioaccumulation; Biochemical response; Corbicula leana; Microcystins; Toxic and non-toxic
Strain(s): 10862170 
DOI: 10.1016/j.toxrep.2015.01.012
Pjon, C.-J., Fujita, Y. 1973 Immunological identification of pigment component of a photochemically active chromoprotein (ACP) isolated from the blue-green alga Anabaena cylindrica. Plant Cell Physiol., 14, 201-205.
Strain(s): 19 
Pjon, C.-J., Fujita, Y. 1974 The separation and characterization of the photoreactive component of a photochemically active chromoprotein (ACP) obtained from the blue-green alga Anabaena cylindrica. Plant Cell Physiol., 15, 789-797.
Strain(s): 19 
Pjon, C.-J., Suzuki, R., Fujita, Y. 1972 Photochemical activity fluorescence and absorption spectrum of the photochemically active chromoprotein (ACP) isolated from the blue-green alga Anabaena cylindrica. Plant Cell Physiol., 13, 437-447.
Strain(s): 19 
Pombert, J. F., Beauchamp, P., Otis, C., Lemieux, C., Turmel, M. 2006a The complete mitochondrial DNA sequence of the green alga Oltmannsiellopsis viridis: evolutionary trends of the mitochondrial genome in the Ulvophyceae. Curr. Genet., 50, 137-147.
Keywords: green algae; mitochondrial genome evolution; horizontal DNA transfers; introns; repeated sequences
Strain(s): 360 
Pombert, J.-F., Lemieux, C., Turmel, M 2006b The complete chloroplast DNA sequence of the green alga Oltmannsiellopsis viridis reveals a distinctive quadripartite architecture in the chloroplast genome of early diverging ulvophytes. BMC Biol., 4, 3 (article ID).
Strain(s): 360 
Poonkum, W., Powtongsook, S., Pavasant, P. 2015 Astaxanthin induction in microalga H. pluvialis with flat panel airlift photobioreactors under indoor and outdoor conditions. Prep. Biochem. Biotechnol., 45, 1-17.
Keywords: carotenoid; Haematococcus pluvialis; mature cyst; microalgae; pigment; scale-up
Strain(s): 144 
DOI: 10.1080/10826068.2013.867871
Qiu, XC., Shimasaki, Y., Tsuyama, M., Tamada, T., Kuwahara, R., Kawaguchi, M., Honda, M., Gunjikake, H., Tasmin, R., Shimizu, M., Sato, Y., Kato-Unoki, Y., Nakashima, T., Matsubara, T., Yamasaki, Y., Ichinose, H., Wariishi, H., Honjo, T., Oshima, Y. 2013 Growth-phase dependent variation in photosynthetic activity and cellular protein expression profile in the harmful Raphidophyte Chattonella antiqua. Biosci. Biotechnol. Biochem., 77, 46-52.
Keywords: Chattonella antiqua; growth potential; maximum quantum yield of photosystem II; physiological status; proteomic analysis
Strain(s): 1 
PubMed: 23291769
DOI: 10.1271/bbb.120543
Qiu, XC., Yamasaki, Y., Shimasaki, Y., Gunjikake, H., Honda, M., Kawagushi, M., Matsubara, T., Nagasoe, S., Etoh, T., Matsui, S., Honjo, T., Oshima, Y. 2012 Allelopathy of the raphidophyte Heterosigma akashiwo against the dinoflagellate Akashiwo sanguinea is mediated via allelochemicals and cell contact. Mar. Ecol. Prog. Ser., 446, 107-118.
Keywords: Heterosigma akashiwo; Akashiwo sanguinea; Allelopathy; Polysaccharide−protein complex; Cell contact; Growth interaction; Growth simulation
Strain(s): 10324 
Qiu, XC., Yamasaki, Y., Shimasaki, Y., Gunjikake, H., Matsubara, T., Nagasoe, S., Etoh, T., Matsui, S., Honjo, T., Oshima, Y. 2011 Growth interactions between the raphidophyte Chattonella antiqua and the dinoflagellate Akashiwo sanguinea. Harmful Algae, 11, 81-87.
Keywords: Akashiwo sanguinea; Allelopathy; Cell contact; Chattonella antiqua; Growth interaction; Growth simulation
Strain(s): 1 
Rahman, D. Y, Sarian, F. D., van WijkM, A., Martinez-Garcia, M., van der Maarel, M. J. E. C. 2016 Thermostable phycocyanin from the red microalga Cyanidioschyzon merolae, a new natural blue food colorant. J. Appl. Phycol., ,
Keywords: Food colorant; Phycocyanin; Pigments; Red microalga; Cyanidioschyzon merolae
Strain(s): 1332 
DOI: 10.1007/s10811-016-1007-0
Ranga Rao, A., Ravishankar, G. A., Sarada, R. 2012 Cultivation of green alga Botryococcus braunii in raceway, circular ponds under outdoor conditions and its growth, hydrocarbon production. Biores. Technol., 123, 528-533.
Keywords: Microalgae; Botryococcus braunii; Outdoor cultivation; Hydrocarbon; Fatty acids
Strain(s): 836 
DOI: 10.1016/j.biortech.2012.07.009
Ranjbar, R., Inoue, R., Katsuda, T., Yamaji, H., Katoh, S. 2008 High efficiency production of astaxanthin in an airlift photobioreactor. J. Biosci. Bioeng., 106, 204-207.
Keywords: Haematococcus pluvialis; airlift bubble column; liquid circulation;nirate concentration; astaxanthin
Strain(s): 144 
Ranjbar, R., Inoue, R., Shiraishi, H., Katsuda, T., Katoh, S. 2008 High efficiency production of astaxanthin by autotrophic cultivation of Haematococcus pluvialis in a bubble column photobioreactor. Biochem. Eng. J., 39, 575-580.
Keywords: Haematococcus pluvialis; autotrophic culture; bubble column; Fed-batch; nitrate concentration astaxanthin
Strain(s): 144 
Rhee, JS., Choi, BS., Han, J., Hwang, SJ., Choi, IY., Lee, JS. 2012 Draft genome database construction from four strains (NIES-298, FCY-26, -27, and -28) of the Cyanobacterium Microcystis aeruginosa. J. Microbiol. Biotechnol., 22, 1208-1213.
Keywords: Cyanobacteria; Microcystis aeruginosa; genome
Strain(s): 298 
Rhee, JS., Ki, JS., Kim, BM., Hwang, SJ., Choi, IY., Lee, JS. 2012 HspA and HtpG Enhance Thermotolerance in the Cyanobacterium, Microcystis aeruginosa NIES-298. J. Microbiol. Biotechnol., 22, 118-125.
Keywords: Cyanobacteria; Microcystis aeruginosa; heat shock protein; thermotolerance
Strain(s): 298 
Rho, M.-C., Yasuda, K., Matsunaga, K., Ohizumi, Y. 1997 A monogalactopyranosyl acylglycerol from Oltmannsiellopsis unicellularis (NIES-359). Phytochemistry, 44, 1507-1509.
Keywords: Oltmannsiellopsis unicellularis; Chlorophyceae; marine alga; glycolipid; monogalactopyranosyl acylglycerol; platelet aggregation
Strain(s): 359 
Robertson, B. R., Tezuka, N., Watanabe, M. M. 2001 Phylogenetic analyses of Synechococcus strains (cyanobacteria) using sequences of 16S rDNA and part of the phycocyanin operon reveal multiple evolutionary lines and reflect phycobilin content. Int. J. Syst. Evol. Microbiol., 51, 861-871.
Keywords: cyanobacteria; phycocyanin; phylogeny; 16S rDNA; Synechococcus
Strain(s): 937938939940941942943944945946947948949950951952953954955956957958959960961962963964965 
Rodríguez-Salinas, E., Riveros-Rosas, H., Li, ZK., Fučíková, K., Brand JJ., Lewis, LA., González-Halphen, D. 2012 Lineage-specific fragmentation and nuclear relocation of the mitochondrial cox2 gene in chlorophycean green algae (Chlorophyta). Mol. Phylogenet. Evol., 64, 166-176.
Keywords: Mitochondrial genes; Cytochrome oxidase; Chlorophyte algae; Chlorophyceae; Gene migration; Gene fragmentation
Strain(s): 360484 
PubMed: 22724135
DOI: 10.1016/j.ympev.2012.03.014
Rounge, T. B., Rohrlack, T., Kristensen, T., Jakobsen, K. S. 2008 Recombination and selectional forces in cyanopeptolin NRPS operons from highly similar, but geographically remote Planktothrix strains. BMC Microbiol., 8, 141 (article ID).
Strain(s): 205 
Sadakane, H., Hatano, S. 1982 Isoenzymes of glucose 6-phosphate dehydrogenase in relation to frost hardiness of Chlorella ellipsoidea. In Plant Cold Hardiness and Freezing Stress, Eds. by Li, P. H. & Sakai, A., Academic Press, New York, p. 157-167.
Strain(s): 2170 
Sadakane, H., Ishibashi, K., Yosimoto, M., Hatano, S. 1981 Effects of low temperature, light and O2 on chilling-sensitive and -resistant strains in Chlorella ellipsoidea. Plant Cell Physiol., 22, 657-666.
Keywords: chilling injury; Chlorella ellipsoidea; O2 evolution; O2 uptake
Strain(s): 2170 
DOI: 10.1093/oxfordjournals.pcp.a076209
Sadakane, H., Kabata, K., Ishibashi, K., Watanabe, T., Hatano, S. 1980 Studies on frost hardiness in Chlorella ellipsoidea. V. The role of glucose and related compounds. Environ. Exp. Bot., 20, 297-305.
Strain(s): 2170 
Sadakane, H., Kawanami, T., Imamura, H., Fukumoto, K., Kawai, Y., Hatano, S. 1978 Studies on synchronous culture in three of Chlorella ellipsoidea with different susceptibilities to low temperature. Sci. Bull. Fac. Agr., Kyushu Univ., 32, 161-168 (in Japanese).
Strain(s): 2170 
Saijo, H., Tsuruta, K., Kusumoto, N., Ashitani, T., Takahashi, K. 2013 Growth inhibition activities of Sugi bark components against Heterosigma akashiwo. J. Wood Sci., 59, 238-242.
Keywords: Sugi bark; Extract; Inhibition activity; Red tide plankton; Heterosigma akashiwo
Strain(s): 293 
Saito, K., Matsumoto, M., Sekine, T., Murakoshi, I. 1989 Inhibitory substances from Myriophyllum brasiliense of growth of blue-green algae. J. Nat. Prod., 52, 1221-1226.
Strain(s): 44 
Sakaguchi, M., Hausmann, K., Suzaki, T. 1998 Food capture and adhesion by the heliozoon Actinophrys sol. Protoplasma, 203, 130-137.
Keywords: Actinophrys sol; Exocytosis; Extrusomes; Feeding behavior; Heliozoa; Prey adhesion
Strain(s): 2497 
Sakaguchi, M., Murakami, H., Suzaki, T. 2001 Involvement of a 40-kDa glycoprotein in food recognition, prey capture, and induction of phagocytosis in the protozoon Actinophrys sol. Protist, 152, 33-41.
Strain(s): 24973374 
PubMed: 11401035
DOI: 10.1078/1434-4610-00041
Sakaguchi, M., Suzaki, T., Shigenaka, Y. 1997 Statistical analysis of spatial patterns of the heliozoan Actinophrys sol. Protoplasma, 196, 117-122.
Keywords: Heliozoa; Spatial point pattern; Cell distribution; Interaction potential; Likelihood analysis
Strain(s): 2497 
Sakaguchi, M., Suzuki, T. 1999 Monoxenic culture of the heliozoon Actinophrys sol. Eur. J. Protistol., 35, 1-10.
Keywords: Actinophrys sol; Antibiotic; Heliozoa; Monoxenic Culture
Strain(s): 24973374 
DOI: 10.1016/S0932-4739(99)80050-9
Sakaguchi, M., Suzuki, T., Khan, S. M. M. K. Hausmann, K. 2002 Food capture by kinetocysts in the heliozoon Raphidiophrys contractilis. Eur. J. Protistol., 37, 453-458.
Keywords: Exocytosis; Extrusome; Heliozoa; Kinetocyst
Strain(s): 24983374 
DOI: 10.1078/0932-4739-00847
Sakaguchi, T., Horikoshi, T., Nakajima, A. 1978 Uptake of uranium from seawater by microalgae. J. Ferm. Technol., 56, 561-565.
Strain(s): 213821392279 
Sakaguchi, T., Tsuji, T., Nakajima, A., Horikoshi, T. 1979 Accumulation of cadmium by green microalgae. Eur. J. Appl. Microbiol. Biotechnol., 8, 207-215.
Strain(s): 227322742279 
Sakai, H., Katayama, H., Oguma, K., Ohgaki, S. 2011 Effect of photoreactivation on ultraviolet inactivation of Microcystis aeruginos. Water Sci. Technol., 63, 1224-1229.
Keywords: Microcystis aeruginosa; photoreactivation; UV treatment
Strain(s): 98 
Sakai, H., Ogawa, K., Katayama, H., Ohgaki, S. 2005 Growth inhibition of Anabaena variabilis by low- or medium-pressure UV lamp irradiation. Environ. Eng. Res., 42, 495-501 (in Japanese with English summary).
Keywords: growth inhibition; Anabaena variabilis; UV irradiation; model calculation
Strain(s): 23 
Sakai, H., Ogawa, K., Katayama, H., Ohgaki, S. 2005 Low- or medium-pressure UV lamp inactivation of Microcystis aeruginosa. J. Water Environ. Technol., 3, 55-61.
Keywords: Microcystis aeruginosa; low-pressure (LP) UV lamp; medium-pressure (MP) UV lamp; endonuclease sensitive site (ESS) assay; photoreactivation
Strain(s): 98 
Sakai, H., Oguma, K., Katayama, H., Ohgaki, S. 2007 Effects of low- or medium-pressure ultraviolet lamp irradiation on Microcystis aeruginosa and Anabaena variabilis. Wat. Res., 41, 11-18.
Keywords: Microcystis aeruginosa; Anabaena variabilis; Low-pressure ultraviolet lamp; Medium-pressure ultraviolet lamp; DNA damage; Photosynthetic activity
Strain(s): 2398 
Sakami, T., Sakamoto, S., Takagi, S., Inaba, N., Imai, I. 2017 Distribution of three algicidal Alteromonas sp. strains in seagrass beds and surrounding areas in the Seto Inland Sea, Japan. Fish. Sci., 83, 113-121.
Keywords: Algicidal bacteria; Real-time polymerase; chain reaction; Zostera marina; Harmful algal bloom; Most probable number
Strain(s): 1 
DOI: 10.1007/s12562-016-1048-y
Sakamori, S., Uraya, K., Annen, K. 2001 Eutrophication of the sea area (III). Bull. Toyama Pref. Environ. Sci. Res. Center, 29, 34-42 (in Japanese with English summary).
Strain(s): 561 
Sakamori, S., Yoshikawa, H., Annen, K. 2000 The research on the eutrophication of the sea area (II). Bull. Toyama Pref. Environ. Sci. Res. Center, 28, 31-41 (in Japanese with English summary).
Strain(s): 561 
Sakamoto, S., Murata, N., Ohmori, M. 1991 The concentration of cyclic AMP and adenylate cyclase activity in cyanobacteria. Plant Cell Physiol., 32, 581-584.
Keywords: adenylate cyclase; cyanobacterium; cyclic AMP; cyclic nucleotide phosphodiesterase
Strain(s): 19 
Sakamoto, S., Yamaguchi, M., Watanabe, M. F., Watanabe, M., Kamiya, H. 1996 Distribution and characterization of lectins from natural and cultured Microcystis spp. In Harmful and Toxic Algal Blooms, Eds. by Yasumoto, T., Oshima, Y. & Fukuyo, Y., Intergovernmental Oceanographic Commission of UNESCO 1996, p. 569-572.
Strain(s): 1001021062981057106110661080 
Sakamoto, T., Kumihashi, K., Kunita, S., Masaura, T., Inoue-Sakamoto, K., Yamaguchi, M. 2011 The extracellular-matrix-retaining cyanobacterium Nostoc verrucosum accumulates trehalose, but is sensitive to desiccation. FEMS Microbiol. Ecol., 77, 385-394.
Keywords: compatible solute; stress tolerance; extracellular; polysaccharide; water stress protein (WspA)
Strain(s): 2539 
Sakayama, H. 2008 Taxonomic of Nitella (Charales, Charophyceae) based on comparative morphology of oospores and multiple DNA marker phylogeny using cultured material. Phycol. Res., 56, 202-215.
Keywords: Charales; Charophyceae; chloroplast DNA; morphology; Nitella; nuclear DNA; oospores; scanning electron microscopy; taxonomy; Tieffallenia
Strain(s): 16111615170417051706 
Sakayama, H., Arai, S., Nozaki. H., Kasai, F., Watanabe, M. M. 2006 Morphology, molecular phylogeny and taxonomy of Nitella comptonii (Charales, Characeae). Phycologia, 45, 417-421.
Keywords: atpB gene; Charales; Charophyceae; internal transcribed spacer region; Japanese taxa; morphology; Nitella comptonii; oospores; psaB gene; rbcL gene; scanning electron microscopy; taxonomy
Strain(s): 170417051706 
Sakayama, H., Hara Y., Nozaki, H. 2004 Taxonomic re-examination of six species of Nitella (Charales, Charophyceae) from Asia, and phylogenetic relationships within the genus based on rbcL and atpB gene sequences. Phycologia, 43, 91-104.
Strain(s): 1615 
Sakayama, H., Hara, Y., Arai, S., Sato, H., Nozaki, H. 2004 Phylogenetic analyses of Nitella subgenus Tieffallenia (Charales, Charophyceae) using nuclear ribosomal DNA internal transcribed spacer sequences. Phycologia, 43, 672-681.
Strain(s): 1615 
Sakayama, H., Miyaji, K., Nagumo, T., Kato, M., Hara Y., Nozaki, H. 2005 Taxonomic re-examination of 17 species of Nitella subgenus Tieffallenia (Charales, Charophyceae) based on internal morphology of the oospore wall and multiple DNA marker sequences. J. Phycol., 41, 195-211.
Keywords: Charales; Charophyceae; chloroplast DNA; morphology; Nitella; nuclear DNA; oospores; scanning electron microscopy; taxonomy; Tieffallenia
Strain(s): 1615 
Sakayama, H., Nozaki, H., Kasaki, H., Hara Y. 2002 Taxonomic re-examination of Nitella (Charales, Charophyceae) from Japan, based on microscopical studies of oospore wall ornamentation and rbcL gene sequences. Phycologia, 41, 397-408.
Strain(s): 1615 
Sakio, Y., Ishibashi, M., Okuyama, E. 2000 Chemical constituents of a diatom Triceratium dubium. Nat. Med., 54, 104.
Keywords: Triceratium dubium; diatom; microalgae; epiloliolide; phaeophorbide
Strain(s): 556 
Sako, Y., Adachi, M., Ishida, Y. 1995 Specific monoclonal antibodies and DNA probes for the identification of the toxic dinoflagellate genus Alexandrium. In Harmful Marine Algal Blooms, Eds. by Lassus, P., et al., Lavoisier, Intercept Ltd., p. 77-82.
Strain(s): 5 
Sako, Y., Hosoi-Tanabe, S., Uchida, A. 2004 Fluorescence in situ hybridization using rRNA-targeted probes for simple and rapid identification of the toxic dinoflagelates Alexandrium tamarense and Alexandrium catenella. J. Phycol., 40, 598-605.
Keywords: Alexandrium; FISH method; LSU rRNA; molecular identification; paralytic shellfish poisoning (PSP); probe; toxic dinoflagellate
Strain(s): 112 
Sakurai, K., Mori, N., Sato, N. 2014 Detection and characterization of phosphatidylcholine in various strains of the genus Chlamydomonas (Volvocales, Chlorophyceae). J. Plant Res., 127, 641-650.
Keywords: Chlamydomonas; Delta 5 desaturase; Diacylglyceryl-N,N,N-trimethylhomoserine; Fatty acid; Phosphatidylcholine
Strain(s): 2207 
DOI: 10.1007/s10265-014-0644-0
Saldarriaga, J. F., McEwan, M. L., Fast, N. M., Taylor, F. J. R., Keeling, P. J. 2003 Multiple protein phylogenies show that Oxyrrhis marina and Perkinsus marinus are early branches of the dinoflagellate lineage. Int. J. Syst. Evol. Microbiol., 53, 355-365.
Strain(s): 304 
Saldarriaga, J. F., Taylor, F. J. R., Keeling, P. J., Cavalier-Smith, T. 2001 Dinoflagellate nuclear SSU rRNA phylogeny suggests multiple plastid losses and replacements. J. Mol. Evol., 53, 204-213.
Keywords: Plastid; Dinoflagellates; Small subunit rRNA; Phylogeny; Endosymbiosis
Strain(s): 304365 
Sano, D., Ishifuji, S., Sato, Y., Imae, Y., Takaara, T., Masago, Y., Omura, T. 2011 Identification and characterization of coagulation inhibitor proteins derived from cyanobacterium Microcystis aeruginosa. Chemosphere 82, 1096-1102.
Keywords: Aluminum-immobilized affinity; chromatography; Coagulation inhibition; Cyanobacterial protein; Microcystis aeruginosa; Phage display; Polyaluminum chloride
Strain(s): 91 
PubMed: 21211815
DOI: 10.1016/j.chemosphere.2010.12.005
Sano, T., Kaya, K. 1995a Oscillamide Y, a chymotrypsin inhibitor from toxic Oscillatoria agardhii. Tetrahedron Letters, 36, 5933-5936.
Strain(s): 610 
DOI: 10.1016/0040-4039(95)01198-Q
Sano, T., Kaya, K. 1995b A 2-amino-2-butenoic acid (Dhb)-containing microcystin isolated from Oscillatoria agardhii. Tetrahedron Letters, 36, 8603-8606.
Strain(s): 610 
DOI: 10.1016/0040-4039(95)01824-2
Sano, T., Kaya, K. 1996 Oscillapeptin G, a tyrosinase inhibitor from toxic Oscillatoria agardhii. J. Nat. Prod., 59, 90-92.
Strain(s): 610 
Sano, T., Takagi, H., Nagano, K., Nishikawa, M., Kaya, K. 2011 Accurate LC-MS analyses for microcystions using per-15N-labeled microcystins. Anal. Bioanal. Chem., 399, 2511-2516.
Keywords: Microcystin; Stable isotope; Surrogate; Liquid chromatography-mass spectrometry; Accurate analysis
Strain(s): 107 
DOI: 10.1007/s00216-010-4639-y
Sargent, D. F., Taylor, C. P. S. 1972 Light-induced inhibition of respiration in DCMU-poisoned Chlorella caused by phytosystem I activity. Can. J. Bot., 50, 13-21.
Strain(s): 2151 
Sasa, T. 1957 Effect of photphorescent particles suspended in the medium upon the efficiency of light-energy utilization by Chlorella cells. J. Gen. Appl. Microbiol., 3, 121-124.
Strain(s): 2170 
Sasa, T., Kunieda, R., Tamiya, H. 1960 Growing Daphnia (water-fleas) with Chlorella. J. Gen. Appl. Microbiol., 6, 252-255.
Strain(s): 2170 
Sasa, T., Takaichi, S. Hatakeyama, N., Watanabe, M. M. 1992 A novel carotenoid ester, loroxanthin dodecenoate, from Pyramimonas parkeae (Prasinophyceae) and a chlorarachniophycean alga. Plant Cell Physiol., 33, 921-925.
Keywords: (3R,3'R,6'R)-β,ε-carotene-3,19,3'-triol 19-(2-dodecanoate); chlorarachniophyte; 1H-NMR; loroxanthin dodecenoate; Pyramimonas parkeae
Strain(s): 254 
Sasaki, G., Katoh, K., Hirose, N., Suga, H., Kuma, K., Miyata, T., Su, Z. H. 2007 Multiple receptor-like kinase cDNAs from liverwort Marchantia polymorpha and two charophycean green algae, Closterium ehrenbergii and Nitella axillaris: Extensive gene duplications and gene shufflings in the early evolution of streptophytes. Gene, 401(1-2), 135-144.
Keywords: conjugate alga; stonewort; gene family; divergence; phylogenetic tree; molecular evolution
Strain(s): 228 
Sasaki, K., Marquez, F. J., Nishio, N., Nagai, S. 1995 Promotive effect of 5-aminolevulinic acid on the growth and photosynthesis of Spirulina platensis. J. Ferment. Bioeng., 79, 453-457.
Keywords: 5-aminolevulinic acid; Spirulina platensis; phycocyanin; chlorophyll
Strain(s): 39 
DOI: 10.1016/0922-338X(95)91261-3
Satjarak, A., Graham, L. E. 2017 Comparative DNA sequence analyses of Pyramimonas parkeae (Prasinophyceae) chloroplast genomes. J. Phycol., 53, 415-424.
Keywords: chloroplast DNA variation; chloroplast genome; intraspecific variation; prasinophyte; Pyramimonas parkeae
Strain(s): 254 
PubMed: 28130930
DOI: 10.1111/jpy.12515
Sato, M., Murata, Y., Mizusawa, M., Iwahashi, H., Oka, S.-I. 2004 A simple and rapid dual-fluorescence viability assay for microalgae. Microbiol. Cult. Coll., 20, 53-59.
Keywords: microalgae; SYTOX Green; viability assay; autofluorescence
Strain(s): 32 
Sato, N., Mori, N., Hirashima, T., Moriyama, T. 2016 Diverse pathways of phosphatidylcholine biosynthesis in algae as estimated by labeling studies and genomic sequence analysis. Plant J., 87, 281–292.
Keywords: Chlamydomonas; Cyanidioschyzon merolae; phosphatidylcholine biosynthesis; phosphatidylethanolamine methyltransferase; phosphoethanolamine methyltransferase
Strain(s): 22072242 
PubMed: 27133435
DOI: 10.1111/tpj.13199
Sato, N., Moriyama, T. 2007 Genomic and biochemical analysis of lipid biosynthesis in the unicellular Rhodophyte Cyanidioschyzon merolae: lack of a plastidic desaturation pathway results in the coupled pathway of galactolipid synthesis. Eukaryot. Cell, 6, 1006-1017.
Strain(s): 3377 
Sato, N., Murata, N. 1981 Studies on the temperature shift-induced desaturation of fatty acids in monogalactosyl diacylglycerol in the blue-green alga (cyanobacterium) Anabaena variabilis. Plant Cell Physiol., 22, 1043-1050.
Keywords: Anabaena variabilis; cyanobacterium; fatty acid desaturation; monogalactosyl diacylglycerol; temperature shift
Strain(s): 2093 
Sato, N., Murata, N. 1982 Lipid biosynthesis in the blue-green alga (cyanobacterium), Anabaena variabilis. III. UDPglucose: diacylglycerol glucosyltransferase in vitro. Plant Cell Physiol., 23, 1115-1120.
Keywords: Anabaena variabilis; blue-green alga; glucosyltransterase; glyceroglycolipids; monoglucosyl diacylglycerol
Strain(s): 2093 
Sato, N., Murata, N. 1982 Lipid biosynthesis in the blue-green alga, Anabaena variabilis. I. Lipid class. Biochim. Biophys. Acta, 710, 271-278.
Strain(s): 2093 
Sato, N., Murata, N. 1982 Lipid biosynthesis in the blue-green alga, Anabaena variabilis. II. Fatty acids and lipid molecular species. Biochim. Biophys. Acta, 710, 279-289.
Strain(s): 2093 
Sato, N., Murata, N., Miura, Y., Ueta, N. 1979 Effect of growth temperature on lipid and fatty acid compositions the blue-green algae, Anabaena variabilis and Anacystis nidulans. Biochim. Biophys. Acta, 572, 19-28.
Strain(s): 3277 
Sato, N., Seyama, Y., Murata, N. 1986 Lipid-linked desaturation of palmitic acid in monogalactosyl diacylglycerol in the blue-green alga (cyanobacterium) Anabaena variabilis studied in vivo. Plant Cell Physiol., 27, 819-835.
Keywords: Anabaena variabilis; blue-green alga (cyanobacterium); lipid-linked desaturation; mass spectroscopy; monogalactosyl diacylglycerol; palmitoleic acid biosynthesis
Strain(s): 2093 
Sato, R., Fujishima, H., Itabashi, Y. 2003 Analysis of algal phosphatidylglycerols by chiral phase high-performane liquid chromatography. Bull. Fish. Sci. Hokkaido Univ., 54, 7-12 (in Japanese with English summary).
Keywords: phosphatidylglycerol; diastereomer; Enteromorpha sp.; Chlorella vulgaris; Heterosigma akashiwo; spinach; parsley; green tea; chiral phase HPLC; 3,5-dinitrophenylurethane
Strain(s): 227 
Sato, S., Nishimura, T., Uehara, K., Sakanari, H., Tawong, W., Hariganeya, N., Smith, K., Rhodes, L., Yasumoto, T., Taira, Y., Suda, S., Yamaguchi, H., Adachi, M. 2011 Phylogeography of Ostreopsis along West Pacific coast, with special reference to a novel clade from Japan. PLoS One, 6, e27983 (article ID).
Strain(s): 33513353 
DOI: 10.1371/journal.pone.0027983
Sato, Y., Ito, A., Tate, N., Sasaki, A., Aizawa, J., Umita, T. 2008 Impact of coexistent metal on survival of diatom in presence of polynuclear hydroxy-alminium ion. Environ. Eng. Res., 45, 139-145.
Keywords: polynuclear hydroxyl-Aluminium ion; diatom; complex ecological impact of coexistent metal cations
Strain(s): 487 
Satoh, H., Takeda, H. 1989 Detection and first characterization of a cell-wall lytic activity in Chlorella ellipsoidea C-27. Physiol. Plant., 77, 20-26.
Keywords: autolysis; cell wall; Chlorella; lytic activity
Strain(s): 2170 
Satoh, M., Iwamoto, K., Suzuki, I., et al. 2009 Cold stress stimulates intracellular calcification by the coccolithophore, Emiliania huxleyi (Haptophyceae) under phosphate-deficient conditions. Mar. Biotechnol., 11, 327-333.
Keywords: calcification; coccolith production; coccolithophore; cold stress; Emiliania huxleyi; phosphate deprivation
Strain(s): 837 
Sawada, K., Handa, N., Shiraiwa, Y., Danbara, A., Montani, S. 1996 Long-chain alkenones and alkyl alkenoates in the coastal and pelagic sediments of the northwest North Pacific, with special reference to reconstruction of Emiliania huxleyi and Gephyrocapsa oceanica ratios. Org. Geochem., 24, 751-764.
Keywords: alkenone, alkyl alkenoate; Uk'37; EE/K37; EE/K38; Emiliania huxleyi; Gephyrocapsa oceanica; coccolithophorid assemblage; northwest North Pacific sediment
Strain(s): 837838 
DOI: 10.1016/S0146-6380(96)00087-3
Sawada, K., Shiraiwa, Y. 2004 Alkenone and alkenoic acid compositions of the membrane fractions of Emiliania huxleyi. Phytochemistry, 65, 1299-1307.
Keywords: coccolithophorid; Emiliania huxleyi; Haptophyceae; alkenones; alkenoic acids; lipid biomarker; membrane fractionation; intracellular localization; unsaturation index
Strain(s): 837 
Scheibe, J. 1972 Photoreversible pigment: occurrence in a blue-green alga. Science, 176, 1037-1039.
Strain(s): 37 
PubMed: 17778430
DOI: 10.1126/science.176.4038.1037
Schoevaert, D., Krishnamswamy, S., Couturier, M., Marano, F. 1988 Ciliary beat and cell motility of Dunaliella: computer analysis of high speed microcinematography. Biol. Cell, 62, 229-240.
Strain(s): 2253 
Schulze, D., Robenek, H., McFadden, G. I., Melkonian, M. 1987 Immunolocalization of a Ca2+-modulated contractile protein in the flgellar apparatus of green algae: the nucleus-basal body connector. Eur. J. Cell Biol., 45, 51-61.
Strain(s): 2253 
Schwarze, P., Frandsen, N. O. 1960 Herstellung von Chlorella-Farbmutanten mit Hilfe von radioaktiven Isotopen. Naturwissenschaften, 47, 47.
Strain(s): 21612162 
Schwender, J., Gemünden, C., Lichtenthaler, H. K. 2001 Chlorophyta exclusively use the 1-deoxyxylulose 5-phosphate/2-C-methylerythritol 4-phosphate pathway for the biosynthesis of isoprenoids. Planta, 212, 416-423.
Keywords: Charophyta; 1-Deoxy-D-xylulose; Green alga; Isopentenyl diphosphate; Isoprenoid biosynthesis; Mevalonate
Strain(s): 296 
Sekiguchi, M., Ohtsuki, A., Shibata, Y., Morita, M. 1995 Arsenic compounds accumulated in phytoplanktons of marine origin. J. Environ. Chem. [Kankyô-Kagaku], 5, 366-367 (in Japanese with English title).
Strain(s): 16208 
Sekimoto, H. 2000 Intercellular communication during sexual reproduction of Closterium (Conjugatophyceae). J. Plant Res., 113, 343-352.
Keywords: chemotaxis; Closterium; conjugation; mating; sex pheromone; sexual reproduction
Strain(s): 6465228229 
Sekimoto, H. 2002 Production and secretion of a biologically active Closterium sex pheromone by Saccharomyces cerevisiae. Plant Physiol. Biochem., 40, 789-794.
Keywords: Closterium; conjugation; pheromone; PR-IP; sexual reproduction
Strain(s): 67 
Sekimoto, H. 2004 Molecular characterization of a novel sex pheromone, PR-IP inducer, in Closterium peracerosum-strigosum-littorale complex. Jpn. J. Phycol., 52, Suppl., 117-122.
Keywords: Closterium; conjugation; gamete mating; sex pheromone, sexual reproduction
Strain(s): 67 
Sekimoto, H., Fujii, T. 1991 Sexual reproduction of microalgae : its physiological and biochemical study. Cell Science, 7, 562-571 (in Japanese with English title).
Strain(s): 67 
Sekimoto, H., Fujii, T. 1992 Analysis of gametic protoplast release in the Closterium peracerosum-strigosum-littorale complex (Chlorophyta). J. Phycol., 28, 615-619.
Keywords: biologically active glycoprotein; Closterium peracerosum-strigosum-littorale complex; conjugation; gametic protoplast release
Strain(s): 67 
Sekimoto, H., Fukumoto, R. 1999 Sex pheromones in Closterium. Chem. Regul. Plant, 34, 305-315.
Strain(s): 646567 
Sekimoto, H., Fukumoto, R., Dohmae, N., Takio, K. Fujii, T., Kamiya, Y. 1998 Molecular cloning of a novel sex pheromone responsible for the release of a different sex pheromone in Closterium peracerosum-strigosum-littorale complex. Plant Cell Physiol., 39, 1169-1175.
Keywords: Clostreium; conjugation; gamete; mating; sex pheromone; sexual reproduction
Strain(s): 67 
Sekimoto, H., Satoh, S., Fujii, T. 1990 Biochemical and physiological properties of a protein inducing protoplast release during conjugation in the Closterium peracerosum-strigosum-littorale complex. Planta, 182, 348-354.
Keywords: Clostreium; conjugation (Closterium); glycoprotein; protoplast release in conjugation
Strain(s): 67 
Sekimoto, H., Satoh, S., Fujii, T. 1992 Biochemical and physiological properties of a gametic protoplast-release-inducing protein in Closterium. Korean J. Phycol., 7, 121-129.
Keywords: Clostreium; conjugation; glycoprotein; protoplast release in conjugation
Strain(s): 67 
Sekimoto, H., Satoh, S., Fujii, T. 1993 Analysis of binding of biotinylated protoplast-release-inducing protein that induces release of gametic protoplasts in the Closterium peracerosum-strigosum-littorale complex. Planta, 189, 468-474.
Keywords: Clostreium; conjugation (Closterium); protoplast-release; inducing protein; pheromone; receptor
Strain(s): 67 
Sekimoto, H., Sone, Y., Fujii, T. 1994 A cDNA encoding a 19-kilodalton subunit of protoplast-release-inducing protein from Closterium. Plant Physiol., 105, 447.
Strain(s): 67 
Sekimoto, H., Sone, Y., Fujii, T. 1994 cDNA cloning of a 42-kilodalton subunit of protoplast-release-inducing protein from Closterium. Plant Physiol., 104, 1095-1096.
Strain(s): 67 
Sekimoto, H., Sone, Y., Fujii, T. 1994 Regulation of expression of the genes for a sex pheromone by an inducer of the sex pheromone in the Closterium peracerosum-strigosum-littorale complex. Planta, 193, 137-144.
Keywords: Clostreium complex; inducer (of protoplast-release-inducing protein); pheromone; protoplast-release-inducing protein (PR-IP); sexual reproduction
Strain(s): 67 
Sekimoto, H., Sone, Y., Fujii, T. 1995 Biochemical, physiological, and molecular analysis of sexual isolation in the species complex Closterium peracerosum-strigosum-littorale (Chlorophyta). J. Phycol., 31, 611-615.
Keywords: Chlorophyta; Closterium peracerosum-strigosum-littorale complex; conjugation; pheromone; plotoplast-release-inducing protein (PR-IP); sexual isolation
Strain(s): 646567 
Sekimoto, H., Tanabe, Y., Takizawa, M., Ito, N., Fukumoto, R., Ito, M. 2003 Expressed sequence tags from Closterium peracerosum-strigosum-littorale complex, a unicellular charophycean alga, in the sexual reproduction process. DNA Res., 10, 147-153.
Keywords: Closterium; conjugation; EST; sexual reproduction
Strain(s): 67 
DOI: 10.1093/dnares/10.4.147
Sekimoto, H., Tanabe, Y., Tsuchikane, Y., Shirosaki, H., Fukuda,H., Demura, T., Ito, M. 2006 Gene expression profiling using cDNA microarray analysis of the sexual reproduction stage of the unicellular charophcean alga Closterium peracerosum-strigosum-littorale comples. Plant Physiol., 141, 271-279.
Strain(s): 67 
DOI: 10.1104/pp.116.078048
Sekino, K., Kobayashi, H., Shiraiwa, Y. 1996 Role of coccoliths in the utilization of inorganic carbon by a marine unicellular coccolithophorid, Emiliania huxleyi: a survey using intact cells and protoplasts. Plant Cell Physiol., 37, 123-127.
Keywords: calcification; coccolith; coccolithophorid; Emiliania huxleyi; inorganic carbon utilization; protoplast
Strain(s): 837 
Sekino, K., Shiraiwa, Y. 1994 Accumulation and utilization of dissolved inorganic carbon by a marine unicellular coccolithophorid, Emiliania huxleyi. Plant Cell Physiol., 35, 353-361.
Keywords: bicarbonate uptake; calcification; CO2 uptake; coccolithophorid; Emiliania huxleyi; inorganic carbon accumulation
Strain(s): 837 
Sekino, K., Shiraiwa, Y. 1995 CO2 release from the culture of calcifying and noncalcifying marine unicellular algae. J. Mar. Biotechnol., 3, 101-104.
Strain(s): 837 
Sekino, K., Shiraiwa, Y. 1996 Evidence for the involvement of mitochondrial respiration in calcification in a marine coccolithophorid, Emiliania huxleyi. Plant Cell Physiol., 37, 1030-1033.
Keywords: calcification; CO2 fixation; coccolithophorids; Emiliania huxleyi; mitochondrial respiration; photosynthesis
Strain(s): 837 
Seo, P-S., Yokota, A. 2003 The phylogenetic relationships of cyanobacteria inferred from 16S rRNA, gyrB, rpoC1 and rpoD1 gene sequences. J. Gen. Appl. Micobiol., 49, 191-203.
Keywords: cyanobacteria; gyrB; phylogeny; protein evolution; rpoC1; rpoD1; 16S rDNA
Strain(s): 192225392093209521283277 
Setohigashi, Y., Hamaji, T., Hayama, M., Matsuzaki, R., Nozaki, H. 2011 Uniparential inheritance of chloroplast DNA is strict in the isogamous volvocalean Gonium. PLoS One, 6, e19545 (article ID).
Strain(s): 24552457 
Sevilla, J. B., Nakajima, F., Kasuga, I. 2014 Comparison of aquatic and dietary exposure of heavy metals Cd, Cu, and Zn to benthic ostracod Heterocypris incongruens. Environ. Toxicol. Chem., 33, 1624-1630.
Keywords: Aqueous exposure; Heavy metal; Dietary exposure; Ostracod; Sediment
Strain(s): 2170 
Shao, J., He, Y., Li, F., Zhang, H., Chen, A., Luo, S., Gu, J.-D. 2016 Growth inhibition and possible mechanism of oleamide against the toxin-producing cyanobacterium Microcystis aeruginosa NIES-843. Ecotoxicology, 25, 225-233.
Keywords: Oleamide; Microcystis aeruginosa; Growth inhibition; Photosynthesis; Microcystins
Strain(s): 843 
DOI: 10.1007/s10646-015-1582-x
Shao, J., Jiang, Y., Wang, Z., Peng, L., Luo, S., Gu, J., Li, R. 2014 Interactions between algi