Search Reference

Ha, J. H., Hidaka, T., Tsuno, H. 2009 Quantification of toxic Microcystis and evolution of its dominance ratio in blooms using real-time PCR. Environ. Sci. Technol., 43, 812-818.
Strain(s): 102 
PubMed: 19245020
DOI: 10.1021/es801265f
Ha, K., Takamura, N., Jang, M.-H. 2009 Microcystin production by Microcystis aeruginosa exposed to phytoplanktivorous and omnivorous fish at different kairomone concentrations. Bull. Environ. Contam. Toxicol., 83, 761-765.
Keywords: microcystin; kairomone; Hypophthalmichthys molitrix; Carassius gibelio langsdorfi
Strain(s): 89103107 
Hagino, K., Bendif, E. M., Young, J. R. Kogame, K., Probert, I., Takano, Y., Horiguchi, T., de Vardas, C., Okada, H. 2011 New evidence for morphological and genetic variation in the cosmopolitan coccolithophore Emiliania huxleyi (Prymnesiophyceae) from the COX1b-ATP4 genes. J. Phycol., 47, 1164-1176.
Keywords: biogeography; coccolithophore; Emiliania huxleyi; mitochondrial DNA; morphotype
Strain(s): 83783810001311131213131314 
Hagiwara, T., Yagi, O., Takamura, Y., Sudo, R. 1984 Isolation of bacteria-free Microcystis aeruginosa from Lake Kasumigaura. Jpn. J. Water Poll. Res., 7, 437-442 (in Japanese with English summary).
Strain(s): 604 
Hamada, S., Sekimoto, H., Tanabe, Y., Tsuchikane, Y., Ito, M. 2006 Isolation of myosin XI genes from the Closterium peracerosum-strigosum-littorale complex and analysis of their expression during sexual reproduction. J. Plant Res., 119, 105-113.
Keywords: Closterium; Cytokinesis; Myosin XI; Real-time PCR; Sexual cell division; Sexual reproduction
Strain(s): 656768 
Hamaji, T., Ferris, J. P., Nishii, I., Nishimura, Y., Nozaki, H. 2013 Distribution of the sex-determining geneMID and molecular correspondence of mating types within the isogamous genus Gonium (Volvocales, Chlorophyta). PLoS One, 8, e64385 (article ID).
Strain(s): 6526536546558518521038103917081710171124552457 
PubMed: 23696888
DOI: 10.1371/journal.pone.0064385
Hamaji, T., Ferris, P. J., Coleman, A.W., Waffenschmidt, S., Takahashi, F., Nishii, I., Nozaki, H. 2008 Identification of the minus-dominance gene ortholog in the mating-type locus of Gonium pectorale. Genetics, 178, 283-294.
Strain(s): 17101711 
Hamaji, T., Mogi, Y., Ferris, P. J., Mori, T., Miyagishima, S., Kabeya, Y., Nishimura, Y., Toyoda, A., Noguchi, H., Fujiyama, A., Olson, B. J. S. C., Marriage, T. N., Nishii, I., Umen, J. G. Nozaki, H. 2016 Sequence of the Gonium pectorale mating locus reveals a complex and dynamic history of changes in volvocine algal mating haplotypes. G3-Genes Genomes Genet., 6, 1179-1189.
Keywords: Gonium; Chlamydomonas; Volvox; mating locus; evolution; Genetics of Sex
Strain(s): 2863 
DOI: 10.1534/g3.115.026229
Hamaji, T., Smith, DR., Noguchi, H., Toyoda, A., Suzuki, M., Kawai-Toyooka, H., Fujiyama, A., Nishii, I., Marriage, T., Olson, B. J. S. C., Nozaki, H. 2013 Mitochondrial and plastid genomes of the colonial green alga Gonium pectorale give insights into the origins of organelle DNA architecture within the Volvocales. PLoS One, 8, e57177 (article ID).
Strain(s): 2863 
PubMed: 23468928
DOI: 10.1371/journal.pone.0057177
Hamana, K. 2008 Cellular polyamines of phototrophs and beterotrophs belonging to the lower eukaryotic phyla Cercozoa, Euglenozoa, Heterokonta and Metamonada. J. Gen. Appl. Microbiol., 54, 135-140.
Keywords: cyanobacteria; homospermidine; polyamine; spermine; thermospermine
Strain(s): 9157186118253323330333548603621622100210031011104413031380144014431444 
Hamana, K., Aizaki T., Arai, E., Saito, A., Uchikata, K., Ohnishi, H. 2004 Distribution of norspermidine s a cellular polyamine within micro green algae including non-photosynthetic achlorophyllous Polytoma, Polytomella, Prototheca and Helicosporidium. J. Gen. Appl. Microbiol., 50, 289-295.
Keywords: Chlorophyta; green alga; Helicosporidium; norspermidine; polyamine; Polytoma; Polytomella; Prototheca
Strain(s): 18251254255296329483486536 
Hamana, K., Furuchi, T., Hayashi, H., Niitsu, M. 2016 Additional analysis of cyanobacterial polyamines ─ Distributions of spermidine, homospermidine, spermine, and thermospermine within the phylum Cyanobacteria. ─ Microb. Resour. Syst., 32, 179-186.
Keywords: cyanobacteria; homospermidine; polyamine; thermospermine
Strain(s): 208620872134241225393373 
Hamana, K., Furuchi, T., Nakamura, T., Hayashi, H., Niitsu, M. 2016 Occurrence of penta-amines, hexa-amines and N-methylated polyamines in unicellular eukaryotic organisms belonging to the phyla Heterokontophyta and Labyrinthulomycota of the subdomain Stramenopiles. J. Gen. Appl. Microbiol., 62, 320-325.
Keywords: Bioaccumulation; clam Corbicula leana; cyanotoxins; elimination; Microcystis
Strain(s): 2535 
DOI: 10.2323/jgam.2016.05.001
Hamana, K., Kobayashi, M., Yokota, A., Sekiguchi, H., Niitsu, M. 2008 Cellular polyamine profiles in cyanobacteria. Microbiol. Cult. Coll., 24, 3-8.
Keywords: cyanobacteria; homospermidine; polyamine; spermine; thermospermine
Strain(s): 26333646206208230267268305361416433434481507597598931932 
Hamana, K., Matsuzaki, S., Niitsu, M., Samejima, K., Nagashima, H. 1990 Polyamines of unicellular thermoacidophilic red alga Cyanidium caldarium. Phytochemistry, 29, 377-380.
Keywords: Cyanidium caldarium; Rhodophyta; red algae; polyamines; chemotaxonomy
Strain(s): 2137 
Hamana, K., Miyagawa, K., Matsuzaki, S. 1983 Occurrence of syn-homospermidine as the major polyamine in nitrogen-fixing cyanobacteria. Biochem. Biophys. Res. Commun., 112, 606-613.
Strain(s): 19373921293275 
Hamana, K., Niitsu, M. 2006 Cellular polyamines of lower eukaryotes belonging to the phyla Glaucophyta, Rhodophyta, Cryptophyta, Haptophyta and Percolozoa. J. Gen. Appl. Microbiol., 52, 235-240.
Keywords: Cryptophyta; Glaucophyta; Haptophyta; Perclozoa; polyamine; Rhodophyta
Strain(s): 827427627728235338869970671574176376410161017103210361332144114561457146214631467147315163377 
Hamana, K., Niitsu, M., Hayashi, H. 2013 Occurrence of homospermidine and thermospermine as a cellular polyamine in unicellular chlorophyte and multicellular charophyte green algae J. Gen. Appl. Micobiol., 59, 313-319.
Keywords: green alga; homospermidine; polyamine; thermospermine
Strain(s): 1815116025529630636036364072283614091410141114191837216421993374 
Hamana, K., Sakamoto, A., Nishina, M., Niitsu, M. 2004 Cellular polyamine profile of the phyla Dinophyta, Apicomplexa, Ciliophora, Euglenozoa, Cercozoa and Heterokonta. J. Gen. Appl. Microbiol., 50, 297-303.
Keywords: Apicomlexa; Cercozoa; Ciliophora; Dinophyta; Euglenozoa; Heterokonta; norspermidine; polyamine
Strain(s): 12286304331381387463 
Hanagata, N., Karube, I., Chihara, M., Silva, P. C. 1998 Reconsideration of the taxonomy of ellipsoidal species of Chlorella (Trebouxiophyceae, Chlorophyta), with establishment of Watanabea gen. nov. Phycol. Res., 46, 221-229.
Keywords: Chlorella saccharophila; ellipsoidal species of Chlorella; pyrenoid-lacking Chlorella-like algae: Watanabea gen. et sp. nov.
Strain(s): 2189 
Hanazato, T. 1991 Interrelations between Microcystis and Cladocera in the highly eutrophic Lake Kasumigaura, Japan. Int. Revue ges. Hydrobiol., 76, 21-36.
Keywords: Microcystis; Cladocera; toxicity; food chain; Lake Kasumigaura
Strain(s): 44298299 
Handa, S., Nakahara, M., Tsubota, H., Deguchi, H., Nakano, T. 2003 A new aerial alga, Stichococcus ampulliformis sp. nov. (Trebouxiophyceae, Chlorophyta) from Japan. Phycol. Res., 51, 203-210.
Keywords: aerial algae; molecular phylogeny; Stichococcus ampulliformis sp. nov.; Trebouxiophyceae; 18SrRNA gene
Strain(s): 996 
DOI: 10.1046/j.1440-1835.2003.00311.x
Hanschen, E. R., Ferris, P. J., Michod, R. E. 2014 Early evolution of the genetic basis for soma in the Volvocaceae. Evolution, 68, 2014-2025.
Keywords: Gene duplication; germ-soma differentiation; major transitions; multicellularity; regA; Volvox
Strain(s): 2739 
DOI: 10.1111/evo.12416
Hanschen, E.R., Marriage, T.N., Ferris, P.J., Hamaji, T., Toyoda, A., Fujiyama,A., Neme,R., Noguchi,H., Minakuchi, Y., Suzuki, M., Kawai-Toyooka, H., Smith, D.R., Sparks, H., Anderson, J., Bakaric, R., Luria, V., Karger, A., Kirschner, M.W., Durand, P.M., Michod, R.E., Nozaki, H., Olson, B.J. 2016 The Gonium pectorale genome demonstrates co-option of cell cycle regulation during the evolution of multicellularity. Nat. Commun., 7, 11370 (article ID).
Strain(s): 2863 
DOI: 10.1038/ncomms11370
Hara, Y. 1990 Chattonella ovata Y. Hara et Chihara mss. In Red Tide Organisms in Japan - An Illustrated Taxonomic Guide, Eds. by Fukuyo, Y., Takano, H., Chihara, M. & Matsuoka, K., Uchida Rokakuho, Tokyo, p. 340-341 (in Japanese with English summary).
Strain(s): 603 
Hara, Y., Chihara, M. 1982 Ultrastructure and taxonomy of Chattonella (Class Raphidophyceae) in Japan. Jpn. J. Phycol., 30, 47-56 (in Japanese with English summary).
Keywords: Chattonella; Chattonella marina comb. nov.; Raphidophyceae; red tides; taxonomy; ultrastructure
Strain(s): 161 
Hara, Y., Doi, K., Chihara, M. 1994 Four new species of Chattonella (Raphidophyceae, Chromophyta) from Japan. Jpn. J. Phycol. (Sôrui), 42, 407-420.
Keywords: Chattonella; C. globosa; C. minima; C. ovata; C. verruculosa; Raphidophyceae; red tide organisms; taxonomy
Strain(s): 118161603670849 
Hara, Y., Inouye, I., Chihara, M. 1985 Morphology and ultrastructure of Olisthodiscus luteus (Raphidophyceae) with special reference to the taxonomy. Bot. Mag. Tokyo, 98, 251-262.
Keywords: Heterosigma; Olisthodiscus luteus; Raphidophyceae; red tide flagellate; taxonomy of Olisthodiscus; ultrastructure of Olisthodiscus
Strain(s): 15 
Harada, K-I., Ozaki, K., Tsuzuki, S., Kato, H., Hasegawa, M., Kuroda, E. K., Arii, S., Tsuji, K. 2009 Blue color formation of cyanobacteria with b-cyclocitral. J. Chem. Ecol., 35, 1295-1301.
Keywords: b-cyclocitral; cyanobacteria; lysis; blue color formation; acid stress
Strain(s): 73102103112298611808 
Harashima, A., Watanabe, M., Fujishiro, I. 1988 Evolution of bioconvection patterns in a culture of motile flagellates. Phys. Fluids, 31, 764-775.
Strain(s): 6 
Hariganeya, N., Tanimoto, Y., Yamaguchi, H., Nishimura, T., Tawong, W., Sakanari, H., Yoshimatsu, T., Sato, S., Preston, C. M., Adachi, M. 2013 Quantitative PCR method for enumeration of cells of cryptic species of the toxic marine dinoflagellate Ostreopsis spp. in Coastal Waters of Japan. PLoS One, 8, e57627 (article ID).
Strain(s): 3353 
DOI: 10.1371/journal.pone.0057627
Harke, M. J., Berry, D. L., Ammerman, J. W., Gobler, C. J. 2012 Molecular response of the bloom-forming cyanobacterium, Microcystis aeruginosa, to phosphorus Limitation. Microb. Ecol., 63, 188-198.
Strain(s): 843 
PubMed: 21720829
DOI: 10.1007/s00248-011-9894-8
Harke, M. J., Jankowiak, J. G., Morrell, B. K., Gobler, C. J. 2016 Transcriptomic responses in the bloom-forming cyanobacterium Microcystis 2 induced during exposure to zooplankton. Appl. Environ. Microbiol., 83, e02832-16 (article ID).
Keywords: microcystis; RNA-Seq; transcriptome; grazing
Strain(s): 843 
PubMed: 28003198
DOI: 10.1128/AEM.02832-16
Hase, E., Mihara, S., Otsuka, H. 1959 An additional note on the nature of sulfur-containing peptide nucleotide complex obtained from Chlorella and yeast. J. Gen. Appl. Microbiol., 5, 43-50.
Strain(s): 2170 
Hase, E., Mihara, S., Otsuka, H., Tamiya, H. 1959 Sulfur-containing peptide-nucleotide complex isolated from Chlorella and yeast cells. Arch. Biochem. Biophys., 83, 170-177.
Strain(s): 2170 
Hase, E., Mihara, S., Tamiya, H. 1960 Role of sulfur in the cell division of Chlorella with special reference to the sulfur compounds appearing during the process of cell division. I. Plant Cell Physiol., 1, 131-142.
Strain(s): 2170 
Hase, E., Mihara, S., Tamiya, H. 1960 Some data on the nature of sulfur-containing peptide-nucleotide compounds obtained from Chlorella cells at different developmental stages in their life cycle. J. Gen. Appl. Microbiol., 6, 61-67.
Strain(s): 2170 
Hase, E., Mihara, S., Tamiya, H. 1960 Sulfur-containing deoxypentose polynucleotides obtained from Chlorella cells. Biochim. Biophys. Acta, 39, 381-382.
Strain(s): 2170 
Hase, E., Mihara, S., Tamiya, H. 1961 Capabilities of various sulfur substances in inducing the cell division of Chlorella arrested by sulfur deficiency. J. Gen. Appl. Microbiol., 7, 173-176.
Strain(s): 2170 
Hase, E., Mihara, S., Tamiya, H. 1961 Role of sulfur in the cell division of Chlorella with special reference to the sulfur compounds appearing during the process of cell division. II. Plant Cell Physiol., 2, 9-24.
Strain(s): 2170 
Hase, E., Miyachi, S., Mihara, S. 1963 A preliminary note on the phosphorus compounds in chloroplast and volutin granules isolated from Chlorella cells. Plant Cell Physiol., Spec. Iss. (Studies on Microalgae and Photosynthetic Bacteria), 619-626.
Strain(s): 2170 
Hase, E., Morimura, Y., Mihara, S., Tamiya, H. 1958 The role of sulfur in the cell division of Chlorella. Arch. Mikrobiol., 32, 87-95.
Strain(s): 2170 
Hase, E., Morimura, Y., Tamiya, H. 1957 Some data on the growth physiology of Chlorella studied by the technique of synchronous culture. Arch. Biochem. Biophys., 69, 149-165.
Strain(s): 2170 
Hase, E., Moriyama, Y., Tamiya, H. 1960 A short remark on the role of sulfur in the cell division of Chlorella. J. Gen. Appl. Microbiol., 6, 68-69.
Strain(s): 2170 
Hase, E., Otsuka, H., Mihara, S., Tamiya, H. 1959 Role of sulfur in the cell division of Chlorella, studied by the technique of synchronous culture. Biochim. Biophys. Acta, 35, 180-189.
Strain(s): 2170 
Hasegawa, H., Maki, T., Asano, K., Ueda, K., Ueda, K. 2004 Detection of iron(III)-binding ligands originating from marine phytoplankton using cathodic stripping voltammetry. Anal. Sci., 20, 89-93.
Strain(s): 116 
Hasegawa, M., Nishizawa, A., Tsuji, K., Kimura, S., Harada, K. 2012 Volatile organic compounds derived from 2-keto-acid decarboxylase in Microcystis aeruginosa. Microbes. Environ., 27, 525-528.
Keywords: cyanobacteria; volatile organic compounds; 3-methyl-1-butanol; 2-keto-acid decarboxylase; Microcystis
Strain(s): 843 
Hasegawa, M., Yoshida, T., Yabuta, M., Terazima, M., Kumazaki, S. 2011 Anti-Stokes fluorescence spectra of chloroplasts in Parachlorella kessleri and maize at room temperature as characterized by near-infrared continuous-wave laser fluorescence microscopy and absorption microscopy. J. Phys. Chem. B, 115, 4184-4194.
Strain(s): 2160 
Hashimoto, H., Murakami, S. 1982 Changes in morphology and ultrastructure of chloroplast along its division cycle in Euglena gracilis cultured synchronously under photoautotrophic condition. Scientific Papers of the College of General Education, Univ. of Tokyo, 32, 55-64.
Strain(s): 48 
Hashimoto, H., Murakami, S. 1982 Chloroplast replication and loss of chloroplast DNA induced by nalidixic acid in Euglena gracilis. Cell Struct. Funct., 7, 111-120.
Strain(s): 48 
Hashimoto, H., Murakami, S. 1983 Effects of cycloheximide and chloramphenicol on chloroplast replication in synchronously dividing cultured cells of Euglena gracilis. New Phytol., 94, 521-529.
Strain(s): 48 
Hasunuma, T., Kikuyama, F., Matsuda, M., Aikawa, S., Izumi, Y., Kondo, A. 2013 Dynamic metabolic profiling of cyanobacterial glycogen biosynthesis under conditions of nitrate depletion. J. Exp. Bot., 64, 2943-2954.
Keywords: 13C; cyanobacteria; glycogen; in vivo labelling; metabolic turnover; metabolomics
Strain(s): 39 
DOI: 10.1093/jxb/ert134
Hata, N., Ogbonna, J. C., Hasegawa, Y., Taroda, H., Tanaka, H. 2001 Production of astaxanthin by Haematococcus pluvialis in a sequential heterotrophic-photoautotrophic culture. J. Appl. Phycol., 13, 395-402.
Keywords: astaxanthin; carotenoids; Haematococcus pluvialis; heterotrophic; photoautotrophic; two phase culture
Strain(s): 144 
Hatakeyama, S., Fukushima, S., Kasai, F., Shiraishi, H. 1994 Assessment of herbicide effects on algal production in the Kokai River (Japan) using a model stream and Selenastrum bioassay. Ecotoxicology, 3, 143-156.
Keywords: herbicides; effects; algal production; algal community; channel carrying river water; bioassay; pesticide analysis
Strain(s): 35 
Hatano, S. 1978 Studies on frost hardiness in Chlorella ellipsoidea: Effects of antimetabolites, surfactants, hormones, and sugars on the hardening process in the light and dark. In Plant Cold Hardiness and Freezing Stress, Eds. by Li, P. H. & Sakai, A., Academic Press, New York, p. 175-196.
Strain(s): 2170 
Hatano, S., Akashi, H., Nogata, Y., Yoshimoto, M. 1987 Fatty acid synthetase system in relation to frost hardiness in Chlorella ellipsoidea. In Plant Cold Hardiness , Ed. by Li, P. H., Alan R. Liss, Inc., New York, p. 101-115.
Strain(s): 2170 
Hatano, S., Hara, Y., Takahashi, M. 1983 Preliminary study on the effects of photoperiod and nutrients on the vertical migratory behavior of a red tide flagellate, Heterosigma akashiwo. Jpn. J. Phycol., 31, 263-269 (in Japanese with English summary).
Keywords: Heterosigma akashiwo; nutrients; photoperiod; vertical migration
Strain(s): 6 
Hatano, S., Joh, T., Miyamoto, T., Yoshimoto, M. 1992 Preparation of protoplasts from Chlorella ellipsoidea C-27. Plant Cell Physiol., 33, 651-655.
Keywords: cell wall-lytic enzyme; chitosanase; Chlorella ellipsoidea C-27; protoplast
Strain(s): 2170 
Hatano, S., Kabata, K. 1982 Transition of lipid metabolksm in relation to frost hardiness in Chlorella ellipsoidea. In Plant Cold Hardiness and Freezing Stress, Eds. by Li, P. H. & Sakai, A., Academic Press, New York, p. 145-156.
Strain(s): 2170 
Hatano, S., Kabata, K., Sadakane, H. 1981 Transition of lipid synthesis from chloroplasts to a cytoplasmic system during hardening in Chlorella ellipsoidea. Plant Physiol., 67, 216-220.
Strain(s): 6872170 
Hatano, S., Kabata, K., Yoshimoto, M., Sadakane, H. 1982 Accumulation of free fatty acid during hardening of Chlorella ellipsoidea. Plant Physiol., 70, 1173-1177.
Strain(s): 2170 
Hatano, S., Sadakane, H., Tutumi, M., Watanabe, T. 1976 Studies on frost hardiness in Chlorella ellipsoidea. I. Development of frost hardiness of Chlorella ellipsoidea in cynchronous culture. Plant Cell Physiol., 17, 451-458.
Strain(s): 2170 
Hatano, S., Sadakane, H., Tutumi, M., Watanabe, T. 1976 Studies on frost hardiness in Chlorella ellipsoidea. II. Effects of inhibitors of RNA and protein synthesis and surfactants on the process of hardening. Plant Cell Physiol., 17, 643-651.
Strain(s): 2170 
Hattori, A. 1957 Studies on the metabolism of urea and other nitrogenous compounds in Chlorella ellipsoidea. J. Biochem., 44, 253-273.
Strain(s): 2170 
Hattori, A., Fujita, Y. 1959 Crystalline phycobilin chromoproteids obtained from a blue-green alga, Tolypothrix tenuis. J. Biochem., 46, 633-644.
Strain(s): 37 
Hattori, A., Fujita, Y. 1959 Effect of pre-illumination on the formation of phycobilin pigments in a blue-green alga, Tolypothrix tenuis. J. Biochem., 46, 1259-1261.
Strain(s): 37 
Hattori, A., Fujita, Y. 1959 Formation of phycobilin pigments in a blue-green alga, Tolypothrix tenuis, as induced by illumination with colored lights. J. Biochem., 46, 521-524.
Strain(s): 37 
Hattori, A., Fujita, Y. 1959 Spectroscopic studies on the phycobilin pigments obtained from blue-green and red algae. J. Biochem., 46, 903-909.
Strain(s): 37 
Hattori, A., Uesugi, I. 1968 Ferredoxin-dependent photoreduction of nitrate and nitrite by subcellular preparations of Anabaena cylindrica. In Comparative Biochemistry and Biophysics of Photosynthesis, Eds. by Shibata, K., et al., University of Tokyo Press, Tokyo, p. 201-205.
Strain(s): 19 
Hautala, H., Lamminmäki, U., Spoof, L., Nybom, S., Meriluoto, J., Vehniäinen, M. 2013 Quantitative PCR detection and improved sample preparation of microcystin-producing Anabaena, Microcystis and Planktothrix. Ecotox. Environ. Safe., 87, 49-56.
Keywords: Microcystin; Cyanobacteria; Quantitative PCR; mcyB; Sample prepararion
Strain(s): 107 
DOI: 10.1016/j.ecoenv.2012.10.008
Hayama, M., Nakada, T., Hamaji, T., Nozaki, H. 2010 Morphology, molecular phylogeny and taxonomy of Gonium maiaprilis sp. nov. (Goniaceae, Chlorophyta) from Japan. Phycologia, 49, 221-234.
Keywords: Chlorophyceae; Goniaceae; Gonium; Gonium maiaprilis sp. nov.; ITS; molecular phylogeny; morphology; rbcL; reproduction; taxonomy
Strain(s): 2455245624572458245924602461 
DOI: 10.2216/PH09-56.1
Hayashi, S., Jang, J. E., Itoh, K., Suyama, K., Yamamoto, H. 2011 Construction of river model biofilm for assessing pesticide effects. Arch. Environ. Contam. Toxicol., 60, 44-56.
Strain(s): 71489803 
Hayashi-Ishimaru, Y., Ehara, M., Inagaki, Y., Ohama, T. 1997 A deviant mitochondrial genetic code in prymnesiophytes (yellow-algae): UGA codon for tryptophan. Curr. Genet., 32, 296-299.
Keywords: Prymnesiophyta; deviant genetic code; cytochrome c oxidase subunit I; the codon-capture theory
Strain(s): 8353388 
Hayashi-Ishimaru, Y., Ohama, T., Kawatsu, Y., Nakamura, K., Osawa, S. 1996 UAG is a sense codon in several chlorophycean mitochondria. Curr. Genet., 30, 29-33.
Keywords: deviant genetic code; COXI; Chlorophyceaen mitochondria; release factor
Strain(s): 96209227415 
Hepperle, D., Nozaki, H., Hohenberger, S., Huss, V. A. R., Morita, E., Krienitz, L. 1998 Phylogenetic position of the Phacotaceae within the Chlamydophyceae as revealed by analysis of 18S rDNA and rbcL sequences. J. Mol. Evol., 47, 420-430.
Keywords: Phacotaceae; Volvocales; 18S rDNA phylogeny; lorica-bearing flagellates; green algae
Strain(s): 446858859861862 
DOI: 10.1007/PL00006399
Higashiyama, T., Yamada, T. 1991 Electrophoretic karyotyping and chromosomal gene mapping of Chlorella. Nucleic Acids Res., 19, 6191-6195.
Strain(s): 2163216621712189 
Hino, S. 1991 An examination of algal bioassay method for agricultural chemicals and heavy metals in a water environment. Hokkaido Kankyô Kagaku Kenkyû Sentâ Syohô, 18, 41-49 (in Japanese with English summary).
Strain(s): 228229 
Hirabaru, C., Izumo,A., Fujiwara, S., Tadokoro, Y., Shimonaga, T., Konishi, M., Yoshida, M., Fujita, N., Nakamura, Y., Yoshida, M., Kuroiwa, T., Tsuzuki, M. 2010 The primitive rhodophyte Cyanidioschyzon merolae contains a semiamylopectin-type, but not an amylose-type, α-glucan. Plant Cell Physiol., 51, 682-693.
Keywords: Amylose; Cyanidioschyzon; Floridean starch; Glycogen; Starch synthase; Semiamylopectin
Strain(s): 551 
Hirabayashi, R., Imamura, N. 2003 Action mechanism of a selective anti-cyanobacterial compound, argimicin A. J. Antibiotics, 56, 154-159.
Strain(s): 414581102204230298592 
Hirai, A., Nishimura, T., Iwamura, T. 1979 Synthetic rates of chloroplast and cytoplasmic ribosomal ribonucleic acids during the cell cycle of Chlorella. Plant Cell Physiol., 20, 93-102.
Keywords: cell cycle; Chlorella; chloroplast rRNA; cytoplasmic rRNA; RNA synthesis; radioisotopic precursor
Strain(s): 2170 
Hiraide, R., Kawai-Toyooka, H., Hamaji, T ., Matsuzaki, R., Kawafune, K., Abe, J., Sekimoto, H., Umen, J., Nozaki, H. 2013 The evolution of male–female sexual dimorphism predates the gender-based divergence of the mating locus gene MAT3/RB. Mol. Biol. Evol., 30, 1038-1040.
Keywords: gender-based divergence; gene conversion; male–female sexual dimorphism; MAT3/RB, mating type locus; volvocine algae
Strain(s): 7227338661710171117121859186139854018 
PubMed: 23364323
DOI: 10.1093/molbev/mst018
Hirano, H., Iguchi, M., Nishimura, T., Iwamura, T. 1986 Isolation of high molecular weight cellular DNA with a novel granulated hydroxyapatite. Agric. Biol. Chem., 50, 219-221.
Strain(s): 2170 
Hirano, H., Takeda, Y., Iwamura, T. 1986 Unique repetitive sequences of 170bp in Chlorella. Plant Mol. Biol., 7, 311-317.
Keywords: Chlorella; HaeIII family; repetitive sequence; tandem repeat
Strain(s): 21602170 
Hirano, M., Mori, H., Miura, Y., Matsunaga, N., Nakamura, N., Matsunaga, T. 1990 γ-linolenic acid production by microalgae. Appl. Biochem. Biotechnol., 24/25, 183-191.
Keywords: g-linolenic acid; Spirulina platensis; green algae; lipid; marine microalgae
Strain(s): 39 
Hirano, T., Masho, R., Koizumi, D., Tabata, S., Suzuki, K., Sakabe, M., Nakano, Y., Sato, N., Sudo, R. 2006 Ecotoxicity testing of bioremediation agents for shoreline oil-spill clean up. Jpn. J. Environ. Toxicol., 9, 115-131.
Keywords: ecotoxicity; bioremediation; oil-spill; acute toxicity; marine organisms
Strain(s): 324 
Hirashima, T., Tajima, N., Sato, N. 2016 Draft genome sequences of four species of Chlamydomonas containing phosphatidylcholine. GenomeA, 4, e01070-16 (article ID).
Strain(s): 2202220722122242 
DOI: 10.1128/genomeA.01070-16
Hirata, K., Phunchindawan, M., Tukamoto, J., Goda, S., Miyamoto, K. 1996 Cryopreservation of microalgae using encapsulation-dehydration. CryoLetters, 17, 321-328.
Keywords: Dunaliella tertiolecta; microalgae; cryopreservation; encapsulation-dehydration
Strain(s): 8192224273244242375396422437 
Hiroishi, S., Nakai, R., Seto, H., Yoshida, T., Imai, I. 2002 Identification of Heterocapsa circularisquama by means of antibody. Fish. Sci., 68, Suppl., 627-628.
Keywords: identification; Heterocapsa; dinoflagellate; antibody
Strain(s): 7235472473 
Hiroishi, S., Uchida, A., Nagasaki, K., Ishida, Y. 1988 A new method for identification of inter- and intra-species of the red tide algae Chattonella antiqua and Chattonella marina (Raphidophyceae) by means of monoclonal antibodies. J. Phycol., 24, 442-444.
Keywords: Chattonella; identification; immunofluorescence; inter-species; intra-species; method; monoclonal antibody; red tide
Strain(s): 121483848586113114115116118121 
Hiroishi, S., Uchida, A., Nagasaki, K., Ishida, Y. 1989 A new method for inter- and intra-species identification of red tide algae Chattonella antiqua and Chattonella marina by means of monoclonal antibodies. In Red Tides: Biology, Environmental Science, and Toxicology, Eds. by Okaichi, T., Anderson, D. M. & Nemoto, T., Elsevier Science Pub., New York, p. 299-300.
Strain(s): 8586118121 
Hirokawa, T., Hata, M., Takeda, H. 1982 Correlation between the starch level and the rate of starch synthesis during the developmental cycle of Chlorella ellipsoidea. Plant Cell Physiol., 23, 813-820.
Keywords: 14C-fixation; cell cycle; Chlorella ellipsoidea; photosynthesis; starch accumulation; starch synthesis; synchronous culture
Strain(s): 2170 
Hirokawa, T., Miyachi, S., Tamiya, H. 1958 Effect of hydrogen peroxide on the light-induced capacity of carbon dioxide-fixation in green algae. J. Biochem., 45, 1005-1010.
Strain(s): 2170 
Hirokawa, T., Takeda, H. 1980 Automatic analysing system for the liquid chromatography. J. Gen. Edu. Dept., Niigata Univ., 10, 97-106.
Strain(s): 2262170 
Hiroki, M., Shimizu, A., Li, R., Watanabe, M., Watanabe, M. M. 1998 Development of a database system useful for identification of Anabaena spp. (Cyanobacteria). Phycol. Res., 46, Suppl., 85-93.
Keywords: Anabaena; computer; cyanobacteria; database system; identification; morphology
Strain(s): 810819826835 
Hirooka, T., Akiyama, Y., Tsuji, N., Nakamura, T., Nagase, H., Hirata, K., Miyamoto, K. 2003 Removal of hazardous phenols by microalgae under photoautotrophic conditions. J. Biosci. Bioeng., 95, 200-203.
Keywords: green algae; cyanobacteria; nitrophenol; chlorophenol; bisphenol A; photoautotrophic conditions
Strain(s): 192344422437 
Hirosawa, T. 1984 Near-UV and blue light effects in cyanobacteria. In Blue Light Effects in Biological Systems, Ed. by Senger, H., Springer-Verlag, Berlin, p. 39-47.
Strain(s): 193720933277 
Hirose, M., Reiner, J. D., Hidaka, M., Suda, S. 2008 Phylogenetic analyses of potentially free-living Symbiodinium spp. Isolated from coral reef sand in Okinawa, Japan. Mar. Biol., 155, 105-112.
Strain(s): 263826392640264126422643 
Hirose, Y., Fujisawa, T., Ohtsubo, Y., Katayama, M., Misawa, N., Wakazuki, S., Shimura, Y., Nakamura, Y., Kawachi, M., Yoshikawa, H., Eki, T., Kanesaki, Y. 2016 Complete genome sequence of cyanobacterium Fischerella sp. NIES-3754, providing thermoresistant optogenetic tools. J. Biotechnol., 220, 45-46.
Keywords: Cyanobacteria; Genome; Photosensor; Thermophile
Strain(s): 3754 
DOI: 10.1016/j.jbiotec.2016.01.01
Hirose, Y., Fujisawa, T., Ohtsubo, Y., Katayama, M., Misawa, N., Wakazuki, S., Shimura, Y., Nakamura, Y., Kawachi, M., Yoshikawa, H., Eki, T., Kanesaki, Y. 2016 Complete genome sequence of cyanobacterium Leptolyngbya sp. NIES-3755. GenomeA, 4, e00090-16 (article ID).
Strain(s): 3755 
DOI: 10.1128/genomeA.00090-16
Hirose, Y., Fujisawa, T., Ohtsubo, Y., Katayama, M., Misawa, N., Wakazuki, S., Shimura, Y., Nakamura, Y., Kawachi, M., Yoshikawa, H., Eki, T., Kanesaki, Y. 2016 Complete genome sequence of cyanobacterium Nostoc sp. NIES-3756, a potentially useful strain for phytochrome-based bioengineering. J. Biotechnol., 218, 51-52.
Strain(s): 3756 
DOI: 10.1016/j.jbiotec.2015.12.002
Hirose, Y., Katayama, M., Ohtsubo, Y., Misawa, N., Iioka, E., Suda, W., Oshima, K., Hanaoka, M., Tanaka, K., Eki, T., Ikeuchi, M., Kikuchi, Y., Ishida, M., Hattori, M. 2015a Complete genome sequence of cyanobacterium Geminocystis sp. strain NIES-3708, which performs type II complementary chromatic acclimation. GenomeA, 3, e00357-15 (article ID).
Strain(s): 3708 
DOI: 10.1128/genomeA.00385-15
Hirose, Y., Katayama, M., Ohtsubo, Y., Misawa, N., Iioka, E., Suda, W., Oshima, K., Hanaoka, M., Tanaka, K., Eki, T., Ikeuchi, M., Kikuchi, Y., Ishida, M., Hattori, M. 2015b Complete genome sequence of cyanobacterium Geminocystis sp. strain NIES-3709, which harbors a phycoerythrin-rich phycobilisome. GenomeA, 3, e00385-15 (article ID).
Strain(s): 3709 
DOI: 10.1128/genomeA.00385-15
Hiwatari, T., Kasai, F., Watanabe, M. M., Nei, T. 1984 Cryopreservation of Scenedesmus acutus and Pediastrum duplex in liquid nitrogen - Survival and growth after freezing. Jpn. J. Freez. Dry., 30, 27-31 (in Japanese with English title).
Strain(s): 95213 
Hodoki, Y., Ohbayashi, K., Kobayashi, Y., Okuda, N., Nakano, S. 2012 Detection and identification of potentially toxic cyanobacteria: ubiquitous distribution of Microcystis aeruginosa and Cuspidothrix issatschenkoi in Japanese lakes. Harmful Algae, 16, 49-57.
Keywords: Anatoxin-a; Automated rRNA intergenic spacer analysis (ARISA); Cuspidothrix issatschenkoi; Cyanotoxin; Microcystin; Microcystis aeruginosa
Strain(s): 304077102111230512843905928932937991164516691698172919502116 
Hodoki, Y., Ohbayashi, K., Kobayashi, Y., Okuda, N., Nakano, S.-I. 2011 Temporal variation in cyanobacteria species composition and photosynthetic activity in experimentally induced blooms. J. Plankton Res., 33, 1410-1416.
Keywords: cyanobacterial bloom; DCMU [3'-(3,4-dichlorophenyl)-1',1'-dimethyl urea]; maximum quantum yieldMicrocystis aeruginosa
Strain(s): 843 
Hoef-Emden, K. 2012 Pitfalls of establishing DNA barcoding systems in protists: the cryptophyceae as a test case. PLoS One, 7, e43652 (article ID).
Strain(s): 27470670871171271371410041370 
Hoef-Emden, K. 2014 Osmotolerance in the Cryptophyceae: Jacks-of-all-trades in the Chroomonas clade. Protist, 165, 123-143.
Keywords: Chroomonas; contractile vacuole; cryptomonads; floridoside; osmolarity; osmoregulation; osmotolerance; phylogeny
Strain(s): 7087127137141004 
PubMed: 24568876
DOI: 10.1016/j.protis.2014.01.001
Hoef-Emden, K., Melkonian, M. 2003 Revision of the genus Cryptomonas (Cryptophyceae): a combination of molecular phylogeny and morphology provides insights into a long-hidden dimorphism. Protist, 154, 371-409.
Strain(s): 274276279 
DOI: 10.1078/143446103322454130
Hogetsu, D., Miyachi, S. 1970 Effect of oxygen on the light-enhanced dark carbon dioxide fixation in Chlorella cells. Plant Physiol., 45, 178-182.
Strain(s): 2170 
DOI: 10.1104/pp.45.2.178
Hogetsu, D., Miyachi, S. 1977 Effects of CO2 concentration during growth on subsequent photosynthetic CO2 fixation. Plant Cell Physiol., 18, 347-352.
Strain(s): 2160 
Hogetsu, D., Miyachi, S. 1979 Role of carbonic anhydrase in photosynthetic CO2 fixation in Chlorella. Plant Cell Physiol., 20, 747-756.
Keywords: carbonic anhydrase; Chlorella; CO2 fixation; photosynthesis; ribulose 1,5-bisphosphate carboxylase
Strain(s): 2160 
Honda, D., Yokota, A., Sugiyama, J. 1999 Detection of seven major evolutionary lineages in cyanobacteria based on the 16S rRNA gene sequence analysis with new sequences of five marine Synechococcus strains. J. Mol. Evol., 48, 723-739.
Keywords: cyanobacteria; Synechococcus; phylogeny; ribosomal RNA; maximum-likelihood method; neighbor-joining method; rate homo- and heterogeneous models
Strain(s): 27208510211621182119 
Honda, R., Boonnorat, J., Chiemchaisri, C., Chiemchaisri, w., Yamamoto, K. 2012 Carbon dioxide capture and nutrients removal utilizing treated sewage by concentrated microalgae cultivation in a membrane photobioreactor. Biores. Technol., 125, 59-64.
Keywords: Carbon dioxide capture; Nutrients removal; Membrane photobioreactor; Microalgae; Botryococcus braunii
Strain(s): 2199 
DOI: 10.1016/j.biortech.2012.08.138
Honda, R., Rukapan, W., Komura, H., Teraoka, Y., Noguchi, M., Hoek, E.M.V. 2015 Effects of membrane orientation on fouling characteristics of forward osmosis membrane in concentration of microalgae culture. Biores. Technol., 197, 429-433.
Keywords: Forward osmosis; Microalgae; Membrane fouling; Extracellular polymeric substances (EPS)
Strain(s): 2170 
DOI: 10.1016/j.biortech.2015.08.096
Hong, M. E., Choi, S. P., Park, Y. I., Kim, Y. K., Chang, W. S., Kim, B. W., Sim, S. J. 2012 Astaxanthin production by a highly photosensitive Haematococcus mutant. Process Biochem., 47, 1972–1979.
Keywords: Haematococcus pluvialis; Astaxanthin; Photo-inducible mutant; Photo-sensitivity
Strain(s): 144 
DOI: 10.1016/j.procbio.2012.07.007
Hong, M.-E., Choi, Y. Y., Sim, S. J. 2016 Effect of red cyst cell inoculation and iron (II) supplementation on autotrophic astaxanthin production by Haematococcus pluvialis under outdoor summer conditions. J. Biotechnol., 218, 25–33.
Keywords: Haematococcus pluvialis; Photoautotrophic culture; Astaxanthin; Summer outdoor conditions; Red cyst cell (aplanospore) inoculation method; Iron(Fe2+) supplementation method
Strain(s): 144 
DOI: 10.1016/j.jbiotec.2015.11.019
Honjo, M., Matsui, K., Ueki, M., Nakamura, R., Fuhrman, J. A., Kawabata, Z. 2006 Diversity of virus-like agents killing Microcystis aeruginosa in a hyper-eutrophic pond. J. Plankton Res., 28, 407-412.
Strain(s): 298 
Hori, K. Maruyama, F., Fujisawa, T., Togashi, T., Yamamoto, N., Seo, M., Sato, S., Yamada, T., Mori, H., Tajima, N., Moriyama, T., Ikeuchi, M., Watanabe, M., Wada, H., Kobayashi, K., Saito, M., Masuda, T., Sasaki-Sekimoto, Y., Mashiguchi, K., Awai, K., Shimojima, M., Masuda, S., Iwai, M., Nobusawa, T., Narise, T., Kondo, S., Saito, H., Sato, R., Murakawa, M., Ihara, Y., Oshima-Yamada, Y., Ohtaka, K., Satoh, M., Sonobe, K., Ishii, M., Ohtani, R., Kanamori-Sato, M., Honoki, R., Miyazaki, D., Mochizuki, H., Umetsu, J., Higashi, K., Shibata, D., Kamiya, Y., Sato, N., Nakamura, Y., Tabata, S., Ida, S., Kurokawa, K., Ohta, H. 2014 Klebsormidium flaccidum genome reveals primary factors for plant terrestrial adaptation. Nat. Commun., 5, 3978 (article ID).
Strain(s): 2285 
PubMed: 24865297
DOI: 10.1038/ncomms4978
Hori, S., Sekimoto, H., Abe, J. 2012 Properties of cell surface carbohydrates in sexual reproduction of the Closterium peracerosum–strigosum–littorale complex (Zygnematophyceae, Charophyta). Phycol. Res., 60, 254-260.
Keywords: cell-cell recognition; Closterium; ConcanavalinA; conjugation; lectin; Lycopersicon esculentum lectin; sexual reproduction
Strain(s): 6768 
Horiguchi, T. 1996 Haramonas dimorpha gen. et sp. nov. (Raphidophyceae), a new marine raphidophyte from Australian mangrove. Phycol. Res., 44, 143-150.
Keywords: Haramonas dimorpha gen et sp. nov.; mangrove; Raphidophyceae; taxonomy; tubular invagination; ultrastructure
Strain(s): 716 
Hoshina, R., Fujiwara, Y. 2013 Molecular characterization of Chlorella cultures of the National Institute for Environmental Studies culture collection with description of Micractinium inermum sp. nov., Didymogenes sphaerica sp. nov., Didymogenes soliella sp. nov., (Chlorellaceae, Trebouxiophyceae). Phycol. Res., 61, 124-132.
Keywords: Chlorella; Didymogenes; group 1 intron; internal transcribed spacer 2; Micractinium; species concept
Strain(s): 2167217121732330 
Hoshina, R., Imamura, N. 2008 Eu-Chlorella large subunit rDNA sequences and group I introns in ribosomal DNA of the paramecian symbiotic alga NC64A. Phycol. Res., 56, 21-32.
Keywords: Chlorella vulgaris; group I intron; intron phylogeny; intron transposition; large subunit ribosomal DNA; NC64A
Strain(s): 227 
Hoshina, R., Imamura, N. 2009 Phylogenetically close group I introns with different positions among Paramecium bursaria photobionts imply a primitive stage of intron diversification. Mol. Biol. Evol., 26, 1309-1319.
Keywords: degenerative homing; intron diversification; intron transposition; Paramecium bursaria symbiotic algae; reverse splicing
Strain(s): 2541 
PubMed: 19279084
DOI: 10.1093/molbev/msp044
Hoshina, R., Kamako, S.-I., Imamura, N. 2004 Phylogenetic position of endosymbiotic green algae in Paramecium bursaria Ehrenberg from Japan. Plant Biol., 6, 447-453.
Keywords: 18S rDNA; Chlorella; endosymbiont; ITS; Paramecium bursaria; phylogeny
Strain(s): 25402541 
Hoshina, R., Kato, Y., Kamako, S., Imamura, N. 2005 Genetic evidence of "American" and "European" type symbiotic algae of Paramecium bursaria Ehrenberg. Plant Biol., 7, 526-532.
Keywords: 18S rDNA; "American"; "European"; Chlorella; ITS; Paramecium bursaria; Phylogeny
Strain(s): 25402541 
Hosoi-Tanabe, S., Honda, D., Fukaya, S., Otake, I., Inagaki, Y., Sako, Y. 2007 Proposal of Pseudochattonella verruculosa gen. nov., comb. nov. (Dictyochophyceae) for a formar rephidophycean alga Chattonella verruculosa, based on 18S rDNA phylogeny and ultrastructural characteristics. Phycol. Res., 55, 185-192.
Keywords: Chatonella verruculosa; Dictyochophyceae; flagellar apparatus; harmful algal bloom; phylogenetic analysis; Pseudochattonella verruculosa; Raphidophyceae
Strain(s): 670 
Hosoi-Tanabe, S., Otake, I., Sako, Y. 2006 Phylogenetic analysis of noxious red tide flagellates Chattonella antiqua, C. marina, C. ovata, and C. verruculosa (Raphidophyceae) based on the rRNA gene family. Fish. Sci., 72, 1200-1208.
Keywords: Chattonella; genetic homogeneity; phylogenetic analysis; Raphidophyceae; rRNA gene family
Strain(s): 1586121145558559603670 
DOI: 10.1111/j.1444-2906.2006.01277.x
Hosoi-Tanabe, S., Sako, Y. 2005 Species-specific detection and quantification of toxic marine Dinoflagellates Alexandrium tamarense and A. catenella by reai-time PCR assay. Mar. Biotechnol., 7, 506-514.
Keywords: toxic dinoflagellate; — Alexandrium; paralytic shellfish poisoning (PSP); real-time PCR; species-specific identification; quantification
Strain(s): 1712293331559603670 
Hosokawa, Y., Miki-Noumura, T. 1987 Bending motion of Chlamydomonas axonemes after extrusion of central-pair microtubules. J. Cell Biol., 105, 1297-1301.
Strain(s): 2239 
Hosomi, M., Sudo, R. 1979 Studies on the effects of sediments on algal growth - Algal growth potential of sediments. Res. Rep. Natl. Inst. Environ. Stud., No. 6, 115-121 (in Japanese with English summary).
Strain(s): 35 
Hosoya, R., Hamana, K., Isobe, M., Yokota, A. 2005 Polyamine distribution profiles within Cyanobacteria. Microbiol. Cult. Coll., 21, 3-8.
Keywords: cyanobacteria; homospermidine; polyamine; spermidine
Strain(s): 41507378798081512515592593610846847 
Houdai, T., Matsuoka, S., Matsumori, N., Murata, M. 2004 Membrane-permeabilizing activities of amphidinol 3, polyene-polyhydroxy antifungal from a marine dinoflagellate. Biochem. Biophys. Acta, 1667, 91-100.
Keywords: amphidinol; Amphidinium klebsii; amphotericin B
Strain(s): 613 
Houdai, T., Matsuoka, S., Morsy, N., Matsumori, N., Satake, M., Murata, M. 2005 Hairpin conformation of amphidinols possibly accounting for potent membrane permeabilizing activities. Tetrahedron, 61, 2795-2802.
Keywords: amphidinol membrane-permeabilizaion
Strain(s): 613 
Houdai, T., Matsuoka, S., Murata, M., Satake, M., Ota, S., Oshima, Y., Rhodes, L. L. 2001 Acetate labeling patterns of dinoflagellate polyketides, amphidinols 2, 3 and 4 Tetrahedron, 57, 5551-5555.
Keywords: dinoflagellate; polyketides; biosynthesis; amphidinol; Amphidinium; isotopic labelling
Strain(s): 613 
Houndan, A., Billard, C., Marie, D., Not, F., Sáez, A. G., Young, J. R., Probert, I. 2003 Holococcolithophore-heterococcolithophore (Haptophyta) life cycles: flow cytometric analysis of relative ploidy levels. Systematics and Biodiversity, 4, 453-465.
Keywords: Coccolithophore; haplo-diploid; Haptophyta; heterococcolith; holococcolith; life cycle; microalgae; ploidy
Strain(s): 26942697 
Howe, A. T., Bass, D., Vickerman, K., Chao, E. E., Cavalier-Smith, T. 2009 Phylogeny, taxonomy, and astounding genetic diversity of Glissomonadida ord. nov., the dominant gliding zooflagellates in soil (Protozoa: Cercozoa). Protist, 160, 159-189.
Keywords: Glissomonadida; Sandonidae; Allapsidae; Bodomorphidae; Heteromita; phylogeny
Strain(s): 241424152417241824192421242224232424242524262427242824292430 
Hu, ZY., Li, YT., Sommerfeld, M., Chen, F., Hu, Q. 2008 Enhanced protection against oxidative stress in an astaxanthin-overproduction Haematococcus mutant (Chlorophyceae). Eur. J. Phycol., 43, 365-376.
Keywords: astaxanthin; carotenogenesis; flow cytometry; Haematococcus pluvialis; oxidative stress; pigment mutant
Strain(s): 144 
Hua, JM., Smith, D. R., Borza, T., Lee, R. W. 2012 Similar relative mutation rates in the three genetic compartments of Mesostigma and Chlamydomonas. Protist, 163, 105-115.
Keywords: Chlamydomonas; genome architecture; Mesostigma; mutation rate; silent substitution rate
Strain(s): 296476 
PubMed: 21621456
DOI: 10.1016/j.protis.2011.04.003
Huang, Y., Lee, H., Lai, C. 2013 Engineering of the growth environment of microalgae with high biomass and lipid productivity. J. Nanosci. Nanotechnol., 13, 2117-2121.
Keywords: Microalgae; Cultivation Environment; Carbon Dioxide; Biomass Productivity; Lipid Productivity
Strain(s): 2199 
DOI: 10.1166/jnn.2013.6877
Huang, Y.-T., Su, C.-P. 2014 High lipid content and productivity of microalgae cultivating under elevated carbon dioxide. Int. J. Environ. Sci. Technol., 11, 703-710.
Keywords: Biodiesel; Chlorella; Global warming; Light intensity
Strain(s): 2173 
DOI: 10.1007/s13762-013-0251-y
Huss, V. A. R., Wein, K. H., Kessler, E. 1988 Deoxyribonucleic acid reassociation in the taxonomy of the genus Chlorella. Arch. Mikrobiol., 150, 509-511.
Strain(s): 2163 
Handa, S., Shoda, I., Mizobuchi, A., Nakahara-Tsubota, M., Tsubota, H. 2014 Trentepohlia bosseae var. samoensis (Trentepohliaceae, Ulvophyceae), an aerial alga newly found in Japan. J. Jpn. Bot., 89, 59-64 (in Japanese with English summary).
Keywords: central pit; green alga: Japan; morphology; new record; Phycopeltis; Printzina; Trentepohlia
Strain(s): 335833593360 
Hatakeyama, S. 2006 Assessment of overall herbicide effects on river ecosystems through periphyton and aquatic plants. Jpn. J. Environ. Toxicol., 9, 51-60 (in Japanese with English title).
Strain(s): 35 
Hamasaki, A. 2017 Study of the optimal cultivation for micro-algae. 第12回バイオマス科学会議発表論文集, 27-28 (in Japanese with English summary).
Strain(s): 226 
DOI: 10.20550/jiebiomassronbun.12.0_27
Hirato, Y., Goto, M., Tokuhisa, M., Tanigawa, M., Nishimura, K. 2017 Crystallization and X-ray analysis of D-threonine aldolase from Chlamydomonas reinhardtii. Acta Crystallogr. F-Struct. Biol., F73, 86-89.
Keywords: D-threonine aldolase; Chlamydomonas reinhardtii; D-amino acids; crystallization
Strain(s): 2237 
PubMed: 28177318
DOI: 10.1107/S2053230X1602063X
Hirashima, T., Toyoshima, M., Moriyama, T., Nakamura, Y., Sato, N. 2017 Characterization of phosphoethanolamine-N-methyltransferases in green algae. Biochem. Biophys. Res. Commun., 488, 141-146.
Keywords: Green algal evolution; Chlamydomonas; Phosphatidylcholine biosynthesis; Phosphoethanolamine-N-methyltransferase
Strain(s): 22022207221222352242 
PubMed: 2848352
DOI: 10.1016/j.bbrc.2017.05.026
Honda, R., Teraokab, Y., Noguchia, M., Yang, S. 2017 Optimization of hydraulic retention time and biomass concentration in microalgae biomass production from treated sewage with a membrane photobioreactor. J. Water Environ. Technol., 15, 1-11.
Keywords: membrane photobioreactor; microalgae; resource recovery from wastewater
Strain(s): 2170 
DOI: 10.2965/jwet.15-085
Hamaji, T., Kawai-Toyooka, H., Toyoda, A., Minakuchi, Y., Suzuki, M., Fujiyama, A., Nozaki, H., Smith, D. R. 2017 Multiple independent changes in mitochondrial genome conformation in chlamydomonadalean algae. Genome Biol. Evol., 9, 993-999.
Keywords: Eudorina; linear mitochondrial DNA; telomere; Volvox; Yamagishiella
Strain(s): 39823984 
DOI: 10.1093/gbe/evx060
Hirato, Y., Tokuhisa, M., Tanigawa, M., Ashida, H., Tanaka, H., Nishimura, K. 2017 Cloning and characterization of d-threonine aldolase from the green alga Chlamydomonas reinhardtii. Phytochemistry, 135, 18-23.
Keywords: Chlamydomonas reinhardtii; Chlamydomonadaceae; Green alga; Enzyme characterization; d-Amino acid; d-Threonine aldolase; Pyridoxal 5’-phosphate
Strain(s): 2237 
PubMed: 28038776
DOI: 10.1016/j.phytochem.2016.12.012
Hong, M., Choi, S. P., Park, Y., Kim, Y., Chang, W. S., Kim, B. W., Sim, S. J. 2017 Development of a chronic sediment toxicity test using the benthic ostracod Heterocypris incongruens and their application to toxicity assessments of urban road dust. Ecotox. Environ. Safe., 143, 266-274.
Keywords: Chronic sediment toxicity test; Heterocypris incongruens; Test repeatability; Reproduction; Urban road dust
Strain(s): 94 
DOI: 10.1016/j.ecoenv.2017.05.011

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